ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16e10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 404 bits (204), Expect = e-109 Identities = 381/440 (86%) Strand = Plus / Plus Query: 111 cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 170 ||||||| ||||||||||||| |||||| ||| ||| ||||||| ||||| ||||| Sbjct: 88573 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 88632 Query: 171 gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 230 |||||| ||||| |||| || ||| ||||||||| ||||| | |||||| |||| || Sbjct: 88633 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 88692 Query: 231 ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 290 |||||||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 88693 ggtggactgcgaggccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 88752 Query: 291 gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccgtcccc 350 || |||||||||||| |||| || |||||||||||||||| |||| |||||| || Sbjct: 88753 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 88812 Query: 351 ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 410 || || || ||||||||||| ||||||||||||||||||| ||||||| ||||||||| Sbjct: 88813 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 88872 Query: 411 cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggg 470 | |||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 88873 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcccggccccggg 88932 Query: 471 gccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacgg 530 |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || Sbjct: 88933 gccgctcgccaccgcgccggcgttcctgttcacatgcggcgccacgttcctgaccgaagg 88992 Query: 531 cctcgccgccggcgccaccg 550 |||||||||||||||||||| Sbjct: 88993 cctcgccgccggcgccaccg 89012 Score = 280 bits (141), Expect = 5e-72 Identities = 369/445 (82%) Strand = Plus / Plus Query: 106 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 165 ||||| |||||||||||||||||||| |||||| ||| ||| ||||||| ||||| Sbjct: 91061 ccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtg 91120 Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 225 ||||||||||| ||||| ||||| || |||| ||||||||| ||||| | |||||| || Sbjct: 91121 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacg 91180 Query: 226 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcg 285 ||||||||||||||||| ||||||||||||| |||||||||||| | || ||||||| | Sbjct: 91181 ctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcggg 91240 Query: 286 tccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccg 345 ||||||| |||||||||| | |||| | | |||| || ||||||| ||||| ||| Sbjct: 91241 tccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgcca 91300 Query: 346 tccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtc 405 ||||||| || || |||| |||||| |||||||||||||| ||||| |||||||||||| Sbjct: 91301 tccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtc 91360 Query: 406 agcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcg 465 | | ||||| ||| |||||||||||||||| ||| ||||||||||||||||| | ||| Sbjct: 91361 acggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgcaccgcg 91420 Query: 466 ccggggccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgacc 525 ||||||||| ||||||||| ||||| ||| ||||||| || || ||||||| ||||| Sbjct: 91421 ccggggccgttcgccaccgtgccggagttcttgttcacctgtggccacacgttcttgacc 91480 Query: 526 gacggcctcgccgccggcgccaccg 550 || |||||||| ||||||||||| Sbjct: 91481 gagggcctcgctaacggcgccaccg 91505 Score = 240 bits (121), Expect = 4e-60 Identities = 358/437 (81%) Strand = Plus / Plus Query: 105 cccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacggg 164 ||||||||||||| ||||||||||| |||||| |||||||| ||||||| ||||| Sbjct: 95445 cccgagcgccgtgctgctgccggtggacaaggacggcgcaacgcagcagtacgtgacgat 95504 Query: 165 cttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctc 224 ||| ||||||| ||||| || || |||| ||||||| | ||||| | |||||| Sbjct: 95505 gttctggcagcggacgccgagtgtgcccgtgaaggccgtggttgacctcgcgggcgccat 95564 Query: 225 gctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgc 284 |||||||||||||||||| ||||||||| ||| ||||| || ||| |||||||||||| Sbjct: 95565 