ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart17d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_007131.2| Homo sapiens zinc finger protein 75 (D8C6) (ZNF... 42 0.086
2gb|AC146267.3| Pan troglodytes BAC clone CH251-55N11 from X, com... 42 0.086
3gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome... 42 0.086
4emb|AL450472.14| Human DNA sequence from clone RP11-265D19 on ch... 42 0.086
5emb|AL831984.2|HSM803291 Homo sapiens mRNA; cDNA DKFZp451F083 (f... 42 0.086
6gb|AC005628.4| Homo sapiens PAC clone RP4-613C23 from Xq23, comp... 42 0.086
7gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosom... 42 0.086
8gb|AC142305.1| Pan troglodytes BAC clone RP43-130P22 from 7, com... 40 0.34
9emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chr... 40 0.34
10gb|AC018728.6| Homo sapiens chromosome 7 clone RP11-206N24, comp... 40 0.34
11gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q... 40 0.34
12gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G... 40 0.34
13dbj|AB081587.1| Prunus dulcis genes for S-locus F-Box protein c,... 40 0.34
14emb|CT025692.15| Mouse DNA sequence from clone RP23-312G18 on ch... 40 0.34
15gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 1.3
16gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosom... 38 1.3
17emb|BX649233.1| Mouse DNA sequence from clone RP24-132M23 on chr... 38 1.3
18ref|NM_111953.2| Arabidopsis thaliana FAD7 (FATTY ACID DESATURAS... 36 5.3
19gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, com... 36 5.3
20gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 36 5.3
21gb|AC034265.9| Mus musculus chromosome 1, clone RP23-180K2, comp... 36 5.3
22gb|AC171499.14| Medicago truncatula clone mth2-157b12, complete ... 36 5.3
23ref|XM_459913.1| Debaryomyces hansenii CBS767 hypothetical prote... 36 5.3
24ref|XM_983931.1| PREDICTED: Mus musculus leucine rich repeat con... 36 5.3
25ref|XM_144076.5| PREDICTED: Mus musculus leucine rich repeat con... 36 5.3
26ref|XM_915579.2| PREDICTED: Mus musculus leucine rich repeat con... 36 5.3
27gb|AC122442.4| Mus musculus BAC clone RP24-230D14 from chromosom... 36 5.3
28gb|AC133172.4| Mus musculus BAC clone RP24-273H5 from chromosome... 36 5.3
29gb|AC130549.4| Mus musculus BAC clone RP24-456I3 from chromosome... 36 5.3
30gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC... 36 5.3
31gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complet... 36 5.3
32gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, comple... 36 5.3
33gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, co... 36 5.3
34gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, comp... 36 5.3
35emb|AL929401.8| Human DNA sequence from clone RP11-366E13 on chr... 36 5.3
36emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 36 5.3
37emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 36 5.3
38emb|AL603707.5| Mouse DNA sequence from clone RP23-422L16 on chr... 36 5.3
39gb|AC011591.9| Homo sapiens, clone RP11-118B18, complete sequence 36 5.3
40gb|AC152395.9| Mus musculus chromosome 15, clone RP23-391D2, com... 36 5.3
41gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, com... 36 5.3
42gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, comple... 36 5.3
43gb|AY102158.1| Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, compl... 36 5.3
44gb|AF140058.1|SEG_ATFAD1 Arabidopsis thaliana fatty acid desatur... 36 5.3
45dbj|AK160116.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 36 5.3
46dbj|AK078190.1| Mus musculus adult male olfactory brain cDNA, RI... 36 5.3
47dbj|AK045936.1| Mus musculus adult male corpora quadrigemina cDN... 36 5.3
48gb|AF389295.1|AF389295 Arabidopsis thaliana AT3g11170/F9F8_4 mRN... 36 5.3
49dbj|AK038658.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 36 5.3
50gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-4... 36 5.3
51emb|BX824950.1|CNS0A5PZ Arabidopsis thaliana Full-length cDNA Co... 36 5.3
52emb|BX823863.1|CNS0A5G7 Arabidopsis thaliana Full-length cDNA Co... 36 5.3
53gb|AC134920.3| Homo sapiens BAC clone RP13-544G15 from 4, comple... 36 5.3
54emb|BX823702.1|CNS0A4NN Arabidopsis thaliana Full-length cDNA Co... 36 5.3
55gb|AC026480.6|AC026480 Arabidopsis thaliana chromosome 1 BAC F15... 36 5.3
56gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11... 36 5.3
57gb|AC108718.13| Homo sapiens 3 BAC RP11-246A10 (Roswell Park Can... 36 5.3
58ref|XM_233624.3| PREDICTED: Rattus norvegicus similar to hypothe... 36 5.3
59ref|XM_578430.1| PREDICTED: Rattus norvegicus LOC502928 (LOC5029... 36 5.3
60dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 36 5.3
61dbj|D26019.1|ATHFADIP Arabidopsis thaliana mRNA for plastid fatt... 36 5.3
62dbj|D14007.1|ATHFAD7 Arabidopsis thaliana fad7 gene for omega-3-... 36 5.3
63gb|AC147871.3| Monodelphis domestica clone VMRC6-42O6, complete ... 36 5.3
64gb|AC156791.1| Mus musculus BAC clone RP24-250L13 from 9, comple... 36 5.3
65gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell ... 36 5.3
66gb|AC136516.3| Mus musculus BAC clone RP23-223E24 from 7, comple... 36 5.3
67emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in... 36 5.3
68gb|AC124592.6| Mus musculus BAC clone RP23-137M18 from 15, compl... 36 5.3
69emb|AL732439.18| Mouse DNA sequence from clone RP23-361M1 on chr... 36 5.3
70emb|BX000694.9| Mouse DNA sequence from clone RP23-30B5 on chrom... 36 5.3
71gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, com... 36 5.3
72gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 36 5.3
73emb|AL611982.26| Mouse DNA sequence from clone RP23-348F1 on chr... 36 5.3
74gb|L22961.1|ATHCPFADD Arabidopsis thaliana chloroplast omega-3 f... 36 5.3
75emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chr... 36 5.3
76dbj|AP000356.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 36 5.3
77dbj|AP001033.6| Homo sapiens genomic DNA, chromosome 18p clone:R... 36 5.3
78emb|AL731698.10| Mouse DNA sequence from clone RP23-161B3 on chr... 36 5.3 
>ref|NM_007131.2| Homo sapiens zinc finger protein 75 (D8C6) (ZNF75), mRNA
          Length = 5583

