ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17d07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full insert mRNA sequence Length = 1858 Score = 305 bits (154), Expect = 3e-80 Identities = 187/198 (94%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 123 gctgcatcggagctggctacgtcggcggcccaaccatggctgtcattgccatcaagtgcc 182 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | || |||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 183 cggcgattgaggtggtggttgtggacatctccaagccccgcattgacgcctggaacagcg 242 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 |||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| Sbjct: 243 acaccctcccgatctacgagcccggcctcgatgatgttgtcaaggcctgcagggggaaga 302 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 303 acctcttcttcagcactg 320
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 234 bits (118), Expect = 8e-59 Identities = 178/198 (89%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||||| Sbjct: 141739 gctgcatcggtgctggctatgtcggtggcccgaccatggccgtcattgccctcaagtgcc 141798 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 ||| |||||||| || || | ||||||||||||||||||||||| ||||||||||| | Sbjct: 141799 cagacattgaggttgtcgttgttgacatctccaagccccgcattgaggcctggaacagtg 141858 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 ||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||| Sbjct: 141859 acaccctcccgatctacgagcctggtctcgatgatgttgtgaagcagtgcaggggcaaga 141918 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 141919 acctcttcttcagcactg 141936
>gb|AY103689.1| Zea mays PCO113568 mRNA sequence Length = 1967 Score = 218 bits (110), Expect = 5e-54 Identities = 176/198 (88%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||||||||||||||| ||||| ||||| || ||||||||||||||| | ||||||| Sbjct: 186 gctgcatcggtgctggctatgtcggtggcccaaccatggctgtcattgccctaaagtgcc 245 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 ||| |||||||| || || | ||||||||||||||||||||||| || |||||||||| Sbjct: 246 cagacattgaggttgtcgttgttgacatctccaagccccgcattgaggcatggaacagcg 305 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 |||||||||||||||||||||| |||||| |||||||||| ||| |||||||||| || Sbjct: 306 acaccctcccgatctacgagcccggcctcgatgatgttgtgaagcagtgcaggggcagga 365 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 366 acctcttcttcagcactg 383
>gb|BT016824.1| Zea mays clone Contig657 mRNA sequence Length = 1951 Score = 210 bits (106), Expect = 1e-51 Identities = 175/198 (88%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||||||||||||||| ||||| ||||| || ||||| ||||||||| ||||||||| Sbjct: 183 gctgcatcggtgctggctatgtcggtggcccaaccatggccgtcattgccctcaagtgcc 242 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 ||| |||||||| || |||| ||||||||||||||||||||||| ||||||||||| | Sbjct: 243 cagacattgaggtcgtcgtcgttgacatctccaagccccgcattgaggcctggaacagtg 302 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 ||||||| || |||||||||||||| ||| |||||||||| ||| |||||||||| || Sbjct: 303 acaccctgccaatctacgagcctggtctcgatgatgttgtgaagcagtgcaggggcagga 362 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 363 acctcttcttcagcactg 380
>gb|AY110924.1| Zea mays CL298_3 mRNA sequence Length = 679 Score = 190 bits (96), Expect = 1e-45 Identities = 164/187 (87%) Strand = Plus / Plus Query: 12 gctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcccagctattgag 71 |||||||| ||||| ||||| || ||||| ||||||||| |||||||||||| |||||| Sbjct: 190 gctggctatgtcggtggcccaaccatggccgtcattgccctcaagtgcccagacattgag 249 Query: 72 gtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcgacaccctcccg 131 || || | || |||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 250 gtcgtcgncgtcgacatctccaagccccgcattgaggcctggaacagtgacaccctgcca 309 Query: 132 atctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaagaacctcttcttc 191 |||||||||||||| ||| |||||||||| ||| |||||||||| ||||||||||||| Sbjct: 310 atctacgagcctggtctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttc 369 Query: 192 agcactg 198 ||||||| Sbjct: 370 agcactg 376
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 170 bits (86), Expect = 1e-39 Identities = 170/198 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||| || |||||||| ||||||||||| || ||||| ||||||||| |||| |||| Sbjct: 14933009 gctgcattggagctggctatgtcggcggcccaaccatggccgtcattgccctcaaatgcc 14933068 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| || ||||||||||| | ||||| |||||||| |||||||| ||||||||||||| Sbjct: 14933069 cagcaatcgaggtggtggttgttgacatttccaagcctcgcattgatgcctggaacagcg 14933128 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | |||||||||||||||||||||||| |||| || || |||| ||||| |||| || Sbjct: 14933129 aacagctcccgatctacgagcctggcctcgatgaggtcgtgaaggagtgcagaggcagga 14933188 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 14933189 acctcttcttcagcactg 14933206 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| || ||||||||||| || ||||||||||||||| |||| |||| Sbjct: 14938885 gctgcatcggagctggatatgtcggcggcccaaccatggctgtcattgccctcaaatgcc 14938944 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| |||||||||||||| | |||||||||||||| ||| |||| ||||||||||||| Sbjct: 14938945 cagcaattgaggtggtggttgttgacatctccaagcctcgcgttgatgcctggaacagcg 14939004 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 || ||||| ||||||||||| || || |||| ||||| |||| |||||||||| || Sbjct: 14939005 accagctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcagga 14939064 Query: 181 acctcttcttcag 193 ||||||||||||| Sbjct: 14939065 acctcttcttcag 14939077
>dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E05, full insert sequence Length = 1865 Score = 170 bits (86), Expect = 1e-39 Identities = 170/198 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||| || |||||||| ||||||||||| || ||||| ||||||||| |||| |||| Sbjct: 134 gctgcattggagctggctatgtcggcggcccaaccatggccgtcattgccctcaaatgcc 193 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| || ||||||||||| | ||||| |||||||| |||||||| ||||||||||||| Sbjct: 194 cagcaatcgaggtggtggttgttgacatttccaagcctcgcattgatgcctggaacagcg 253 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | |||||||||||||||||||||||| |||| || || |||| ||||| |||| || Sbjct: 254 aacagctcccgatctacgagcctggcctcgatgaggtcgtgaaggagtgcagaggcagga 313 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 314 acctcttcttcagcactg 331
>dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H11, full insert sequence Length = 1852 Score = 170 bits (86), Expect = 1e-39 Identities = 170/198 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||| || |||||||| ||||||||||| || ||||| ||||||||| |||| |||| Sbjct: 134 gctgcattggagctggctatgtcggcggcccaaccatggccgtcattgccctcaaatgcc 193 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| || ||||||||||| | ||||| |||||||| |||||||| ||||||||||||| Sbjct: 194 cagcaatcgaggtggtggttgttgacatttccaagcctcgcattgatgcctggaacagcg 253 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | |||||||||||||||||||||||| |||| || || |||| ||||| |||| || Sbjct: 254 aacagctcccgatctacgagcctggcctcgatgaggtcgtgaaggagtgcagaggcagga 313 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 314 acctcttcttcagcactg 331
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 170 bits (86), Expect = 1e-39 Identities = 170/198 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||| || |||||||| ||||||||||| || ||||| ||||||||| |||| |||| Sbjct: 14887292 gctgcattggagctggctatgtcggcggcccaaccatggccgtcattgccctcaaatgcc 14887351 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| || ||||||||||| | ||||| |||||||| |||||||| ||||||||||||| Sbjct: 14887352 cagcaatcgaggtggtggttgttgacatttccaagcctcgcattgatgcctggaacagcg 14887411 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | |||||||||||||||||||||||| |||| || || |||| ||||| |||| || Sbjct: 14887412 aacagctcccgatctacgagcctggcctcgatgaggtcgtgaaggagtgcagaggcagga 14887471 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 14887472 acctcttcttcagcactg 14887489 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| || ||||||||||| || ||||||||||||||| |||| |||| Sbjct: 14893168 gctgcatcggagctggatatgtcggcggcccaaccatggctgtcattgccctcaaatgcc 14893227 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| |||||||||||||| | |||||||||||||| ||| |||| ||||||||||||| Sbjct: 14893228 cagcaattgaggtggtggttgttgacatctccaagcctcgcgttgatgcctggaacagcg 14893287 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 || ||||| ||||||||||| || || |||| ||||| |||| |||||||||| || Sbjct: 14893288 accagctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcagga 14893347 Query: 181 acctcttcttcag 193 ||||||||||||| Sbjct: 14893348 acctcttcttcag 14893360
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 170 bits (86), Expect = 1e-39 Identities = 170/198 (85%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||| || |||||||| ||||||||||| || ||||| ||||||||| |||| |||| Sbjct: 148838 gctgcattggagctggctatgtcggcggcccaaccatggccgtcattgccctcaaatgcc 148779 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| || ||||||||||| | ||||| |||||||| |||||||| ||||||||||||| Sbjct: 148778 cagcaatcgaggtggtggttgttgacatttccaagcctcgcattgatgcctggaacagcg 148719 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | |||||||||||||||||||||||| |||| || || |||| ||||| |||| || Sbjct: 148718 aacagctcccgatctacgagcctggcctcgatgaggtcgtgaaggagtgcagaggcagga 148659 Query: 181 acctcttcttcagcactg 198 |||||||||||||||||| Sbjct: 148658 acctcttcttcagcactg 148641 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| || ||||||||||| || ||||||||||||||| |||| |||| Sbjct: 142962 gctgcatcggagctggatatgtcggcggcccaaccatggctgtcattgccctcaaatgcc 142903 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| |||||||||||||| | |||||||||||||| ||| |||| ||||||||||||| Sbjct: 142902 cagcaattgaggtggtggttgttgacatctccaagcctcgcgttgatgcctggaacagcg 142843 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 || ||||| ||||||||||| || || |||| ||||| |||| |||||||||| || Sbjct: 142842 accagctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcagga 142783 Query: 181 acctcttcttcag 193 ||||||||||||| Sbjct: 142782 acctcttcttcag 142770
>dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A09, full insert sequence Length = 1774 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| || ||||||||||| || ||||||||||||||| |||| |||| Sbjct: 120 gctgcatcggagctggatatgtcggcggcccaaccatggctgtcattgccctcaaatgcc 179 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| |||||||||||||| | |||||||||||||| ||| |||| ||||||||||||| Sbjct: 180 cagcaattgaggtggtggttgttgacatctccaagcctcgcgttgatgcctggaacagcg 239 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 || ||||| ||||||||||| || || |||| ||||| |||| |||||||||| || Sbjct: 240 accagctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcagga 299 Query: 181 acctcttcttcag 193 ||||||||||||| Sbjct: 300 acctcttcttcag 312
>dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023C02, full insert sequence Length = 1824 Score = 168 bits (85), Expect = 4e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| || ||||||||||| || ||||||||||||||| |||| |||| Sbjct: 249 gctgcatcggagctggatatgtcggcggcccaaccatggctgtcattgccctcaaatgcc 308 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 |||| |||||||||||||| | |||||||||||||| ||| |||| ||||||||||||| Sbjct: 309 cagcaattgaggtggtggttgttgacatctccaagcctcgcgttgatgcctggaacagcg 368 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 || ||||| ||||||||||| || || |||| ||||| |||| |||||||||| || Sbjct: 369 accagctcccaatctacgagcccggtcttgatgaggttgtgaaggaatgcaggggcagga 428 Query: 181 acctcttcttcag 193 ||||||||||||| Sbjct: 429 acctcttcttcag 441
>ref|XM_469834.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2058 Score = 159 bits (80), Expect = 4e-36 Identities = 167/196 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| ||||| ||||| ||||| ||||| || || ||| ||||||||| Sbjct: 221 gctgcatcggagctgggtacgtgggcgggccgaccatggcggtgatcgccctcaagtgcc 280 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | || || ||||||||||||| ||||||||||||||| ||||| |||||||||||||||| Sbjct: 281 cggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcg 340 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | || |||||||||||||| || ||| | || || ||||||| |||||||||| || Sbjct: 341 agcagctgccgatctacgagccggggctcgacgaggtggtcaaggagtgcaggggcagga 400 Query: 181 acctcttcttcagcac 196 |||||||||||||||| Sbjct: 401 acctcttcttcagcac 416
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 159 bits (80), Expect = 4e-36 Identities = 167/196 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| ||||| ||||| ||||| ||||| || || ||| ||||||||| Sbjct: 31012627 gctgcatcggagctgggtacgtgggcgggccgaccatggcggtgatcgccctcaagtgcc 31012686 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | || || ||||||||||||| ||||||||||||||| ||||| |||||||||||||||| Sbjct: 31012687 cggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcg 31012746 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | || |||||||||||||| || ||| | || || ||||||| |||||||||| || Sbjct: 31012747 agcagctgccgatctacgagccggggctcgacgaggtggtcaaggagtgcaggggcagga 31012806 Query: 181 acctcttcttcagcac 196 |||||||||||||||| Sbjct: 31012807 acctcttcttcagcac 31012822 Score = 113 bits (57), Expect = 2e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||| |||| || ||||| |||||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 17586555 gctgcctcggagccggctatgtcggcggcccgaccatggcggtcatcgccctcaagtgcc 17586614 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | | | |||||||| |||| |||||||||| ||||||| |||||||||||||||| Sbjct: 17586615 ccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatcgacgcctggaacagcg 17586674 Query: 121 acaccctcccgatctacgagcctggcctc 149 || | ||||||||||||||||| |||||| Sbjct: 17586675 acgcgctcccgatctacgagccgggcctc 17586703 Score = 42.1 bits (21), Expect = 0.63 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| || || ||||| ||||||||||| ||||| || || || ||||||||| Sbjct: 22450933 gctgcatcggggcggggtacgtgggcggcccgacgatggcggtgatcgcgctcaagtgcc 22450874 Query: 61 c 61 | Sbjct: 22450873 c 22450873
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 159 bits (80), Expect = 4e-36 Identities = 167/196 (85%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| ||||| ||||| ||||| ||||| || || ||| ||||||||| Sbjct: 83437 gctgcatcggagctgggtacgtgggcgggccgaccatggcggtgatcgccctcaagtgcc 83378 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | || || ||||||||||||| ||||||||||||||| ||||| |||||||||||||||| Sbjct: 83377 cggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcg 83318 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | || |||||||||||||| || ||| | || || ||||||| |||||||||| || Sbjct: 83317 agcagctgccgatctacgagccggggctcgacgaggtggtcaaggagtgcaggggcagga 83258 Query: 181 acctcttcttcagcac 196 |||||||||||||||| Sbjct: 83257 acctcttcttcagcac 83242
