ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17d09 |
|---|---|
| Clone Library Name | barley_pub |
>TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50)| Length = 368 Score = 60.5 bits (145), Expect = 3e-09 Identities = 31/107 (28%), Positives = 49/107 (45%) Frame = +1 Query: 70 RPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGH 249 + Q H G + G SF + W+ EQS + LV+ L H Sbjct: 137 KQQGHLGPSGSINTGIASFEMEYSHWLQEQSRRVSELRTALQSHISDIELKMLVESCLNH 196 Query: 250 YENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 390 Y N ++ KS AA ADV + + W ++TE + W GG+RP+ + ++ Sbjct: 197 YANLFQMKSDAAKADVFYLISGMWRTSTERFFQWIGGFRPSELLNVV 243
>TGA1A_TOBAC (P14232) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a)| (ASF-1 protein) Length = 359 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/108 (29%), Positives = 51/108 (47%) Frame = +1 Query: 103 ASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAA 282 AS G F + W+ EQ+ R +VD L HY + +R K+ A Sbjct: 139 ASSGTAVFDMEYGHWVEEQTRQTNDLRIALHSQIGEAELRIIVDGYLNHYFDLFRMKATA 198 Query: 283 ASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLLYSKSGVQLEAQL 426 A ADVL + + W ++ E ++W GG+RP+ +++L + E QL Sbjct: 199 AKADVLYIMSGMWKTSAERFFMWIGGFRPSELLKVLTPHLELLTEQQL 246
>TGA2_ARATH (P43273) Transcription factor TGA2 (HBP-1b homolog) (AHBP-1b)| (AtbZIP20) Length = 330 Score = 58.2 bits (139), Expect = 1e-08 Identities = 37/140 (26%), Positives = 58/140 (41%) Frame = +1 Query: 7 TSTNSYAQGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXX 186 T Q AR + ++ T H G +G +F W+ E++ Sbjct: 80 TQLEQELQRARQQGVFISGTGDQAHSTGG-----NGALAFDAEHSRWLEEKNKQMNELRS 134 Query: 187 XXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWR 366 R +VD V+ HYE +R KS AA DV + + W + E +LW GG+R Sbjct: 135 ALNAHAGDSELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFR 194 Query: 367 PTAAVQLLYSKSGVQLEAQL 426 + ++LL ++ E QL Sbjct: 195 SSELLKLLANQLEPMTERQL 214
>HBP1B_WHEAT (P23923) Transcription factor HBP-1b(c38)| Length = 332 Score = 57.8 bits (138), Expect = 2e-08 Identities = 33/140 (23%), Positives = 63/140 (45%) Frame = +1 Query: 7 TSTNSYAQGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXX 186 T Q AR I +++++ H + + +G +F + W+ E + Sbjct: 80 TQLEQELQRARQQGIFISSSADQSH-----SMSGNGALAFDTEYARWLEEHNRQVNELRA 134 Query: 187 XXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWR 366 R +V++++ HY+ ++ K AA ADV + + W + E +LW GG+R Sbjct: 135 AVNAHAGDTELRSVVEKIMSHYDEIFKQKGNAAKADVFHVLSGMWKTPAERCFLWLGGFR 194 Query: 367 PTAAVQLLYSKSGVQLEAQL 426 P+ ++LL ++ E QL Sbjct: 195 PSELLKLLSTQLEPLTEQQL 214
>TGA5_ARATH (Q39163) Transcription factor TGA5 (Ocs element-binding factor 5)| (OBF5) (AtbZIP26) Length = 330 Score = 57.0 bits (136), Expect = 3e-08 Identities = 33/131 (25%), Positives = 57/131 (43%) Frame = +1 Query: 7 TSTNSYAQGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXX 186 T Q AR + ++++ H + A DG +F + W +++ Sbjct: 80 TQLEQELQRARQQGVFISSSGDQAH-----STAGDGAMAFDVEYRRWQEDKNRQMKELSS 134 Query: 187 XXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWR 366 R +VD V+ HYE YR K AA +DV + + W + E +LW GG+R Sbjct: 135 AIDSHATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHLLSGMWKTPAERCFLWLGGFR 194 Query: 367 PTAAVQLLYSK 399 + ++L+ S+ Sbjct: 195 SSELLKLIASQ 205
