ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart17a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 274 3e-70
2dbj|AK107667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 3e-70
3gb|BT016247.1| Zea mays clone Contig80 mRNA sequence 246 7e-62
4ref|XM_483373.1| Oryza sativa (japonica cultivar-group), mRNA 196 6e-47
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 196 6e-47
6dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic D... 196 6e-47
7dbj|AK108985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 6e-47
8gb|AY659033.1| Synthetic construct Peudomonas aeruginosa clone F... 46 0.13
9gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, com... 46 0.13
10gb|AC090093.7| Homo sapiens chromosome 8, clone RP11-656A10, com... 46 0.13
11gb|AE004599.1| Pseudomonas aeruginosa PAO1, section 160 of 529 o... 46 0.13
12gb|CP000081.1| Leishmania major chromosome 35, complete sequence 42 2.0
13gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 42 2.0
14ref|XM_838124.1| Leishmania major strain Friedlin hypothetical p... 42 2.0
15emb|X65483.1|MIMI22G M.intracellulare MI22 gene 42 2.0
16gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 2.0
17ref|NM_141633.1| Drosophila melanogaster CG8135-RA (CG8135), mRNA 42 2.0
18gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, r... 42 2.0
19emb|BX649512.4| Mouse DNA sequence from clone RP24-87G15 on chro... 42 2.0
20gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20... 42 2.0
21gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 2.0
22gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 2.0
23gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.0
24gb|L12235.1|MSG2S19K Mycobacterium avium DNA sequence encoding a... 42 2.0
25gb|L12238.1|MSG18S19K Mycobacterium intracellulare DNA sequence ... 42 2.0
26ref|XM_493927.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
27gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosom... 40 7.8
28gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
29gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.8
30gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
31gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, c... 40 7.8
32gb|AY692740.1| Saccharomyces cerevisiae clone FLH158292.01X YPR1... 40 7.8
33gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.8
34ref|XM_871910.1| PREDICTED: Bos taurus similar to regulator of G... 40 7.8
35ref|XM_957688.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.8
36ref|XM_957721.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.8
37gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.8
38ref|XM_328359.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.8
39ref|XM_328586.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.8
40gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 7.8
41ref|XM_654428.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 7.8
42ref|NM_001032710.1| Takifugu rubripes XK-related protein 2 (LOC4... 40 7.8
43gb|AY190943.1| Drosophila virilis clone DVIF01_25_B23 (D1415) ge... 40 7.8
44ref|XM_745149.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.8
45ref|XM_567067.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.8
46gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosom... 40 7.8
47ref|XM_802898.1| Trypanosoma cruzi strain CL Brener serine/threo... 40 7.8
48ref|XM_805107.1| Trypanosoma cruzi strain CL Brener serine/threo... 40 7.8
49gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence 40 7.8
50gb|U40829.1|YSCP9659 Saccharomyces cerevisiae chromosome XVI cos... 40 7.8
51gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, compl... 40 7.8
52gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete seq... 40 7.8
53gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosom... 40 7.8
54emb|AL593848.14| Human DNA sequence from clone RP13-100B2 on chr... 40 7.8
55ref|XM_504897.1| Yarrowia lipolytica CLIB122, YALI0F02255g predi... 40 7.8
56gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, com... 40 7.8
57emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chr... 40 7.8
58gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.8
59dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 7.8
60gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.8
61ref|XM_625985.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.8
62gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 7.8
63gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome... 40 7.8
64tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 40 7.8
65gb|AY613954.1| Takifugu rubripes XK-related protein 2b mRNA, com... 40 7.8
66dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
67dbj|AB097553.1| Macaca fascicularis brain cDNA clone:QmoA-14276,... 40 7.8
68dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.8
69gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 7.8
70emb|X72087.1|ADVRR Aujeszky's disease virus RR1 and RR2 genes 40 7.8
71emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.8
72gb|AF187883.1|AF187883 Toxoplasma gondii mitochondrial processin... 40 7.8
73gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.8
74gb|AY534265.1| Takifugu rubripes XK-related protein 2 mRNA, comp... 40 7.8
75emb|X80797.1|PVPCA Pseudorabies Virus genomic DNA 40 7.8
76emb|AL929179.6| Mouse DNA sequence from clone RP23-428M4 on chro... 40 7.8
77emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 7.8
78gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, comp... 40 7.8
79gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosom... 40 7.8
80gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 7.8
81dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet... 40 7.8 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  274 bits (138), Expect = 3e-70
 Identities = 227/257 (88%)
 Strand = Plus / Plus

