ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17c03 |
|---|---|
| Clone Library Name | barley_pub |
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 155 bits (391), Expect = 1e-37 Identities = 85/174 (48%), Positives = 106/174 (60%), Gaps = 8/174 (4%) Frame = +2 Query: 68 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDG--SVLVKNLYLSCDPYMRPKMSRP--- 232 +++V+LKDYV G+PTE+ + +G SVLVKNLYLSCDPYMR +M +P Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64 Query: 233 ---LHQSYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAML 403 L Q+YT PG PI GYGVS ++ S P GDL+WG+ WE+YSVI P T Sbjct: 65 TAALAQAYT----PGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVI-TPMTHAH 119 Query: 404 TKIQPDDGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGDXXXXXXXXXXXXQLV 565 KIQ D VPLSYYTG+LGMPG+TAY GF+ + S K G+ QLV Sbjct: 120 FKIQHTD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLV 172
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 154 bits (389), Expect = 2e-37 Identities = 83/169 (49%), Positives = 103/169 (60%), Gaps = 3/169 (1%) Frame = +2 Query: 68 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGS--VLVKNLYLSCDPYMRPKMSRPLHQ 241 +++V+ KD+V G+P E+ +GS VLVKNLYLSCDPYMR +M +P Sbjct: 4 NKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPDPS 63 Query: 242 SYTA-AFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQP 418 S A A+ PG PI GYGVS V+ S P GDL+WG+ GWE+YSVI P M KIQ Sbjct: 64 SALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVI-TPMAHMHFKIQH 122 Query: 419 DDGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGDXXXXXXXXXXXXQLV 565 D VPLSYYTG+LGMPG+TAY GF+ + S K G+ QLV Sbjct: 123 TD-VPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLV 170
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 84.7 bits (208), Expect = 2e-16 Identities = 58/152 (38%), Positives = 77/152 (50%) Frame = +2 Query: 65 KSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 244 ++RR VL G P + L V +G VL++ +YLS DPYMR +MS S Sbjct: 15 RNRRWVLASRPHGAPVPENFRL-EEDDVATPGEGQVLLRTVYLSLDPYMRGRMSD--EPS 71 Query: 245 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPDD 424 Y+ G + G VS VV S+ P +GD V G +GW+DY + L K+ Sbjct: 72 YSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYDISSGD---DLVKLGDHP 128 Query: 425 GVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 P S+ GVLGMPG TAY+G IG K G+ Sbjct: 129 QNP-SWSLGVLGMPGFTAYMGLLDIGQPKEGE 159
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 79.3 bits (194), Expect = 7e-15 Identities = 52/153 (33%), Positives = 73/153 (47%) Frame = +2 Query: 62 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 241 ++++ LK + G+PT++ EL + +G VL++ L+LS DPYMR R Sbjct: 2 VRAKNWTLKKHFHGHPTDSDFEL-KTVELPPLNNGEVLLEALFLSVDPYMRLGSKR---- 56 Query: 242 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 421 G + G V+ VV S P G LV +GW +S+ L PD Sbjct: 57 -----LKEGDTMMGQQVARVVESKNPAWPVGTLVLAHSGWASHSISDGQQLEKLLTEWPD 111 Query: 422 DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 +PLS G +GMPG+TAY G I AK GD Sbjct: 112 T-LPLSLALGTVGMPGITAYFGLLEICGAKSGD 143
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 76.3 bits (186), Expect = 6e-14 Identities = 50/153 (32%), Positives = 73/153 (47%) Frame = +2 Query: 62 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 241 +K++ LK + +G PT++ EL + ++G VL++ L+LS DPYMR R Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFEL-KTVELPPLKNGEVLLEALFLSVDPYMRIASKR---- 56 Query: 242 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 421 GA + G V+ VV S AG +V +GW + + L PD Sbjct: 57 -----LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPD 111 Query: 422 DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 +PLS G +GMPGLTAY G + K G+ Sbjct: 112 K-LPLSLALGTIGMPGLTAYFGLLEVCGVKGGE 143