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   acctctctctcactcacctat 21
           |||||||||||||||||||||
Sbjct: 789 acctctctctcactcacctat 769
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>gb|AC146267.3| Pan troglodytes BAC clone CH251-55N11 from X, complete sequence
          Length = 172439

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      acctctctctcactcacctat 21
              |||||||||||||||||||||
Sbjct: 146649 acctctctctcactcacctat 146669
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>gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome 17, complete sequence
          Length = 162550

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     acctctctctcactcacctatacat 25
             ||||||||||||||||||| |||||
Sbjct: 96885 acctctctctcactcacctttacat 96861
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>emb|AL450472.14| Human DNA sequence from clone RP11-265D19 on chromosome X Contains
            the 5' end of the ZNF75 gene for zinc finger protein 75
            (D8C6), gene FLJ23614, two novel genes, the 5' end of a
            novel gene, a novel pseudogene and four CpG islands,
            complete sequence
          Length = 177877

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    acctctctctcactcacctat 21
            |||||||||||||||||||||
Sbjct: 2697 acctctctctcactcacctat 2717
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>emb|AL831984.2|HSM803291 Homo sapiens mRNA; cDNA DKFZp451F083 (from clone DKFZp451F083);
           complete cds
          Length = 5582

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 1   acctctctctcactcacctat 21
           |||||||||||||||||||||
Sbjct: 789 acctctctctcactcacctat 769
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>gb|AC005628.4| Homo sapiens PAC clone RP4-613C23 from Xq23, complete sequence
          Length = 117489