gctctgggtggactgcgagtccgggtacgagtcgtcgtcgtatgcgcgcgtgccgtgcgg 95624 Query: 285 gtccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagcc 344 |||||||| ||||||||||||||||| | ||||| |||||| ||||| ||| | | Sbjct: 95625 gtccaagccttgccgcctcgcgaagagcgccgcctgtgccaccggctgctccggtgcggc 95684 Query: 345 gtccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgt 404 ||||||||| || || ||||||||||| | ||||||||||||| |||| |||||||||| Sbjct: 95685 gtccccgggctgcctcaacgacacctgcaccgggttcccggagtacactatcacgcgcgt 95744 Query: 405 cagcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggc 464 |||||||||||| ||| ||||||| ||| ||||||| || |||||||| |||||| Sbjct: 95745 cagcaccggcggcaacatcatcacagacaagctgtcgctgtacaccacctgccgccccat 95804 Query: 465 gccggggccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgac 524 ||||| |||| |||||||||||||| |||||||||||| ||||| || |||| |||||| Sbjct: 95805 gccggttccgcgcgccaccgcgccggggtttctgttcacctgcggtgcaacgtccctgac 95864 Query: 525 cgacggcctcgccgccg 541 | | ||||||| ||||| Sbjct: 95865 caaaggcctcggcgccg 95881 Score = 210 bits (106), Expect = 4e-51 Identities = 169/190 (88%) Strand = Plus / Plus Query: 361 aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 420 ||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| ||| Sbjct: 102703 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 102762 Query: 421 ctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggggccgctcgcc 480 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 102763 atcatcaccgacgtgctgtcgctgcccaccaccttccgccccgcgccggggccgctcgcc 102822 Query: 481 accgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacggcctcgccgcc 540 |||||||||||||| ||||||| ||||| ||||||| ||||| | || ||||||| | Sbjct: 102823 accgcgccggcgttcttgttcacctgcggccacacgttcttgacccaaggactcgccgac 102882 Query: 541 ggcgccaccg 550 |||||||||| Sbjct: 102883 ggcgccaccg 102892 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 106 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 165 |||||| ||||||||||||||||||| |||||| ||| ||| ||||||| ||||| Sbjct: 102448 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 102507 Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 225 ||||||||||| ||||| ||||| || |||| ||||||||| ||||| | ||| || | Sbjct: 102508 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 102567 Query: 226 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 283 |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 102568 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 102625
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 404 bits (204), Expect = e-109 Identities = 381/440 (86%) Strand = Plus / Plus Query: 111 cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 170 ||||||| ||||||||||||| |||||| ||| ||| ||||||| ||||| ||||| Sbjct: 19487861 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 19487920 Query: 171 gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 230 |||||| ||||| |||| || ||| ||||||||| ||||| | |||||| |||| || Sbjct: 19487921 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 19487980 Query: 231 ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 290 |||||||||||| |||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 19487981 ggtggactgcgaggccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 19488040 Query: 291 gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccgtcccc 350 || |||||||||||| |||| || |||||||||||||||| |||| |||||| || Sbjct: 19488041 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 19488100 Query: 351 ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 410 || || || ||||||||||| ||||||||||||||||||| ||||||| ||||||||| Sbjct: 19488101 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 19488160 Query: 411 cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggg 470 | |||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 19488161 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcccggccccggg 19488220 Query: 471 gccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacgg 530 |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || Sbjct: 19488221 gccgctcgccaccgcgccggcgttcctgttcacatgcggcgccacgttcctgaccgaagg 19488280 