                                                                            
Query: 317      acgacaagaagggggtgctggtggtgcagtcgctgcggaacgtcatcatggggtccacgc 376
                |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 18875551 acgagaagaaggcggtgctggtggtgcagtcgctgcggaacgtgatcatggggtcgacgc 18875610

                                                                            
Query: 377      tcatggccaccacctcggtgctcttctgcacgggcatcgccgccgtgctcagcagcacct 436
                |  |||| || ||  || | |||||||||||||| ||||| || ||||| |||||||| |
Sbjct: 18875611 tggtggcgacgacggcgatcctcttctgcacggggatcgcggcggtgctgagcagcacgt 18875670

                                                                            
Query: 437      actccgtgaagaagccgctcagcgacgccgtgttcggcgcgcacggggagtacatgatgg 496
                || || | ||||||||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 18875671 acaccatcaagaagccgctcagcgacgccgtcttcggcgcccacggcgagtacatgatgg 18875730

                                                                            
Query: 497      cgctncagtacgtggcgctgctgctcgtcttcctcttcgccttcctctgccacaccctca 556
                ||||  |||||||||||||||||||| |||||||| |||||||||||| |||| ||||| 
Sbjct: 18875731 cgctcaagtacgtggcgctgctgctcctcttcctcgtcgccttcctctcccactccctcg 18875790

                                 
Query: 557      ccatctgcttcctcaac 573
                |||||||||||||||||
Sbjct: 18875791 ccatctgcttcctcaac 18875807



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 147      gtggagggagagctacctggacctgatcctgatccc 182
                ||||||||| |||| | ||||||||||| |||||||
Sbjct: 18875275 gtggagggacagcttcttggacctgatcttgatccc 18875310
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>dbj|AK107667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-H04, full
           insert sequence
          Length = 1348

 Score =  274 bits (138), Expect = 3e-70
 Identities = 227/257 (88%)
 Strand = Plus / Plus

                                                                       
Query: 317 acgacaagaagggggtgctggtggtgcagtcgctgcggaacgtcatcatggggtccacgc 376
           |||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 359 acgagaagaaggcggtgctggtggtgcagtcgctgcggaacgtgatcatggggtcgacgc 418

                                                                       
Query: 377 tcatggccaccacctcggtgctcttctgcacgggcatcgccgccgtgctcagcagcacct 436
           |  |||| || ||  || | |||||||||||||| ||||| || ||||| |||||||| |
Sbjct: 419 tggtggcgacgacggcgatcctcttctgcacggggatcgcggcggtgctgagcagcacgt 478

                                                                       
Query: 437 actccgtgaagaagccgctcagcgacgccgtgttcggcgcgcacggggagtacatgatgg 496
           || || | ||||||||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 479 acaccatcaagaagccgctcagcgacgccgtcttcggcgcccacggcgagtacatgatgg 538

                                                                       
Query: 497 cgctncagtacgtggcgctgctgctcgtcttcctcttcgccttcctctgccacaccctca 556
           ||||  |||||||||||||||||||| |||||||| |||||||||||| |||| ||||| 
Sbjct: 539 cgctcaagtacgtggcgctgctgctcctcttcctcgtcgccttcctctcccactccctcg 598

                            
Query: 557 ccatctgcttcctcaac 573
           |||||||||||||||||
Sbjct: 599 ccatctgcttcctcaac 615
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>gb|BT016247.1| Zea mays clone Contig80 mRNA sequence
          Length = 1290

 Score =  246 bits (124), Expect = 7e-62
 Identities = 210/239 (87%)
 Strand = Plus / Plus

                                                                       
Query: 336 ggtggtgcagtcgctgcggaacgtcatcatggggtccacgctcatggccaccacctcggt 395
           ||||||||||||| |||||||||||||||||||||| ||||| |||||||| ||  || |
Sbjct: 357 ggtggtgcagtcggtgcggaacgtcatcatggggtcgacgctgatggccacgacggcgat 416

                                                                       
Query: 396 gctcttctgcacgggcatcgccgccgtgctcagcagcacctactccgtgaagaagccgct 455
            ||||||||||||||| | || || ||||| |||| ||||||| || | |||||||||||
Sbjct: 417 cctcttctgcacgggcgtggcggcggtgctgagcaacacctacaccatcaagaagccgct 476

