>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete
             sequence
          Length = 208029

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 267   gcaaacacgaagcagcacaggt 288
             ||||||||||||||||||||||
Sbjct: 47573 gcaaacacgaagcagcacaggt 47552

>emb|AJ421525.2|ZMA421525 Zea mays mRNA for transglutaminase (tgz15 gene)
          Length = 1748

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 330 cagcagccacaaatccatatgcaagtgcatataccaatcacccctccgcatatcagca 387
           ||||||||||| |  |||||||| ||||||||||||   ||||| | |||||||||||
Sbjct: 775 cagcagccacagactcatatgcaggtgcatataccagctacccccctgcatatcagca 832

>emb|AJ488103.1|ZMA488103 Zea mays mRNA for transglutaminase (tgz21 gene)
          Length = 1910

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 330 cagcagccacaaatccatatgcaagtgcatataccaatcacccctccgcatatcagca 387
           ||||||||||| |  |||||||| ||||||||||||   ||||| | |||||||||||
Sbjct: 775 cagcagccacagactcatatgcaggtgcatataccagctacccccctgcatatcagca 832

>gb|AC091254.77| Mus musculus strain C57BL/6J clone rp23-364j24 map 17, complete
             sequence
          Length = 187696

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 267   gcaaacacgaagcagcacaggt 288
             ||||||||||||||||||||||
Sbjct: 78807 gcaaacacgaagcagcacaggt 78828

>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06,
             complete sequence
          Length = 135774

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 300   agcctgggacagcacaagctgcagcggct 328
             ||||||||||||||||| |||||| ||||
Sbjct: 87694 agcctgggacagcacaatctgcagtggct 87666

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 300      agcctgggacagcacaagctgcagcggct 328
                ||||||||||||||||| |||||| ||||
Sbjct: 11633759 agcctgggacagcacaatctgcagtggct 11633731

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 300      agcctgggacagcacaagctgcagcggct 328
                ||||||||||||||||| |||||| ||||
Sbjct: 11640199 agcctgggacagcacaatctgcagtggct 11640171

>ref|XM_414399.1| PREDICTED: Gallus gallus similar to Ariadne-2 protein homolog
           (ARI-2) (Triad1 protein) (HT005) (LOC416061), mRNA
          Length = 2905

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 315 aagctgcagcggcttcagcagccacaaa 342
           ||||||||||| ||||||||| ||||||
Sbjct: 233 aagctgcagcgacttcagcagacacaaa 206

>ref|XM_873366.1| PREDICTED: Bos taurus similar to pumilio homolog 2, transcript
            variant 8 (LOC540170), mRNA
          Length = 5859

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 309  cagcacaagctgcagcggcttcagcagc 336
            |||||||||||||||||||  |||||||
Sbjct: 1209 cagcacaagctgcagcggcagcagcagc 1236

>ref|XM_864456.1| PREDICTED: Bos taurus similar to pumilio homolog 2, transcript
            variant 7 (LOC540170), mRNA
          Length = 6120

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 309  cagcacaagctgcagcggcttcagcagc 336
            |||||||||||||||||||  |||||||
Sbjct: 1209 cagcacaagctgcagcggcagcagcagc 1236

>ref|XM_852930.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript
            variant 5 (LOC607618), mRNA
          Length = 6108

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 309  cagcacaagctgcagcggcttcagcagc 336
            |||||||||||||||||||  |||||||
Sbjct: 1681 cagcacaagctgcagcggccgcagcagc 1708

>ref|XM_852845.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript
            variant 3 (LOC607618), mRNA
          Length = 6357

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 309  cagcacaagctgcagcggcttcagcagc 336
            |||||||||||||||||||  |||||||
Sbjct: 1681 cagcacaagctgcagcggccgcagcagc 1708

>ref|XM_843995.1| PREDICTED: Canis familiaris similar to pumilio homolog 2, transcript
            variant 1 (LOC607618), mRNA
          Length = 6366