Query: 531 cctcgccgccggcgccaccg 550 |||||||||||||||||||| Sbjct: 19488281 cctcgccgccggcgccaccg 19488300 Score = 280 bits (141), Expect = 5e-72 Identities = 369/445 (82%) Strand = Plus / Plus Query: 106 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 165 ||||| |||||||||||||||||||| |||||| ||| ||| ||||||| ||||| Sbjct: 19490349 ccgagagccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgcgacggtg 19490408 Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 225 ||||||||||| ||||| ||||| || |||| ||||||||| ||||| | |||||| || Sbjct: 19490409 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcgccacg 19490468 Query: 226 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcg 285 ||||||||||||||||| ||||||||||||| |||||||||||| | || ||||||| | Sbjct: 19490469 ctctgggtggactgcgataccgggtacgtgtcgtcgtcctacgcgcgtgtcccgtgcggg 19490528 Query: 286 tccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccg 345 ||||||| |||||||||| | |||| | | |||| || ||||||| ||||| ||| Sbjct: 19490529 tccaagccgtgccgcctcaccaagaccggcggctgcttcaacagctgcttcggcgcgcca 19490588 Query: 346 tccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtc 405 ||||||| || || |||| |||||| |||||||||||||| ||||| |||||||||||| Sbjct: 19490589 tccccggcctgcctcaacggcacctgcagcgggttcccggataacacggtcacgcgcgtc 19490648 Query: 406 agcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcg 465 | | ||||| ||| |||||||||||||||| ||| ||||||||||||||||| | ||| Sbjct: 19490649 acggctggcggcaacatcatcaccgacgtgctctcgctgcccaccaccttccgcaccgcg 19490708 Query: 466 ccggggccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgacc 525 ||||||||| ||||||||| ||||| ||| ||||||| || || ||||||| ||||| Sbjct: 19490709 ccggggccgttcgccaccgtgccggagttcttgttcacctgtggccacacgttcttgacc 19490768 Query: 526 gacggcctcgccgccggcgccaccg 550 || |||||||| ||||||||||| Sbjct: 19490769 gagggcctcgctaacggcgccaccg 19490793 Score = 240 bits (121), Expect = 4e-60 Identities = 358/437 (81%) Strand = Plus / Plus Query: 105 cccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacggg 164 ||||||||||||| ||||||||||| |||||| |||||||| ||||||| ||||| Sbjct: 19494733 cccgagcgccgtgctgctgccggtggacaaggacggcgcaacgcagcagtacgtgacgat 19494792 Query: 165 cttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctc 224 ||| ||||||| ||||| || || |||| ||||||| | ||||| | |||||| Sbjct: 19494793 gttctggcagcggacgccgagtgtgcccgtgaaggccgtggttgacctcgcgggcgccat 19494852 Query: 225 gctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgc 284 |||||||||||||||||| ||||||||| ||| ||||| || ||| |||||||||||| Sbjct: 19494853 gctctgggtggactgcgagtccgggtacgagtcgtcgtcgtatgcgcgcgtgccgtgcgg 19494912 Query: 285 gtccaagctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagcc 344 |||||||| ||||||||||||||||| | ||||| |||||| ||||| ||| | | Sbjct: 19494913 gtccaagccttgccgcctcgcgaagagcgccgcctgtgccaccggctgctccggtgcggc 19494972 Query: 345 gtccccggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgt 404 ||||||||| || || ||||||||||| | ||||||||||||| |||| |||||||||| Sbjct: 19494973 gtccccgggctgcctcaacgacacctgcaccgggttcccggagtacactatcacgcgcgt 19495032 Query: 405 cagcaccggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggc 464 |||||||||||| ||| ||||||| ||| ||||||| || |||||||| |||||| Sbjct: 19495033 cagcaccggcggcaacatcatcacagacaagctgtcgctgtacaccacctgccgccccat 19495092 Query: 465 gccggggccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgac 524 ||||| |||| |||||||||||||| |||||||||||| ||||| || |||| |||||| Sbjct: 19495093 gccggttccgcgcgccaccgcgccggggtttctgttcacctgcggtgcaacgtccctgac 19495152 Query: 525 cgacggcctcgccgccg 541 | | ||||||| ||||| Sbjct: 19495153 caaaggcctcggcgccg 19495169 Score = 210 bits (106), Expect = 4e-51 Identities = 169/190 (88%) Strand = Plus / Plus Query: 361 aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 420 ||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| ||| Sbjct: 19501991 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 19502050 Query: 421 ctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggggccgctcgcc 480 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 19502051 atcatcaccgacgtgctgtcgctgcccaccaccttccgccccgcgccggggccgctcgcc 