>POLG_HCVT5 (O92529) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3018

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 18/35 (51%), Positives = 19/35 (54%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R  R    R   RGRR QPIP A P QGR+   PG
Sbjct: 46  RATRKTSERSQPRGRR-QPIPKARPSQGRTWGQPG 79

>IF2_LACAC (Q5FJN6) Translation initiation factor IF-2|
          Length = 877

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
 Frame = -1

Query: 310 QP*QAGCTTALGNNQEQTDDEEGRKRRS-------QQPRESLRGRRRQPIPPALP-GQGR 155
           +P + G    +  + E++D  E ++R++       Q+PR+ +  R+ +P+P  L   +G 
Sbjct: 240 KPGRKGKNQFVNGHSERSDRSERKRRKNKKHQQEQQKPRKQITKRKERPLPDILVYEEGM 299

Query: 154 SLPDPGKTRRRDP 116
           +  D GK   R+P
Sbjct: 300 NAQDIGKLIHREP 312

>S45A1_HUMAN (Q9Y2W3) Proton-associated sugar transporter A (PAST-A) (Solute|
           carrier family 45 member 1) (Deleted in neuroblastoma 5
           protein) (DNb-5)
          Length = 782

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/72 (30%), Positives = 29/72 (40%)
 Frame = +2

Query: 53  TNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRLPSSAAERFSGLLRP 232
           T L+  S+P   L   S     +  P L      P LP +   + LPS  A  FS  + P
Sbjct: 315 TVLTLVSIPERPLRPPSEKRAAMKSPSLPLPPSPPVLPEEGPGDSLPSHTATNFSSPISP 374

Query: 233 PFPSFLVVGLFL 268
           P P     G F+
Sbjct: 375 PSPLTPKYGSFI 386

>PRDM2_HUMAN (Q13029) PR domain zinc finger protein 2 (PR domain-containing|
           protein 2) (Retinoblastoma protein-interacting
           zinc-finger protein) (Zinc finger protein RIZ)
           (MTE-binding protein) (MTB-ZF) (GATA-3-binding protein
           G3B)
          Length = 1718

 Score = 26.6 bits (57), Expect(2) = 1.8
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = -2

Query: 351 RTYMPPA------QTKNQPSNPSRQAVLPLSATTKNKPTTRKEGNGGLSS 220
           RT  PPA      +T + P  PS    LPLS +T    +  KE +  LSS
Sbjct: 640 RTASPPALPKIKAETDSDPMVPSCSLSLPLSISTTEAVSFHKEKSVYLSS 689



 Score = 23.5 bits (49), Expect(2) = 1.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 229 SQQPRESLRGRRRQPIPPALPGQGRSLPDPGK 134
           S  P  S R +RR   PP+ P    +L D GK
Sbjct: 724 SMLPVTSSRFKRRTSSPPSSPQHSPALRDFGK 755

>THIE_YERPE (Q8ZAQ1) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 215

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
 Frame = -2

Query: 369 HHLLMARTYMP---------PAQTKNQPSNPSRQAVLPLSATTKNKPTTRKEGNGGLS 223
           H L +A+T  P         P QTK  PS+P  Q +  LS   KN P       GG+S
Sbjct: 113 HELAVAKTLRPSYIALGHIFPTQTKQMPSSP--QGLASLSRQVKNTPDYPTVAIGGIS 168

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = -1

Query: 280 LGNNQEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDP 116
           +G   +    +  R+RRS  P  + R R   P PP  P      P P   RRR P
Sbjct: 544 MGKRWQSPVTKSSRRRRSPSPPPARRRRSPSPAPPPPP------PPPPPRRRRSP 592

>KLF5_HUMAN (Q13887) Krueppel-like factor 5 (Intestinal-enriched krueppel-like|
           factor) (Colon krueppel-like factor) (Transcription
           factor BTEB2) (Basic transcription element-binding
           protein 2) (BTE-binding protein 2) (GC box-binding
           protein 2)
          Length = 457

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 390 CSFALGAHHLLMARTYMPPAQTKNQPSNPSRQA 292
           C++ + +  L    TY PP+   ++P +P RQA
Sbjct: 284 CTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQA 316

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -1

Query: 232 RSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDPLL 110
           R +Q   S R RRR P PP    +    P P   RRR P L
Sbjct: 529 RKRQKEPSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSL 569



 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -1

Query: 268 QEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDP 116
           + Q +    R+RRS  P  +   RRR P PP  P + RS   P   RRR P
Sbjct: 530 KRQKEPSPRRRRRSPSPPPA--RRRRSPSPPPPPRRRRS---PSLPRRRSP 575