                                                                       
Query: 456 cagcgacgccgtgttcggcgcgcacggggagtacatgatggcgctncagtacgtggcgct 515
           ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||
Sbjct: 477 cagcgacaccgtgttcggcgcgcacggcgagtacatgatggcgctcaagtacgtggcgct 536

                                                                      
Query: 516 gctgctcgtcttcctcttcgccttcctctgccacaccctcaccatctgcttcctcaacc 574
             ||||  |||||||| ||||||||||||||||| ||||| |||||||||| |||||||
Sbjct: 537 catgctgctcttcctcctcgccttcctctgccactccctcgccatctgcttactcaacc 595
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>ref|XM_483373.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1199

 Score =  196 bits (99), Expect = 6e-47
 Identities = 218/258 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 acgacaagaagggggtgctggtggtgcagtcgctgcggaacgtcatcatggggtccacgc 376
           |||| ||||||| ||||||||||||||||||| || ||||||| || |||||||| ||||
Sbjct: 289 acgagaagaaggcggtgctggtggtgcagtcgatgaggaacgtgataatggggtcgacgc 348

                                                                       
Query: 377 tcatggccaccacctcggtgctcttctgcacgggcatcgccgccgtgctcagcagcacct 436
           | ||||| || ||  |  | ||||||||||| ||| |||||||| | ||||||||||| |
Sbjct: 349 tgatggcgacgacggccatcctcttctgcaccggcgtcgccgccatcctcagcagcacgt 408

                                                                       
Query: 437 actccgtgaagaagccgctcagcgacgccgtgttcggcgcgcacggggagtacatgatgg 496
           || |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 409 acaccgtcaagaagccgctcagcgacgccgtgttcggcgcccacggcgagtacatgatgg 468

                                                                       
Query: 497 cgctncagtacgtggcgctgctgctcgtcttcctcttcgccttcctctgccacaccctca 556
           ||||  |||||||  | || || |||| ||||||| || ||||||||| |||||||  | 
Sbjct: 469 cgctcaagtacgtcaccctcctcctcgccttcctcctctccttcctctcccacaccaccg 528

                             
Query: 557 ccatctgcttcctcaacc 574
           ||||||||  ||||||||
Sbjct: 529 ccatctgcaccctcaacc 546
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  196 bits (99), Expect = 6e-47
 Identities = 218/258 (84%)
 Strand = Plus / Plus

                                                                            
Query: 317      acgacaagaagggggtgctggtggtgcagtcgctgcggaacgtcatcatggggtccacgc 376
                |||| ||||||| ||||||||||||||||||| || ||||||| || |||||||| ||||
Sbjct: 25902510 acgagaagaaggcggtgctggtggtgcagtcgatgaggaacgtgataatggggtcgacgc 25902569

                                                                            
Query: 377      tcatggccaccacctcggtgctcttctgcacgggcatcgccgccgtgctcagcagcacct 436
                | ||||| || ||  |  | ||||||||||| ||| |||||||| | ||||||||||| |
Sbjct: 25902570 tgatggcgacgacggccatcctcttctgcaccggcgtcgccgccatcctcagcagcacgt 25902629

                                                                            
Query: 437      actccgtgaagaagccgctcagcgacgccgtgttcggcgcgcacggggagtacatgatgg 496
                || |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 25902630 acaccgtcaagaagccgctcagcgacgccgtgttcggcgcccacggcgagtacatgatgg 25902689

                                                                            
Query: 497      cgctncagtacgtggcgctgctgctcgtcttcctcttcgccttcctctgccacaccctca 556
                ||||  |||||||  | || || |||| ||||||| || ||||||||| |||||||  | 
Sbjct: 25902690 cgctcaagtacgtcaccctcctcctcgccttcctcctctccttcctctcccacaccaccg 25902749

                                  
Query: 557      ccatctgcttcctcaacc 574
                ||||||||  ||||||||
Sbjct: 25902750 ccatctgcaccctcaacc 25902767
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>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1003_A09
          Length = 150755

 Score =  196 bits (99), Expect = 6e-47
 Identities = 218/258 (84%)
 Strand = Plus / Plus

                                                                         
Query: 317   acgacaagaagggggtgctggtggtgcagtcgctgcggaacgtcatcatggggtccacgc 376
             |||| ||||||| ||||||||||||||||||| || ||||||| || |||||||| ||||
Sbjct: 88297 acgagaagaaggcggtgctggtggtgcagtcgatgaggaacgtgataatggggtcgacgc 88356