19502110 Query: 481 accgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacggcctcgccgcc 540 |||||||||||||| ||||||| ||||| ||||||| ||||| | || ||||||| | Sbjct: 19502111 accgcgccggcgttcttgttcacctgcggccacacgttcttgacccaaggactcgccgac 19502170 Query: 541 ggcgccaccg 550 |||||||||| Sbjct: 19502171 ggcgccaccg 19502180 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 106 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 165 |||||| ||||||||||||||||||| |||||| ||| ||| ||||||| ||||| Sbjct: 19501736 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 19501795 Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 225 ||||||||||| ||||| ||||| || |||| ||||||||| ||||| | ||| || | Sbjct: 19501796 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 19501855 Query: 226 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 283 |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 19501856 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 19501913
>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full insert sequence Length = 1474 Score = 383 bits (193), Expect = e-103 Identities = 379/440 (86%), Gaps = 2/440 (0%) Strand = Plus / Plus Query: 111 cgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggcttccg 170 ||||||| ||||||||||||| |||||| ||| ||| ||||||| ||||| ||||| Sbjct: 143 cgccgtgctgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatgttccg 202 Query: 171 gcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcgctctg 230 |||||| ||||| |||| || ||| ||||||||| ||||| | |||||| |||| || Sbjct: 203 gcagcggacgccgcaggcgcccttgaaggccgtgctggacctcgccggcgccacgctgtg 262 Query: 231 ggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcgcgtccaa 290 ||||||||| | |||||||||||||| ||||| |||||| |||||||||||| |||||| Sbjct: 263 ggtggactgag--gccgggtacgtgtcgtcgtcgtacgcgcgcgtgccgtgcgggtccaa 320 Query: 291 gctgtgccgcctcgcgaagagtgtggcctgcgccaccagctgcgtcggcaagccgtcccc 350 || |||||||||||| |||| || |||||||||||||||| |||| |||||| || Sbjct: 321 gcagtgccgcctcgccaagaccaacgcgtgcgccaccagctgcgacggcgcgccgtcgcc 380 Query: 351 ggggtgtctgaacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcac 410 || || || ||||||||||| ||||||||||||||||||| ||||||| ||||||||| Sbjct: 381 ggcctgcctcaacgacacctgcggcgggttcccggagaacacggtcacgcacgtcagcac 440 Query: 411 cggcgggaacctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggg 470 | |||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 441 cagcggcaacgtcatcaccgacgtgctgtccctgcccaccaccttccgcccggccccggg 500 Query: 471 gccgctcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacgg 530 |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || Sbjct: 501 gccgctcgccaccgcgccggcgttcctgttcacatgcggcgccacgttcctgaccgaagg 560 Query: 531 cctcgccgccggcgccaccg 550 |||||||||||||||||||| Sbjct: 561 cctcgccgccggcgccaccg 580
>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full insert sequence Length = 1741 Score = 210 bits (106), Expect = 4e-51 Identities = 169/190 (88%) Strand = Plus / Plus Query: 361 aacgacacctgtagcgggttcccggagaacaccgtcacgcgcgtcagcaccggcgggaac 420 ||||||||||| |||| ||||||| ||||||||| |||| |||||||||||| ||| ||| Sbjct: 582 aacgacacctgcagcgagttcccgaagaacaccgccacgagcgtcagcaccgccggcaac 641 Query: 421 ctcatcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccggggccgctcgcc 480 |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 642 atcatcaccgacgtgctgtcgctgcccaccaccttccgccccgcgccggggccgctcgcc 701 Query: 481 accgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacggcctcgccgcc 540 |||||||||||||| ||||||| ||||| ||||||| ||||| | || ||||||| | Sbjct: 702 accgcgccggcgttcttgttcacctgcggccacacgttcttgacccaaggactcgccgac 761 Query: 541 ggcgccaccg 550 |||||||||| Sbjct: 762 ggcgccaccg 771 Score = 147 bits (74), Expect = 4e-32 Identities = 152/178 (85%) Strand = Plus / Plus Query: 106 ccgagcgccgtggtgctgccggtgaggaaggacagcgcaacggggcagtacctgacgggc 165 |||||| ||||||||||||||||||| |||||| ||| ||| ||||||| ||||| Sbjct: 327 ccgagctccgtggtgctgccggtgagcaaggacgacgcgacgcagcagtacgtgacgatg 386 Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgaccttggaggcgcctcg 225 ||||||||||| ||||| ||||| || |||| ||||||||| ||||| | ||| || | Sbjct: 387 ttccggcagcggacgccgcaggtgcccgtgaaggccgtgctggacctcgcgggcaccatg 446 Query: 226 ctctgggtggactgcgacgccgggtacgtgtcctcgtcctacgcgggcgtgccgtgcg 283 |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| Sbjct: 447 ctctgggtggactgcgacgccgggtacgtgtcctcgtcgtacgccggcgtgcggtgcg 504