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 12/79 (15%)
 Frame = +2

Query: 35  SHPPPPTNLSASSLPRFLLP-----QFSRSEERIAPPGLARI-------RQTPSLPRQSR 178
           S PPPP    + SLPR   P     + S S  R +PP   R        R+T S P   +
Sbjct: 556 SPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPK 615

Query: 179 RNRLPSSAAERFSGLLRPP 235
           R   PS  ++R      PP
Sbjct: 616 RRASPSPQSKRRVSHSPPP 634

>KLF5_MOUSE (Q9Z0Z7) Krueppel-like factor 5 (Intestinal-enriched krueppel-like|
           factor) (Transcription factor BTEB2) (Basic
           transcription element-binding protein 2) (BTE-binding
           protein 2)
          Length = 446

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 390 CSFALGAHHLLMARTYMPPAQTKNQPSNPSRQA 292
           C++ + +  L    TY PP+   ++P +P RQA
Sbjct: 273 CTYTMPSQFLPQQATYFPPSPPSSEPGSPDRQA 305

>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 12/97 (12%)
 Frame = +2

Query: 41  PPPPTNLSASSLPRFLLPQFSRSEE--RIAPPGLARIRQTPSLPRQSRRNRLPSSAAER- 211
           PPPP+      LP    P  S ++E  R+    L+    TP LP   R   LP   +ER 
Sbjct: 310 PPPPSRPGPPPLP----PSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERP 365

Query: 212 ---------FSGLLRPPFPSFLVVGLFLVVAESGSTA 295
                     SG L PP P          V+ +GST+
Sbjct: 366 PPPVRDPPGRSGPLPPPPP----------VSRNGSTS 392

>POLG_HCVTR (Q81487) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3022

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R+ R    R   RGRR QP P A P +GRS   PG
Sbjct: 46  REVRKTSERSQPRGRR-QPTPKARPREGRSWAQPG 79

>CX56_CHICK (P29415) Gap junction Cx56 protein (Connexin-56)|
          Length = 510

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +2

Query: 41  PPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRLPSSAAERFSG 220
           PP P  +  ++ P  +LP     + R   P LA +   P     + R R PS+ A   S 
Sbjct: 284 PPAPPVVVTTTAPAPVLP-----DTRAVTPLLAPVTMAPYYAAAAPRTRPPSNTASMASY 338

Query: 221 LLRPPFP 241
            + PP P
Sbjct: 339 PVAPPVP 345

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = -1

Query: 280 LGNNQEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDP 116
           +G   +    + GR+RRS  P  +   RRR+   PA P + R  P P   RRR P
Sbjct: 546 MGKRWQSPVTKSGRRRRSPSPPPT---RRRRSPSPAPPPRRRRTPTP-PPRRRTP 596

>GPR64_MOUSE (Q8CJ12) G-protein coupled receptor 64 precursor|
           (Epididymis-specific protein 6) (Me6 receptor)
          Length = 1009

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 11  PHLCCAVLSHPPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRL 190
           P +C A   H PP ++ S   +P+  +     S+  +A P L     TPS P  ++ + L
Sbjct: 234 PIVCLADQPHGPPLSSSSKPVVPQATIISHVASDFSLAEP-LDHALMTPSTPSLTQESNL 292

Query: 191 PS 196
           PS
Sbjct: 293 PS 294

>Y004_MYCPA (Q9L7L4) UPF0232 protein MAP_0004|
          Length = 181

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 250 EEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDP 116
           EE R     Q +++ RGR   P P  + GQ RS   PG    RDP
Sbjct: 24  EEARAAARAQGKDAGRGRAAAPTPRRVAGQRRSWSGPGPD-ARDP 67

>RNB_HHV2H (P89479) Probable RNA-binding protein|
          Length = 151

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 23  CAVLSHPPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRLPSSA 202
           CA LS P P   +  S +PR             AP    R+ + P +PR+ R  R+P S 
Sbjct: 72  CAALSIPKPSEAVRPSRIPR-------------AP----RVPREPRVPREPREPRVPRSP 114

Query: 203 AE-RFSGLLRPPFP 241
            E R   + R P P
Sbjct: 115 REPRVPRIPRDPRP 128

>DEND_RAT (P50617) Dendrin|
          Length = 653

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/60 (23%), Positives = 31/60 (51%)
 Frame = -2

Query: 396 QECSFALGAHHLLMARTYMPPAQTKNQPSNPSRQAVLPLSATTKNKPTTRKEGNGGLSSP 217
           +E  F + A  +++   Y+P  +T+ +   PS ++ +   +  + KP   +EG G  ++P
Sbjct: 393 REGIFVIDATCVVIKSQYVPTPRTQQRQLAPSGESCIVSDSLRQPKPCLEEEGKGAAANP 452