                                                                         
Query: 377   tcatggccaccacctcggtgctcttctgcacgggcatcgccgccgtgctcagcagcacct 436
             | ||||| || ||  |  | ||||||||||| ||| |||||||| | ||||||||||| |
Sbjct: 88357 tgatggcgacgacggccatcctcttctgcaccggcgtcgccgccatcctcagcagcacgt 88416

                                                                         
Query: 437   actccgtgaagaagccgctcagcgacgccgtgttcggcgcgcacggggagtacatgatgg 496
             || |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 88417 acaccgtcaagaagccgctcagcgacgccgtgttcggcgcccacggcgagtacatgatgg 88476

                                                                         
Query: 497   cgctncagtacgtggcgctgctgctcgtcttcctcttcgccttcctctgccacaccctca 556
             ||||  |||||||  | || || |||| ||||||| || ||||||||| |||||||  | 
Sbjct: 88477 cgctcaagtacgtcaccctcctcctcgccttcctcctctccttcctctcccacaccaccg 88536

                               
Query: 557   ccatctgcttcctcaacc 574
             ||||||||  ||||||||
Sbjct: 88537 ccatctgcaccctcaacc 88554
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>dbj|AK108985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F05, full
           insert sequence
          Length = 1199

 Score =  196 bits (99), Expect = 6e-47
 Identities = 218/258 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 acgacaagaagggggtgctggtggtgcagtcgctgcggaacgtcatcatggggtccacgc 376
           |||| ||||||| ||||||||||||||||||| || ||||||| || |||||||| ||||
Sbjct: 289 acgagaagaaggcggtgctggtggtgcagtcgatgaggaacgtgataatggggtcgacgc 348

                                                                       
Query: 377 tcatggccaccacctcggtgctcttctgcacgggcatcgccgccgtgctcagcagcacct 436
           | ||||| || ||  |  | ||||||||||| ||| |||||||| | ||||||||||| |
Sbjct: 349 tgatggcgacgacggccatcctcttctgcaccggcgtcgccgccatcctcagcagcacgt 408

                                                                       
Query: 437 actccgtgaagaagccgctcagcgacgccgtgttcggcgcgcacggggagtacatgatgg 496
           || |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 409 acaccgtcaagaagccgctcagcgacgccgtgttcggcgcccacggcgagtacatgatgg 468

                                                                       
Query: 497 cgctncagtacgtggcgctgctgctcgtcttcctcttcgccttcctctgccacaccctca 556
           ||||  |||||||  | || || |||| ||||||| || ||||||||| |||||||  | 
Sbjct: 469 cgctcaagtacgtcaccctcctcctcgccttcctcctctccttcctctcccacaccaccg 528

                             
Query: 557 ccatctgcttcctcaacc 574
           ||||||||  ||||||||
Sbjct: 529 ccatctgcaccctcaacc 546
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>gb|AY659033.1| Synthetic construct Peudomonas aeruginosa clone FLH035775.01F
           PA1735 gene, partial cds
          Length = 888

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 326 agggggtgctggtggtgcagtcg 348
           |||||||||||||||||||||||
Sbjct: 716 agggggtgctggtggtgcagtcg 738
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>gb|AC087354.13| Homo sapiens chromosome 8, clone RP11-398H6, complete sequence
          Length = 184610

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 160    tacctggacctgatcctgatccc 182
              |||||||||||||||||||||||
Sbjct: 144940 tacctggacctgatcctgatccc 144918
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>gb|AC090093.7| Homo sapiens chromosome 8, clone RP11-656A10, complete sequence
          Length = 167115

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 160   tacctggacctgatcctgatccc 182
             |||||||||||||||||||||||
Sbjct: 79386 tacctggacctgatcctgatccc 79364
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>gb|AE004599.1| Pseudomonas aeruginosa PAO1, section 160 of 529 of the complete
            genome
          Length = 10134

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 326  agggggtgctggtggtgcagtcg 348
            |||||||||||||||||||||||
Sbjct: 9647 agggggtgctggtggtgcagtcg 9669
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 511    gcgctgctgctcgtcttcctcttcgccttcctc 543
              |||||||||||||||||| ||| |||| |||||
Sbjct: 500728 gcgctgctgctcgtcttcgtctgcgccgtcctc 500696
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 271     tcggcggcgcgcaggctgtgg 291
               |||||||||||||||||||||
Sbjct: 4357670 tcggcggcgcgcaggctgtgg 4357690
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>ref|XM_838124.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1040)
            partial mRNA
          Length = 3150

