ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16f07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY461803.1| Oryza sativa (japonica cultivar-group) Dof28 mRNA, complete cds Length = 879 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 161 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 220 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 221 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 280 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 281 acgggggcac 290
>ref|XM_474359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 621 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 134 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 193 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 194 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 253 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 254 acgggggcac 263
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 145395 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 145336 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 145335 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 145276 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 145275 acgggggcac 145266
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 34691274 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 34691215 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 34691214 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 34691155 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 34691154 acgggggcac 34691145 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 28509422 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 28509363 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || ||||| |||||||||||| | |||||| Sbjct: 28509362 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggc 28509312 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 cactctcttcttcctctcct 125 |||||||||||||||||||| Sbjct: 22035926 cactctcttcttcctctcct 22035907 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 18686919 gccgccgccgccgcccatcc 18686938
>dbj|AK107524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F12, full insert sequence Length = 1096 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 271 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 330 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 331 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 390 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 391 acgggggcac 400
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 89502 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 89443 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 89442 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 89383 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 89382 acgggggcac 89373
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 392 agcaggagaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactaca 451 ||||| || |||||||||||||||| ||| | |||| | ||||||||||||||||||||| Sbjct: 34598 agcagcagcagctggagtgcccgcgctgccgatccaccaacaccaagttctgctactaca 34539 Query: 452 acaactacagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgc 511 |||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 34538 acaactacagcacgtcgcagccgcgccacttctgccgcgcctgccgccgctactggacgc 34479 Query: 512 acggcggcac 521 |||| ||||| Sbjct: 34478 acgggggcac 34469
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 151 bits (76), Expect = 3e-33 Identities = 112/124 (90%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || || ||||||||||||||||||||||||||||||| ||||| Sbjct: 24758060 agtgcccgcggtgcgcgtcgagggacaccaagttctgctactacaacaactacaacacgg 24758001 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgc 526 |||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |||| | Sbjct: 24758000 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24757941 Query: 527 gcaa 530 |||| Sbjct: 24757940 gcaa 24757937 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||| |||||||||| | ||||||||||||||| |||| Sbjct: 23493275 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 23493334 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 23493335 cttgccgccgctactggacgcgcggcggc 23493363 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 ccgcatcgctccttcccgccgccg 292 ||||||||||||| |||||||||| Sbjct: 19192085 ccgcatcgctcctccccgccgccg 19192108
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 151 bits (76), Expect = 3e-33 Identities = 112/124 (90%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || || ||||||||||||||||||||||||||||||| ||||| Sbjct: 24686266 agtgcccgcggtgcgcgtcgagggacaccaagttctgctactacaacaactacaacacgg 24686207 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgc 526 |||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |||| | Sbjct: 24686206 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 24686147 Query: 527 gcaa 530 |||| Sbjct: 24686146 gcaa 24686143 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||| |||||||||| | ||||||||||||||| |||| Sbjct: 23421466 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 23421525 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 23421526 cttgccgccgctactggacgcgcggcggc 23421554 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 ccgcatcgctccttcccgccgccg 292 ||||||||||||| |||||||||| Sbjct: 19118312 ccgcatcgctcctccccgccgccg 19118335
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 151 bits (76), Expect = 3e-33 Identities = 112/124 (90%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || || ||||||||||||||||||||||||||||||| ||||| Sbjct: 65217 agtgcccgcggtgcgcgtcgagggacaccaagttctgctactacaacaactacaacacgg 65158 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgc 526 |||||||||| |||| ||||||| ||||||||||||||||||||| ||||||| |||| | Sbjct: 65157 cgcagccgcggcacttctgccgcgcctgccgccgctactggacgctcggcggctccctcc 65098 Query: 527 gcaa 530 |||| Sbjct: 65097 gcaa 65094
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 429 cgacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccg 488 |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 119629 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 119570 Query: 489 cacctgccgccgctactggacgcacggcggcaccctgcgcaa 530 | ||||||||||||||||||||| ||||||| |||| ||||| Sbjct: 119569 cgcctgccgccgctactggacgctcggcggctccctccgcaa 119528
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 429 cgacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccg 488 |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 23283148 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 23283089 Query: 489 cacctgccgccgctactggacgcacggcggcaccctgcgcaa 530 | ||||||||||||||||||||| ||||||| |||| ||||| Sbjct: 23283088 cgcctgccgccgctactggacgctcggcggctccctccgcaa 23283047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | Sbjct: 9332614 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 9332555 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 9332554 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggc 9332502 Score = 65.9 bits (33), Expect = 1e-07 Identities = 77/89 (86%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca-gcacggcgcagccgcgccactactgccgc 489 |||||||||||||||||| |||||||||| || | ||||||||||||||| |||| Sbjct: 34151851 acaccaagttctgctacttcaacaactactcgctct-cgcagccgcgccacttctgcaag 34151909 Query: 490 acctgccgccgctactggacgcacggcgg 518 || ||||||||||||||||||| |||||| Sbjct: 34151910 acgtgccgccgctactggacgcgcggcgg 34151938 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 21407720 acaccaagttctgctactacaacaactacagc 21407751 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | | ||||||||||||| |||| | Sbjct: 31359620 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 31359561 Query: 491 cctgccgccgctactggac 509 | |||||||| |||||||| Sbjct: 31359560 cgtgccgccggtactggac 31359542 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 3722018 gacaccaagttctgctactacaacaactaca 3722048 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ctgattgccgccgccgccgcc 77 ||||||||||||||||||||| Sbjct: 26687443 ctgattgccgccgccgccgcc 26687423 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 35449854 tgccgccgccgccgcccatc 35449835 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 30114735 gccgccgccgccgcccatcc 30114716 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 8716178 tgccgccgccgccgcccatc 8716197
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 429 cgacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccg 488 |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 23276176 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 23276117 Query: 489 cacctgccgccgctactggacgcacggcggcaccctgcgcaa 530 | ||||||||||||||||||||| ||||||| |||| ||||| Sbjct: 23276116 cgcctgccgccgctactggacgctcggcggctccctccgcaa 23276075 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | Sbjct: 9330509 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 9330450 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 9330449 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggc 9330397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 77/89 (86%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca-gcacggcgcagccgcgccactactgccgc 489 |||||||||||||||||| |||||||||| || | ||||||||||||||| |||| Sbjct: 34242323 acaccaagttctgctacttcaacaactactcgctct-cgcagccgcgccacttctgcaag 34242381 Query: 490 acctgccgccgctactggacgcacggcgg 518 || ||||||||||||||||||| |||||| Sbjct: 34242382 acgtgccgccgctactggacgcgcggcgg 34242410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 21400749 acaccaagttctgctactacaacaactacagc 21400780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | | ||||||||||||| |||| | Sbjct: 31450136 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 31450077 Query: 491 cctgccgccgctactggac 509 | |||||||| |||||||| Sbjct: 31450076 cgtgccgccggtactggac 31450058 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 3722129 gacaccaagttctgctactacaacaactaca 3722159 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ctgattgccgccgccgccgcc 77 ||||||||||||||||||||| Sbjct: 26778766 ctgattgccgccgccgccgcc 26778746 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 35539926 tgccgccgccgccgcccatc 35539907 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 30206157 gccgccgccgccgcccatcc 30206138 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 8714013 tgccgccgccgccgcccatc 8714032