>TGA3_ARATH (Q39234) Transcription factor TGA3 (AtbZIP22)| Length = 384 Score = 56.2 bits (134), Expect = 5e-08 Identities = 28/101 (27%), Positives = 46/101 (45%) Frame = +1 Query: 88 GSLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYR 267 G + G +F + W+ EQ+ + LVD L HY N +R Sbjct: 158 GPAGNMNSGIAAFEMEYTHWLEEQNRRVSEIRTALQAHIGDIELKMLVDSCLNHYANLFR 217 Query: 268 AKSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 390 K+ AA ADV + + W ++TE + W GG+RP+ + ++ Sbjct: 218 MKADAAKADVFFLMSGMWRTSTERFFQWIGGFRPSELLNVV 258
>TGA6_ARATH (Q39140) Transcription factor TGA6 (AtbZIP45)| Length = 330 Score = 55.8 bits (133), Expect = 7e-08 Identities = 35/140 (25%), Positives = 59/140 (42%) Frame = +1 Query: 7 TSTNSYAQGARATWITMTATSRPQHHNGSLARASDGGESFAKFFECWILEQSXXXXXXXX 186 T Q AR + ++++ H G +G +F W+ E++ Sbjct: 80 TQLEQELQRARQQGVFISSSGDQAHSTGG-----NGALAFDAEHSRWLEEKNRQMNELRS 134 Query: 187 XXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAASADVLPMFAPSWISATESLYLWCGGWR 366 R +VD V+ HYE +R KS AA DV + + W + E +LW GG+R Sbjct: 135 ALNAHAGDTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWKTPAERCFLWLGGFR 194 Query: 367 PTAAVQLLYSKSGVQLEAQL 426 + ++LL ++ E Q+ Sbjct: 195 SSELLKLLANQLEPMTERQV 214
>HBP1C_WHEAT (Q41558) Transcription factor HBP-1b(c1) (Fragment)| Length = 476 Score = 55.1 bits (131), Expect = 1e-07 Identities = 27/112 (24%), Positives = 51/112 (45%) Frame = +1 Query: 91 SLARASDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRA 270 S + + +G +F + W+ E + R++VD ++ Y+ ++R Sbjct: 248 SQSASGNGAVAFDMEYARWLEEHNKHINELRAAANAHAGDDDLRKIVDSIMSQYDEFFRL 307 Query: 271 KSAAASADVLPMFAPSWISATESLYLWCGGWRPTAAVQLLYSKSGVQLEAQL 426 K AA ADV + + W + E ++W GG+R + ++LL + E QL Sbjct: 308 KGVAAKADVFHVLSGMWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQL 359
>TGA1_ARATH (Q39237) Transcription factor TGA1 (DNA-binding protein TGA1a-like| protein) (AtbZIP47) Length = 368 Score = 54.3 bits (129), Expect = 2e-07 Identities = 30/105 (28%), Positives = 49/105 (46%) Frame = +1 Query: 112 GGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAASA 291 G +F + W+ EQ+ R LV+ + HY +R KS+AA A Sbjct: 152 GIAAFEMEYGHWVEEQNRQICELRTVLHGHINDIELRSLVENAMKHYFELFRMKSSAAKA 211 Query: 292 DVLPMFAPSWISATESLYLWCGGWRPTAAVQLLYSKSGVQLEAQL 426 DV + + W ++ E +LW GG+RP+ +++L V + QL Sbjct: 212 DVFFVMSGMWRTSAERFFLWIGGFRPSDLLKVLLPHFDVLTDQQL 256
>TGA4_ARATH (Q39162) Transcription factor TGA4 (Ocs element-binding factor 4)| (OBF4) (AtbZIP57) Length = 364 Score = 53.9 bits (128), Expect = 3e-07 Identities = 28/95 (29%), Positives = 45/95 (47%) Frame = +1 Query: 106 SDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAA 285 S G +F + W+ EQ+ R LV+ + HY +R KSAAA Sbjct: 146 SSGIVAFEMEYGHWVEEQNRQICELRTVLHGQVSDIELRSLVENAMKHYFQLFRMKSAAA 205 Query: 286 SADVLPMFAPSWISATESLYLWCGGWRPTAAVQLL 390 DV + + W ++ E +LW GG+RP+ +++L Sbjct: 206 KIDVFYVMSGMWKTSAERFFLWIGGFRPSELLKVL 240