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 511  gcgctgctgctcgtcttcctcttcgccttcctc 543
            |||||||||||||||||| ||| |||| |||||
Sbjct: 1347 gcgctgctgctcgtcttcgtctgcgccgtcctc 1315
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>emb|X65483.1|MIMI22G M.intracellulare MI22 gene
          Length = 660

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 409 ggcatcgccgccgtgctcagc 429
           |||||||||||||||||||||
Sbjct: 379 ggcatcgccgccgtgctcagc 399
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 162     cctggacctgatcctgatcccgctg 186
               ||||||||||| |||||||||||||
Sbjct: 6002710 cctggacctgaccctgatcccgctg 6002734
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>ref|NM_141633.1| Drosophila melanogaster CG8135-RA (CG8135), mRNA
          Length = 2777

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 132  gtcggccatggtggtgtggag 152
            |||||||||||||||||||||
Sbjct: 1714 gtcggccatggtggtgtggag 1734
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>gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, region 85D-85D, BAC clone
             BACR19J06, complete sequence
          Length = 175053

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 132   gtcggccatggtggtgtggag 152
             |||||||||||||||||||||
Sbjct: 42389 gtcggccatggtggtgtggag 42409
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>emb|BX649512.4| Mouse DNA sequence from clone RP24-87G15 on chromosome 2, complete
              sequence
          Length = 132230

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 551    ccctcaccatctgcttcctca 571
              |||||||||||||||||||||
Sbjct: 126824 ccctcaccatctgcttcctca 126844
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>gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20 of 118 of the complete
              sequence
          Length = 224614

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 132    gtcggccatggtggtgtggag 152
              |||||||||||||||||||||
Sbjct: 168887 gtcggccatggtggtgtggag 168907
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 181    ccgctggggctgctgctgccg 201
              |||||||||||||||||||||
Sbjct: 303113 ccgctggggctgctgctgccg 303133



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 169     ctgatcctgatcccgctggg 188
               ||||||||||||||||||||
Sbjct: 4328293 ctgatcctgatcccgctggg 4328312
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 450     gccgctcagcgacgccgtgttcggc 474
               |||||||| ||||||||||||||||
Sbjct: 3276894 gccgctcatcgacgccgtgttcggc 3276870
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 409    ggcatcgccgccgtgctcagc 429
              |||||||||||||||||||||
Sbjct: 280997 ggcatcgccgccgtgctcagc 280977
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>gb|L12235.1|MSG2S19K Mycobacterium avium DNA sequence encoding a 19 kDa protein
          Length = 530

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 409 ggcatcgccgccgtgctcagc 429
           |||||||||||||||||||||
Sbjct: 287 ggcatcgccgccgtgctcagc 307
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>gb|L12238.1|MSG18S19K Mycobacterium intracellulare DNA sequence encoding a 19 kDa protein
          Length = 718

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 409 ggcatcgccgccgtgctcagc 429
           |||||||||||||||||||||
Sbjct: 481 ggcatcgccgccgtgctcagc 501
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>ref|XM_493927.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 454 ctcagcgacgccgtgttcggcgcg 477
           ||||||||||||||||||| ||||
Sbjct: 349 ctcagcgacgccgtgttcgccgcg 372
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>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete
             sequence
          Length = 231693

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   aagggggtgctggtggtgca 344
             ||||||||||||||||||||
Sbjct: 48799 aagggggtgctggtggtgca 48818
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>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
              complete sequence
          Length = 164898

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 454    ctcagcgacgccgtgttcggcgcg 477
              ||||||||||||||||||| ||||
Sbjct: 102238 ctcagcgacgccgtgttcgccgcg 102261
to top
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 521     tcgtcttcctcttcgccttcctct 544
               ||||||||||||||| ||||||||
Sbjct: 2268417 tcgtcttcctcttcgtcttcctct 2268440



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 521     tcgtcttcctcttcgccttcctct 544
               ||||||||||||||| ||||||||
Sbjct: 2268405 tcgtcttcctcttcgtcttcctct 2268428
to top
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0072C16, complete sequence
          Length = 159525