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     acctctctctcactcacctat 21
             |||||||||||||||||||||
Sbjct: 48364 acctctctctcactcacctat 48384
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>gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosome 17, complete
             sequence
          Length = 183626

 Score = 42.1 bits (21), Expect = 0.086
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     acctctctctcactcacctatacat 25
             ||||||||||||||||||| |||||
Sbjct: 15234 acctctctctcactcacctttacat 15210
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>gb|AC142305.1| Pan troglodytes BAC clone RP43-130P22 from 7, complete sequence
          Length = 173535

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acctctctctcactcaccta 20
             ||||||||||||||||||||
Sbjct: 94883 acctctctctcactcaccta 94864
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>emb|AL590488.13| Human DNA sequence from clone RP11-71B19 on chromosome 6 Contains part
             of the UTRN gene for utrophin (homologous to dystrophin)
             (DRP, DRP1, DMDL). Contains two CpG islands, complete
             sequence
          Length = 129479

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    cacctatacatcatcatctc 34
             ||||||||||||||||||||
Sbjct: 84081 cacctatacatcatcatctc 84062
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>gb|AC018728.6| Homo sapiens chromosome 7 clone RP11-206N24, complete sequence
          Length = 181935

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acctctctctcactcaccta 20
             ||||||||||||||||||||
Sbjct: 38586 acctctctctcactcaccta 38605
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>gb|AC009401.3|AC009401 Homo sapiens PAC clone RP4-603O16 from 7q31-q35, complete sequence
          Length = 122079

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acctctctctcactcaccta 20
             ||||||||||||||||||||
Sbjct: 89733 acctctctctcactcaccta 89752
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>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence
          Length = 173844

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     acctctctctcactcaccta 20
             ||||||||||||||||||||
Sbjct: 95183 acctctctctcactcaccta 95164
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>dbj|AB081587.1| Prunus dulcis genes for S-locus F-Box protein c, Sc-RNase, S
             haplotype-specific F-box protein c, complete cds
          Length = 71953

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    catcatcatctcctctgcct 42
             ||||||||||||||||||||
Sbjct: 70558 catcatcatctcctctgcct 70539
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>emb|CT025692.15| Mouse DNA sequence from clone RP23-312G18 on chromosome 17, complete
             sequence
          Length = 177741

 Score = 40.1 bits (20), Expect = 0.34
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    acctatacatcatcatctcc 35
             ||||||||||||||||||||
Sbjct: 93609 acctatacatcatcatctcc 93590
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 14     tcacctatacatcatcatctcct 36
              ||||||||||||| |||||||||
Sbjct: 794233 tcacctatacatcttcatctcct 794211
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>gb|AC126046.3| Mus musculus BAC clone RP23-176P24 from chromosome 19, complete sequence
          Length = 240536

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      ctctctctcactcacctat 21
              |||||||||||||||||||
Sbjct: 146767 ctctctctcactcacctat 146785
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>emb|BX649233.1| Mouse DNA sequence from clone RP24-132M23 on chromosome X, complete
             sequence
          Length = 37178

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ctctctctcactcacctat 21
             |||||||||||||||||||
Sbjct: 22693 ctctctctcactcacctat 22675
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>ref|NM_111953.2| Arabidopsis thaliana FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty
           acid desaturase AT3G11170 (FAD7) mRNA, complete cds
          Length = 1825

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 285 acatcatcatctcctctg 302
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>gb|AC116895.12| Mus musculus chromosome 8, clone RP24-531C8, complete sequence
          Length = 170041

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      cctctctctcactcacct 19
              ||||||||||||||||||
Sbjct: 106322 cctctctctcactcacct 106339
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>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
             sequence
          Length = 1783081

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 1     acctctctctcactcacc 18
             ||||||||||||||||||
Sbjct: 70704 acctctctctcactcacc 70721
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>gb|AC034265.9| Mus musculus chromosome 1, clone RP23-180K2, complete sequence
          Length = 218310

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      cctctctctcactcacct 19
              ||||||||||||||||||
Sbjct: 209041 cctctctctcactcacct 209058
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>gb|AC171499.14| Medicago truncatula clone mth2-157b12, complete sequence
          Length = 81116