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 309  cagcacaagctgcagcggcttcagcagc 336
            |||||||||||||||||||  |||||||
Sbjct: 1681 cagcacaagctgcagcggccgcagcagc 1708

>emb|X61059.1|KPXYLABG K.pneumoniae xylA and xylB genes for xylose isomerase and
            xylulokinase
          Length = 3225

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 314  caagctgcagcggcttcagcagcc 337
            ||||| ||||||||||||||||||
Sbjct: 3084 caagcggcagcggcttcagcagcc 3061

>emb|BX321882.7| Zebrafish DNA sequence from clone DKEYP-30F1 in linkage group 12,
            complete sequence
          Length = 187475

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  cagcacaagctgcagcggct 328
            ||||||||||||||||||||
Sbjct: 4561 cagcacaagctgcagcggct 4542

>emb|AJ243297.1|HSA243297 Homo sapiens partial RET gene, exons 2 to 20
          Length = 30430

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   cctccctccctggagcaggc 161
             ||||||||||||||||||||
Sbjct: 11993 cctccctccctggagcaggc 11974

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 309     cagcacaagctgcagcggct 328
               ||||||||||||||||||||
Sbjct: 3730903 cagcacaagctgcagcggct 3730884

>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    cctccctccctggagcaggc 161
              ||||||||||||||||||||
Sbjct: 109749 cctccctccctggagcaggc 109730

>gb|U11538.1|HSRETINT13 Human RET proto-oncogene, intron 7, 5'end
          Length = 59

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 cctccctccctggagcaggc 161
           ||||||||||||||||||||
Sbjct: 26  cctccctccctggagcaggc 7

>gb|AC084702.4| Homo sapiens chromosome 18, clone RP11-1133K3, complete sequence
          Length = 141820

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   tgggacagcacaagctgcag 323
             ||||||||||||||||||||
Sbjct: 57963 tgggacagcacaagctgcag 57982

>gb|AC010601.6| Homo sapiens chromosome 16 clone CTA-481E9, complete sequence
          Length = 110222

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   gcaggttgaacagggcatct 218
             ||||||||||||||||||||
Sbjct: 96270 gcaggttgaacagggcatct 96251

>gb|AC018821.4|AC018821 Homo sapiens chromosome 3 clone RP11-294H24 map 3p, complete sequence
          Length = 153879

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    cttcagcagccacaaatcca 346
              ||||||||||||||||||||
Sbjct: 140963 cttcagcagccacaaatcca 140944

>gb|AY665382.1| Drosophila yakuba CG3066 mRNA, partial cds
          Length = 972

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  cctccgctgccccgccttcg 86
           ||||||||||||||||||||
Sbjct: 182 cctccgctgccccgccttcg 201

>gb|AY190962.1| Drosophila willistoni clone DWIF01_6_P12 (D1474) genomic sequence
          Length = 41651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   atccatatgcaagtgcatat 361
             ||||||||||||||||||||
Sbjct: 26585 atccatatgcaagtgcatat 26604

>emb|CR388051.22| Zebrafish DNA sequence from clone CH211-239B6 in linkage group 15,
              complete sequence
          Length = 120027

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 342    atccatatgcaagtgcatat 361
              ||||||||||||||||||||
Sbjct: 111226 atccatatgcaagtgcatat 111207

>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence
          Length = 209168

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 327  cttcagcagccacaaatcca 346
            ||||||||||||||||||||
Sbjct: 9319 cttcagcagccacaaatcca 9300

>gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3p, complete sequence
          Length = 153152

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   cttcagcagccacaaatcca 346
             ||||||||||||||||||||
Sbjct: 64520 cttcagcagccacaaatcca 64501


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,703,875
Number of Sequences: 3902068
Number of extensions: 3703875
Number of successful extensions: 61593
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61509
Number of HSP's gapped (non-prelim): 84
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)