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 159 bits (80), Expect = 4e-36 Identities = 167/196 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| ||||| ||||| ||||| ||||| || || ||| ||||||||| Sbjct: 31103150 gctgcatcggagctgggtacgtgggcgggccgaccatggcggtgatcgccctcaagtgcc 31103209 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | || || ||||||||||||| ||||||||||||||| ||||| |||||||||||||||| Sbjct: 31103210 cggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcg 31103269 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | || |||||||||||||| || ||| | || || ||||||| |||||||||| || Sbjct: 31103270 agcagctgccgatctacgagccggggctcgacgaggtggtcaaggagtgcaggggcagga 31103329 Query: 181 acctcttcttcagcac 196 |||||||||||||||| Sbjct: 31103330 acctcttcttcagcac 31103345 Score = 113 bits (57), Expect = 2e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||| |||| || ||||| |||||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 17580096 gctgcctcggagccggctatgtcggcggcccgaccatggcggtcatcgccctcaagtgcc 17580155 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | | | |||||||| |||| |||||||||| ||||||| |||||||||||||||| Sbjct: 17580156 ccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatcgacgcctggaacagcg 17580215 Query: 121 acaccctcccgatctacgagcctggcctc 149 || | ||||||||||||||||| |||||| Sbjct: 17580216 acgcgctcccgatctacgagccgggcctc 17580244 Score = 42.1 bits (21), Expect = 0.63 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| || || ||||| ||||||||||| ||||| || || || ||||||||| Sbjct: 22443962 gctgcatcggggcggggtacgtgggcggcccgacgatggcggtgatcgcgctcaagtgcc 22443903 Query: 61 c 61 | Sbjct: 22443902 c 22443902
>dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F12, full insert sequence Length = 1946 Score = 159 bits (80), Expect = 4e-36 Identities = 167/196 (85%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| ||||| ||||| ||||| ||||| ||||| || || ||| ||||||||| Sbjct: 126 gctgcatcggagctgggtacgtgggcgggccgaccatggcggtgatcgccctcaagtgcc 185 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | || || ||||||||||||| ||||||||||||||| ||||| |||||||||||||||| Sbjct: 186 cggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatcgacgcctggaacagcg 245 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 | || |||||||||||||| || ||| | || || ||||||| |||||||||| || Sbjct: 246 agcagctgccgatctacgagccggggctcgacgaggtggtcaaggagtgcaggggcagga 305 Query: 181 acctcttcttcagcac 196 |||||||||||||||| Sbjct: 306 acctcttcttcagcac 321
>gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence Length = 1682 Score = 133 bits (67), Expect = 2e-28 Identities = 104/115 (90%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 85 acatctccaagccccgcattgacgcctggaacagcg-acaccctcccgatctacgagcct 143 |||||||||||||||||||||| || |||||||||| || ||||||||||||||||||| Sbjct: 10 acatctccaagccccgcattgaggcatggaacagcgcactccctcccgatctacgagccc 69 Query: 144 ggcctccatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcactg 198 |||||| |||||||||| ||| |||||||||| |||||||||||||||||||| Sbjct: 70 ggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactg 124
>gb|AF405548.1| Cryptococcus neoformans var. neoformans UDP-glucose dehydrogenase Ugd1p (UGD1) gene, complete cds Length = 2377 Score = 113 bits (57), Expect = 2e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 102 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtc 161 ||||||||||||||| |||| |||||| |||||||||||||| ||| |||| |||||| Sbjct: 595 attgacgcctggaactctgacaacctccctatctacgagcctggtctcgatgaggttgtc 654 Query: 162 aaggcctgcaggggcaagaacctcttcttcagcactg 198 |||||| ||||||||||||||||||||||||||||| Sbjct: 655 aaggccaccaggggcaagaacctcttcttcagcactg 691
>ref|XM_468764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1446 Score = 113 bits (57), Expect = 2e-22 Identities = 126/149 (84%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||| |||| || ||||| |||||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 14 gctgcctcggagccggctatgtcggcggcccgaccatggcggtcatcgccctcaagtgcc 73 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | | | |||||||| |||| |||||||||| ||||||| |||||||||||||||| Sbjct: 74 ccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatcgacgcctggaacagcg 133 Query: 121 acaccctcccgatctacgagcctggcctc 149 || | ||||||||||||||||| |||||| Sbjct: 134 acgcgctcccgatctacgagccgggcctc 162
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 113 bits (57), Expect = 2e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 102 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtc 161 ||||||||||||||| |||| |||||| |||||||||||||| ||| |||| |||||| Sbjct: 795796 attgacgcctggaactctgacaacctccctatctacgagcctggtctcgatgaggttgtc 795855 Query: 162 aaggcctgcaggggcaagaacctcttcttcagcactg 198 |||||| ||||||||||||||||||||||||||||| Sbjct: 795856 aaggccaccaggggcaagaacctcttcttcagcactg 795892