>dbj|AK119803.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-F03, full insert sequence Length = 965 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 429 cgacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccg 488 |||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| Sbjct: 225 cgacaccaagttctgctactacaacaactacaacacgtcgcagccgcgccacttctgccg 284 Query: 489 cacctgccgccgctactggacgcacggcggcaccctgcgcaa 530 | ||||||||||||||||||||| ||||||| |||| ||||| Sbjct: 285 cgcctgccgccgctactggacgctcggcggctccctccgcaa 326
>ref|XM_464857.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1537 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||| |||| Sbjct: 235 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 294 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgcgc 528 ||||||||| ||| ||||||| ||||||||||||||||| || |||||| |||| ||| Sbjct: 295 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 354 Query: 529 aa 530 || Sbjct: 355 aa 356
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||| |||| Sbjct: 8590719 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 8590660 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgcgc 528 ||||||||| ||| ||||||| ||||||||||||||||| || |||||| |||| ||| Sbjct: 8590659 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 8590600 Query: 529 aa 530 || Sbjct: 8590599 aa 8590598 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 27455616 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 27455557 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || |||||||||||||||||| | |||||| Sbjct: 27455556 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggc 27455506 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 30226459 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 30226400 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 30226399 cgcagccgcgccacttctgcaagagctgccgccggtactggac 30226357 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| | Sbjct: 29257605 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 29257546 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 29257545 cgtgccgccgctactggac 29257527 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 33014538 tgccgccgccgccgcccatc 33014519 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 20101739 tgccgccgccgccgcccatc 20101720 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 18485023 gccgccgccgccgcccatcc 18485042
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||| |||| Sbjct: 60042 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 59983 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgcgc 528 ||||||||| ||| ||||||| ||||||||||||||||| || |||||| |||| ||| Sbjct: 59982 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 59923 Query: 529 aa 530 || Sbjct: 59922 aa 59921
>dbj|AK107294.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-C02, full insert sequence Length = 1537 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||| |||| Sbjct: 235 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 294 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgcgc 528 ||||||||| ||| ||||||| ||||||||||||||||| || |||||| |||| ||| Sbjct: 295 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 354 Query: 529 aa 530 || Sbjct: 355 aa 356
>dbj|AB028131.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1572 Score = 123 bits (62), Expect = 6e-25 Identities = 107/122 (87%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||| ||||||| ||||| | | ||||||||||||||||||||||||||||||| |||| Sbjct: 264 tgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcg 323 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgcgc 528 ||||||||| ||| ||||||| ||||||||||||||||| || |||||| |||| ||| Sbjct: 324 cagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgc 383 Query: 529 aa 530 || Sbjct: 384 aa 385
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 115 bits (58), Expect = 2e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgc 489 ||||||||||||||||||||||||||||||| ||||||||||||||| || | ||||||| Sbjct: 65972 gacaccaagttctgctactacaacaactacaacacggcgcagccgcggcatttctgccgc 65913 Query: 490 acctgccgccgctactggacgc 511 | ||||||||||||||||||| Sbjct: 65912 gcgtgccgccgctactggacgc 65891
>gb|AY111473.1| Zea mays CL830_1 mRNA sequence Length = 1414 Score = 99.6 bits (50), Expect = 9e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 |||||||| ||| ||||| | |||| ||||||||||||||||||||||||| | | || Sbjct: 167 tgcccgcgctgctcctccaccaacacaaagttctgctactacaacaactacaacctgacg 226 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcaccctgcgc 528 ||||||||| ||| |||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 227 cagccgcgctacttctgcaagacgtgccgccgctactggacacacggcggcaccctccgc 286 Query: 529 aa 530 || Sbjct: 287 aa 288
>ref|NM_189690.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 116 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 175 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 176 cgtgccgccgctactggacgcgcggcggc 204
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 5013724 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 5013783 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 5013784 cgtgccgccgctactggacgcgcggcggc 5013812 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 408 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggc 467 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | | Sbjct: 27670013 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 27670072 Query: 468 gcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 27670073 gcagccgcgccacctctgccgctcctgccgccgctactggacggccggcggc 27670124 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 37466527 acaccaagttctgctactacaacaactacagc 37466496 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||| ||||||||||| Sbjct: 31844416 gacaccaagttctgctacttcaacaactaca 31844386 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||| ||||||||||| Sbjct: 9735521 aagttctgctacttcaacaactaca 9735545 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 33600547 gccgccgccgccgcccatcc 33600528
>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0001B06 Length = 140304 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 7162 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 7221 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 7222 cgtgccgccgctactggacgcgcggcggc 7250
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 114177 acaccaagttctgctactacaacaactacaacctggcgcagccgcgccacttctgcaagg 114236 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 114237 cgtgccgccgctactggacgcgcggcggc 114265
>emb|X79934.1|ZMDOF2 Z.mays Dof2 mRNA Length = 1037 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 408 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggc 467 ||||||||||||| | || | ||||||||||||||||||||||||||||||| |||| | Sbjct: 59 gtgcccgcggtgcgggtcgcgggacaccaagttctgctactacaacaactacaacacgtc 118 Query: 468 gcagccgcgccact 481 |||||||||||||| Sbjct: 119 gcagccgcgccact 132
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgc 489 ||||||||||||||||||||||||||||||| ||| | ||||||||||||| |||| Sbjct: 9114 gacaccaagttctgctactacaacaactacaacacctcccagccgcgccacttctgcaag 9173 Query: 490 acctgccgccgctactggacgcacggcggcaccctgcgcaa 530 |||||||||||||||||| | |||||||| |||||||| Sbjct: 9174 ggctgccgccgctactggaccaagggcggcacgctgcgcaa 9214
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgc 489 ||||||||||||||||||||||||||||||| |||| |||||||||| |||| |||| Sbjct: 18180471 gacaccaagttctgctactacaacaactacaacacgtcgcagccgcggcacttctgcaag 18180530 Query: 490 acctgccgccgctactggacgcacggcggcaccctgcgcaa 530 | ||||||||||||||||| | |||||| |||| ||||| Sbjct: 18180531 tcgtgccgccgctactggaccaagggcggctccctccgcaa 18180571 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 ttgccgccgccgccgcccatccagc 85 |||||||||||| |||||||||||| Sbjct: 19649771 ttgccgccgccgtcgcccatccagc 19649795
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgc 489 ||||||||||||||||||||||||||||||| |||| |||||||||| |||| |||| Sbjct: 29195 gacaccaagttctgctactacaacaactacaacacgtcgcagccgcggcacttctgcaag 29254 Query: 490 acctgccgccgctactggacgcacggcggcaccctgcgcaa 530 | ||||||||||||||||| | |||||| |||| ||||| Sbjct: 29255 tcgtgccgccgctactggaccaagggcggctccctccgcaa 29295
>emb|AJ000991.1|HVBPBF Hordeum vulgare mRNA for DNA binding protein BPBF Length = 1318 Score = 89.7 bits (45), Expect = 9e-15 Identities = 111/133 (83%) Strand = Plus / Plus Query: 398 agaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaact 457 ||||| |||||||||| ||||||| || | ||||||||||||||||||||||||||| Sbjct: 131 agaaggtggagtgccctcggtgcaagtctggtaacaccaagttctgctactacaacaact 190 Query: 458 acagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcg 517 |||||| | | ||||||||| ||| |||| ||||||||||||||||||| || || | Sbjct: 191 acagcatgtcccagccgcgctacttctgcaaggcctgccgccgctactggacccatggtg 250 Query: 518 gcaccctgcgcaa 530 || |||| ||||| Sbjct: 251 gctccctccgcaa 263
