Clone Name | bart16e06 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1047 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 gttcatctctatgcccaccgacca 93 |||||||||| ||||||||||||| Sbjct: 78 gttcatctctctgcccaccgacca 101
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 gttcatctctatgcccaccgacca 93 |||||||||| ||||||||||||| Sbjct: 35228724 gttcatctctctgcccaccgacca 35228701
>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full insert sequence Length = 1413 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 gttcatctctatgcccaccgacca 93 |||||||||| ||||||||||||| Sbjct: 181 gttcatctctctgcccaccgacca 204
>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for class III peroxidase 60 precursor, exons 1-3 Length = 1221 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 gttcatctctatgcccaccgacca 93 |||||||||| ||||||||||||| Sbjct: 78 gttcatctctctgcccaccgacca 101
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 gctcgccttcgacttccacgccga 156 ||||||| |||||||||||||||| Sbjct: 7111998 gctcgccgtcgacttccacgccga 7111975
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 70 gttcatctctatgcccaccgacca 93 |||||||||| ||||||||||||| Sbjct: 24569 gttcatctctctgcccaccgacca 24546
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Minus Query: 63 cctcggcgttcatctctatgccc 85 |||||||||||||||| |||||| Sbjct: 1713145 cctcggcgttcatctccatgccc 1713123
>ref|XM_581197.2| PREDICTED: Bos taurus similar to Tuberin (Tuberous sclerosis 2 homolog protein) (LOC504985), partial mRNA Length = 5686 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 131 gggctcgccttcgacttcc 149 ||||||||||||||||||| Sbjct: 1993 gggctcgccttcgacttcc 2011
>gb|AC116487.14| Mus musculus chromosome 15, clone RP23-428I9, complete sequence Length = 174945 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 ccgccgtgctgtgcccggc 45 ||||||||||||||||||| Sbjct: 87647 ccgccgtgctgtgcccggc 87629
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 134 ctcgccttcgacttccacgccga 156 |||||||||||||||| |||||| Sbjct: 3474123 ctcgccttcgacttcctcgccga 3474145
>gb|U77606.1|GCU77606 Glomerella cingulata two-component histidine kinase CHK-1 (chk-1) mRNA, complete cds Length = 2559 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 139 cttcgacttccacgccgac 157 ||||||||||||||||||| Sbjct: 2141 cttcgacttccacgccgac 2123
>gb|U77605.1|GCU77605 Glomerella cingulata two-component histidine kinase CHK-1 (chk-1) gene, complete cds Length = 3766 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 139 cttcgacttccacgccgac 157 ||||||||||||||||||| Sbjct: 2960 cttcgacttccacgccgac 2942 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 139 cttcgacttccacgccgac 157 ||||||||||||||||||| Sbjct: 114 cttcgacttccacgccgac 132 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 861,185 Number of Sequences: 3902068 Number of extensions: 861185 Number of successful extensions: 56121 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55982 Number of HSP's gapped (non-prelim): 139 length of query: 167 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 145 effective length of database: 17,147,199,772 effective search space: 2486343966940 effective search space used: 2486343966940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)