ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart17a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476809.1| Oryza sativa (japonica cultivar-group), mRNA Length = 886 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 184 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 243 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 244 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 303 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 304 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 360 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 361 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 420 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 421 cagcaactgc 430
>ref|XM_506191.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1656_E11.137 mRNA Length = 887 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 186 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 245 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 246 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 305 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 306 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 362 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 363 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 422 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 423 cagcaactgc 432
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 4012546 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 4012605 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 4012606 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 4012665 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 4012666 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 4012722 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 4012723 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 4012782 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 4012783 cagcaactgc 4012792 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Minus Query: 386 ccgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgcc 443 ||||||||| ||||||||||||| ||||||| | |||||||||||||| ||||| Sbjct: 3981167 ccgtcaacaccacccgcgccctcgagctccccgccgcctgcggcgtcaagaccccgcc 3981110 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gacgctgatcggcatgtcgccgtgcc 253 |||| ||||||||||||||||||||| Sbjct: 3703444 gacgatgatcggcatgtcgccgtgcc 3703419 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tcgtggtcgcggcggcgtgcatgct 185 |||||||||||||||||||| |||| Sbjct: 28478379 tcgtggtcgcggcggcgtgcgtgct 28478403
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 115272 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 115331 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 115332 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 115391 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 115392 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 115448 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 115449 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 115508 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 115509 cagcaactgc 115518 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Minus Query: 386 ccgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgcc 443 ||||||||| ||||||||||||| ||||||| | |||||||||||||| ||||| Sbjct: 83893 ccgtcaacaccacccgcgccctcgagctccccgccgcctgcggcgtcaagaccccgcc 83836
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 5404 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 5463 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 5464 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 5523 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 5524 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 5580 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 5581 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 5640 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 5641 cagcaactgc 5650
>dbj|AK104966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C08, full insert sequence Length = 886 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 184 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 243 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 244 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 303 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 304 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 360 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 361 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 420 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 421 cagcaactgc 430