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 109 bits (55), Expect = 1e-20 Identities = 111/131 (84%), Gaps = 9/131 (6%) Strand = Plus / Plus Query: 425 tcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccgg---------ggccgc 475 ||||||||||||||||| ||||||||||||||| | |||| |||| |||||| Sbjct: 15505234 tcaccgacgtgctgtcgctgcccaccaccttcccctcggccccggtccggcaagggccgc 15505293 Query: 476 tcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacggcctcg 535 ||||||||||||||||||| |||||||| ||||| |||||| ||||||| | ||||||| Sbjct: 15505294 tcgccaccgcgccggcgttcctgttcacctgcgggcccacgtccctgacccaaggcctcg 15505353 Query: 536 ccgccggcgcc 546 ||||||||||| Sbjct: 15505354 ccgccggcgcc 15505364 Score = 61.9 bits (31), Expect = 2e-06 Identities = 119/148 (80%), Gaps = 9/148 (6%) Strand = Plus / Plus Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 222 |||| |||||||||||| | ||| |||||| ||||||| | ||||| || |||||| Sbjct: 15504957 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 15505016 Query: 223 tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 276 ||||||||||||||||||| ||||||||||| ||| || || ||||| |||||| Sbjct: 15505017 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 15505076 Query: 277 ccgtgcgcgtccaagctgtgccgcctcg 304 || |||| |||||||| |||||||||| Sbjct: 15505077 ccatgcgggtccaagccctgccgcctcg 15505104
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 109 bits (55), Expect = 1e-20 Identities = 111/131 (84%), Gaps = 9/131 (6%) Strand = Plus / Plus Query: 425 tcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccgg---------ggccgc 475 ||||||||||||||||| ||||||||||||||| | |||| |||| |||||| Sbjct: 26089 tcaccgacgtgctgtcgctgcccaccaccttcccctcggccccggtccggcaagggccgc 26148 Query: 476 tcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacggcctcg 535 ||||||||||||||||||| |||||||| ||||| |||||| ||||||| | ||||||| Sbjct: 26149 tcgccaccgcgccggcgttcctgttcacctgcgggcccacgtccctgacccaaggcctcg 26208 Query: 536 ccgccggcgcc 546 ||||||||||| Sbjct: 26209 ccgccggcgcc 26219 Score = 61.9 bits (31), Expect = 2e-06 Identities = 119/148 (80%), Gaps = 9/148 (6%) Strand = Plus / Plus Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 222 |||| |||||||||||| | ||| |||||| ||||||| | ||||| || |||||| Sbjct: 25812 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 25871 Query: 223 tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 276 ||||||||||||||||||| ||||||||||| ||| || || ||||| |||||| Sbjct: 25872 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 25931 Query: 277 ccgtgcgcgtccaagctgtgccgcctcg 304 || |||| |||||||| |||||||||| Sbjct: 25932 ccatgcgggtccaagccctgccgcctcg 25959
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 109 bits (55), Expect = 1e-20 Identities = 111/131 (84%), Gaps = 9/131 (6%) Strand = Plus / Plus Query: 425 tcaccgacgtgctgtcggtgcccaccaccttccgcccggcgccgg---------ggccgc 475 ||||||||||||||||| ||||||||||||||| | |||| |||| |||||| Sbjct: 154526 tcaccgacgtgctgtcgctgcccaccaccttcccctcggccccggtccggcaagggccgc 154585 Query: 476 tcgccaccgcgccggcgtttctgttcacgtgcggagccacgttcctgaccgacggcctcg 535 ||||||||||||||||||| |||||||| ||||| |||||| ||||||| | ||||||| Sbjct: 154586 tcgccaccgcgccggcgttcctgttcacctgcgggcccacgtccctgacccaaggcctcg 154645 Query: 536 ccgccggcgcc 546 ||||||||||| Sbjct: 154646 ccgccggcgcc 154656 Score = 61.9 bits (31), Expect = 2e-06 Identities = 119/148 (80%), Gaps = 9/148 (6%) Strand = Plus / Plus Query: 166 ttccggcagcgaacgccccaggtcccggtgacggccgtgctcgacct---tggaggcgcc 222 |||| |||||||||||| | ||| |||||| ||||||| | ||||| || |||||| Sbjct: 154249 ttccagcagcgaacgccgcgggtggcggtgaaggccgtggtggacctctcgggcggcgcc 154308 Query: 223 tcgctctgggtggactgcga------cgccgggtacgtgtcctcgtcctacgcgggcgtg 276 ||||||||||||||||||| ||||||||||| ||| || || ||||| |||||| Sbjct: 154309 acgctctgggtggactgcgacgccgccgccgggtacgcgtcgtcctcgtacgccggcgtg 154368 Query: 277 ccgtgcgcgtccaagctgtgccgcctcg 304 || |||| |||||||| |||||||||| Sbjct: 154369 ccatgcgggtccaagccctgccgcctcg 154396