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 6     tctctcactcacctatacatca 27
             |||||| |||||||||||||||
Sbjct: 67256 tctctctctcacctatacatca 67277
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>ref|XM_459913.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E14531g)
           partial mRNA
          Length = 1665

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 23  catcatcatctcctctgcctaa 44
           |||| |||||||||||||||||
Sbjct: 199 catcctcatctcctctgcctaa 178
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>ref|XM_983931.1| PREDICTED: Mus musculus leucine rich repeat containing 38 (Lrrc38),
            mRNA
          Length = 2332

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                              
Query: 6    tctctcactcacctatacatcatcatctcctctg 39
            ||||||||  |||||| ||||||||||| |||||
Sbjct: 1162 tctctcacagacctattcatcatcatcttctctg 1195
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>ref|XM_144076.5| PREDICTED: Mus musculus leucine rich repeat containing 38 (Lrrc38),
            mRNA
          Length = 2332

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                              
Query: 6    tctctcactcacctatacatcatcatctcctctg 39
            ||||||||  |||||| ||||||||||| |||||
Sbjct: 1162 tctctcacagacctattcatcatcatcttctctg 1195
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>ref|XM_915579.2| PREDICTED: Mus musculus leucine rich repeat containing 38 (Lrrc38),
            mRNA
          Length = 2332

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                              
Query: 6    tctctcactcacctatacatcatcatctcctctg 39
            ||||||||  |||||| ||||||||||| |||||
Sbjct: 1162 tctctcacagacctattcatcatcatcttctctg 1195
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>gb|AC122442.4| Mus musculus BAC clone RP24-230D14 from chromosome 19, complete sequence
          Length = 180516

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 16     acctatacatcatcatct 33
              ||||||||||||||||||
Sbjct: 111971 acctatacatcatcatct 111954
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>gb|AC133172.4| Mus musculus BAC clone RP24-273H5 from chromosome 18, complete sequence
          Length = 206797

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 1     acctctctctcactcacc 18
             ||||||||||||||||||
Sbjct: 70307 acctctctctcactcacc 70324
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>gb|AC130549.4| Mus musculus BAC clone RP24-456I3 from chromosome 7, complete
            sequence
          Length = 160449

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 22   acatcatcatctcctctg 39
            ||||||||||||||||||
Sbjct: 8149 acatcatcatctcctctg 8166
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>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete
             sequence
          Length = 101284

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 22    acatcatcatctcctctg 39
             ||||||||||||||||||
Sbjct: 16029 acatcatcatctcctctg 16012
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>gb|AC122844.4| Mus musculus BAC clone RP23-152A2 from 7, complete sequence
          Length = 194266

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    acctatacatcatcatct 33
             ||||||||||||||||||
Sbjct: 65001 acctatacatcatcatct 65018
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>gb|AC084391.1| Mus musculus BAC clone RP23-294I17 from 1, complete sequence
          Length = 166182

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     cctctctctcactcacct 19
             ||||||||||||||||||
Sbjct: 63535 cctctctctcactcacct 63518
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>gb|AC102692.6| Mus musculus chromosome 18, clone RP24-491K18, complete sequence
          Length = 225042

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 1    acctctctctcactcacc 18
            ||||||||||||||||||
Sbjct: 4560 acctctctctcactcacc 4577
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>gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, complete sequence
          Length = 171002

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctatacatcatcatctcc 35
             ||||||||||||||||||
Sbjct: 76563 ctatacatcatcatctcc 76580
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>emb|AL929401.8| Human DNA sequence from clone RP11-366E13 on chromosome X Contains the
             gene for a novel protein similar to 40S ribosomal protein
             S26 (RPS26) and two CpG islands, complete sequence
          Length = 194095