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 454  ctcagcgacgccgtgttcggcgcg 477
            ||||||||||||||||||| ||||
Sbjct: 1643 ctcagcgacgccgtgttcgccgcg 1666
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>gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, complete sequence
          Length = 207418

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    ccttcctctgccacaccctc 555
              ||||||||||||||||||||
Sbjct: 106938 ccttcctctgccacaccctc 106919
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>gb|AY692740.1| Saccharomyces cerevisiae clone FLH158292.01X YPR152C gene, complete
           cds
          Length = 1398

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 521 tcgtcttcctcttcgccttcctct 544
           ||||||||||||||| ||||||||
Sbjct: 563 tcgtcttcctcttcgtcttcctct 540
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 330    ggtgctggtggtgcagtcgctgcg 353
              |||||||||||||||| |||||||
Sbjct: 972209 ggtgctggtggtgcagacgctgcg 972232
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>ref|XM_871910.1| PREDICTED: Bos taurus similar to regulator of G-protein signalling
           3 isoform 1, transcript variant 3 (LOC527349), mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 510 ggcgctgctgctcgtcttcctctt 533
           |||||| |||||||||||||||||
Sbjct: 316 ggcgcttctgctcgtcttcctctt 293
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>ref|XM_957688.1| Neurospora crassa OR74A hypothetical protein (NCU07654.1) partial
           mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 524 tcttcctcttcgccttcctc 543
           ||||||||||||||||||||
Sbjct: 221 tcttcctcttcgccttcctc 202
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>ref|XM_957721.1| Neurospora crassa OR74A hypothetical protein (NCU07881.1) partial
           mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 ccacgctcatggccaccacc 390
           ||||||||||||||||||||
Sbjct: 856 ccacgctcatggccaccacc 837
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>gb|AC099741.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-92M3, complete
              sequence
          Length = 249636

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    gtcttcctcttcgccttcct 542
              ||||||||||||||||||||
Sbjct: 189223 gtcttcctcttcgccttcct 189204
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>ref|XM_328359.1| Neurospora crassa OR74A hypothetical protein (NCU07654.1) partial
           mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 524 tcttcctcttcgccttcctc 543
           ||||||||||||||||||||
Sbjct: 221 tcttcctcttcgccttcctc 202
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>ref|XM_328586.1| Neurospora crassa OR74A hypothetical protein (NCU07881.1) partial
           mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 ccacgctcatggccaccacc 390
           ||||||||||||||||||||
Sbjct: 856 ccacgctcatggccaccacc 837
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 503     agtacgtggcgctgctgctc 522
               ||||||||||||||||||||
Sbjct: 2062681 agtacgtggcgctgctgctc 2062662
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>ref|XM_654428.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1916.2), mRNA
          Length = 4446

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 521  tcgtcttcctcttcgccttcctct 544
            ||||||||||||||| ||||||||
Sbjct: 3569 tcgtcttcctcttcgtcttcctct 3546
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>ref|NM_001032710.1| Takifugu rubripes XK-related protein 2 (LOC497080), mRNA
          Length = 1747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 414 cgccgccgtgctcagcagca 433
           ||||||||||||||||||||
Sbjct: 291 cgccgccgtgctcagcagca 310
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>gb|AY190943.1| Drosophila virilis clone DVIF01_25_B23 (D1415) genomic sequence
          Length = 35983

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gctgctgctgccggcgctgt 208
            ||||||||||||||||||||
Sbjct: 6604 gctgctgctgccggcgctgt 6585
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>ref|XM_745149.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g04930) partial
            mRNA
          Length = 2136

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 520  ctcgtcttcctcttcgccttcctc 543
            |||||||||||||||| |||||||
Sbjct: 1005 ctcgtcttcctcttcgtcttcctc 982
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>ref|XM_567067.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNA08250) partial mRNA
          Length = 3169

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 521 tcgtcttcctcttcgccttcctct 544
           ||||||||||||||| ||||||||
Sbjct: 923 tcgtcttcctcttcgtcttcctct 900



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 521 tcgtcttcctcttcgccttcctct 544
           ||||||||||||||| ||||||||
Sbjct: 911 tcgtcttcctcttcgtcttcctct 888
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>gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosome 12, complete
             sequence
          Length = 162663