>ref|XM_512475.1| PREDICTED: Pan troglodytes similar to myosin IXB (LOC455819), mRNA Length = 2636 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tgtggcctgcgccaccagctgc 333 |||||||||||||||||||||| Sbjct: 542 tgtggcctgcgccaccagctgc 521
>ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA Length = 7488 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tgtggcctgcgccaccagctgc 333 |||||||||||||||||||||| Sbjct: 390 tgtggcctgcgccaccagctgc 369
>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence Length = 174034 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tgtggcctgcgccaccagctgc 333 |||||||||||||||||||||| Sbjct: 173127 tgtggcctgcgccaccagctgc 173106
>gb|AC092476.1|AC092476 Homo sapiens chromosome 19 clone LLNLR-231E1, complete sequence Length = 2400 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tgtggcctgcgccaccagctgc 333 |||||||||||||||||||||| Sbjct: 95 tgtggcctgcgccaccagctgc 74
>dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, partial cds, clone: ef05385 Length = 7607 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tgtggcctgcgccaccagctgc 333 |||||||||||||||||||||| Sbjct: 537 tgtggcctgcgccaccagctgc 516
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 cgacggcctcgccgccggcgcc 546 |||||||||||||||||||||| Sbjct: 3940653 cgacggcctcgccgccggcgcc 3940674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 cgacggcctcgccgccggcgc 545 ||||||||||||||||||||| Sbjct: 400616 cgacggcctcgccgccggcgc 400636 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgtgctcgtgccgcgcggcc 96 |||||||||||||||||||| Sbjct: 4935908 cgtgctcgtgccgcgcggcc 4935927 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ccgacggcctcgccgccggc 543 |||||||||||||||||||| Sbjct: 2784111 ccgacggcctcgccgccggc 2784092
>gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds Length = 6069 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tgtggcctgcgccaccagctgc 333 |||||||||||||||||||||| Sbjct: 390 tgtggcctgcgccaccagctgc 369
>ref|NM_193851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 gccacgttcctgaccgacggcctcg 535 ||||| ||||||||||||||||||| Sbjct: 638 gccaccttcctgaccgacggcctcg 614
>ref|XM_540131.2| PREDICTED: Canis familiaris similar to Hypothetical UPF0184 protein C9orf16 homolog (LOC483016), mRNA Length = 1022 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 ccaccttccgcccggcgccgg 469 ||||||||||||||||||||| Sbjct: 58 ccaccttccgcccggcgccgg 78
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ctctgccagccagccctcagc 27 ||||||||||||||||||||| Sbjct: 2946487 ctctgccagccagccctcagc 2946467
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 520 ctgaccgacggcctcgccgccggcg 544 |||||||||| |||||||||||||| Sbjct: 2125593 ctgaccgacgccctcgccgccggcg 2125569
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 gccacgttcctgaccgacggcctcg 535 ||||| ||||||||||||||||||| Sbjct: 15327291 gccaccttcctgaccgacggcctcg 15327267
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 ccgagcgccgtggtgctgccggtga 130 ||||||||||||||||||| ||||| Sbjct: 1844748 ccgagcgccgtggtgctgctggtga 1844772
>dbj|AP003199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045D11 Length = 142320 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 gccacgttcctgaccgacggcctcg 535 ||||| ||||||||||||||||||| Sbjct: 4832 gccaccttcctgaccgacggcctcg 4808
>dbj|AP003198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1039D07 Length = 135301 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 gccacgttcctgaccgacggcctcg 535 ||||| ||||||||||||||||||| Sbjct: 68650 gccaccttcctgaccgacggcctcg 68626
>dbj|AK108314.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-G07, full insert sequence Length = 821 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 gccacgttcctgaccgacggcctcg 535 ||||| ||||||||||||||||||| Sbjct: 724 gccaccttcctgaccgacggcctcg 700
>ref|XM_481921.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 301 gccgctcgccaccgcgccgg 320 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 86 gccgctcgccaccgcgccgg 105