>dbj|AK073569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042C03, full insert sequence Length = 887 Score = 119 bits (60), Expect = 1e-23 Identities = 203/250 (81%), Gaps = 3/250 (1%) Strand = Plus / Plus Query: 207 gtcgacgagcgggtgcacgcagacgctgatcggcatgtcgccgtgcctcaactacatcac 266 |||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 185 gtcgacaagcgggtgcacgcagacgctgctgagcatgtcgccgtgcctcaactacctgac 244 Query: 267 gggcaacgagacggcgccgtccaagtcctgctgctcgcagctcgccgcggtggtgagctc 326 || ||||||||||||||||| ||| |||||| |||| | || |||||||| || Sbjct: 245 cgggaacgagacggcgccgtcggcgtcgtgctgcggcaagctgggcgaggtggtgaagtc 304 Query: 327 caagcccgagtgcctctgcgtcgcgctcgacgccgaccccgccgcgctcgggctcggcgc 386 |||| |||||||| |||||||||||| |||||||| | || |||||||| ||| | Sbjct: 305 gcagccggagtgcctgtgcgtcgcgctcaacgccgacacggcggcgctcggcctcag--- 361 Query: 387 cgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgccgct 446 | ||||| |||||||| ||||||||||||||| ||| ||| ||||||||||| | Sbjct: 362 catcaaccgcacccgcgcgctcggcctccccgacgcctgcaaggtccagacgccgccggt 421 Query: 447 cagcaactgc 456 |||||||||| Sbjct: 422 cagcaactgc 431
>ref|XM_469963.1| Oryza sativa (japonica cultivar-group), mRNA Length = 825 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| |||||||||||| ||||| | | | |||||||||||||| Sbjct: 213 ccgtgcctcaactacatcagcggcaacgagacgtcgccgacgaggacctgctgctcgcag 272 Query: 307 ctcgccgcggtggtg 321 |||||| | |||||| Sbjct: 273 ctcgccaccgtggtg 287
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| |||||||||||| ||||| | | | |||||||||||||| Sbjct: 24101 ccgtgcctcaactacatcagcggcaacgagacgtcgccgacgaggacctgctgctcgcag 24160 Query: 307 ctcgccgcggtggtg 321 |||||| | |||||| Sbjct: 24161 ctcgccaccgtggtg 24175
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| |||||||||||| ||||| | | | |||||||||||||| Sbjct: 32719806 ccgtgcctcaactacatcagcggcaacgagacgtcgccgacgaggacctgctgctcgcag 32719747 Query: 307 ctcgccgcggtggtg 321 |||||| | |||||| Sbjct: 32719746 ctcgccaccgtggtg 32719732 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 1802368 atggcggcgagggcggcgac 1802349
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| |||||||||||| ||||| | | | |||||||||||||| Sbjct: 32810316 ccgtgcctcaactacatcagcggcaacgagacgtcgccgacgaggacctgctgctcgcag 32810257 Query: 307 ctcgccgcggtggtg 321 |||||| | |||||| Sbjct: 32810256 ctcgccaccgtggtg 32810242 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 1802366 atggcggcgagggcggcgac 1802347
>dbj|AK061537.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F10, full insert sequence Length = 999 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| |||||||||||| ||||| | | | |||||||||||||| Sbjct: 211 ccgtgcctcaactacatcagcggcaacgagacgtcgccgacgaggacctgctgctcgcag 270 Query: 307 ctcgccgcggtggtg 321 |||||| | |||||| Sbjct: 271 ctcgccaccgtggtg 285
>dbj|AK058812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-E04, full insert sequence Length = 825 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| |||||||||||| ||||| | | | |||||||||||||| Sbjct: 213 ccgtgcctcaactacatcagcggcaacgagacgtcgccgacgaggacctgctgctcgcag 272 Query: 307 ctcgccgcggtggtg 321 |||||| | |||||| Sbjct: 273 ctcgccaccgtggtg 287
>gb|AY110426.1| Zea mays CL31361_-2 mRNA sequence Length = 608 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 247 ccgtgcctcaactacatcacgggcaacgagacggcgccgtccaagtcctgctgctcgcag 306 ||||||||||||||||||| ||||||| | |||||||| | || |||||||||||| Sbjct: 598 ccgtgcctcaactacatcaacggcaacgtgtcggcgccgccgtcctcgtgctgctcgcag 539 Query: 307 ctcgcc 312 |||||| Sbjct: 538 ctcgcc 533
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 403 gccctcggcctccccgaccagtgcg 427 ||||||||||||||||||||||||| Sbjct: 4008525 gccctcggcctccccgaccagtgcg 4008501 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 471 cacgtcgccctcgtccggcttcagcgcg 498 |||||||||||| |||||| |||||||| Sbjct: 2224744 cacgtcgccctcctccggcgtcagcgcg 2224717
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 366 cgccgcgctcgggctcggcgccgtca 391 |||||||| ||||||||||||||||| Sbjct: 2849944 cgccgcgcgcgggctcggcgccgtca 2849969 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 cgccgcgctcgggctcggcgc 386 ||||||||||||||||||||| Sbjct: 2624657 cgccgcgctcgggctcggcgc 2624677