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 22    acatcatcatctcctctg 39
             ||||||||||||||||||
Sbjct: 68027 acatcatcatctcctctg 68010
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 23      catcatcatctcctctgcctaa 44
               |||| |||||||||||||||||
Sbjct: 1095623 catcctcatctcctctgcctaa 1095644
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 23      catcatcatctcctctgc 40
               ||||||||||||||||||
Sbjct: 4935872 catcatcatctcctctgc 4935855
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>emb|AL603707.5| Mouse DNA sequence from clone RP23-422L16 on chromosome 11 Contains the
              3' end of the Sat2 gene for spermidine/spermine N1-acetyl
              transferase 2, a ribosomal potein S15A (Rps15a) pseudogene,
              a ubiquitin-like 5 (Ubl5) pseudogene, the Fxr2h gene for
              autosomal homolog of fragile X mental retardation gene 2,
              the Sox15 gene for SRY-box containing gene 15, the Mpdu1
              gene for mannose-P-dolichol utilization defect 1, the Cd68
              gene for CD68 antigen, the Eif4a1 gene for eukaryotic
              translation initiation factor 4A1, the gene for
              sentrin/SUMO-specific protease Smt3ip1, the Tnfsf13 and
              Tnfsf12 genes for tumor necrosis factor (ligand)
              superfamily members 13 and 12, three novel genes, a
              ribosomal protein L13 (Rpl13) pseudogene, the Polr2a gene
              for polymerase (RNA) II (DNA directed) polypeptide A, the
              Amac1 gene for acyl-malonyl condensing enzyme, the gene for
              a novel BTB/POZ domain containing C2H2 type zinc finger
              protein, the Chrnb1 gene for nicotinic cholinergic receptor
              beta polypeptide 1 (muscle), the Fgf11 gene for fibroblast
              growth factor 11, a novel pseudogene, the gene for the
              ortholog of human and rat neuroligin 2 NLGN2, the gene for
              a novel protein of unknown function (DUF423) family member,
              the Plscr3 gene for phospholipid scramblase 3, the 3' end
              of the Tnk1 gene for non-receptor tyrosine kinase 1 and
              nine CpG islands, complete sequence
          Length = 234182

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 2      cctctctctcactcacct 19
              ||||||||||||||||||
Sbjct: 226818 cctctctctcactcacct 226801
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>gb|AC011591.9| Homo sapiens, clone RP11-118B18, complete sequence
          Length = 124779

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 25     tcatcatctcctctgcct 42
              ||||||||||||||||||
Sbjct: 110362 tcatcatctcctctgcct 110345
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>gb|AC152395.9| Mus musculus chromosome 15, clone RP23-391D2, complete sequence
          Length = 210006

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     cctctctctcactcacct 19
             ||||||||||||||||||
Sbjct: 23039 cctctctctcactcacct 23022
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>gb|AC160633.3| Mus musculus chromosome 8, clone RP23-407P24, complete sequence
          Length = 203628

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 2     cctctctctcactcacct 19
             ||||||||||||||||||
Sbjct: 60765 cctctctctcactcacct 60748
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>gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, complete sequence
          Length = 195576

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      ctctctctcactcaccta 20
              ||||||||||||||||||
Sbjct: 188435 ctctctctcactcaccta 188452
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>gb|AY102158.1| Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, complete cds
          Length = 1341

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 127 acatcatcatctcctctg 144
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>gb|AF140058.1|SEG_ATFAD1 Arabidopsis thaliana fatty acid desaturase (FAD7) gene, partial
          sequence
          Length = 419

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 22 acatcatcatctcctctg 39
          ||||||||||||||||||
Sbjct: 52 acatcatcatctcctctg 69
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>dbj|AK160116.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420049N21 product:hypothetical protein,
           full insert sequence
          Length = 1410

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                             
Query: 6   tctctcactcacctatacatcatcatctcctctg 39
           ||||||||  |||||| ||||||||||| |||||
Sbjct: 251 tctctcacagacctattcatcatcatcttctctg 284
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>dbj|AK078190.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430407N05 product:hypothetical
            protein, full insert sequence
          Length = 2190

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                              
Query: 6    tctctcactcacctatacatcatcatctcctctg 39
            ||||||||  |||||| ||||||||||| |||||
Sbjct: 1136 tctctcacagacctattcatcatcatcttctctg 1169
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>dbj|AK045936.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230324O09
           product:hypothetical protein, full insert sequence
          Length = 1878