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 113 bits (57), Expect = 2e-22 Identities = 126/149 (84%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||| |||| || ||||| |||||||||||||| ||||| ||||| ||| ||||||||| Sbjct: 68522 gctgcctcggagccggctatgtcggcggcccgaccatggcggtcatcgccctcaagtgcc 68463 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 | | | |||||||| |||| |||||||||| ||||||| |||||||||||||||| Sbjct: 68462 ccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatcgacgcctggaacagcg 68403 Query: 121 acaccctcccgatctacgagcctggcctc 149 || | ||||||||||||||||| |||||| Sbjct: 68402 acgcgctcccgatctacgagccgggcctc 68374
>ref|XM_568166.1| Cryptococcus neoformans var. neoformans JEC21 UDP-glucose 6-dehydrogenase (CNL06460) partial mRNA Length = 1646 Score = 113 bits (57), Expect = 2e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 102 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtc 161 ||||||||||||||| |||| |||||| |||||||||||||| ||| |||| |||||| Sbjct: 184 attgacgcctggaactctgacaacctccctatctacgagcctggtctcgatgaggttgtc 243 Query: 162 aaggcctgcaggggcaagaacctcttcttcagcactg 198 |||||| ||||||||||||||||||||||||||||| Sbjct: 244 aaggccaccaggggcaagaacctcttcttcagcactg 280
>gb|AY530214.1| Cryptococcus neoformans var. grubii UDP-glucose dehydrogenase gene, complete cds Length = 4991 Score = 97.6 bits (49), Expect = 1e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 102 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtc 161 ||||||||||||||| |||| |||||| ||||| || ||||| ||| |||| |||||| Sbjct: 1548 attgacgcctggaactctgacaacctccctatctatgaacctggtctcgatgaggttgtc 1607 Query: 162 aaggcctgcaggggcaagaacctcttcttcagcactg 198 |||||| ||||||||||||||||||||||||||||| Sbjct: 1608 aaggccaccaggggcaagaacctcttcttcagcactg 1644
>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence Length = 106790 Score = 79.8 bits (40), Expect = 3e-12 Identities = 157/196 (80%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 ||||||| ||||| || || ||||| || || |||||||| |||||||| | ||||| | Sbjct: 71927 gctgcattggtgccggatatgtcggtggtccaacaatggcagtcattgcacttaagtgtc 71986 Query: 61 cagctattgaggtggtggtcgccgacatctccaagccccgcattgacgcctggaacagcg 120 || | ||||| |||| || | ||||| || || |||||||||| ||||||||||| | Sbjct: 71987 catccattgaagtggctgttgttgacatatctaaaccccgcattgcagcctggaacagtg 72046 Query: 121 acaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgcaggggcaaga 180 ||||||| || ||||| || |||||||| | |||||||| ||| ||| | ||||||| Sbjct: 72047 acacccttccaatctatgaacctggccttgacgatgttgtaaagcaatgccgtggcaaga 72106 Query: 181 acctcttcttcagcac 196 |||||||||||||||| Sbjct: 72107 acctcttcttcagcac 72122
>gb|AY619949.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 2 mRNA, complete cds Length = 1768 Score = 65.9 bits (33), Expect = 4e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 108 gcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaaggcc 167 ||||||||||||||| ||||| ||||| ||||| |||||| | ||||| ||||||| Sbjct: 200 gcctggaacagcgaccagctccccatctatgagccaggcctcgaggatgtagtcaaggaa 259 Query: 168 tgcaggggcaagaacctcttcttcagcac 196 ||| | |||| |||||||||||||||||| Sbjct: 260 tgccgaggcaggaacctcttcttcagcac 288
>gb|AY619948.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 1 mRNA, complete cds Length = 1823 Score = 65.9 bits (33), Expect = 4e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 108 gcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaaggcc 167 ||||||||||||||| ||||| ||||| ||||| |||||| | ||||| ||||||| Sbjct: 209 gcctggaacagcgaccagctccccatctatgagccaggcctcgaggatgtagtcaaggaa 268 Query: 168 tgcaggggcaagaacctcttcttcagcac 196 ||| | |||| |||||||||||||||||| Sbjct: 269 tgccgaggcaggaacctcttcttcagcac 297 Score = 38.2 bits (19), Expect = 9.8 Identities = 55/67 (82%) Strand = Plus / Plus Query: 9 ggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcccagctatt 68 |||||||| || || || ||||| || ||||||||||| || |||||||||| ||||| Sbjct: 110 ggtgctggatatgttgggggccccaccatggctgtcatagcactcaagtgcccttctatt 169 Query: 69 gaggtgg 75 || |||| Sbjct: 170 gaagtgg 176
>gb|U53418.1|GMU53418 Glycine max UDP-glucose dehydrogenase mRNA, complete cds Length = 1714 Score = 60.0 bits (30), Expect = 3e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 97 cccgcattgacgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatg 156 ||||||||| ||||||||||||||| || || ||||| || |||||||| ||| || Sbjct: 122 cccgcattgcagcctggaacagcgaccagcttcctatctatgaacctggccttgatggtg 181 Query: 157 ttgtcaaggcctgcaggggcaagaacctcttcttcagcactg 198 |||| ||| ||| | ||||||||||||||||||||||||| Sbjct: 182 ttgtgaagcaatgccgtggcaagaacctcttcttcagcactg 223
>gb|BT013548.1| Lycopersicon esculentum clone 132272F, mRNA sequence Length = 1845 Score = 58.0 bits (29), Expect = 1e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 108 gcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaaggcc 167 ||||||||||| || || ||||| || || ||||| |||||| ||||| | ||||||| Sbjct: 304 gcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggag 363 Query: 168 tgcaggggcaagaacctcttcttcagcac 196 ||| | |||| |||||||||||||||||| Sbjct: 364 tgccgaggcaggaacctcttcttcagcac 392