>ref|XM_476803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 516 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Plus Query: 386 ccgtcaacaagacccgcgccctcggcctccccgaccagtgcggcgtcaagacgccgcc 443 ||||||||| ||||||||||||| ||||||| | |||||||||||||| ||||| Sbjct: 254 ccgtcaacaccacccgcgccctcgagctccccgccgcctgcggcgtcaagaccccgcc 311
>ref|XM_476739.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gacgctgatcggcatgtcgccgtgcc 253 |||| ||||||||||||||||||||| Sbjct: 1180 gacgatgatcggcatgtcgccgtgcc 1155
>ref|XM_506182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0050F10.9 mRNA Length = 2205 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gacgctgatcggcatgtcgccgtgcc 253 |||| ||||||||||||||||||||| Sbjct: 1241 gacgatgatcggcatgtcgccgtgcc 1216
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 367 gccgcgctcgggctcggcgccg 388 |||||||||||||||||||||| Sbjct: 2829341 gccgcgctcgggctcggcgccg 2829320
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gacgctgatcggcatgtcgccgtgcc 253 |||| ||||||||||||||||||||| Sbjct: 47795 gacgatgatcggcatgtcgccgtgcc 47770
>dbj|AK105668.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H12, full insert sequence Length = 2008 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gacgctgatcggcatgtcgccgtgcc 253 |||| ||||||||||||||||||||| Sbjct: 1180 gacgatgatcggcatgtcgccgtgcc 1155
>dbj|AK068262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149M23, full insert sequence Length = 2205 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 gacgctgatcggcatgtcgccgtgcc 253 |||| ||||||||||||||||||||| Sbjct: 1241 gacgatgatcggcatgtcgccgtgcc 1216
>ref|NM_113159.2| Arabidopsis thaliana lipid binding AT3G22600 mRNA, complete cds Length = 784 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 175 gcatgtcgccgtgtctcaactacat 199
>ref|XM_475258.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2328 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 ggcgctcgtcgtggtcgcggcggcg 177 |||||||||||| |||||||||||| Sbjct: 27 ggcgctcgtcgtcgtcgcggcggcg 51
>ref|XM_479489.1| Oryza sativa (japonica cultivar-group), mRNA Length = 423 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tcgtggtcgcggcggcgtgcatgct 185 |||||||||||||||||||| |||| Sbjct: 26 tcgtggtcgcggcggcgtgcgtgct 50
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ggcgctcgtcgtggtcgcggcggcg 177 |||||||||||| |||||||||||| Sbjct: 167256 ggcgctcgtcgtcgtcgcggcggcg 167232
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 381 cggcgccgtcaacaagacccgcgcc 405 |||| |||||||||||||||||||| Sbjct: 1997468 cggcaccgtcaacaagacccgcgcc 1997444
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ggcgctcgtcgtggtcgcggcggcg 177 |||||||||||| |||||||||||| Sbjct: 109833 ggcgctcgtcgtcgtcgcggcggcg 109809
>ref|XM_803794.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503959.40) partial mRNA Length = 1605 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ggtcgcggcggcgtgcatgct 185 ||||||||||||||||||||| Sbjct: 75 ggtcgcggcggcgtgcatgct 55
>gb|AF083791.1| Arabidopsis thaliana clone sps870 unknown mRNA Length = 786 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 153 gcatgtcgccgtgtctcaactacat 177
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 caacaggcacagacccaaggc 26 ||||||||||||||||||||| Sbjct: 212416 caacaggcacagacccaaggc 212436
>dbj|AB120043.1| Streptomyces kasugaensis kasN, kasO, kasP, kasQ, kasR, kasA genes, partial and complete cds, strain:M338-M1 Length = 6860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgcgctcgacgccgaccccg 367 ||||||||||||||||||||| Sbjct: 4679 tcgcgctcgacgccgaccccg 4659
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 348 cgcgctcgacgccgaccccgccgcgctcg 376 |||||||| ||||||||||| |||||||| Sbjct: 73511 cgcgctcgccgccgaccccgacgcgctcg 73483
>dbj|AB246327.1| Arabidopsis thaliana AtXYP8 mRNA for xylogen like protein 8, complete cds Length = 513 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 101 gcatgtcgccgtgtctcaactacat 125
>gb|AY079122.1| Arabidopsis thaliana AT3g22600/F16J14_17 mRNA, complete cds Length = 513 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 101 gcatgtcgccgtgtctcaactacat 125
>gb|AY045650.1| Arabidopsis thaliana AT3g22600/F16J14_17 mRNA, complete cds Length = 784 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 175 gcatgtcgccgtgtctcaactacat 199