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                             
Query: 6   tctctcactcacctatacatcatcatctcctctg 39
           ||||||||  |||||| ||||||||||| |||||
Sbjct: 713 tctctcacagacctattcatcatcatcttctctg 746
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>gb|AF389295.1|AF389295 Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, complete cds
          Length = 1825

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 285 acatcatcatctcctctg 302
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>dbj|AK038658.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230053A07 product:hypothetical protein,
            full insert sequence
          Length = 2179

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                              
Query: 6    tctctcactcacctatacatcatcatctcctctg 39
            ||||||||  |||||| ||||||||||| |||||
Sbjct: 1125 tctctcacagacctattcatcatcatcttctctg 1158
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>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence
          Length = 127058

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 2      cctctctctcactcacct 19
              ||||||||||||||||||
Sbjct: 124791 cctctctctcactcacct 124774
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>emb|BX824950.1|CNS0A5PZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH85ZB08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1528

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 170 acatcatcatctcctctg 187
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>emb|BX823863.1|CNS0A5G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZC03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1513

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 159 acatcatcatctcctctg 176
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>gb|AC134920.3| Homo sapiens BAC clone RP13-544G15 from 4, complete sequence
          Length = 74312

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     ctctctctcactcaccta 20
             ||||||||||||||||||
Sbjct: 65198 ctctctctcactcaccta 65215
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>emb|BX823702.1|CNS0A4NN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS68ZH01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1554

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 189 acatcatcatctcctctg 206
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>gb|AC026480.6|AC026480 Arabidopsis thaliana chromosome 1 BAC F15E12 genomic sequence,
            complete sequence
          Length = 90248

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 15   cacctatacatcatcatc 32
            ||||||||||||||||||
Sbjct: 4598 cacctatacatcatcatc 4581
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>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete
             sequence
          Length = 103517

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 22    acatcatcatctcctctg 39
             ||||||||||||||||||
Sbjct: 37251 acatcatcatctcctctg 37268
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>gb|AC108718.13| Homo sapiens 3 BAC RP11-246A10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 66513

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 24    atcatcatctcctctgcc 41
             ||||||||||||||||||
Sbjct: 56604 atcatcatctcctctgcc 56587
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>ref|XM_233624.3| PREDICTED: Rattus norvegicus similar to hypothetical protein MGC37548
            (predicted) (LOC313681), mRNA
          Length = 1797

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                              
Query: 6    tctctcactcacctatacatcatcatctcctctg 39
            ||||||||  |||||| ||||||||||| |||||
Sbjct: 1642 tctctcacagacctattcatcatcatcttctctg 1675
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>ref|XM_578430.1| PREDICTED: Rattus norvegicus LOC502928 (LOC502928), mRNA
          Length = 300

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                             
Query: 6   tctctcactcacctatacatcatcatctcctctg 39
           ||||||||  |||||| ||||||||||| |||||
Sbjct: 145 tctctcacagacctattcatcatcatcttctctg 178
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 23      catcatcatctcctctgc 40
               ||||||||||||||||||
Sbjct: 8163128 catcatcatctcctctgc 8163145
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>dbj|D26019.1|ATHFADIP Arabidopsis thaliana mRNA for plastid fatty acid desaturase,
           complete cds
          Length = 1662

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 258 acatcatcatctcctctg 275
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>dbj|D14007.1|ATHFAD7 Arabidopsis thaliana fad7 gene for omega-3-desaturase, complete cds
          Length = 2569

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 362 acatcatcatctcctctg 379
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>gb|AC147871.3| Monodelphis domestica clone VMRC6-42O6, complete sequence
          Length = 142435

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     ctctctctcactcaccta 20
             ||||||||||||||||||
Sbjct: 82890 ctctctctcactcaccta 82873
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>gb|AC156791.1| Mus musculus BAC clone RP24-250L13 from 9, complete sequence
          Length = 165073