>TGA21_TOBAC (O24160) TGACG-sequence-specific DNA-binding protein TGA-2.1| (TGA2.1) Length = 456 Score = 53.1 bits (126), Expect = 5e-07 Identities = 27/107 (25%), Positives = 49/107 (45%) Frame = +1 Query: 106 SDGGESFAKFFECWILEQSXXXXXXXXXXXXXXXXXXXRRLVDRVLGHYENYYRAKSAAA 285 ++G +F + W+ E + R +V+ V H++ +R K AA Sbjct: 230 ANGPLAFDAEYSRWLEEHNKHINELRTAVNAHASDPELRSIVNNVTAHFDEVFRVKGNAA 289 Query: 286 SADVLPMFAPSWISATESLYLWCGGWRPTAAVQLLYSKSGVQLEAQL 426 ADV + + W + E ++W GG+RP+ ++LL ++ E QL Sbjct: 290 KADVFHVLSGMWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQL 336
>ASNH_MYCTU (P64247) Putative asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 652 Score = 32.3 bits (72), Expect = 0.83 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +1 Query: 253 ENYY---RAKSAAASADVLPMFAPSW--ISATESLYLWCGGWRPTAAVQ 384 E YY R+ S A +VLP F P W T +Y GW P A +Q Sbjct: 442 ERYYGNARSFSGAQLREVLPGFRPDWTHTDVTAPVYAESAGWDPVARMQ 490
>ASNH_MYCBO (P64248) Putative asparagine synthetase [glutamine-hydrolyzing] (EC| 6.3.5.4) Length = 652 Score = 32.3 bits (72), Expect = 0.83 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = +1 Query: 253 ENYY---RAKSAAASADVLPMFAPSW--ISATESLYLWCGGWRPTAAVQ 384 E YY R+ S A +VLP F P W T +Y GW P A +Q Sbjct: 442 ERYYGNARSFSGAQLREVLPGFRPDWTHTDVTAPVYAESAGWDPVARMQ 490
>RPOL_BPT3 (P07659) DNA-directed RNA polymerase (EC 2.7.7.6)| Length = 884 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Frame = +1 Query: 268 AKSAAASADVLPMFAP------SWISATESLYLWCGGWRPTAAVQLLYSKSGV 408 AK A A A + PMF P W++ T Y W G RP A V+ +SK G+ Sbjct: 256 AKRAGALAGISPMFQPCVVPPKPWVAITGGGY-WANGRRPLALVR-THSKKGL 306
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 29.6 bits (65), Expect = 5.4 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = +2 Query: 8 PPPTLTHKEREPLGSP*PPPRDHSITTAA*P 100 PPPTL H EP P PPPR + T P Sbjct: 871 PPPTL-HLVPEPAAPPPPPPRTFQMVTTPFP 900
>GI24_MOUSE (Q9D659) Platelet receptor Gi24 precursor| Length = 309 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 12 HQLLRTRSESHLDHHDRHLATTASQRQP 95 H+ +R + HL HH HL AS QP Sbjct: 86 HRPIRNFTLQHLQHHGSHLKANASHDQP 113
>MIAA_SYMTH (Q67NL1) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 319 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +3 Query: 270 QVRGRLRRCAPHVRALVDLRHREPLPLVRRLAPYRRGPAAL 392 +VRG L R PHVRA+ L +RE + +R L + A + Sbjct: 222 EVRGLLVRYPPHVRAMQALGYRELVLYLRGLLTWEEAVALI 262 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,780,165 Number of Sequences: 219361 Number of extensions: 775658 Number of successful extensions: 2624 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2465 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2624 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