>dbj|AB088409.1| Triticum aestivum 1-FFT-A mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2304 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 tgctggccgcgggggcgctcgtcgt 164 ||||||||| ||||||||||||||| Sbjct: 230 tgctggccgtgggggcgctcgtcgt 254
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ggcgctcgtcgtggtcgcggcggcg 177 |||||||||||| |||||||||||| Sbjct: 20854032 ggcgctcgtcgtcgtcgcggcggcg 20854008
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 caacaggcacagacccaaggc 26 ||||||||||||||||||||| Sbjct: 49033 caacaggcacagacccaaggc 49013
>gb|AY085883.1| Arabidopsis thaliana clone 19287 mRNA, complete sequence Length = 782 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 175 gcatgtcgccgtgtctcaactacat 199
>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence Length = 168738 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 478 ccctcgtccggcttcagcgcgccgg 502 ||||||||||||||| ||||||||| Sbjct: 47239 ccctcgtccggcttcggcgcgccgg 47215
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tcgtggtcgcggcggcgtgcatgct 185 |||||||||||||||||||| |||| Sbjct: 44131 tcgtggtcgcggcggcgtgcgtgct 44155
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tcgtggtcgcggcggcgtgcatgct 185 |||||||||||||||||||| |||| Sbjct: 35920 tcgtggtcgcggcggcgtgcgtgct 35944
>gb|AE005104.1| Halobacterium sp. NRC-1 section 135 of 170 of the complete genome Length = 13848 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 cgccgcgctcgggctcggcgccgtc 390 ||||||||||||||||| ||||||| Sbjct: 12665 cgccgcgctcgggctcgccgccgtc 12641
>dbj|AP000731.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F16J14 Length = 47827 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 gcatgtcgccgtgcctcaactacat 263 ||||||||||||| ||||||||||| Sbjct: 44338 gcatgtcgccgtgtctcaactacat 44314
>dbj|AK119672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G07, full insert sequence Length = 686 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 161 tcgtggtcgcggcggcgtgcatgct 185 |||||||||||||||||||| |||| Sbjct: 33 tcgtggtcgcggcggcgtgcgtgct 57
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 510 gacgccgacgtcgtccggagctggg 534 |||||||||||||||||| |||||| Sbjct: 2394889 gacgccgacgtcgtccggcgctggg 2394865
>gb|AC155637.4| Mus musculus 10 BAC RP24-227O16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159189 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 cgccgcgctcgggctcggcgc 386 ||||||||||||||||||||| Sbjct: 112689 cgccgcgctcgggctcggcgc 112669
>gb|AC153695.2| Mus musculus 10 BAC RP23-184L5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse 10 BAC Library) complete sequence Length = 209875 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 caacaggcacagacccaaggc 26 ||||||||||||||||||||| Sbjct: 191050 caacaggcacagacccaaggc 191030
>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08, complete sequence Length = 138054 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 28007 atggcggcgagggcggcgac 27988
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccctcggcctccccgacc 421 |||||||||||||||||||| Sbjct: 1173 cgccctcggcctccccgacc 1154
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 gcgctcgtcgtggtcgcggcggcg 177 |||||||||| ||||||||||||| Sbjct: 1334282 gcgctcgtcgcggtcgcggcggcg 1334305
>ref|XM_470183.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 329 atggcggcgagggcggcgac 310
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ctcgacgccgaccccgccgc 371 |||||||||||||||||||| Sbjct: 74450 ctcgacgccgaccccgccgc 74469
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 tctgcgtcgcgctcgacgccgacc 364 |||||||||||||||| ||||||| Sbjct: 2554193 tctgcgtcgcgctcgaagccgacc 2554170
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 349 gcgctcgacgccgaccccgccgcgctcg 376 ||||||| ||||||| |||||||||||| Sbjct: 3117316 gcgctcgccgccgacgccgccgcgctcg 3117343
>gb|AE008953.1| Agrobacterium tumefaciens str. C58 AT plasmid section 28 of 49 of the complete sequence Length = 10282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 cctcgtccggcttcagcgcg 498 |||||||||||||||||||| Sbjct: 3471 cctcgtccggcttcagcgcg 3452
>gb|AE009016.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 42 of 256 of the complete sequence Length = 10998 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gcgctcgacgccgaccccgccgcg 372 |||| ||||||||||||||||||| Sbjct: 4557 gcgcccgacgccgaccccgccgcg 4580