>ref|NM_191985.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 528 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 408 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggc 467 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | | Sbjct: 255 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 314 Query: 468 gcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 315 gcagccgcgccacctctgccgctcctgccgccgctactggacggccggcggc 366
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 408 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggc 467 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | | Sbjct: 78579 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 78638 Query: 468 gcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 78639 gcagccgcgccacctctgccgctcctgccgccgctactggacggccggcggc 78690
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 408 gtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggc 467 ||||||||||||| | ||| || |||||||||||||||| ||||||||||| | | Sbjct: 137307 gtgcccgcggtgcgggagcagggagaccaagttctgctacttcaacaactacaacgtgcg 137366 Query: 468 gcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 137367 gcagccgcgccacctctgccgctcctgccgccgctactggacggccggcggc 137418
>gb|AY955493.2| Triticum aestivum Dof1 mRNA, complete cds Length = 1000 Score = 85.7 bits (43), Expect = 1e-13 Identities = 88/103 (85%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| |||| | |||||||||||||||||||||||||||||| | | Sbjct: 247 agtgcccgcggtgcgagtccaccaacaccaagttctgctactacaacaactacaacctgt 306 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 307 cgcagccgcgccacttctgcaagagctgccgccggtactggac 349
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| | Sbjct: 145409 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctct 145350 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| ||||||| ||||||||||||||||||| | ||||||| Sbjct: 145349 cccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggc 145297
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | Sbjct: 30014 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 29955 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 29954 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggc 29902
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| | Sbjct: 628010 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctct 627951 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| ||||||| ||||||||||||||||||| | ||||||| Sbjct: 627950 cccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggc 627898 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 21410547 acaccaagttctgctactacaacaactacagc 21410578 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 25408147 tgccgccgccgccgcccatc 25408166 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cgctccttcccgccgccggcgcca 298 |||||||||||||||||| ||||| Sbjct: 8034999 cgctccttcccgccgccgccgcca 8035022
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| | Sbjct: 23577 agtgcccgcgctgcgactccaccaacaccaagttctgctactacaacaactactccctct 23636 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 23637 cccagccccgccacttctgcaagacctgccgccgctactggacgcgcggcggc 23689
>emb|X66076.1|ZMMNB1A Z.mays MNB1a mRNA for DNA-binding protein Length = 1225 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgc 489 ||||||||||||||||||||||||||||||| ||| | ||||||||||||| |||| Sbjct: 252 gacaccaagttctgctactacaacaactacaacacctcccagccgcgccacttctgcaag 311 Query: 490 acctgccgccgctactggacgcacggcggcaccctgcgcaa 530 |||||||||||||||||| | || ||||| |||||||| Sbjct: 312 ggctgccgccgctactggaccaagggtggcacgctgcgcaa 352
>emb|X79935.1|ZMDOF3 Z.mays Dof3 mRNA Length = 1230 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||| |||||||||| | ||||||||||||||| |||||| Sbjct: 123 acaccaagttctgctacttcaacaactactccctcacgcagccgcgccacttctgccggg 182 Query: 491 cctgccgccgctactggacgc 511 ||||||||||||||||||||| Sbjct: 183 cctgccgccgctactggacgc 203
>dbj|AK108933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A09, full insert sequence Length = 1520 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| | Sbjct: 276 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactactccctct 335 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 | ||||| ||||||| ||||||| ||||||||||||||||||| | ||||||| Sbjct: 336 cccagccccgccacttctgccgcgcctgccgccgctactggacccgcggcggc 388
>emb|AJ312331.1|HVU312331 Hordeum vulgare partial dof172 gene for dof zinc finger protein, exon 1 Length = 534 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgc 486 |||||||||||||||||||||||||||||||| | ||||||||||||||| |||| Sbjct: 116 acaccaagttctgctactacaacaactacagcctgtcgcagccgcgccacttctgc 171
>gb|AF542507.1| Oryza sativa Dof-like protein 34 mRNA, partial cds Length = 1134 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||||| ||||||||||| ||| |||| | Sbjct: 158 acaccaagttctgctactacaacaactacagcctctcgcagccgcgctacttctgcaaga 217 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 218 cgtgccgccgctactggac 236
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 47338 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 47279 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || |||||||||||||||||| | |||||| Sbjct: 47278 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggc 47228
>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full insert sequence Length = 1744 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 340 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 399 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || |||||||||||||||||| | |||||| Sbjct: 400 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggc 450
>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1550 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 468 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 527 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || |||||||||||||||||| | |||||| Sbjct: 528 cagccgcgctacttctgcaagacgtgccgccgctactggacggagggcggc 578
>emb|AJ312297.1|HVU312297 Hordeum vulgare sed gene for dof zinc finger protein, exons 1-2 Length = 4727 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 |||||| |||||| ||| | | |||||||||||||||||||||||||||||||| | Sbjct: 3662 tgcccgaggtgcaactctaccaacaccaagttctgctactacaacaactacagcctccag 3721 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||| ||| |||| || ||||||||||||||||| Sbjct: 3722 cagccgcgctacttctgcaagacgtgccgccgctactggac 3762
>emb|AJ276357.1|HVU276357 Hordeum vulgare mRNA for dof zinc finger protein (sed gene) Length = 1555 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 |||||| |||||| ||| | | |||||||||||||||||||||||||||||||| | Sbjct: 457 tgcccgaggtgcaactctaccaacaccaagttctgctactacaacaactacagcctccag 516 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||| ||| |||| || ||||||||||||||||| Sbjct: 517 cagccgcgctacttctgcaagacgtgccgccgctactggac 557
>ref|XM_467389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 900 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| | Sbjct: 182 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 241 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 242 cgtgccgccgctactggac 260
>ref|XM_507527.1| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1328 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 335 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 394 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 395 cgcagccgcgccacttctgcaagagctgccgccggtactggac 437
>ref|XM_467571.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1277 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 281 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 340 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 341 cgcagccgcgccacttctgcaagagctgccgccggtactggac 383
>ref|XM_506950.2| PREDICTED Oryza sativa (japonica cultivar-group), B1121A12.10 mRNA Length = 1343 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 341 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 400 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 401 cgcagccgcgccacttctgcaagagctgccgccggtactggac 443
>ref|XM_473536.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 184 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 243 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || ||||| |||||||||||| | |||||| Sbjct: 244 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggc 294
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 212 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 153 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || ||||| |||||||||||| | |||||| Sbjct: 152 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggc 102
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 158097 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 158038 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || ||||| |||||||||||| | |||||| Sbjct: 158037 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggc 157987
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| | Sbjct: 105026 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 105085 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 105086 cgtgccgccgctactggac 105104
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 27376 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 27317 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 27316 cgcagccgcgccacttctgcaagagctgccgccggtactggac 27274
