>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 1 (SWI/SNF complex 155
            kDa subunit) (BRG1-associated factor 155) (SWI3-related
            protein)
          Length = 1104

 Score = 32.3 bits (72), Expect(2) = 0.018
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
 Frame = +1

Query: 22   HGTTPDETRRDETGSESIP-----NPTQRSHWRRPPHLLGFHSPPPTHP 153
            HG TP +  +   G    P     +P    H + PP+ L  H  PP HP
Sbjct: 963  HGQTPQQAHQHTGGPGMAPLGATGHPGMMPHQQPPPYPLMHHQMPPPHP 1011



 Score = 24.6 bits (52), Expect(2) = 0.018
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 147  PPASPIQPGAWPTPTTCWPG 206
            PP  P QPG  P P +  PG
Sbjct: 1007 PPPHPPQPGQIPGPGSMMPG 1026

>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 1 (SWI/SNF complex 155
            kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 30.4 bits (67), Expect(2) = 0.063
 Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
 Frame = +1

Query: 22   HGTTPDETRRDETGSESIP-----NPTQRSHWRRPPHLLGFHSPPPTHP 153
            HG  P +  +   G    P     +P    H + PP+ L  H  PP HP
Sbjct: 963  HGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHP 1011



 Score = 24.6 bits (52), Expect(2) = 0.063
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 147  PPASPIQPGAWPTPTTCWPG 206
            PP  P QPG  P P +  PG
Sbjct: 1007 PPPHPPQPGQIPGPGSMMPG 1026

>DMD_MOUSE (P11531) Dystrophin|
          Length = 3678

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 332  YLSPSFHYYSLTHARTQLEENSRLKEELMRKTTELNIIVNTSIQPISH 475
            YL   F Y +    +T +EE  R KEE ++K T++ ++  T    I+H
Sbjct: 1182 YLERDFEYKTPDELQTAVEEMKRAKEEALQKETKVKLLTETVNSVIAH 1229

>MANS1_HUMAN (Q9H8J5) MANSC domain containing protein 1 precursor|
          Length = 431

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = +3

Query: 6   LVSFESRNHSRRDETRRDGERIH--PQSHAAQPLEEATASPRVSFASPHPPASPIQPGAW 179
           L++++ + HS+  +   D E  H  P++ +A P   A ASP  + A+P  PA+ +   A 
Sbjct: 195 LLAYKEKGHSQSSQFSSDQEIAHLLPENVSALPATVAVASPHTTSATP-KPATLLPTNAS 253

Query: 180 PTPT 191
            TP+
Sbjct: 254 VTPS 257

>GLUQ_RHOBA (Q7UHE2) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)|
          Length = 329

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +3

Query: 42  DETRR---DGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPG 173
           DE R    D +R++P S   + +E A ++P  S AS   P +P+ PG
Sbjct: 85  DEARNQLMDADRVYPCSCTRRDIEAAASAPHESEASGWTPDAPVYPG 131

>CI123_HUMAN (Q96GE9) Protein C9orf123|
          Length = 116

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
 Frame = +3

Query: 81  SHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTPT------TCW 200
           S  +QP E    +P  + A+P  PA P  PGA  +P       TCW
Sbjct: 3   SRLSQPFESYITAPPGTAAAPAKPAPPATPGAPTSPAEHRLLKTCW 48

>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene|
           AF4) (FEL protein)
          Length = 1210

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 27  NHSRRDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTPTT 194
           +H ++ + R DG+     + +A    E   SP +S  SP PP SPI       P T
Sbjct: 172 SHHKKGDRRADGDHCASVTDSAP---ERELSPLISLPSPVPPLSPIHSNQQTLPRT 224

>HMH2_DROME (P10035) Homeobox protein H2.0|
          Length = 418

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 403 QGRADAQDHRAQHHRKHIHPTNLSPPH 483
           Q +   Q H  QHH KH+H  +  PPH
Sbjct: 192 QKQQHQQHHHHQHHPKHLHQQHKPPPH 218