>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 25/77 (32%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
 Frame = +2

Query: 41  PPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRLPSSAAER--- 211
           PPPP+      LP    P  S    R+    L+    TP LP   R   LP    ER   
Sbjct: 296 PPPPSRPGPPPLP----PTSSDEIPRLPQRNLSLTSPTPPLPSPGRSGPLPPPPTERPPP 351

Query: 212 -------FSGLLRPPFP 241
                   SG L PP P
Sbjct: 352 PVRDPPGRSGPLPPPPP 368

>PTK7_HUMAN (Q13308) Tyrosine-protein kinase-like 7 precursor (Colon carcinoma|
           kinase 4) (CCK-4)
          Length = 1070

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 345 YMPPAQTKNQPSNPSRQAVLPLSATTKNKPTTRKEGNGGLSSPE 214
           + PP Q + Q     ++A +P SAT + KPT + E   G S PE
Sbjct: 504 FTPPPQPQ-QCMGFDKEATVPCSATGREKPTIKWERADGSSLPE 546

>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor|
          Length = 616

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
 Frame = +2

Query: 41  PPPPTNLSASSLPRF--LLPQFSRSEERIAPPG---------LARIRQTPS-LPRQSRRN 184
           PPPP   +   LP +  +LP + R E+ + PPG           R  Q PS L R+   +
Sbjct: 509 PPPPPPSARDELPDWNEVLPPWDREEDEVYPPGPYHPFPNYIRPRTLQPPSALRRRHYHH 568

Query: 185 RLPSS 199
            LP S
Sbjct: 569 ALPPS 573

>POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3020

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R  R    R   RGRR QPIP A   +GRS   PG
Sbjct: 46  RATRKTSERSQPRGRR-QPIPKARRSEGRSWAQPG 79

>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12|
          Length = 586

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 32  LSHPPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRN 184
           L HPPPP++ + SS+     P     +    PP  A I  T ++P +  ++
Sbjct: 212 LGHPPPPSDSANSSVTPIAAPLVVNGKVSGNPPYPAEIIPTSNVPNREEKD 262

>PKSL1_ASPPA (Q12053) Aflatoxin biosynthesis polyketide synthase (PKS)|
          Length = 2109

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 396  QECSFALGAHHLLMARTYMPPAQTKNQPS--NPSRQAVLPLSATT 268
            Q+C  A   H +  A   +PP  T ++PS  +PS++A   +  TT
Sbjct: 1266 QDCKCAAPGHEIKTADYQVPPESTPHRPSKLDPSKEAFPEIKTTT 1310

>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -2

Query: 324 KNQPSNPSRQAVLPLSATTKNKPTTRKEGNGGLSSPENLSAADDGNRFRLLCRGK--EGV 151
           K++  +P +  V     ++  KP   ++G GG  SPE  +AA  G      C+GK   GV
Sbjct: 654 KHKHGSPEKPGV-----SSNTKPAGAEDGTGGDDSPEAAAAAAAGKADGGGCKGKSPHGV 708

Query: 150 CRIRARPGGA 121
            R R     A
Sbjct: 709 RRSRQEAAAA 718

>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 22/67 (32%), Positives = 29/67 (43%)
 Frame = +2

Query: 41  PPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRLPSSAAERFSG 220
           P PP + ++        PQ      R + P L R+ Q PSLP  SR N   S+  +  S 
Sbjct: 123 PRPPVSAASGR------PQDDTDSSRASLPELPRM-QRPSLPDLSRPNTTSSTGMKHSSS 175

Query: 221 LLRPPFP 241
              PP P
Sbjct: 176 APPPPPP 182

>POLG_HCVVO (O92531) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3015

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 17/35 (48%), Positives = 17/35 (48%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R  R    R   RGRR QPIP A   QGR    PG
Sbjct: 46  RATRKTSERSQPRGRR-QPIPKARQSQGRHWAQPG 79

>K1C13_PROAT (Q5K2P4) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)|
           (Keratin-13) (K13)
          Length = 465

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
 Frame = +2

Query: 35  SHPPPPTN--LSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLP-------RQSRRNR 187
           S P PP+    S +S    L+PQ  RS      PG  RI  +PS+P         +  + 
Sbjct: 12  SRPQPPSTRGFSGNSFKSDLIPQSRRSHSVYGTPGSIRI-SSPSVPSAIVSSYSSTLSSA 70

Query: 188 LPSSAAERFSGLLRPPFPSFLVVGLFLVVAESGSTA 295
           LPSS+   + G       SF   G  L++  SG  A
Sbjct: 71  LPSSS---YGGNSFSSSTSFSSGGSDLLLGTSGKEA 103