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| | Sbjct: 54950 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 54891 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 54890 cgtgccgccgctactggac 54872
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||| | Sbjct: 147573 acaccaagttctgctactacaataactacagcctctcgcagccgcgctacttctgcaaga 147514 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 147513 cgtgccgccgctactggac 147495
>emb|AJ312327.1|HVU312327 Hordeum vulgare dof155 gene for dof zinc finger protein Length = 986 Score = 69.9 bits (35), Expect = 8e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 402 gctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacag 461 |||| |||||||||||||| ||||| | ||||||| ||||||||||||||||||||| Sbjct: 162 gctgaagtgcccgcggtgcgactccaccaacaccaaattctgctactacaacaactactc 221 Query: 462 cacggcgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcggcac 521 | ||||||| ||||||| |||| | ||||||||||||||||||| ||| ||| | Sbjct: 222 cctctcgcagccccgccacttctgcaaggcatgccgccgctactggacgcgcgggggcgc 281 Query: 522 cct 524 ||| Sbjct: 282 cct 284
>dbj|AK100892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130J11, full insert sequence Length = 1328 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 335 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 394 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 395 cgcagccgcgccacttctgcaagagctgccgccggtactggac 437
>dbj|AK101321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034E07, full insert sequence Length = 1343 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 341 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 400 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 401 cgcagccgcgccacttctgcaagagctgccgccggtactggac 443
>dbj|AK061000.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F09, full insert sequence Length = 1277 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 281 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 340 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 341 cgcagccgcgccacttctgcaagagctgccgccggtactggac 383
>dbj|AK060659.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A11, full insert sequence Length = 1556 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 321 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 380 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || ||||| |||||||||||| | |||||| Sbjct: 381 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggc 431
>dbj|AB028132.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1331 Score = 69.9 bits (35), Expect = 8e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacgg 466 |||||||||||||| || | | |||||||||||||||||||||||||||||| | Sbjct: 324 agtgcccgcggtgcgagtcgaccaacaccaagttctgctactacaacaactacaacctct 383 Query: 467 cgcagccgcgccactactgccgcacctgccgccgctactggac 509 ||||||||||||||| |||| | ||||||||| |||||||| Sbjct: 384 cgcagccgcgccacttctgcaagagctgccgccggtactggac 426
>dbj|AB028129.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 2316 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactacagcacggcg 468 ||||||||||||| ||| | |||||||||||||||||||||||||||||||| | Sbjct: 458 tgcccgcggtgcaactcgacgaacaccaagttctgctactacaacaactacagcctccag 517 Query: 469 cagccgcgccactactgccgcacctgccgccgctactggacgcacggcggc 519 ||||||||| ||| |||| || ||||| |||||||||||| | |||||| Sbjct: 518 cagccgcgctacttctgcaagacgtgccggcgctactggacggagggcggc 568
>ref|XM_470142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1068 Score = 65.9 bits (33), Expect = 1e-07 Identities = 77/89 (86%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca-gcacggcgcagccgcgccactactgccgc 489 |||||||||||||||||| |||||||||| || | ||||||||||||||| |||| Sbjct: 203 acaccaagttctgctacttcaacaactactcgctct-cgcagccgcgccacttctgcaag 261 Query: 490 acctgccgccgctactggacgcacggcgg 518 || ||||||||||||||||||| |||||| Sbjct: 262 acgtgccgccgctactggacgcgcggcgg 290
>ref|NM_197162.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein (OSJNBa0066I08.3), mRNA Length = 2010 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 462 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1130 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 1185
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 462 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 8927 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 8872
>emb|AJ012284.1|TAE012284 Triticum aestivum mRNA for DNA binding protein PBF, partial Length = 993 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/133 (81%) Strand = Plus / Plus Query: 398 agaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaact 457 ||||| |||| ||||| ||||||| || || ||||||||||||||||||||||||||| Sbjct: 101 agaaggtggaatgccctcggtgcaagtctggcaacaccaagttctgctactacaacaact 160 Query: 458 acagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcg 517 | || | | | ||||| ||| ||| |||| ||||||||||||||||||| || || | Sbjct: 161 atagtatgtctcagccccgctacttctgcaaggcctgccgccgctactggacccatggtg 220 Query: 518 gcaccctgcgcaa 530 || |||| ||||| Sbjct: 221 gctccctccgcaa 233
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 462 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 18358336 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 18358281 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 460 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 13368604 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 13368553
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 65.9 bits (33), Expect = 1e-07 Identities = 77/89 (86%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca-gcacggcgcagccgcgccactactgccgc 489 |||||||||||||||||| |||||||||| || | ||||||||||||||| |||| Sbjct: 115663 acaccaagttctgctacttcaacaactactcgctct-cgcagccgcgccacttctgcaag 115721 Query: 490 acctgccgccgctactggacgcacggcgg 518 || ||||||||||||||||||| |||||| Sbjct: 115722 acgtgccgccgctactggacgcgcggcgg 115750
>dbj|AK109091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A04, full insert sequence Length = 1381 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 462 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 619 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 674
>dbj|AK070563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H13, full insert sequence Length = 1406 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 462 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 620 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 675
>gb|AY496057.2| Triticum aestivum Dof DNA-binding protein mRNA, complete cds Length = 1279 Score = 65.9 bits (33), Expect = 1e-07 Identities = 108/133 (81%) Strand = Plus / Plus Query: 398 agaagctggagtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaact 457 ||||| |||| ||||| ||||||| || || ||||||||||||||||||||||||||| Sbjct: 144 agaaggtggaatgccctcggtgcaagtctggcaacaccaagttctgctactacaacaact 203 Query: 458 acagcacggcgcagccgcgccactactgccgcacctgccgccgctactggacgcacggcg 517 | || | | | ||||| ||| ||| |||| ||||||||||||||||||| || || | Sbjct: 204 atagtatgtctcagccccgctacttctgcaaggcctgccgccgctactggacccatggtg 263 Query: 518 gcaccctgcgcaa 530 || |||| ||||| Sbjct: 264 gctccctccgcaa 276
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 53/57 (92%), Gaps = 2/57 (3%) Strand = Plus / Minus Query: 407 agtgcccgcggtgcagctccagcga-caccaagttctgctactacaacaactacagc 462 |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 18368389 agtgcccgcggtgcggctcg-gcgaacaccaagttctgctactacaacaactacagc 18368334 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 460 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 13375944 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 13375893
>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 69273 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||| |||||||||| | ||||||||||||||| |||| Sbjct: 13823 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 13882 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 13883 cttgccgccgctactggacgcgcggcggc 13911
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||| |||||||||| | ||||||||||||||| |||| Sbjct: 8885 acaccaagttctgctacttcaacaactactcgctgtcgcagccgcgccacttctgcaagg 8826 Query: 491 cctgccgccgctactggacgcacggcggc 519 | ||||||||||||||||||| ||||||| Sbjct: 8825 cttgccgccgctactggacgcgcggcggc 8797
>ref|NM_196421.1| Oryza sativa (japonica cultivar-group) putative H-protein promoter binding factor-2a (OSJNBa0060A14.11), mRNA Length = 1461 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 460 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 436 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 487
>ref|NM_190742.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 101 acaccaagttctgctactacaacaactacagc 132
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 3630 acaccaagttctgctactacaacaactacagc 3661
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 100631 acaccaagttctgctactacaacaactacagc 100662
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 460 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 60981 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 60930
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 63.9 bits (32), Expect = 5e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||||||||||||| Sbjct: 61064 acaccaagttctgctactacaacaactacagc 61033
>dbj|AK068588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152P10, full insert sequence Length = 1381 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 409 tgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactaca 460 ||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct: 450 tgcccgcggtgcagcagcatggacaccaagttctgctacttcaacaactaca 501