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.2 mRNA, complete cds Length = 1790 Score = 50.1 bits (25), Expect = 0.003 Identities = 70/85 (82%) Strand = Plus / Plus Query: 106 acgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaagg 165 |||| |||||||| ||||| || ||||| ||||||||||| || |||||||||| ||| Sbjct: 182 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 241 Query: 166 cctgcaggggcaagaacctcttctt 190 ||| | ||||||||||| ||||| Sbjct: 242 aatgccgtggcaagaaccttttctt 266
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.1 mRNA, complete cds Length = 1793 Score = 50.1 bits (25), Expect = 0.003 Identities = 70/85 (82%) Strand = Plus / Plus Query: 106 acgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaagg 165 |||| |||||||| ||||| || ||||| ||||||||||| || |||||||||| ||| Sbjct: 185 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 244 Query: 166 cctgcaggggcaagaacctcttctt 190 ||| | ||||||||||| ||||| Sbjct: 245 aatgccgtggcaagaaccttttctt 269
>gb|AY496079.1| Cinnamomum osmophloeum UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 50.1 bits (25), Expect = 0.003 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgc 49 |||||||||| ||||| || || || |||||||| |||||||||||||| Sbjct: 14 gctgcatcggagctggatatgttggtggcccgaccatggctgtcattgc 62
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds Length = 1793 Score = 50.1 bits (25), Expect = 0.003 Identities = 70/85 (82%) Strand = Plus / Plus Query: 106 acgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaagg 165 |||| |||||||| ||||| || ||||| ||||||||||| || |||||||||| ||| Sbjct: 185 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 244 Query: 166 cctgcaggggcaagaacctcttctt 190 ||| | ||||||||||| ||||| Sbjct: 245 aatgccgtggcaagaaccttttctt 269
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence Length = 1746 Score = 50.1 bits (25), Expect = 0.003 Identities = 70/85 (82%) Strand = Plus / Plus Query: 106 acgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaagg 165 |||| |||||||| ||||| || ||||| ||||||||||| || |||||||||| ||| Sbjct: 185 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 244 Query: 166 cctgcaggggcaagaacctcttctt 190 ||| | ||||||||||| ||||| Sbjct: 245 aatgccgtggcaagaaccttttctt 269
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 50.1 bits (25), Expect = 0.003 Identities = 70/85 (82%) Strand = Plus / Minus Query: 106 acgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaagg 165 |||| |||||||| ||||| || ||||| ||||||||||| || |||||||||| ||| Sbjct: 18340 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 18281 Query: 166 cctgcaggggcaagaacctcttctt 190 ||| | ||||||||||| ||||| Sbjct: 18280 aatgccgtggcaagaaccttttctt 18256
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds Length = 1486 Score = 50.1 bits (25), Expect = 0.003 Identities = 70/85 (82%) Strand = Plus / Plus Query: 106 acgcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaagg 165 |||| |||||||| ||||| || ||||| ||||||||||| || |||||||||| ||| Sbjct: 132 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 191 Query: 166 cctgcaggggcaagaacctcttctt 190 ||| | ||||||||||| ||||| Sbjct: 192 aatgccgtggcaagaaccttttctt 216
>gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase (ugdh) mRNA, complete cds Length = 1819 Score = 46.1 bits (23), Expect = 0.040 Identities = 137/175 (78%) Strand = Plus / Plus Query: 21 gtcggcggcccgacaatggctgtcattgccatcaagtgcccagctattgaggtggtggtc 80 |||||||| || |||||||||||||| || |||||||||| | ||||| |||||||| Sbjct: 111 gtcggcgggcctacaatggctgtcatcgcactcaagtgcccgtcaattgaagtggtggtt 170 Query: 81 gccgacatctccaagccccgcattgacgcctggaacagcgacaccctcccgatctacgag 140 | ||||||| | || | |||| ||||||||||| ||| ||||| ||||| ||| Sbjct: 171 gttgacatctgggaacctaggattgcagcctggaacagtgaccagctccccatctatgag 230 Query: 141 cctggcctccatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagca 195 || ||||| ||||||| || |||| ||| | |||| ||| ||||||||||||| Sbjct: 231 ccaggcctgtatgatgtggtgaaggagtgccgaggcaggaatctcttcttcagca 285
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgt 43 |||||||||| || ||||| || ||||||||||| |||||||| Sbjct: 203896 gctgcatcggcgccggctatgtgggcggcccgaccatggctgt 203938
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 46.1 bits (23), Expect = 0.040 Identities = 32/35 (91%) Strand = Plus / Minus Query: 6 atcggtgctggctacgtcggcggcccgacaatggc 40 ||||| || ||||| |||||||||||||||||||| Sbjct: 647600 atcggcgccggctatgtcggcggcccgacaatggc 647566
>emb|BX294135.1| Pirellula sp. strain 1 complete genome; segment 3/24 Length = 340750 Score = 44.1 bits (22), Expect = 0.16 Identities = 34/38 (89%) Strand = Plus / Plus Query: 3 tgcatcggtgctggctacgtcggcggcccgacaatggc 40 ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 308724 tgcatcggtgccggctacgtcggtggtccgacgatggc 308761