>MTRM_DROYA (P83733) Protein matrimony (Cell cycle arrest protein D52)|
          Length = 219

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +1

Query: 400 PQGRADAQDHRAQHHR---KHIHPTNLSPPHY 486
           P  +A    H+ QHH    KHIH T L PP +
Sbjct: 74  PPAKAHPHPHQHQHHHHHHKHIHRTQLKPPPF 105

>TNR1A_BOVIN (O19131) Tumor necrosis factor receptor superfamily member 1A|
           precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55)
          Length = 471

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 27/99 (27%), Positives = 31/99 (31%)
 Frame = +3

Query: 108 ATASPRVSFASPHPPASPIQPGAWPTPTTCWPGGXXXXXXXXXXXXXXXXXXXXXXXXXQ 287
           A ASP    A PH  A PI PG   +   C PG                           
Sbjct: 299 AVASPSSETAPPHLKAGPILPGPPASTHLCTPG--------------------------- 331

Query: 288 QSDTRSGPLSHRLHSIYPPPSITTHSLTPARSWRRTAAS 404
                  P S   H   P P  +TH  TP + W  +A S
Sbjct: 332 ------PPAS--THLCTPGPPASTHLCTPVQKWEASAPS 362

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +3

Query: 30  HSRRDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTPT 191
           H +     ++ + + PQ   + P   +   P VS    +PP +   PG  PTPT
Sbjct: 93  HQQPPPPPQESKPVVPQGPGSAPGVSSAPPPAVSAPPANPPTTGAPPGPGPTPT 146

>NR2F1_BRARE (Q06725) Nuclear receptor Nr2f1 (Steroid receptor homolog SVP 44)|
          Length = 411

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +3

Query: 87  AAQPLEEATASPRVSFASPHPPASPIQPGAWPTPTTCWPGG 209
           AAQP  E     + + A+PH P +P QPG   TP T    G
Sbjct: 26  AAQPARE---QQQAASAAPHTPQTPSQPGPPSTPGTAGDKG 63

>Y091_NPVAC (P41479) Hypothetical 24.1 kDa protein in LEF4-P33 intergenic|
           region
          Length = 224

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +3

Query: 75  PQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTP 188
           P S    PL     +P  S  SP PP +PI P   PTP
Sbjct: 43  PTSPPIVPLPTPPPTPTPSPPSPTPPPTPIPPTPTPTP 80

>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)|
           (Oncogene GLI)
          Length = 1106

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +3

Query: 21  SRNHSRRDETRRDGERI--HPQSHAAQPLEEA-TASPRVSFASPHPPASPIQPGAWPTP 188
           S +H+    +RR G  +    +S ++  +  A T S R S ASP PP SP + GA   P
Sbjct: 521 SLSHTGTTVSRRVGPPVSLERRSSSSSSISSAYTVSRRSSLASPFPPGSPPENGASSLP 579

>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 76  PNPTQRSHWRRPPHLLGFHSPPPTH 150
           P P+Q++H   PPH    H PPP H
Sbjct: 636 PPPSQKNHQPPPPH----HQPPPPH 656

>MNT_MOUSE (O08789) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 591

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +3

Query: 39  RDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTPTTCWP 203
           R++ ++    +   +HA    E    +P +  + P PP +P  P A P P T  P
Sbjct: 38  REQEQKRASNLARLAHALPVEEPRIEAPPLPLSPPAPPPAPPPPLATPAPLTVIP 92

>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 75  PQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTP 188
           P S  ++P   +T  P +   +P PP  P +PG  P P
Sbjct: 277 PPSQTSKPPVPSTPRPGLGSQAPPPPPPPSRPGPPPLP 314

>SEN2_NEUCR (Q9P6Y2) Probable tRNA-splicing endonuclease subunit sen-2 (EC|
           3.1.27.9) (tRNA-intron endonuclease sen-2)
          Length = 633