>ref|XM_469889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | | ||||||||||||| |||| | Sbjct: 233 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 292 Query: 491 cctgccgccgctactggac 509 | |||||||| |||||||| Sbjct: 293 cgtgccgccggtactggac 311
>ref|XM_470300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1809 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 539 gacaccaagttctgctactacaacaactaca 569
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | | ||||||||||||| |||| | Sbjct: 136180 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 136239 Query: 491 cctgccgccgctactggac 509 | |||||||| |||||||| Sbjct: 136240 cgtgccgccggtactggac 136258
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 59359 gacaccaagttctgctactacaacaactaca 59329
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 642 gacaccaagttctgctactacaacaactaca 672
>gb|AY224429.1| Oryza sativa (japonica cultivar-group) isolate 20575 putative H-protein promoter binding factor-2a mRNA, complete cds Length = 1323 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 343 gacaccaagttctgctactacaacaactaca 373
>emb|AJ312330.1|HVU312330 Hordeum vulgare partial dof166 gene for dof zinc finger protein, exon 1 Length = 1817 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 1057 gacaccaagttctgctactacaacaactaca 1087
>emb|AJ312326.1|HVU312326 Hordeum vulgare dof140 gene for dof zinc finger protein Length = 795 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||| |||||||||| | ||||||| ||||||| |||||| Sbjct: 257 acaccaagttctgctacttcaacaactactccctcacgcagccccgccacttttgccgcg 316 Query: 491 cctgccgccgctactggac 509 | ||||||||||||||||| Sbjct: 317 catgccgccgctactggac 335
>dbj|AK104523.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F03, full insert sequence Length = 1776 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 530 gacaccaagttctgctactacaacaactaca 560
>dbj|AK099490.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026L11, full insert sequence Length = 1800 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 531 gacaccaagttctgctactacaacaactaca 561
>dbj|AK066912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089G12, full insert sequence Length = 1496 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 996 gacaccaagttctgctactacaacaactaca 966
>dbj|AK063380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F11, full insert sequence Length = 1626 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgca 490 |||||||||||||||||||||||||||||| | | ||||||||||||| |||| | Sbjct: 415 acaccaagttctgctactacaacaactacaacctcacccagccgcgccacttctgcaaga 474 Query: 491 cctgccgccgctactggac 509 | |||||||| |||||||| Sbjct: 475 cgtgccgccggtactggac 493
>dbj|AK060900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D05, full insert sequence Length = 1776 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||||||||||||||| Sbjct: 530 gacaccaagttctgctactacaacaactaca 560
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||||||||||||||||||||||||||||| Sbjct: 10112372 acaccaagttctgctactacaacaactaca 10112401 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tgattgccgccgccgccgcc 77 |||||||||||||||||||| Sbjct: 15933810 tgattgccgccgccgccgcc 15933791 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cgctccttcccgccgccggcgcca 298 |||||||||||||||||| ||||| Sbjct: 8942224 cgctccttcccgccgccgccgcca 8942247 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cgctccttcccgccgccggcgcca 298 |||||||||||||||||| ||||| Sbjct: 8942056 cgctccttcccgccgccgccgcca 8942079
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 60.0 bits (30), Expect = 8e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||||||||||||||||||||||||||||| Sbjct: 78738 acaccaagttctgctactacaacaactaca 78767
>emb|AJ312328.1|HVU312328 Hordeum vulgare partial dof151 gene for dof zinc finger protein Length = 657 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgc 489 ||||||||||||||||||| ||||||||||| | |||||||| |||| |||||| Sbjct: 241 gacaccaagttctgctacttcaacaactacaacgtcaaccagccgcggcacttctgccga 300 Query: 490 acctgccgccgctactggacgcacggcggc 519 |||||| ||||||||||||| ||||||| Sbjct: 301 gcctgccaccgctactggacggccggcggc 330
>ref|XM_478332.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactac 459 ||||||||||||||||||||||||||||| Sbjct: 173 acaccaagttctgctactacaacaactac 201
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactac 459 ||||||||||||||||||||||||||||| Sbjct: 19309198 acaccaagttctgctactacaacaactac 19309226 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 29025055 aagttctgctactacaacaactaca 29025031 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactac 459 |||||||||||||||||| |||||||||| Sbjct: 7637539 acaccaagttctgctacttcaacaactac 7637511 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 gcgctgctccgcccgcacggc 250 ||||||||||||||||||||| Sbjct: 24096847 gcgctgctccgcccgcacggc 24096827 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 cgctccttcccgccgccggcgcca 298 |||||||||||||||||| ||||| Sbjct: 15367370 cgctccttcccgccgccgccgcca 15367347
>emb|AJ312329.1|HVU312329 Hordeum vulgare partial dof171 gene for dof zinc finger protein Length = 535 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 407 agtgcccgcggtgcagctccagcgacaccaagttctgctactacaacaactac 459 |||||||||| ||| ||||| | |||||||||||||||||| |||||||||| Sbjct: 114 agtgcccgcgctgcgactccaccaacaccaagttctgctacttcaacaactac 166
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactac 459 ||||||||||||||||||||||||||||| Sbjct: 85424 acaccaagttctgctactacaacaactac 85452
>ref|NM_105137.2| Arabidopsis thaliana DNA binding / transcription factor AT1G64620 mRNA, complete cds Length = 1589 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||||||||| |||||||||||||||||| Sbjct: 469 acaccaagttctgttactacaacaactacagc 500
>ref|NM_129315.2| Arabidopsis thaliana DNA binding / transcription factor AT2G37590 mRNA, complete cds Length = 1263 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||| ||||||||||||| Sbjct: 441 acaccaagttctgctacttcaacaactacagc 472
>ref|NM_102596.3| Arabidopsis thaliana DNA binding / transcription factor AT1G28310 transcript variant AT1G28310.1 mRNA, complete cds Length = 1635 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||| ||||||||||||||||||||||||||| Sbjct: 475 acacaaagttctgctactacaacaactacagc 506
>ref|NM_001036023.1| Arabidopsis thaliana DNA binding AT1G28310 transcript variant AT1G28310.2 mRNA, complete cds Length = 1627 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||| ||||||||||||||||||||||||||| Sbjct: 162 acacaaagttctgctactacaacaactacagc 193
>ref|NM_119961.2| Arabidopsis thaliana DNA binding / transcription factor AT4G38000 mRNA, complete cds Length = 963 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||| |||||||||||||||||||||||| Sbjct: 225 acaccaaattctgctactacaacaactacagc 256
>gb|AF224765.1| Andira aubletii clone BwH11-I microsatellite sequence Length = 474 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||||||| ||||||||| Sbjct: 72 acaccaagttctgctactacaataactacagc 41
>gb|AC021044.5| Arabidopsis thaliana chromosome I BAC F3H9 genomic sequence, complete sequence Length = 121720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||| ||||||||||||||||||||||||||| Sbjct: 31705 acacaaagttctgctactacaacaactacagc 31736
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||| |||||||||||||||||||||||| Sbjct: 161017 acaccaaattctgctactacaacaactacagc 161048
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||| |||||||||||||||||||||||| Sbjct: 46602 acaccaaattctgctactacaacaactacagc 46633
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||| ||||||||||||| Sbjct: 25863 acaccaagttctgctacttcaacaactacagc 25894
>gb|BT006092.1| Arabidopsis thaliana clone U20996 putative Dof zinc finger protein (At4g38000) mRNA, complete cds Length = 772 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||| |||||||||||||||||||||||| Sbjct: 149 acaccaaattctgctactacaacaactacagc 180
>emb|BX816643.1|CNS0AD27 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||| ||||||||||||||||||||||||||| Sbjct: 477 acacaaagttctgctactacaacaactacagc 508
>emb|BX815139.1|CNS0ABDR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||||||||| |||||||||||||||||| Sbjct: 255 acaccaagttctgttactacaacaactacagc 286
>emb|BX820837.1|CNS0A8PT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||||||||||| ||||||||||||| Sbjct: 442 acaccaagttctgctacttcaacaactacagc 473
>gb|BT005767.1| Arabidopsis thaliana clone RAFL15-43-I22 (R20996) putative Dof zinc finger protein (At4g38000) mRNA, complete cds Length = 1006 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||| |||||||||||||||||||||||| Sbjct: 225 acaccaaattctgctactacaacaactacagc 256
>gb|BT005148.1| Arabidopsis thaliana clone U20433 putative Dof zinc finger protein (At1g64620) mRNA, complete cds Length = 1090 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||||||||| |||||||||||||||||| Sbjct: 173 acaccaagttctgttactacaacaactacagc 204
>gb|AC009519.4|AC009519 Genomic sequence for Arabidopsis thaliana BAC F1N19 from chromosome I, complete sequence Length = 113172 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||||||||| |||||||||||||||||| Sbjct: 75862 acaccaagttctgttactacaacaactacagc 75893
>gb|BT004047.1| Arabidopsis thaliana clone RAFL14-91-B14 (R20433) putative Dof zinc finger protein (At1g64620) mRNA, complete cds Length = 1611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||||||||| |||||||||||||||||| Sbjct: 475 acaccaagttctgttactacaacaactacagc 506