>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 25/67 (37%), Positives = 28/67 (41%)
 Frame = +2

Query: 41  PPPPTNLSASSLPRFLLPQFSRSEERIAPPGLARIRQTPSLPRQSRRNRLPSSAAERFSG 220
           PPP    S   +PR  LPQ + S    APP  +  R  P  P  S R   P       SG
Sbjct: 310 PPPLPPASNDEIPR--LPQRNLSLTSSAPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG 367

Query: 221 LLRPPFP 241
            L PP P
Sbjct: 368 PLPPPPP 374

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -1

Query: 268 QEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDP 116
           +++     GR+RRS  P  +   RRR+   PA P + R  P P   RRR P
Sbjct: 536 RQKETSPRGRRRRSPSPPPT---RRRRSPSPAPPPRRRRTPTP-PPRRRTP 582

>LIPB1_HUMAN (Q86W92) Liprin-beta-1 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein-binding protein 1)
           (PTPRF-interacting protein-binding protein 1) (hSGT2)
          Length = 1011

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = -1

Query: 289 TTALGNNQEQTDDEEGRK-RRSQQPRESLRGRRRQPIPPALPGQGRSLPD-PGKTRR 125
           +++LGN +++T D E    +++ + R     R    +PP  PGQ  S+ D P  TR+
Sbjct: 464 SSSLGNLKKETSDGEKETIQKTSEDRAPAESRPFGTLPPRPPGQDTSMDDNPFGTRK 520

>POLG_HCVED (O39929) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3007

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R  R    R   RGRR QPIP A   +GRS   PG
Sbjct: 46  RATRKTSERSQPRGRR-QPIPKARRPEGRSWAQPG 79

>IF2_PSEPF (Q3KI84) Translation initiation factor IF-2|
          Length = 837

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 283 ALGNNQEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDP--GKTRRRDPLL 110
           A+ N   Q  +EE R R  ++ R       RQP  P+ P +  + P P     R   P++
Sbjct: 113 AVENAARQKAEEEARVRAEEEAR-------RQPAAPSAPAEAVAAPAPVAEPVREAAPVV 165

Query: 109 AAA 101
           AAA
Sbjct: 166 AAA 168

>TRUD_METCA (Q604M0) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine|
           isomerase D) (tRNA pseudouridylate synthase D)
          Length = 354

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -2

Query: 192 GNRFRLLCRGKEGVC 148
           GNRFR++ RG EGVC
Sbjct: 134 GNRFRIILRGLEGVC 148

>POLG_HCVIN (Q913D4) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3010

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R  R    R   RGRR QPIP A   +GRS   PG
Sbjct: 46  RATRKTSERSQPRGRR-QPIPKARRPEGRSWAQPG 79

>POLG_HCVH9 (Q81754) Genome polyprotein [Contains: Core protein p21 (Capsid|
           protein C) (p21); Core protein p19; Envelope
           glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2
           (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-)
           (p23); Serine protease/N
          Length = 3010

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = -1

Query: 241 RKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           R  R    R   RGRR QPIP A   +GRS   PG
Sbjct: 46  RATRKTSERSQPRGRR-QPIPKARRPEGRSWAQPG 79

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
 Frame = +2

Query: 8   PPHLCCAVLSHPPPPTNLSASSLPRFLLPQFSRSEERIAPPGL----ARIRQTPSLPRQS 175
           PP LC      PPPP  +S   LP    P     +E   PP +    +R R  P L    
Sbjct: 425 PPPLC------PPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRKRGRPPLTPSQ 478

Query: 176 RRNRLPSSAAERFSGLLRPPFPS 244
           R  R  + A    +    PP P+
Sbjct: 479 RAEREAARAGPEGTS---PPTPT 498

>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)|
          Length = 2158

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = -1

Query: 277  GNNQEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPGKTRRRDP 116
            G+++E  D E      S     + RG    P  PALP  G   P P  T    P
Sbjct: 1992 GSDEENLDSETSASTESLLEERAGRGASEGPPAPALPCPGAPTPSPLPTVAAPP 2045

>KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)|
          Length = 1142

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -1

Query: 295 GCTTALGNNQEQTDDEEGRKRRSQQPRESLRGRRRQPIPPALPGQGRSLPDPG 137
           G +   G++++  DD EG    S  P+E +RG        + P    S P PG
Sbjct: 76  GASPMSGSHRQSVDDFEGYGAPSPPPKEDVRGHSSHQSQGSGPLMPASAPYPG 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,435,955
Number of Sequences: 219361
Number of extensions: 1456822
Number of successful extensions: 7371
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 6487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7321
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)