>gb|AE007900.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 28 of 50 of the complete sequence Length = 9739 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 cctcgtccggcttcagcgcg 498 |||||||||||||||||||| Sbjct: 3181 cctcgtccggcttcagcgcg 3162
>gb|AC005296.2| Homo sapiens X BAC GS1-214D18 (Genome Systems Human BAC Library) complete sequence Length = 191503 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ggacaggaaggaagcagagc 112 |||||||||||||||||||| Sbjct: 65390 ggacaggaaggaagcagagc 65371
>gb|AF547497.2| Hepatitis C virus isolate PF2NC8 polyprotein gene, partial cds Length = 574 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggggcgctcgtcgtggtcgc 170 |||||||||||||||||||| Sbjct: 500 ggggcgctcgtcgtggtcgc 481
>emb|BX842655.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 10/11 Length = 349965 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gcgccctcggcctccccgac 420 |||||||||||||||||||| Sbjct: 92373 gcgccctcggcctccccgac 92392
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 tctgcgtcgcgctcgacgccgacc 364 |||||||||||||||| ||||||| Sbjct: 133508 tctgcgtcgcgctcgaagccgacc 133485
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tgctggccgcgggggcgctcgtcg 163 ||||||||||||||||||| |||| Sbjct: 14753 tgctggccgcgggggcgctggtcg 14776
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tgctggccgcgggggcgctcgtcg 163 ||||||||||||||||||| |||| Sbjct: 127979 tgctggccgcgggggcgctggtcg 128002
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 ggcttcagcgcgccggcggg 506 |||||||||||||||||||| Sbjct: 206668 ggcttcagcgcgccggcggg 206649
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 tctgcgtcgcgctcgacgccgacc 364 |||||||||||||||| ||||||| Sbjct: 24943 tctgcgtcgcgctcgaagccgacc 24920
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 ccgcgggggcgctcgtcgtggtcgcggc 173 ||||||||||||||| || ||||||||| Sbjct: 132101 ccgcgggggcgctcgacgaggtcgcggc 132074
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcggcgcgtcggcgcagtc 209 |||||||||||||||||||| Sbjct: 4514811 ggcggcgcgtcggcgcagtc 4514792
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 31994 atggcggcgagggcggcgac 32013
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gcgctcgacgccgaccccgccgcg 372 |||| ||||||||||||||||||| Sbjct: 452205 gcgcccgacgccgaccccgccgcg 452228
>gb|AE009831.1|AE009831 Pyrobaculum aerophilum strain IM2 section 86 of 201 of the complete genome Length = 10542 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 gcctccgcccccaccacgtcgccc 480 |||||||||| ||||||||||||| Sbjct: 5212 gcctccgccctcaccacgtcgccc 5189
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 cgggggcgctcgtcgtggtcgcggcggc 176 ||||| ||||||||| |||||||||||| Sbjct: 307879 cggggccgctcgtcgcggtcgcggcggc 307906
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 tccggcttcagcgcgccggcggga 507 |||||||||||||||||| ||||| Sbjct: 4077200 tccggcttcagcgcgccgtcggga 4077223
>dbj|AB088410.1| Triticum aestivum 1-FFT-B mRNA for fructan:fructan 1-fructosyltransferase, complete cds Length = 2251 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 140 tgctggccgcgggggcgctcgtcgtggtcgcggcgg 175 ||||||||| || |||||||||||| ||||| |||| Sbjct: 203 tgctggccgtggtggcgctcgtcgtcgtcgccgcgg 238
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tggccggcggcgcgtcggcg 204 |||||||||||||||||||| Sbjct: 27382650 tggccggcggcgcgtcggcg 27382669
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 ctcgacgccgaccccgccgcgctc 375 ||||||||||||| |||||||||| Sbjct: 21245378 ctcgacgccgacctcgccgcgctc 21245355
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccctcggcctccccgacc 421 |||||||||||||||||||| Sbjct: 35287707 cgccctcggcctccccgacc 35287688 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ccgcgccctcggcctccccgacca 422 |||||||||||||||| ||||||| Sbjct: 19769857 ccgcgccctcggcctcgccgacca 19769880
>gb|AF340167.1|AF340167 Streptomyces verticillus polyketide synthase gene, partial cds Length = 6219 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ctcgacgccgaccccgccgc 371 |||||||||||||||||||| Sbjct: 909 ctcgacgccgaccccgccgc 928
>gb|AE004951.1| Pseudomonas aeruginosa PAO1, section 512 of 529 of the complete genome Length = 11555 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cggcgcgtcggcgcagtcga 211 |||||||||||||||||||| Sbjct: 2491 cggcgcgtcggcgcagtcga 2510
>gb|AE004946.1| Pseudomonas aeruginosa PAO1, section 507 of 529 of the complete genome Length = 13075 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ggcggcgagggcggcgacca 139 |||||||||||||||||||| Sbjct: 11855 ggcggcgagggcggcgacca 11836