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 75.5 bits (184), Expect = 1e-13 Identities = 50/153 (32%), Positives = 73/153 (47%) Frame = +2 Query: 62 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 241 ++++ LK + GYPT + EL A + ++G VL++ L+L+ DPYMR R Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFEL-KTAELPPLKNGEVLLEALFLTVDPYMRVAAKR---- 56 Query: 242 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 421 G + G V++VV S + G +V GW +S+ L PD Sbjct: 57 -----LKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 111 Query: 422 DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 +PLS G +GMPGLTAY G I K G+ Sbjct: 112 T-IPLSLALGTVGMPGLTAYFGLLEICGVKGGE 143
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 73.9 bits (180), Expect = 3e-13 Identities = 49/153 (32%), Positives = 73/153 (47%) Frame = +2 Query: 62 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 241 ++++ LK + EG+PT+++ EL + +G VL++ L+LS DPYMR + Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELR-TTELPPLNNGEVLLEALFLSVDPYMRVAAKK---- 56 Query: 242 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 421 G + G V+ VV S G +V + GW +S+ L PD Sbjct: 57 -----LKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPD 111 Query: 422 DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 +PLS G +GMPGLTAY G I K G+ Sbjct: 112 K-LPLSLALGTVGMPGLTAYFGLLDICGLKGGE 143
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 73.6 bits (179), Expect = 4e-13 Identities = 49/153 (32%), Positives = 72/153 (47%) Frame = +2 Query: 62 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 241 ++++ LK + EG+PT+ + EL + +G VL++ L+LS DPYMR + Sbjct: 2 VQAKSWTLKKHFEGFPTDGNFEL-KTTELPPLNNGEVLLEALFLSVDPYMRVAAKK---- 56 Query: 242 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 421 G + G V+ VV S G +V + GW +S+ L PD Sbjct: 57 -----LKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWPD 111 Query: 422 DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 +PLS G +GMPGLTAY G I K G+ Sbjct: 112 K-LPLSLALGTVGMPGLTAYFGLLDICGVKGGE 143
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 70.9 bits (172), Expect = 2e-12 Identities = 49/153 (32%), Positives = 75/153 (49%) Frame = +2 Query: 62 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 241 ++++ LK + GYPT ++ EL + ++G VL++ L+L+ DPYMR +R L + Sbjct: 2 VRAKSWTLKKHFVGYPTPSNFEL-KTVELPPLKNGEVLLEALFLTVDPYMRIA-ARKLKE 59 Query: 242 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 421 G + G V+ V+ S G +V + GW +S+ L PD Sbjct: 60 --------GDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPD 111 Query: 422 DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPGD 520 +PLS G +GMPGLTAY G I K G+ Sbjct: 112 T-LPLSLTLGTVGMPGLTAYFGLLDICGLKGGE 143
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 65.9 bits (159), Expect = 8e-11 Identities = 50/154 (32%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +2 Query: 71 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 244 +RVVL G P + + + +D +G V V+ LYLS DPYMR KM+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD 63 Query: 245 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM-TGWEDYSVIKAPFTAMLTKIQPD 421 Y A + G G+ V S +A GD V W+ +++ L K+ P Sbjct: 64 YLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDG---NGLEKVDPQ 120 Query: 422 --DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPG 517 DG LSY+ G +GMPGLT+ +G G G Sbjct: 121 LVDG-HLSYFLGAIGMPGLTSLIGVQEKGHISAG 153
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 62.4 bits (150), Expect = 9e-10 Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 5/154 (3%) Frame = +2 Query: 71 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 244 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 245 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM-TGWEDYSVIKAPFTAMLTKIQPD 421 Y + + G G+ + S + GD V W+ ++ L K+ P Sbjct: 64 YITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDG---NSLEKVDPQ 120 Query: 422 --DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPG 517 DG LSY+ G +GMPGLT+ +G G G Sbjct: 121 LVDG-HLSYFLGAIGMPGLTSLIGIQEKGHITAG 153