>gb|AY222335.1| Colocasia esculenta UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 44.1 bits (22), Expect = 0.16 Identities = 58/70 (82%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||| ||||| |||||||| ||||| || || || |||||||| || || ||||||||| Sbjct: 14 gctgtatcggagctggctatgtcggggggccaactatggctgtgatcgcactcaagtgcc 73 Query: 61 cagctattga 70 |||| ||||| Sbjct: 74 cagccattga 83 Score = 42.1 bits (21), Expect = 0.63 Identities = 27/29 (93%) Strand = Plus / Plus Query: 168 tgcaggggcaagaacctcttcttcagcac 196 ||||| |||| |||||||||||||||||| Sbjct: 181 tgcagaggcaggaacctcttcttcagcac 209
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 0.63 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1 gctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcc 60 |||||||||| || || ||||| ||||||||||| ||||| || || || ||||||||| Sbjct: 46180 gctgcatcggggcggggtacgtgggcggcccgacgatggcggtgatcgcgctcaagtgcc 46121 Query: 61 c 61 | Sbjct: 46120 c 46120
>gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete sequence Length = 118017 Score = 42.1 bits (21), Expect = 0.63 Identities = 24/25 (96%) Strand = Plus / Plus Query: 174 ggcaagaacctcttcttcagcactg 198 ||||||||||| ||||||||||||| Sbjct: 23705 ggcaagaaccttttcttcagcactg 23729
>ref|XM_428078.1| PREDICTED: Gallus gallus similar to UDP-glucose 6-dehydrogenase (LOC430523), partial mRNA Length = 555 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcgg 28 |||| |||||||||||||| |||||||| Sbjct: 416 gctgtatcggtgctggctatgtcggcgg 443
>gb|AC002287.1|HUAC002287 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-237H1 ~complete genomic sequence, complete sequence Length = 188636 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 caagaacctcttcttcagca 195 |||||||||||||||||||| Sbjct: 49951 caagaacctcttcttcagca 49932
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 40.1 bits (20), Expect = 2.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 111 tggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaaggcctgc 170 |||||||||||| ||| |||||||||||||| || || | | || || |||| ||| Sbjct: 141069 tggaacagcgaccacctaccgatctacgagccaggtcttgaagccgtggtgaaggagtgc 141128 Query: 171 aggggcaagaacctcttcttcagcactg 198 ||||| | |||||| ||||||||||||| Sbjct: 141129 aggggaaggaaccttttcttcagcactg 141156
>gb|AC080008.23| Homo sapiens 3 BAC RP11-615P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197883 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ccccgcattgacgcctggaa 115 |||||||||||||||||||| Sbjct: 21882 ccccgcattgacgcctggaa 21863
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggtcgccgacatctccaagc 96 |||||||||||||||||||| Sbjct: 3788278 ggtcgccgacatctccaagc 3788297
>emb|AJ851561.1| Gallus gallus mRNA for hypothetical protein, clone 7d7 Length = 3956 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcgg 28 |||| |||||||||||||| |||||||| Sbjct: 172 gctgtatcggtgctggctatgtcggcgg 199
>gb|AF053973.1| Populus tremula x Populus tremuloides UDP-glucose dehydrogenase gene (ugdh), complete cds Length = 1824 Score = 40.1 bits (20), Expect = 2.5 Identities = 71/88 (80%) Strand = Plus / Plus Query: 108 gcctggaacagcgacaccctcccgatctacgagcctggcctccatgatgttgtcaaggcc 167 ||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| || |||| Sbjct: 198 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 257 Query: 168 tgcaggggcaagaacctcttcttcagca 195 ||| | |||| ||| ||||||||||||| Sbjct: 258 tgccgaggcaggaatctcttcttcagca 285 Score = 38.2 bits (19), Expect = 9.8 Identities = 40/47 (85%) Strand = Plus / Plus Query: 33 acaatggctgtcattgccatcaagtgcccagctattgaggtggtggt 79 |||||||||||||| || |||||||||| | ||||| |||||||| Sbjct: 123 acaatggctgtcatcgcactcaagtgcccgtcaattgaagtggtggt 169
>gb|AC130450.3| Homo sapiens chromosome 16 clone CTA-237H1, complete sequence Length = 183842 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 caagaacctcttcttcagca 195 |||||||||||||||||||| Sbjct: 45551 caagaacctcttcttcagca 45532
>gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, complete sequence Length = 172331 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 caagaacctcttcttcagca 195 |||||||||||||||||||| Sbjct: 152323 caagaacctcttcttcagca 152304
>gb|AF323964.1|AF323964 Azospirillum brasilense PII protein (glnB) gene, complete cds; and GS protein (glnA) gene, partial cds Length = 3726 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaggtggtggtcgccgacat 88 |||||||||||||||||||| Sbjct: 531 gaggtggtggtcgccgacat 512
>gb|AF530054.1| Azospirillum brasilense Yu62 clpP-tig gene cluster Length = 6369 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaggtggtggtcgccgacat 88 |||||||||||||||||||| Sbjct: 4810 gaggtggtggtcgccgacat 4791
>ref|NM_001012581.1| Gallus gallus UDP-glucose dehydrogenase (UGDH), mRNA Length = 3956 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gctgcatcggtgctggctacgtcggcgg 28 |||| |||||||||||||| |||||||| Sbjct: 172 gctgtatcggtgctggctatgtcggcgg 199
>ref|XM_477165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 173 gggcaagaacctcttcttcagca 195 ||||| ||||||||||||||||| Sbjct: 93 gggcaggaacctcttcttcagca 115