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    tcatcatctcctctgcct 42
             ||||||||||||||||||
Sbjct: 51641 tcatcatctcctctgcct 51624
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>gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172749

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 17    cctatacatcatcatctcctctgcct 42
             ||||| ||||||||||||||| ||||
Sbjct: 29645 cctatccatcatcatctcctcagcct 29670
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>gb|AC136516.3| Mus musculus BAC clone RP23-223E24 from 7, complete sequence
          Length = 179611

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 22     acatcatcatctcctctg 39
              ||||||||||||||||||
Sbjct: 151904 acatcatcatctcctctg 151921
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>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete
              sequence
          Length = 231807

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 2      cctctctctcactcacct 19
              ||||||||||||||||||
Sbjct: 215746 cctctctctcactcacct 215763
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>gb|AC124592.6| Mus musculus BAC clone RP23-137M18 from 15, complete sequence
          Length = 204483

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 3      ctctctctcactcacctataca 24
              ||||||||||| ||||||||||
Sbjct: 136592 ctctctctcacacacctataca 136571
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>emb|AL732439.18| Mouse DNA sequence from clone RP23-361M1 on chromosome X, complete
             sequence
          Length = 140367

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 21    tacatcatcatctcctct 38
             ||||||||||||||||||
Sbjct: 41454 tacatcatcatctcctct 41437
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>emb|BX000694.9| Mouse DNA sequence from clone RP23-30B5 on chromosome 4, complete
             sequence
          Length = 55045

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tatacatcatcatctcct 36
             ||||||||||||||||||
Sbjct: 11513 tatacatcatcatctcct 11496
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>gb|AC161865.4| Mus musculus chromosome 19, clone RP23-218F7, complete sequence
          Length = 206019

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    acctatacatcatcatct 33
             ||||||||||||||||||
Sbjct: 17419 acctatacatcatcatct 17436
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      ctctctctcactcaccta 20
              ||||||||||||||||||
Sbjct: 750881 ctctctctcactcaccta 750864
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>emb|AL611982.26| Mouse DNA sequence from clone RP23-348F1 on chromosome 4, complete
              sequence
          Length = 171559

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 30/34 (88%)
 Strand = Plus / Plus

                                                
Query: 6      tctctcactcacctatacatcatcatctcctctg 39
              ||||||||  |||||| ||||||||||| |||||
Sbjct: 157206 tctctcacagacctattcatcatcatcttctctg 157239
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>gb|L22961.1|ATHCPFADD Arabidopsis thaliana chloroplast omega-3 fatty acid desaturase
           (Fadd) gene, complete cds
          Length = 1525

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 22  acatcatcatctcctctg 39
           ||||||||||||||||||
Sbjct: 136 acatcatcatctcctctg 153
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>emb|AL732476.12| Mouse DNA sequence from clone RP23-131A6 on chromosome 4, complete
              sequence
          Length = 194554

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 4      tctctctcactcacctat 21
              ||||||||||||||||||
Sbjct: 127589 tctctctcactcacctat 127606
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>dbj|AP000356.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1995A5
          Length = 163795

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     tctctctcactcacctat 21
             ||||||||||||||||||
Sbjct: 38958 tctctctcactcacctat 38975
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>dbj|AP001033.6| Homo sapiens genomic DNA, chromosome 18p clone:RP11-888D10, complete
             sequences
          Length = 200891

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 24    atcatcatctcctctgcc 41
             ||||||||||||||||||
Sbjct: 34249 atcatcatctcctctgcc 34232
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>emb|AL731698.10| Mouse DNA sequence from clone RP23-161B3 on chromosome 2, complete
             sequence
          Length = 61072

 Score = 36.2 bits (18), Expect = 5.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     ctctctctcactcaccta 20
             ||||||||||||||||||
Sbjct: 22448 ctctctctcactcaccta 22431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 576,212
Number of Sequences: 3902068
Number of extensions: 576212
Number of successful extensions: 150185
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149940
Number of HSP's gapped (non-prelim): 245
length of query: 44
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 24
effective length of database: 17,155,003,908
effective search space: 411720093792
effective search space used: 411720093792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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