>gb|AY084898.1| Arabidopsis thaliana clone 120488 mRNA, complete sequence Length = 1359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 ||||||||||||| |||||||||||||||||| Sbjct: 237 acaccaagttctgttactacaacaactacagc 268
>gb|AY299272.1| Arabidopsis thaliana clone D2 mRNA sequence Length = 1642 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||| ||||||||||||||||||||||||||| Sbjct: 162 acacaaagttctgctactacaacaactacagc 193
>ref|NM_114430.2| Arabidopsis thaliana DNA binding / transcription factor AT3G45610 mRNA, complete cds Length = 1072 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||||||||||||||||||||| Sbjct: 239 acacaaagttctgctactacaacaactacag 269
>ref|XM_483086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 |||||||| |||||||||||||||||||||| Sbjct: 208 gacaccaaattctgctactacaacaactaca 238
>ref|NM_191305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 618 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||| ||||||||||| Sbjct: 334 gacaccaagttctgctacttcaacaactaca 364
>gb|AY389591.1| Hyacinthus orientalis H-protein promoter binding factor (DOF) mRNA, partial cds Length = 505 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaactacagcacggcgcagccgcgccactactgccgcacc 492 |||||||||||||||| ||||||||||| | |||||||| |||| |||| | | | Sbjct: 56 accaagttctgctacttcaacaactacaacgtcaaccagccgcgtcacttctgcaggaac 115 Query: 493 tgccgccgctactggacgcacggcggcaccctgcg 527 |||| |||||||||||| ||||||||||||||| Sbjct: 116 tgccaccgctactggaccgccggcggcaccctgcg 150
>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21 Length = 110980 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||||||||||||||||||||| Sbjct: 82611 acacaaagttctgctactacaacaactacag 82581
>gb|AY062783.1| Arabidopsis thaliana dof6 zinc finger protein (F9K21.19) mRNA, complete cds Length = 972 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||||||||||||||||||||| Sbjct: 239 acacaaagttctgctactacaacaactacag 269
>gb|AC169375.4| Sorghum bicolor clone SB_BBc0020O07, complete sequence Length = 117931 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactaca 460 |||||||||||||||||||| |||||||||| Sbjct: 100213 gacaccaagttctgctactataacaactaca 100183
>gb|BT006284.1| Arabidopsis thaliana At3g45610 mRNA, complete cds Length = 738 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||||||||||||||||||||| Sbjct: 146 acacaaagttctgctactacaacaactacag 176
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 |||||||| |||||||||||||||||||||| Sbjct: 24225799 gacaccaaattctgctactacaacaactaca 24225829
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||| ||||||||||| Sbjct: 30494 gacaccaagttctgctacttcaacaactaca 30464
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 |||||||| |||||||||||||||||||||| Sbjct: 92138 gacaccaaattctgctactacaacaactaca 92168
>emb|AJ243033.1|ATH243033 Arabidopsis thaliana mRNA for dof zinc finger protein (dof6 gene) Length = 1024 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||||||||||||||||||||| Sbjct: 236 acacaaagttctgctactacaacaactacag 266
>dbj|AK071083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076F14, full insert sequence Length = 1078 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||| ||||||||||| Sbjct: 461 gacaccaagttctgctacttcaacaactaca 491
>dbj|AB028133.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds Length = 1174 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 ||||||||||||||||||| ||||||||||| Sbjct: 539 gacaccaagttctgctacttcaacaactaca 569
>ref|NM_126093.1| Arabidopsis thaliana DNA binding / transcription factor AT5G66940 mRNA, complete cds Length = 678 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 ||||||||||||| |||||||||||||||| Sbjct: 122 acaccaagttctgttactacaacaactaca 151
>dbj|AB026640.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K8A10 Length = 31132 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactaca 460 ||||||||||||| |||||||||||||||| Sbjct: 1173 acaccaagttctgttactacaacaactaca 1144
>dbj|AB087851.1| Pisum sativum PsDof6 mRNA for DNA binding with one finger 6 protein, complete cds Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||| ||||||||||||||||||||||||| Sbjct: 152 acacaaagttctgctactacaacaactaca 181
>dbj|AB087850.1| Pisum sativum PsDof5 mRNA for DNA binding with one finger 5 protein, complete cds Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||||||||| ||||||||||||||||||| Sbjct: 252 acaccaagttttgctactacaacaactaca 281
>ref|XM_479581.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1803 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 416 aagttctgctactacaacaactaca 440
>ref|XM_506580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0060O17.31 mRNA Length = 1849 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 425 aagttctgctactacaacaactaca 449
>ref|XM_477205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1534 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactac 459 |||||||||||||||||| |||||||||| Sbjct: 258 acaccaagttctgctacttcaacaactac 286
>gb|AY224430.1| Oryza sativa (japonica cultivar-group) isolate 20587 AOBP-like protein mRNA, complete cds Length = 1431 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 355 aagttctgctactacaacaactaca 379
>gb|AY088946.1| Arabidopsis thaliana clone 103581 mRNA, complete sequence Length = 936 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 432 caccaagttctgctactacaacaactaca 460 |||||||||||| |||||||||||||||| Sbjct: 180 caccaagttctgttactacaacaactaca 208
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 142592 aagttctgctactacaacaactaca 142568
>dbj|AK119625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H10, full insert sequence Length = 1767 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 424 aagttctgctactacaacaactaca 448
>dbj|AK104095.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E07, full insert sequence Length = 1803 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 416 aagttctgctactacaacaactaca 440
>dbj|AK068542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H18, full insert sequence Length = 1534 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactac 459 |||||||||||||||||| |||||||||| Sbjct: 258 acaccaagttctgctacttcaacaactac 286
>dbj|AK065816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041J16, full insert sequence Length = 1847 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||||||||||||||| Sbjct: 424 aagttctgctactacaacaactaca 448
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0407H12 Length = 167754 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactac 459 |||||||||||||||||| |||||||||| Sbjct: 142949 acaccaagttctgctacttcaacaactac 142921
>ref|NM_180607.1| Arabidopsis thaliana OBP2; DNA binding / transcription factor AT1G07640 (OBP2) transcript variant AT1G07640.1 mRNA, complete cds Length = 1418 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 318 ctccagcaacactaagttctgttactacaacaacta 353
>ref|NM_100637.3| Arabidopsis thaliana OBP2; DNA binding / transcription factor AT1G07640 (OBP2) transcript variant AT1G07640.2 mRNA, complete cds Length = 1538 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 438 ctccagcaacactaagttctgttactacaacaacta 473
>ref|NM_001035911.1| Arabidopsis thaliana OBP2; DNA binding AT1G07640 (OBP2) transcript variant AT1G07640.3 mRNA, complete cds Length = 1588 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 488 ctccagcaacactaagttctgttactacaacaacta 523
>gb|AC146855.5| Medicago truncatula clone mth2-16c23, complete sequence Length = 137979 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaacta 458 |||||||||||||||| ||||||||||| Sbjct: 118456 acaccaagttctgctattacaacaacta 118429
>gb|AY093351.1| Arabidopsis thaliana strong similarity to zinc finger protein OBP2 (At1g07640) mRNA, complete cds Length = 922 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 81 ctccagcaacactaagttctgttactacaacaacta 116
>gb|AY062715.1| Arabidopsis thaliana Strong similarity to zinc finger protein OBP2 (At1g07640; F24B9.30) mRNA, complete cds Length = 1399 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 299 ctccagcaacactaagttctgttactacaacaacta 334
>emb|BX815039.1|CNS0ACXL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1403 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 399 ctccagcaacactaagttctgttactacaacaacta 434
>gb|AY088198.1| Arabidopsis thaliana clone 4289 mRNA, complete sequence Length = 1538 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 438 ctccagcaacactaagttctgttactacaacaacta 473
>gb|AC007583.2|F24B9 Arabidopsis thaliana chromosome 1 BAC F24B9 sequence, complete sequence Length = 107234 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 89778 ctccagcaacactaagttctgttactacaacaacta 89813
>gb|AF155816.1|AF155816 Arabidopsis thaliana zinc finger protein OBP2 mRNA, complete cds Length = 1408 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 423 ctccagcgacaccaagttctgctactacaacaacta 458 ||||||| |||| |||||||| |||||||||||||| Sbjct: 311 ctccagcaacactaagttctgttactacaacaacta 346
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||| |||||||| |||||||||||||||||| Sbjct: 30671 acacaaagttctgttactacaacaactacagc 30702
>ref|NM_103658.2| Arabidopsis thaliana DNA binding / transcription factor AT1G47655 mRNA, complete cds Length = 942 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 432 caccaagttctgctactacaacaacta 458 |||||||||||| |||||||||||||| Sbjct: 186 caccaagttctgttactacaacaacta 212