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 cgctcgacgccgaccccgccgcgc 373 ||||||||||||||| |||||||| Sbjct: 3050866 cgctcgacgccgacctcgccgcgc 3050843
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccctcggcctccccgacc 421 |||||||||||||||||||| Sbjct: 38041 cgccctcggcctccccgacc 38022
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 tggcggcgagggcggcgaccatgc 142 ||||||||| |||||||||||||| Sbjct: 4798568 tggcggcgacggcggcgaccatgc 4798545
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cgccgcgctcgggctcggcg 385 |||||||||||||||||||| Sbjct: 187296 cgccgcgctcgggctcggcg 187315
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ccgcgccctcggcctccccgacca 422 |||||||||||||||| ||||||| Sbjct: 78408 ccgcgccctcggcctcgccgacca 78431
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ccgcgccctcggcctccccgacca 422 |||||||||||||||| ||||||| Sbjct: 126615 ccgcgccctcggcctcgccgacca 126638
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 cgccctcggcctccccgacc 421 |||||||||||||||||||| Sbjct: 99757 cgccctcggcctccccgacc 99738
>dbj|AK121384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127I23, full insert sequence Length = 2001 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 426 atggcggcgagggcggcgac 407
>dbj|AK121270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105L07, full insert sequence Length = 2719 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 ctcgacgccgaccccgccgcgctc 375 ||||||||||||| |||||||||| Sbjct: 366 ctcgacgccgacctcgccgcgctc 389
>dbj|AK105769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E07, full insert sequence Length = 2018 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 atggcggcgagggcggcgac 137 |||||||||||||||||||| Sbjct: 431 atggcggcgagggcggcgac 412
>dbj|AK073473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045C05, full insert sequence Length = 2698 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 399 ccgcgccctcggcctccccgacca 422 |||||||||||||||| ||||||| Sbjct: 290 ccgcgccctcggcctcgccgacca 313
>dbj|AK069882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P09, full insert sequence Length = 2796 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 ctcgacgccgaccccgccgcgctc 375 ||||||||||||| |||||||||| Sbjct: 456 ctcgacgccgacctcgccgcgctc 479
>dbj|AK068351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136K21, full insert sequence Length = 2075 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tggccggcggcgcgtcggcg 204 |||||||||||||||||||| Sbjct: 1874 tggccggcggcgcgtcggcg 1855
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gtgcatgctggccggcggcg 196 |||||||||||||||||||| Sbjct: 2981042 gtgcatgctggccggcggcg 2981061
>gb|AY108176.1| Zea mays PCO101241 mRNA sequence Length = 515 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gagcagctagctagccatcc 63 |||||||||||||||||||| Sbjct: 74 gagcagctagctagccatcc 93
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 ctcgacgccgaccccgccgcgctc 375 ||||||||||||| |||||||||| Sbjct: 116135 ctcgacgccgacctcgccgcgctc 116112
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ggcggcgcgtcggcgcagtc 209 |||||||||||||||||||| Sbjct: 4517364 ggcggcgcgtcggcgcagtc 4517345
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 agctcgccgcggtggtgagc 324 |||||||||||||||||||| Sbjct: 715931 agctcgccgcggtggtgagc 715950
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 ctcgacgccgaccccgccgc 371 |||||||||||||||||||| Sbjct: 17195175 ctcgacgccgaccccgccgc 17195194
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tggccggcggcgcgtcggcg 204 |||||||||||||||||||| Sbjct: 27308250 tggccggcggcgcgtcggcg 27308269
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 tggccggcggcgcgtcggcg 204 |||||||||||||||||||| Sbjct: 50970 tggccggcggcgcgtcggcg 50989
>gb|AF334288.1| Paralamyctes grayi 18S ribosomal RNA gene, complete sequence Length = 1845 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tcgtggtcgcggcggcgtgc 180 |||||||||||||||||||| Sbjct: 1769 tcgtggtcgcggcggcgtgc 1788 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,819,303 Number of Sequences: 3902068 Number of extensions: 3819303 Number of successful extensions: 87445 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81661 Number of HSP's gapped (non-prelim): 5776 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
