Clone Name | bart16f11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence Length = 216320 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Plus Query: 69 tcctctggtcctcatgctcttgc 91 ||||||||||||||||||||||| Sbjct: 49892 tcctctggtcctcatgctcttgc 49914
>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete sequence Length = 245536 Score = 46.1 bits (23), Expect = 0.025 Identities = 23/23 (100%) Strand = Plus / Minus Query: 69 tcctctggtcctcatgctcttgc 91 ||||||||||||||||||||||| Sbjct: 81103 tcctctggtcctcatgctcttgc 81081
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.098 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cgagagaagagctcgagctcca 43 |||||||||||||||||||||| Sbjct: 12191283 cgagagaagagctcgagctcca 12191262
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 44.1 bits (22), Expect = 0.098 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cgagagaagagctcgagctcca 43 |||||||||||||||||||||| Sbjct: 102742 cgagagaagagctcgagctcca 102721
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 44.1 bits (22), Expect = 0.098 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 cgagagaagagctcgagctcca 43 |||||||||||||||||||||| Sbjct: 125662 cgagagaagagctcgagctcca 125641
>gb|AC003669.1|AC003669 Homo sapiens Xp22 BAC GS-594A7 (Genome Systems Human BAC library) contains Bmx gene, complete sequence Length = 159446 Score = 42.1 bits (21), Expect = 0.39 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 tcctctggtcctcatgctctt 89 ||||||||||||||||||||| Sbjct: 118659 tcctctggtcctcatgctctt 118679
>gb|AC122189.4| Mus musculus BAC clone RP23-36C8 from 1, complete sequence Length = 247309 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gatcctctggtcctcatgct 86 |||||||||||||||||||| Sbjct: 125053 gatcctctggtcctcatgct 125034 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gatcctctggtcctcatgct 86 |||||||||||||||||||| Sbjct: 125018 gatcctctggtcctcatgct 124999
>gb|AC102372.8| Mus musculus chromosome 5, clone RP23-262J12, complete sequence Length = 212548 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctctggtcctcatgctcttg 90 |||||||||||||||||||| Sbjct: 111965 ctctggtcctcatgctcttg 111946
>ref|XM_370512.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG07009.4) partial mRNA Length = 744 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 gagctccatcccgctgctt 54 ||||||||||||||||||| Sbjct: 372 gagctccatcccgctgctt 390
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 cgagctccatcccgctgct 53 ||||||||||||||||||| Sbjct: 18571946 cgagctccatcccgctgct 18571964
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 cgagctccatcccgctgct 53 ||||||||||||||||||| Sbjct: 113085 cgagctccatcccgctgct 113103
>dbj|AP002376.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-349I16, complete sequence Length = 161406 Score = 38.2 bits (19), Expect = 6.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 atcctctggtcctcatgct 86 ||||||||||||||||||| Sbjct: 89383 atcctctggtcctcatgct 89365 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 758,236 Number of Sequences: 3902068 Number of extensions: 758236 Number of successful extensions: 52158 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52075 Number of HSP's gapped (non-prelim): 83 length of query: 129 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 108 effective length of database: 17,151,101,840 effective search space: 1852318998720 effective search space used: 1852318998720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)