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   ctgatcccgctggggctgct 194
             ||||||||||||||||||||
Sbjct: 67740 ctgatcccgctggggctgct 67759
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>ref|XM_802898.1| Trypanosoma cruzi strain CL Brener serine/threonine protein
           phosphatase (Tc00.1047053509211.30) partial mRNA
          Length = 2013

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 ggctgctgctgccggcgctg 207
           ||||||||||||||||||||
Sbjct: 262 ggctgctgctgccggcgctg 243
to top
>ref|XM_805107.1| Trypanosoma cruzi strain CL Brener serine/threonine protein
           phosphatase (Tc00.1047053506863.80) partial mRNA
          Length = 1998

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 188 ggctgctgctgccggcgctg 207
           ||||||||||||||||||||
Sbjct: 262 ggctgctgctgccggcgctg 243
to top
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence
          Length = 124254

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   aagggggtgctggtggtgca 344
             ||||||||||||||||||||
Sbjct: 66031 aagggggtgctggtggtgca 66012
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>gb|U40829.1|YSCP9659 Saccharomyces cerevisiae chromosome XVI cosmid 9659
          Length = 43281

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 521   tcgtcttcctcttcgccttcctct 544
             ||||||||||||||| ||||||||
Sbjct: 41851 tcgtcttcctcttcgtcttcctct 41874
to top
>gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, complete sequence
          Length = 167735

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    gtggtgtggagggagagcta 161
              ||||||||||||||||||||
Sbjct: 139331 gtggtgtggagggagagcta 139312
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>gb|AC146747.7| Medicago truncatula clone mth2-14h5, complete sequence
          Length = 129204

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 520   ctcgtcttcctcttcgccttcctc 543
             |||||||||||||||| |||||||
Sbjct: 65110 ctcgtcttcctcttcgtcttcctc 65087
to top
>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence
          Length = 212735

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 523    gtcttcctcttcgccttcct 542
              ||||||||||||||||||||
Sbjct: 144824 gtcttcctcttcgccttcct 144843
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>emb|AL593848.14| Human DNA sequence from clone RP13-100B2 on chromosome 9 Contains the
             3' end of the ADAMTS13 gene for a disintegrin-like and
             metalloprotease (reprolysin type) with thrombospondin type
             1 motif 13, the C9orf7 gene for chromosome 9 open reading
             frame 7, the SLC2A6 gene for solute carrier family 2
             (facilitated glucose transporter) member 6, a novel gene
             and two CpG islands, complete sequence
          Length = 53335

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   ggctgctgctgccggcgctg 207
             ||||||||||||||||||||
Sbjct: 49337 ggctgctgctgccggcgctg 49356
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>ref|XM_504897.1| Yarrowia lipolytica CLIB122, YALI0F02255g predicted mRNA
          Length = 918

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 gacaacgacgacaagaaggg 329
           ||||||||||||||||||||
Sbjct: 13  gacaacgacgacaagaaggg 32
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>gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, complete sequence
          Length = 163375

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 521    tcgtcttcctcttcgccttcctct 544
              |||||||||||||| |||||||||
Sbjct: 162182 tcgtcttcctcttctccttcctct 162159
to top
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the
             gene for a novel protein (3732413I11Rik), a novel gene
             (4930597A21Rik), the 5' end of the Ebf1 gene for early
             B-cell factor 1, a novel gene and a CpG island, complete
             sequence
          Length = 215524

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   cctggacctgatcctgatcc 181
             ||||||||||||||||||||
Sbjct: 68914 cctggacctgatcctgatcc 68933
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 168     cctgatcctgatcccgctgg 187
               ||||||||||||||||||||
Sbjct: 3710090 cctgatcctgatcccgctgg 3710071
to top
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     tcgtcgtcggccatggtggt 146
               ||||||||||||||||||||
Sbjct: 1503490 tcgtcgtcggccatggtggt 1503509
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 516     gctgctcgtcttcctcttcg 535
               ||||||||||||||||||||
Sbjct: 5427950 gctgctcgtcttcctcttcg 5427931
to top
>ref|XM_625985.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_210),
           partial mRNA
          Length = 3258

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 521 tcgtcttcctcttcgccttcctct 544
           ||||||||||||||| ||||||||
Sbjct: 328 tcgtcttcctcttcgtcttcctct 351
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     gctgtggcgggccgtgcggc 238
               ||||||||||||||||||||
Sbjct: 1210875 gctgtggcgggccgtgcggc 1210856
to top
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence
          Length = 197420