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 177 aagaacctcttcttcagca 195 ||||||||||||||||||| Sbjct: 2996050 aagaacctcttcttcagca 2996068
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 174 ggcaagaacctcttcttcagcac 196 |||||||||||||| |||||||| Sbjct: 65568 ggcaagaacctcttattcagcac 65590
>ref|XM_751193.1| Ustilago maydis 521 hypothetical protein (UM00139.1) partial mRNA Length = 3174 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 gatgttgtcaaggcctgca 171 ||||||||||||||||||| Sbjct: 1084 gatgttgtcaaggcctgca 1102
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 174 ggcaagaacctcttcttcagcac 196 |||||||||||||| |||||||| Sbjct: 300510 ggcaagaacctcttattcagcac 300532
>emb|BX897676.1| Neurospora crassa DNA linkage group VI BAC clone B8I24 Length = 83591 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 attgccatcaagtgcccag 63 ||||||||||||||||||| Sbjct: 75733 attgccatcaagtgcccag 75751
>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence Length = 187718 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 162 aaggcctgcaggggcaaga 180 ||||||||||||||||||| Sbjct: 66513 aaggcctgcaggggcaaga 66495
>gb|AE005704.1| Caulobacter crescentus CB15 section 30 of 359 of the complete genome Length = 9704 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 gaggtggtggtcgccgaca 87 ||||||||||||||||||| Sbjct: 1395 gaggtggtggtcgccgaca 1377
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 38.2 bits (19), Expect = 9.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 168 tgcaggggcaagaacctcttcttcagcactg 198 ||||| || |||||||| ||||||||||||| Sbjct: 69569 tgcagaggaaagaaccttttcttcagcactg 69599
>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome Length = 280334 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ccgacaatggctgtcattgccat 52 |||||||| |||||||||||||| Sbjct: 215054 ccgacaatagctgtcattgccat 215032
>gb|AC051642.5| Homo sapiens chromosome 8, clone RP11-583M2, complete sequence Length = 174445 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 140 gcctggcctccatgatgtt 158 ||||||||||||||||||| Sbjct: 98667 gcctggcctccatgatgtt 98649
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 174 ggcaagaacctcttcttcagcac 196 |||||||||||||| |||||||| Sbjct: 300510 ggcaagaacctcttattcagcac 300532
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 173 gggcaagaacctcttcttcagca 195 ||||| ||||||||||||||||| Sbjct: 7220395 gggcaggaacctcttcttcagca 7220417
>gb|AC097230.3| Sus scrofa clone RP44-254G1, complete sequence Length = 162289 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 167 ctgcaggggcaagaacctc 185 ||||||||||||||||||| Sbjct: 29455 ctgcaggggcaagaacctc 29473
>gb|AC097231.3| Sus scrofa clone RP44-504L18, complete sequence Length = 161823 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 167 ctgcaggggcaagaacctc 185 ||||||||||||||||||| Sbjct: 161451 ctgcaggggcaagaacctc 161469
>gb|DQ163920.1| Bacteriophage SD1-M, complete genome Length = 281083 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ccgacaatggctgtcattgccat 52 |||||||| |||||||||||||| Sbjct: 216148 ccgacaatagctgtcattgccat 216126
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 173 gggcaagaacctcttcttcagca 195 ||||| ||||||||||||||||| Sbjct: 60879 gggcaggaacctcttcttcagca 60901
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 ggtggtggtcgccgacatc 89 ||||||||||||||||||| Sbjct: 628396 ggtggtggtcgccgacatc 628414
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 174 ggcaagaacctcttcttcagcac 196 |||||||||||||| |||||||| Sbjct: 300507 ggcaagaacctcttattcagcac 300529
>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence Length = 230518 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 37 tggctgtcattgccatcaa 55 ||||||||||||||||||| Sbjct: 26412 tggctgtcattgccatcaa 26394
>gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complete sequence Length = 204175 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 aggcctgcaggggcaagaa 181 ||||||||||||||||||| Sbjct: 58291 aggcctgcaggggcaagaa 58273
>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence Length = 206081 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 163 aggcctgcaggggcaagaa 181 ||||||||||||||||||| Sbjct: 188118 aggcctgcaggggcaagaa 188100
>emb|AL672180.11| Mouse DNA sequence from clone RP23-419G22 on chromosome X, complete sequence Length = 212659 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 145 gcctccatgatgttgtcaa 163 ||||||||||||||||||| Sbjct: 203322 gcctccatgatgttgtcaa 203304 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,390,508 Number of Sequences: 3902068 Number of extensions: 1390508 Number of successful extensions: 95313 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94566 Number of HSP's gapped (non-prelim): 731 length of query: 198 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 176 effective length of database: 17,147,199,772 effective search space: 3017907159872 effective search space used: 3017907159872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