>ref|NM_102442.1| Arabidopsis thaliana DNA binding / transcription factor AT1G26790 mRNA, complete cds Length = 1191 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 430 gacaccaagttctgctactacaacaactaca 460 |||||||| ||||| |||||||||||||||| Sbjct: 430 gacaccaaattctgttactacaacaactaca 460
>ref|NM_125957.2| Arabidopsis thaliana DNA binding / transcription factor AT5G65590 mRNA, complete cds Length = 1391 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||| ||||||||||||||||| Sbjct: 251 acacaaagttctgttactacaacaactacag 281
>gb|BT015717.1| Arabidopsis thaliana At4g35930 gene, complete cds Length = 951 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||| ||||||||||||||||| Sbjct: 149 acacaaagttctgttactacaacaactacag 179
>gb|BT014981.1| Arabidopsis thaliana At5g65590 gene, complete cds Length = 1333 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||| ||||||||||||||||| Sbjct: 228 acacaaagttctgttactacaacaactacag 258
>gb|AY391272.1| Aeromonas hydrophila clone PA50 ORF34-like protein and putative tail fiber-like protein genes, complete cds Length = 3771 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 478 cactactgccgcacctgccgccgctac 504 |||||| |||||||||||||||||||| Sbjct: 592 cactacggccgcacctgccgccgctac 618
>emb|BX830682.1|CNS0A0NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1394 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||| ||||||||||||||||| Sbjct: 251 acacaaagttctgttactacaacaactacag 281
>gb|AC006535.7|AC006535 Genomic sequence for Arabidopsis thaliana BAC T24P13 from chromosome I, complete sequence Length = 98630 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 430 gacaccaagttctgctactacaacaactaca 460 |||||||| ||||| |||||||||||||||| Sbjct: 74376 gacaccaaattctgttactacaacaactaca 74346
>dbj|AB026639.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21L13 Length = 63921 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 431 acaccaagttctgctactacaacaactacag 461 |||| |||||||| ||||||||||||||||| Sbjct: 29189 acacaaagttctgttactacaacaactacag 29159
>dbj|AB087849.1| Pisum sativum PsDof4 mRNA for DNA binding with one finger 4 protein, complete cds Length = 1388 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacag 461 ||||||| ||||| ||||||||||||||||| Sbjct: 267 acaccaaattctgttactacaacaactacag 297
>gb|AC007519.2|F16N3 Sequence of BAC F16N3 from Arabidopsis thaliana chromosome 1, complete sequence Length = 171769 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 432 caccaagttctgctactacaacaacta 458 |||||||||||| |||||||||||||| Sbjct: 40700 caccaagttctgttactacaacaacta 40674
>ref|NM_114901.2| Arabidopsis thaliana OBP1; DNA binding / transcription factor AT3G50410 (OBP1) mRNA, complete cds Length = 996 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||| |||||||| |||||||||||||||| Sbjct: 240 acactaagttctgttactacaacaactaca 269
>ref|NM_123328.2| Arabidopsis thaliana DNA binding / transcription factor AT5G39660 transcript variant AT5G39660.2 mRNA, complete cds Length = 1692 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 636 accaagttctgttactacaacaacta 661
>ref|NM_180775.2| Arabidopsis thaliana DNA binding / transcription factor AT5G39660 transcript variant AT5G39660.1 mRNA, complete cds Length = 1906 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 663 accaagttctgttactacaacaacta 688
>gb|BT015791.1| Arabidopsis thaliana At5g39660 mRNA, complete cds Length = 1374 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 442 accaagttctgttactacaacaacta 467
>gb|AY225586.1| Brassica rapa subsp. oleifera HRa (HRa), HRb (HRb), and HRc (HRc) genes, complete cds Length = 18869 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||| |||||||| |||||||||||||||| Sbjct: 758 acactaagttctgttactacaacaactaca 787
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 ctgattgccgccgccgccgccc 78 |||||||||||||||||||||| Sbjct: 199044 ctgattgccgccgccgccgccc 199065
>gb|AC136450.7| Medicago truncatula clone mth2-34d6, complete sequence Length = 86095 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 ttctgctactacaacaactaca 460 |||||||||||||||||||||| Sbjct: 33164 ttctgctactacaacaactaca 33143
>emb|AL132976.2|ATF11C1 Arabidopsis thaliana DNA chromosome 3, BAC clone F11C1 Length = 111122 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||| |||||||| |||||||||||||||| Sbjct: 110366 acactaagttctgttactacaacaactaca 110395
>gb|AY072012.1| Arabidopsis thaliana AT5g39660/MIJ24_130 mRNA sequence Length = 1421 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 597 accaagttctgttactacaacaacta 622
>gb|AY056804.1| Arabidopsis thaliana AT5g39660/MIJ24_130 mRNA, complete cds Length = 1803 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 636 accaagttctgttactacaacaacta 661
>emb|BX830102.1|CNS0A03T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1750 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 605 accaagttctgttactacaacaacta 630
>emb|BX830939.1|CNS09ZHX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZB11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1803 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 661 accaagttctgttactacaacaacta 686
>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence Length = 171209 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ctcactctcttcttcctctcct 125 |||||||||||||||||||||| Sbjct: 89846 ctcactctcttcttcctctcct 89825
>dbj|AB012243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIJ24 Length = 68697 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 51955 accaagttctgttactacaacaacta 51980
>emb|AJ242853.1|STU242853 Solanum tuberosum mRNA for Dof zinc finger protein (dof1 gene) Length = 1243 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||| ||||||||||||| ||||||||||| Sbjct: 302 acacaaagttctgctacttcaacaactaca 331
>emb|X89192.1|ATDNABPRO A.thaliana mRNA for DNA binding protein Length = 923 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactaca 460 |||| |||||||| |||||||||||||||| Sbjct: 150 acactaagttctgttactacaacaactaca 179
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 104 ctcactctcttcttcctctcct 125 |||||||||||||||||||||| Sbjct: 1722490 ctcactctcttcttcctctcct 1722469
>gb|AC172878.1| Brassica rapa subsp. pekinensis clone KBrH069E01, complete sequence Length = 53923 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 433 accaagttctgctactacaacaacta 458 ||||||||||| |||||||||||||| Sbjct: 38409 accaagttctgttactacaacaacta 38384
>ref|NM_116321.3| Arabidopsis thaliana DNA binding AT4G00940 mRNA, complete cds Length = 915 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 418 tgcagctccagcgacaccaagttctgctactacaacaactacagc 462 |||| ||| ||| |||||||||| || || ||||||||||||||| Sbjct: 247 tgcaactcaagcaacaccaagttttgttattacaacaactacagc 291
>ref|NM_125637.2| Arabidopsis thaliana CDF1 (CYCLING DOF FACTOR 1); DNA binding / transcription factor AT5G62430 (CDF1) mRNA, complete cds Length = 1083 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 |||||||| |||||||||||||||| Sbjct: 176 aagttctgttactacaacaactaca 200
>ref|NM_188100.1| Oryza sativa (japonica cultivar-group), Ozsa8532 predicted mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||| ||||||||||| Sbjct: 265 aagttctgctacttcaacaactaca 289
>ref|NM_184882.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ctgattgccgccgccgccgcc 77 ||||||||||||||||||||| Sbjct: 200 ctgattgccgccgccgccgcc 180
>ref|XM_478978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2264 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 gcgctgctccgcccgcacggc 250 ||||||||||||||||||||| Sbjct: 1555 gcgctgctccgcccgcacggc 1575
>gb|BT018854.1| Zea mays clone EL01N0556B07.d mRNA sequence Length = 1562 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 gcgctgctccgcccgcacggc 250 ||||||||||||||||||||| Sbjct: 845 gcgctgctccgcccgcacggc 865
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gccgccgccgccgcccatcca 83 ||||||||||||||||||||| Sbjct: 436683 gccgccgccgccgcccatcca 436703
>ref|XM_422497.1| PREDICTED: Gallus gallus similar to barttin (LOC424663), mRNA Length = 1276 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gctgctgaagaagggcagccc 351 ||||||||||||||||||||| Sbjct: 540 gctgctgaagaagggcagccc 560
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 ttgccgccgccgccgcccatccagc 85 |||||||||||| |||||||||||| Sbjct: 132846 ttgccgccgccgtcgcccatccagc 132870
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 482 actgccgcacctgccgccgct 502 ||||||||||||||||||||| Sbjct: 511533 actgccgcacctgccgccgct 511513
>ref|XM_193558.6| PREDICTED: Mus musculus IBR domain containing 1 (Ibrdc1), mRNA Length = 2834 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgccgccgccgcccatccagc 85 ||||||||||||||||||||| Sbjct: 497 cgccgccgccgcccatccagc 477
>ref|XM_532338.2| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 2C, 2 (LOC475107), mRNA Length = 3587 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gccgccgccgccgcccatcca 83 ||||||||||||||||||||| Sbjct: 156 gccgccgccgccgcccatcca 176
>ref|XM_566506.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA01620) partial mRNA Length = 3960 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcca 83 ||||||||||||||||||||| Sbjct: 1547 gccgccgccgccgcccatcca 1527
>gb|AC116557.30| Mus musculus strain C57BL/6J clone rp23-239f10 map 8, complete sequence Length = 232571 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 cgccgccgccgcccatccagc 85 ||||||||||||||||||||| Sbjct: 158091 cgccgccgccgcccatccagc 158111
>gb|AC126430.3| Mus musculus BAC clone RP24-406F17 from chromosome 10, complete sequence Length = 154482 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 cgccgccgccgcccatccagc 85 ||||||||||||||||||||| Sbjct: 126926 cgccgccgccgcccatccagc 126906