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 62.4 bits (150), Expect = 9e-10 Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 5/154 (3%) Frame = +2 Query: 71 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 244 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 245 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM-TGWEDYSVIKAPFTAMLTKIQPD 421 Y + + G G+ + S + GD V W+ ++ L K+ P Sbjct: 64 YITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDG---NSLEKVDPQ 120 Query: 422 --DGVPLSYYTGVLGMPGLTAYVGFHHIGSAKPG 517 DG LSY+ G +GMPGLT+ +G G G Sbjct: 121 LVDG-HLSYFLGAIGMPGLTSLIGIQEKGHITAG 153
>YMN1_YEAST (Q03102) Hypothetical 40.0 kDa protein in COX14-COS3 intergenic| region Length = 365 Score = 58.2 bits (139), Expect = 2e-08 Identities = 35/114 (30%), Positives = 57/114 (50%) Frame = +2 Query: 149 DEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRSSTPGVA 328 ++ +DG +L++ YLS DP + +S + ++Y PG I G+ +V+ S + Sbjct: 40 EQLKDGELLLETTYLSNDPAQKFWISS-MDKNYAKGVQPGEIIPARGIGKVLASRNKAFS 98 Query: 329 AGDLVWGMTGWEDYSVIKAPFTAMLTKIQPDDGVPLSYYTGVLGMPGLTAYVGF 490 GD V +TGW +++I L K+ + L +Y VLG LTAY F Sbjct: 99 PGDYVSAVTGWTTHAIISQENVQGLRKLDKNKVGKLWWYLSVLGGTSLTAYFIF 152
>TAOK2_MOUSE (Q6ZQ29) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand| and one amino acid protein 2) Length = 1055 Score = 32.7 bits (73), Expect = 0.73 Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 3/77 (3%) Frame = -1 Query: 516 PGFAEPMWWNPTYAVRPGMPR---TPV**DSGTPSSGWILVSMAVKGALMTL*SSQPVMP 346 PG P W P PG P P SGTP G +L+ L S Sbjct: 967 PGMPPPAWRQPALLAPPGPPNWLGPPT--QSGTPRGGALLLLRNSPQPLRRAASGGSSGE 1024 Query: 345 HTRSPAATPGVEDRTTS 295 + PAA PG R+TS Sbjct: 1025 NVGPPAAVPGPLSRSTS 1041
>PDXJ_NEIMC (Q9RML6) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 32.3 bits (72), Expect = 0.96 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 520 VARLRGADVVEPHVRREARHAEDAGVVGQRHAV 422 VA GAD++ H+R + RH +DA V ++A+ Sbjct: 30 VAETHGADLITMHLREDRRHIKDADVFAVKNAI 62
>PDXJ_NEIMB (Q9K0V9) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 32.3 bits (72), Expect = 0.96 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 520 VARLRGADVVEPHVRREARHAEDAGVVGQRHAV 422 VA GAD++ H+R + RH +DA V ++A+ Sbjct: 30 VAETHGADLITMHLREDRRHIKDADVFAVKNAI 62
>PDXJ_NEIMA (Q9RQV9) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 32.3 bits (72), Expect = 0.96 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 520 VARLRGADVVEPHVRREARHAEDAGVVGQRHAV 422 VA GAD++ H+R + RH +DA V ++A+ Sbjct: 30 VAETHGADLITMHLREDRRHIKDADVFAVKNAI 62
>PDXJ_NEIG1 (Q5F6P1) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 32.3 bits (72), Expect = 0.96 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -3 Query: 520 VARLRGADVVEPHVRREARHAEDAGVVGQRHAV 422 VA GAD++ H+R + RH +DA V ++A+ Sbjct: 30 VAETHGADLITMHLREDRRHIKDADVFAVKNAI 62
>CINA_GEOSL (Q74GV1) CinA-like protein| Length = 413 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = -3 Query: 511 LRGADVVEPHVRREARHAEDAGVVGQRHAVVGLDLGEHGREGGL----DDAVVLPAGHAP 344 LRG +VV+ + R A DAG+ RH VG D GE G+ DAV++ G P Sbjct: 13 LRG-EVVDTNAARIAARLADAGLAVGRHLTVGDDEGEIEAALGMLAPAHDAVIVTGGLGP 71
>SYE_TOBAC (Q43794) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 569 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Frame = +2 Query: 158 EDGSVLVKN---LYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRS----ST 316 +D +L+K+ L + + +S PL++ T A G PI GVSEV +S Sbjct: 409 QDAVLLLKDGIDLITDSEKALSSLLSYPLYE--TLASAEGKPILEDGVSEVAKSLLAAYD 466 Query: 317 PGVAAGDLVWGMTGWEDYS 373 G +G L G GW+ ++ Sbjct: 467 SGELSGALAEGQPGWQKWA 485
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 30.8 bits (68), Expect = 2.8 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%) Frame = +2 Query: 128 LLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSR----------PLHQSYTAAFVPGAPI 277 L+PA P ++ V K ++ P RPK +R P H S VP + Sbjct: 216 LVPAPPDRSSQAPHVQAKAEDVAASPVPRPKPARAKKQATHRLVPCHTSIPGMVVPPPEM 275 Query: 278 TGYGVSEVVRSSTP-------GVAAGDLVWGMTGWEDY 370 + + V++++ TP ++ W ++ W +Y Sbjct: 276 SIFDVADIIGHDTPVEVIDVASQSSSKASWTISEWAEY 313
>PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 248 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = -3 Query: 523 RVARLRGADVVEPHVRREARHAEDAGVVGQRHAVVGLDLGEHGREGGLDDAVVLPAGHAP 344 ++A GAD + H+R + RH DA + G + L + + D+ + H P Sbjct: 34 KIAEQAGADGITAHLREDRRHITDADIDG---LMAALSVPLNFEMAATDEMQKIALRHKP 90 Query: 343 HEV 335 H V Sbjct: 91 HAV 93
>PDXJ_ANASP (Q8Z080) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 239 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 520 VARLRGADVVEPHVRREARHAEDAGVVGQRHAV 422 +A L GAD + H+R + RH +D V RH V Sbjct: 31 LAELGGADGITVHLREDRRHIQDRDVQLLRHTV 63
>PDXJ_CHRVO (Q7NWC0) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 520 VARLRGADVVEPHVRREARHAEDAGVVGQR 431 VA GAD++ H+R + RH +DA V R Sbjct: 31 VAESSGADLITLHLREDRRHIQDADVKAMR 60
>MATB_NEUCR (P36981) Mating- type protein a-1 (Mt a-1)| Length = 382 Score = 30.0 bits (66), Expect = 4.8 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Frame = +2 Query: 104 YPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFV--PGAPI 277 Y + H E+ P + SV+V N++ P++R K ++ T + P Sbjct: 126 YRKDHHREIREQNPGLHNNEISVIVGNMWRDEQPHIREKYFNMSNEIKTRLLLENPDYRY 185 Query: 278 TGYGVSEVVRSSTPGVAA--------GDLVWGMTGWEDYSVIKAPFTAMLTKIQPDDG 427 ++ R +P + G+L+WG ED ++I+ F ++ + DDG Sbjct: 186 NPRRSQDIRRRVSPYLKIKLLNYDVNGNLLWGTVNAEDAALIRTHFHGVVRVEEMDDG 243
>MYO1A_MOUSE (O88329) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) (Fragment) Length = 909 Score = 29.6 bits (65), Expect = 6.2 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +2 Query: 41 RRRSMAELKSRRVVLKD-YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 214 R S K++ +LK + EG P EA ++ P A +VL+KNLY Y+R Sbjct: 529 RDLSQTMWKAQHPLLKSLFPEGNPKEASLKRPPTAGTQFKNSVAVLMKNLYSKNPNYIR 587
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 29.6 bits (65), Expect = 6.2 Identities = 19/85 (22%), Positives = 37/85 (43%) Frame = +2 Query: 35 PRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 214 P ++ L+ + +D E T A ++ L ++ ++ ++LYL DP +R Sbjct: 509 PTHQQGQPALELKEESFRDPAEVLGTGAEVDYLEQFGTSSFKESALRKQSLYLKFDPLLR 568 Query: 215 PKMSRPLHQSYTAAFVPGAPITGYG 289 RP+ + + + GA T G Sbjct: 569 DSPGRPVPVATETSSMHGANETPSG 593
>P60_LISGR (Q01835) Protein p60 precursor (Invasion-associated protein)| Length = 511 Score = 29.3 bits (64), Expect = 8.1 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = +2 Query: 248 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPDDG 427 T G +T + VV ++T VA+GD +WG+ +V + L K+ D Sbjct: 7 TIVSAAGIAVTAFAAPSVVSANTVVVASGDTLWGIASKTGTTVDQ---LKQLNKLDSDRI 63 Query: 428 VP 433 VP Sbjct: 64 VP 65
>MOLR_ECOLI (P33345) Molybdate metabolism regulator| Length = 1264 Score = 29.3 bits (64), Expect = 8.1 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +2 Query: 17 ARSPVHPRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAP--VDEAEDGS 169 A S + P R+ +LK+ R + ++ YP A LLPAAP EA+D + Sbjct: 678 AASELAPAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAAPGKAGEAQDNA 730
>ASK1_ASHGO (Q75DE8) DASH complex subunit ASK1 (Outer kinetochore protein ASK1)| (Associated with spindles and kinetochores protein 1) Length = 181 Score = 29.3 bits (64), Expect = 8.1 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Frame = +2 Query: 110 TEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSY----TAAFVPGAP 274 TE H+ +P + DE +DGS L + + R K+S L Q Y +++FV +P Sbjct: 102 TEGHVLAVPVSSDDEPDDGSTLQRQ-------HKRRKLSLQLQQRYGSSSSSSFVSRSP 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.136 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,762,825 Number of Sequences: 219361 Number of extensions: 1088587 Number of successful extensions: 3418 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3390 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