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tccgcccggcgccggggccg 474 |||||||||||||||||||| Sbjct: 2942773 tccgcccggcgccggggccg 2942754
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aggtcccggtgacggccgtg 204 |||||||||||||||||||| Sbjct: 3188471 aggtcccggtgacggccgtg 3188490
>gb|DQ175936.1| Hordeum vulgare subsp. vulgare clone 33-32A-RB flanking T-DNA insertion sequence Length = 943 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 cgacggcctcgccgccggcg 544 |||||||||||||||||||| Sbjct: 824 cgacggcctcgccgccggcg 805
>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island Length = 130000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 gaccgacggcctcgccgccg 541 |||||||||||||||||||| Sbjct: 30032 gaccgacggcctcgccgccg 30013
>ref|XM_844545.1| PREDICTED: Canis familiaris similar to growth factor receptor-bound protein 10 isoform a (LOC607755), mRNA Length = 1323 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 cgcgcgtcagcaccggcggg 417 |||||||||||||||||||| Sbjct: 328 cgcgcgtcagcaccggcggg 309
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tccgcccggcgccggggccg 474 |||||||||||||||||||| Sbjct: 96595 tccgcccggcgccggggccg 96576
>emb|CT009536.7| Mouse DNA sequence from clone RP23-25A7 on chromosome 14, complete sequence Length = 239515 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tctgccagccagccctcagc 27 |||||||||||||||||||| Sbjct: 131523 tctgccagccagccctcagc 131504
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cctcgccgccggcgccaccg 550 |||||||||||||||||||| Sbjct: 1389051 cctcgccgccggcgccaccg 1389032
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ccgacggcctcgccgccggc 543 |||||||||||||||||||| Sbjct: 1335346 ccgacggcctcgccgccggc 1335327
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ccgacggcctcgccgccggc 543 |||||||||||||||||||| Sbjct: 4569323 ccgacggcctcgccgccggc 4569304
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 tccgcccggcgccggggccg 474 |||||||||||||||||||| Sbjct: 173593 tccgcccggcgccggggccg 173574
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 cctcgccgccggcgccaccg 550 |||||||||||||||||||| Sbjct: 54395 cctcgccgccggcgccaccg 54414
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cctcgccgccggcgccaccg 550 |||||||||||||||||||| Sbjct: 2669940 cctcgccgccggcgccaccg 2669921
>emb|CR390901.1| Gallus gallus finished cDNA, clone ChEST399n18 Length = 885 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 ccgcccggcgccggggccgc 475 |||||||||||||||||||| Sbjct: 77 ccgcccggcgccggggccgc 96
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 16377071 gccgctcgccaccgcgccgg 16377090 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 16376856 gccgctcgccaccgcgccgg 16376875
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 8030785 gccgctcgccaccgcgccgg 8030766
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 138303 gccgctcgccaccgcgccgg 138284
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 54554 gccgctcgccaccgcgccgg 54535
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 82923 gccgctcgccaccgcgccgg 82942 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 gccgctcgccaccgcgccgg 490 |||||||||||||||||||| Sbjct: 82708 gccgctcgccaccgcgccgg 82727
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cctacgcgggcgtgccgtgc 282 |||||||||||||||||||| Sbjct: 740360 cctacgcgggcgtgccgtgc 740379
>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940122D9, complete sequence Length = 114898 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tggcctgcgccaccagctgc 333 |||||||||||||||||||| Sbjct: 9582 tggcctgcgccaccagctgc 9601
>gb|U18777.1|MAU18777 Mycobacterium avium plasmid pLR7 Rep gene, complete cds Length = 1828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cctacgcgggcgtgccgtgc 282 |||||||||||||||||||| Sbjct: 288 cctacgcgggcgtgccgtgc 307 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,820,936 Number of Sequences: 3902068 Number of extensions: 2820936 Number of successful extensions: 65979 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63462 Number of HSP's gapped (non-prelim): 2509 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