>gb|AY143830.1| Arabidopsis thaliana At5g62430/K19B1_4 mRNA, complete cds Length = 714 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 |||||||| |||||||||||||||| Sbjct: 10 aagttctgttactacaacaactaca 34
>emb|BX908810.1| Neurospora crassa DNA linkage group IV Cosmid contig G3C5 Length = 70104 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 gccgccgccgccgcccatcca 83 ||||||||||||||||||||| Sbjct: 6303 gccgccgccgccgcccatcca 6323
>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3 Length = 196149 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Minus Query: 418 tgcagctccagcgacaccaagttctgctactacaacaactacagc 462 |||| ||| ||| |||||||||| || || ||||||||||||||| Sbjct: 17701 tgcaactcaagcaacaccaagttttgttattacaacaactacagc 17657
>gb|AF446362.1|AF446362 Arabidopsis thaliana AT5g62430/K19B1_4 mRNA, complete cds Length = 1086 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 |||||||| |||||||||||||||| Sbjct: 176 aagttctgttactacaacaactaca 200
>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete sequence Length = 140044 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 ctgattgccgccgccgccgcc 77 ||||||||||||||||||||| Sbjct: 70397 ctgattgccgccgccgccgcc 70417
>dbj|AB231333.1| Arabidopsis thaliana CDF1 mRNA for cyclic dof factor 1, complete cds Length = 923 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 |||||||| |||||||||||||||| Sbjct: 193 aagttctgttactacaacaactaca 217
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||| ||||||||||| Sbjct: 173524 aagttctgctacttcaacaactaca 173548
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 gcgctgctccgcccgcacggc 250 ||||||||||||||||||||| Sbjct: 30262 gcgctgctccgcccgcacggc 30242
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1399_D07, complete sequence Length = 65000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 ttgccgccgccgccgcccatccagc 85 |||||||||||| |||||||||||| Sbjct: 59253 ttgccgccgccgtcgcccatccagc 59277
>emb|BX119959.7| Mouse DNA sequence from clone RP23-346N16 on chromosome X, complete sequence Length = 193860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 tcactctcttcttcctctcct 125 ||||||||||||||||||||| Sbjct: 116694 tcactctcttcttcctctcct 116714
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 436 aagttctgctactacaacaactaca 460 |||||||| |||||||||||||||| Sbjct: 9716 aagttctgttactacaacaactaca 9692
>ref|XM_309399.2| Anopheles gambiae str. PEST ENSANGP00000015036 (ENSANGG00000012547), mRNA Length = 833 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tgccgccgccgccgcccatcc 82 ||||||||||||||||||||| Sbjct: 796 tgccgccgccgccgcccatcc 776
>ref|XM_309398.2| Anopheles gambiae str. PEST ENSANGP00000023378 (ENSANGG00000012547), mRNA Length = 944 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 tgccgccgccgccgcccatcc 82 ||||||||||||||||||||| Sbjct: 664 tgccgccgccgccgcccatcc 644
>dbj|AK101193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030I03, full insert sequence Length = 2264 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 gcgctgctccgcccgcacggc 250 ||||||||||||||||||||| Sbjct: 1555 gcgctgctccgcccgcacggc 1575
>dbj|AK066984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091E10, full insert sequence Length = 2257 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 aagttctgctactacaacaactaca 460 ||||||||||||| ||||||||||| Sbjct: 576 aagttctgctacttcaacaactaca 600
>gb|AY111543.1| Zea mays CL1878_1 mRNA sequence Length = 1200 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaa 455 |||||||||| |||||||||||||| Sbjct: 251 acaccaagttttgctactacaacaa 275
>gb|U82230.1|ZMU82230 Zea mays endosperm-specific prolamin box binding factor (PBF) mRNA, complete cds Length = 1218 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaa 455 |||||||||| |||||||||||||| Sbjct: 251 acaccaagttttgctactacaacaa 275
>gb|AF013294.1|TM018A10 Arabidopsis thaliana BAC TM018A10 Length = 106184 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 418 tgcagctccagcgacaccaagttctgctactacaacaactacagc 462 |||| ||| ||| |||||||||| || || ||||||||||||||| Sbjct: 23889 tgcaactcaagcaacaccaagttttgttattacaacaactacagc 23933
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ccgccgccggcgccaagcgc 303 |||||||||||||||||||| Sbjct: 3936749 ccgccgccggcgccaagcgc 3936768
>ref|NM_115104.1| Arabidopsis thaliana DNA binding / transcription factor AT3G52440 mRNA, complete cds Length = 744 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaacta 458 |||| |||||||| |||||||||||||| Sbjct: 101 acacaaagttctgttactacaacaacta 128
>ref|NM_179795.1| Arabidopsis thaliana DNA binding / transcription factor AT2G28810 mRNA, complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaactaca 460 ||||||||||| |||| ||||||||||| Sbjct: 361 accaagttctgttacttcaacaactaca 388
>ref|NM_114618.2| Arabidopsis thaliana DNA binding / transcription factor AT3G47500 mRNA, complete cds Length = 1716 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 433 accaagttctgctactacaacaactaca 460 ||||||||||| || ||||||||||||| Sbjct: 451 accaagttctgttattacaacaactaca 478
>ref|NM_106562.1| Arabidopsis thaliana unknown protein AT1G79110 transcript variant AT1G79110.1 mRNA, complete cds Length = 1210 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ctgctactacaacaactaca 460 |||||||||||||||||||| Sbjct: 405 ctgctactacaacaactaca 424
>ref|NM_202445.1| Arabidopsis thaliana unknown protein AT1G79110 transcript variant AT1G79110.2 mRNA, complete cds Length = 1345 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ctgctactacaacaactaca 460 |||||||||||||||||||| Sbjct: 536 ctgctactacaacaactaca 555
>ref|NM_001036485.1| Arabidopsis thaliana unknown protein AT4G00026 mRNA, complete cds Length = 810 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 gcagctccagcgacaccaag 438 |||||||||||||||||||| Sbjct: 440 gcagctccagcgacaccaag 421
>ref|NM_101986.1| Arabidopsis thaliana DNA binding / transcription factor AT1G21340 mRNA, complete cds Length = 783 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 431 acaccaagttctgctactacaacaactacagc 462 |||||||||| || || ||||||||||||||| Sbjct: 140 acaccaagttttgttattacaacaactacagc 171
>gb|AY423014.1| Danio rerio SRY-box 7 (SOX7) mRNA, complete cds Length = 2246 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ctactacaacaactacagca 463 |||||||||||||||||||| Sbjct: 1327 ctactacaacaactacagca 1346
>ref|XM_630095.1| Dictyostelium discoideum hypothetical protein (DDB0183869), partial mRNA Length = 1827 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tctcactctcttcttcctct 122 |||||||||||||||||||| Sbjct: 1555 tctcactctcttcttcctct 1536
>ref|XM_475710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 119 tgccgccgccgccgcccatc 138
>ref|XM_465947.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1813 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 33 gccgccgccgccgcccatcc 52
>ref|NM_190871.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 297 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 248 gccgccgccgccgcccatcc 229
>ref|NM_187094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 417 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cgctccttcccgccgccggcgcca 298 |||||||||||||||||| ||||| Sbjct: 106 cgctccttcccgccgccgccgcca 129
>ref|XM_469671.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1285 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 366 gccgccgccgccgcccatcc 347
>gb|AE017130.1| Yersinia pestis biovar Medievalis str. 91001 section 4 of 16 of the complete genome Length = 290510 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 actgccgcacctgccgccgc 501 |||||||||||||||||||| Sbjct: 165660 actgccgcacctgccgccgc 165641
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttgccgccgccgccgcccat 80 |||||||||||||||||||| Sbjct: 52526 ttgccgccgccgccgcccat 52507
>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence Length = 227968 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tgccgccgccgccgcccatc 81 |||||||||||||||||||| Sbjct: 212788 tgccgccgccgccgcccatc 212807
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gccgccgccgcccatccagctcag 89 |||||||||||||||| ||||||| Sbjct: 2329413 gccgccgccgcccatcgagctcag 2329436
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccgccgccgccgcccatcc 82 |||||||||||||||||||| Sbjct: 2455 gccgccgccgccgcccatcc 2436
>gb|AC008285.7| Drosophila melanogaster clone BACR31P16, complete sequence Length = 177084 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tgattgccgccgccgccgcc 77 |||||||||||||||||||| Sbjct: 65163 tgattgccgccgccgccgcc 65144
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17, complete sequence Length = 174949 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 cgctccttcccgccgccggcgcca 298 |||||||||||||||||| ||||| Sbjct: 124590 cgctccttcccgccgccgccgcca 124613
>gb|BC075872.1| Danio rerio SRY (sex determining region Y)-box 7, mRNA (cDNA clone MGC:92054 IMAGE:7045912), complete cds Length = 2172 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ctactacaacaactacagca 463 |||||||||||||||||||| Sbjct: 1511 ctactacaacaactacagca 1530 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,838,876 Number of Sequences: 3902068 Number of extensions: 4838876 Number of successful extensions: 290087 Number of sequences better than 10.0: 346 Number of HSP's better than 10.0 without gapping: 378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 263830 Number of HSP's gapped (non-prelim): 26201 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