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
 Frame = +3

Query: 18  ESRNHSRRDETRR--------DGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQP 170
           E R  SRR+E R+        + E I  Q H    L   T    V+ A P PPA+ I+P
Sbjct: 150 EERTASRREERRQVKWERAKAELEAIEKQKHEEAKLNSET----VNAAIPEPPAAEIEP 204

>PAPPA_MOUSE (Q8R4K8) Pappalysin-1 precursor (EC 3.4.24.79)|
           (Pregnancy-associated plasma protein-A) (PAPP-A)
           (Insulin-like growth factor-dependent IGF-binding
           protein 4 protease) (IGF-dependent IGFBP-4 protease)
           (IGFBP-4ase)
          Length = 1624

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +3

Query: 36  RRDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAW 179
           R    RRD   + P   AA P   AT + R   ASP PP      GAW
Sbjct: 24  RPRRVRRDPRAVRPPRPAAGPATCATRAARGRRASPPPPPG----GAW 67

>MANS1_MACFA (Q95KG7) MANSC domain containing protein 1 precursor|
          Length = 431

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 6   LVSFESRNHSRRDETRRDGERIH--PQSHAAQPLEEATASPRVSFASPHP 149
           L+ ++ + HS+  +   D E  H  P++ +  P   A ASP  + A+P P
Sbjct: 195 LLVYKEKGHSQSSQISSDQEIAHLLPENVSVFPATVAVASPHTTSATPKP 244

>PAPPA_HUMAN (Q13219) Pappalysin-1 precursor (EC 3.4.24.79)|
           (Pregnancy-associated plasma protein-A) (PAPP-A)
           (Insulin-like growth factor-dependent IGF-binding
           protein 4 protease) (IGF-dependent IGFBP-4 protease)
           (IGFBP-4ase)
          Length = 1628

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 20/48 (41%), Positives = 21/48 (43%)
 Frame = +3

Query: 36  RRDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAW 179
           R    RRD     P   AA P   AT + R   ASP PP  P   GAW
Sbjct: 24  RPRRARRDPRAGRPPRPAAGPATCATRAARGRRASPPPPPPP--GGAW 69

>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 54  RDGERIHPQSHAAQPLEEATASPRVSFASPHPPA 155
           +  ERIH Q  A Q  + A AS   +   PHPPA
Sbjct: 164 KKSERIHQQRQAYQQRQLARASHASTQPPPHPPA 197

>ADDA_MOUSE (Q9QYC0) Alpha-adducin (Erythrocyte adducin alpha subunit)|
          Length = 735

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/56 (32%), Positives = 22/56 (39%)
 Frame = +3

Query: 18  ESRNHSRRDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPT 185
           E   H+  D T+   E     + A  P  E  ASP     SP  P S   PG  P+
Sbjct: 659 EEEAHASPDPTQPPAEADPEPASAPTPGAEEVASPATEEGSPMDPGSDGSPGKSPS 714

>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 36   RRDETRRDGERIHPQSHAAQ-PLEEATASPRVSFASPHPPASPIQPGAWPTPTTCWPG 206
            ++   RR G+ + P+    Q P+    AS  ++  +P P  +PI P   P P T  PG
Sbjct: 1244 KKPTLRRTGKPMLPEEQCEQQPVHFTMASQEMNLETPPPITAPIPP--VPKPRTFQPG 1299

>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 582

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +3

Query: 24  RNHSRRDETRRDGERIHPQSHAAQPLEEATASPRVSFASPHPPASPIQPGAWPTPTTCWP 203
           R    R++ ++    +   +H     E    +P +  + P PP +P  P A P P T  P
Sbjct: 31  RLEQEREQEQKKANSLARLAHTLPVEEPRMEAPPLPLSPPAPPPAPPPPLATPAPLTVIP 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.131    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,273,477
Number of Sequences: 219361
Number of extensions: 1296534
Number of successful extensions: 5597
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5533
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)