Clone Name | bart16f11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein ... | 28 | 7.1 | 2 | VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein ... | 28 | 9.2 |
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>VANG2_MOUSE (Q91ZD4) Vang-like protein 2 (Van Gogh-like protein 2)| (Loop-tail-associated protein) (Loop-tail protein 1) Length = 521 Score = 28.1 bits (61), Expect = 7.1 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = -1 Query: 90 QEHEDQRIRHCSKQRDGAR 34 ++H D+R RH SK RDG+R Sbjct: 21 RKHRDRRDRHRSKSRDGSR 39
>VANG2_HUMAN (Q9ULK5) Vang-like protein 2 (Van Gogh-like protein 2)| (Strabismus 1) (Loop-tail protein 1 homolog) Length = 521 Score = 27.7 bits (60), Expect = 9.2 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -1 Query: 90 QEHEDQRIRHCSKQRDGAR 34 ++H D+R RH SK RDG R Sbjct: 21 RKHRDRRDRHRSKSRDGGR 39 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,348,681 Number of Sequences: 219361 Number of extensions: 215049 Number of successful extensions: 780 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 773 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 780 length of database: 80,573,946 effective HSP length: 18 effective length of database: 76,625,448 effective search space used: 1839010752 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)