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ctgatcccgctggggctgct 194
             ||||||||||||||||||||
Sbjct: 37404 ctgatcccgctggggctgct 37385
to top
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   cttcctcttcgccttcctct 544
             ||||||||||||||||||||
Sbjct: 49136 cttcctcttcgccttcctct 49155
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>gb|AY613954.1| Takifugu rubripes XK-related protein 2b mRNA, complete cds
          Length = 2171

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 414 cgccgccgtgctcagcagca 433
           ||||||||||||||||||||
Sbjct: 218 cgccgccgtgctcagcagca 237
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 454     ctcagcgacgccgtgttcggcgcg 477
               ||||||||||||||||||| ||||
Sbjct: 2907627 ctcagcgacgccgtgttcgccgcg 2907650
to top
>dbj|AB097553.1| Macaca fascicularis brain cDNA clone:QmoA-14276, similar to human
           transient receptor potential cation channel (TRPM4),
           mRNA, NM_017636.2
          Length = 2157

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 366 ggggtccacgctcatggccaccacctcggtgc 397
           |||| |||||| |||||||||||||| |||||
Sbjct: 635 gggggccacgcccatggccaccaccttggtgc 604
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     gcggcgcgcaggctgtgggc 293
               ||||||||||||||||||||
Sbjct: 2976134 gcggcgcgcaggctgtgggc 2976153
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 524     tcttcctcttcgccttcctc 543
               ||||||||||||||||||||
Sbjct: 2326380 tcttcctcttcgccttcctc 2326399
to top
>emb|X72087.1|ADVRR Aujeszky's disease virus RR1 and RR2 genes
          Length = 4080

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  cttcctcttcgccttcctct 544
            ||||||||||||||||||||
Sbjct: 3198 cttcctcttcgccttcctct 3217
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 271     tcggcggcgcgcaggctgtgggcg 294
               |||||||||||||||| |||||||
Sbjct: 3181211 tcggcggcgcgcaggcggtgggcg 3181188
to top
>gb|AF187883.1|AF187883 Toxoplasma gondii mitochondrial processing peptidase alpha subunit
            homolog (MPPA) mRNA, partial cds
          Length = 1914

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 400  ttctgcacgggcatcgccgccgtg 423
            |||||||||||||||| |||||||
Sbjct: 1156 ttctgcacgggcatcgacgccgtg 1179
to top
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 184     ctggggctgctgctgccggcgctg 207
               |||||||||||||||| |||||||
Sbjct: 1856547 ctggggctgctgctgctggcgctg 1856524
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>gb|AY534265.1| Takifugu rubripes XK-related protein 2 mRNA, complete cds
          Length = 1747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 414 cgccgccgtgctcagcagca 433
           ||||||||||||||||||||
Sbjct: 291 cgccgccgtgctcagcagca 310
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>emb|X80797.1|PVPCA Pseudorabies Virus genomic DNA
          Length = 5657

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 525  cttcctcttcgccttcctct 544
            ||||||||||||||||||||
Sbjct: 4775 cttcctcttcgccttcctct 4794
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>emb|AL929179.6| Mouse DNA sequence from clone RP23-428M4 on chromosome 2, complete
             sequence
          Length = 117995

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   gatcctgatcccgctggggc 190
             ||||||||||||||||||||
Sbjct: 76386 gatcctgatcccgctggggc 76405
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    gacaacgacgacaagaaggg 329
              ||||||||||||||||||||
Sbjct: 348169 gacaacgacgacaagaaggg 348150
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>gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, complete sequence
          Length = 202377

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 521    tcgtcttcctcttcgccttcctct 544
              |||||||||||||| |||||||||
Sbjct: 160033 tcgtcttcctcttctccttcctct 160056
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>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence
          Length = 217434

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    aagggggtgctggtggtgca 344
              ||||||||||||||||||||
Sbjct: 157219 aagggggtgctggtggtgca 157238
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    tctccacggccttcggggtc 267
              ||||||||||||||||||||
Sbjct: 699018 tctccacggccttcggggtc 699037
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>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 521    tcgtcttcctcttcgccttcctct 544
              ||||||||||||||| ||||||||
Sbjct: 115073 tcgtcttcctcttcgtcttcctct 115096


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,890,093
Number of Sequences: 3902068
Number of extensions: 4890093
Number of successful extensions: 115216
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112859
Number of HSP's gapped (non-prelim): 2351
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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