ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart16d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_480781.1| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
3dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
4dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
5gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
6gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
7gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
13emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 46 0.12
14gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.12
15ref|XM_475904.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
16ref|NM_188160.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
17gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
18gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
20dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
21gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, r... 42 1.8
22dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
23dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
24dbj|AK105327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
25dbj|AK068460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
26gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33... 42 1.8
27ref|XM_509664.1| PREDICTED: Pan troglodytes LOC452579 (LOC452579... 40 7.1
28ref|XM_482402.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
29ref|XM_478511.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.1
30ref|XM_473583.1| Oryza sativa (japonica cultivar-group), predic... 40 7.1
31gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
32gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
33gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.1
35gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
36gb|BC038953.1| Homo sapiens component of oligomeric golgi comple... 40 7.1
37gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.1
38emb|AL606514.3| Human DNA sequence from clone RP11-38J6 on chrom... 40 7.1
39emb|AL360176.22| Human DNA sequence from clone RP11-124H7 on chr... 40 7.1
40emb|AL356321.9| Human DNA sequence from clone RP11-282M24 on chr... 40 7.1
41emb|AL157414.19| Human DNA sequence from clone RP11-560A15 on ch... 40 7.1
42gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.1
43gb|DQ397830.1| Cenarchaeum symbiosum clone C01C10, complete sequ... 40 7.1
44gb|DQ397569.1| Cenarchaeum symbiosum clone C07D08, complete sequ... 40 7.1
45gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.1
46emb|CR609778.1| full-length cDNA clone CS0DB006YA16 of Neuroblas... 40 7.1
47gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 7.1
48ref|NM_031431.2| Homo sapiens component of oligomeric golgi comp... 40 7.1
49gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.1
50gb|AF349676.1|AF349676 Homo sapiens vesicle docking protein SEC3... 40 7.1
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
52dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
55gb|AF332595.1|AF332595 Homo sapiens tethering factor SEC34 (SEC3... 40 7.1
56dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
57dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
58dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
59dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
60dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
61dbj|AK026305.1| Homo sapiens cDNA: FLJ22652 fis, clone HSI07445,... 40 7.1
62dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.1
63emb|AJ327388.1|HSA327388 Homo sapiens genomic sequence surroundi... 40 7.1
64gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.1
65emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4,... 40 7.1
66gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 40 7.1
67gb|M62957.1|ZMOPGIG Zymomonas mobilis phosphoglucoseisomerase ge... 40 7.1
68gb|M33965.1|SMAPHOAA S.marcescens alkaline phosphatase (phoA) ge... 40 7.1 
>ref|XM_480781.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 393

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Plus

                                                                       
Query: 285 gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 344
           |||||| ||||||||   |||||||||  || |||||| ||| ||||| | |||||| ||
Sbjct: 78  gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 137

                                      
Query: 345 ccggtcaaccatcttcactgtcggtgg 371
           |||||| | ||||||||||||||||||
Sbjct: 138 ccggtcgaacatcttcactgtcggtgg 164
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                           
Query: 285     gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 344
               |||||| ||||||||   |||||||||  || |||||| ||| ||||| | |||||| ||
Sbjct: 7692880 gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 7692821

                                          
Query: 345     ccggtcaaccatcttcactgtcggtgg 371
               |||||| | ||||||||||||||||||
Sbjct: 7692820 ccggtcgaacatcttcactgtcggtgg 7692794



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 303     cgggtacagcctcaagaaggacatgggtgtagacaagttcgtc 345
               |||||||||||||||||||| ||| || || ||| ||||||||
Sbjct: 7688446 cgggtacagcctcaagaagggcatcggcgtggacgagttcgtc 7688404



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 19846509 ccgcctccgcgaccgaccgccgcc 19846486
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>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0494D11
          Length = 149198

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                          
Query: 285    gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 344
              |||||| ||||||||   |||||||||  || |||||| ||| ||||| | |||||| ||
Sbjct: 118075 gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 118016

                                         
Query: 345    ccggtcaaccatcttcactgtcggtgg 371
              |||||| | ||||||||||||||||||
Sbjct: 118015 ccggtcgaacatcttcactgtcggtgg 117989



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 303    cgggtacagcctcaagaaggacatgggtgtagacaagttcgtc 345
              |||||||||||||||||||| ||| || || ||| ||||||||
Sbjct: 113641 cgggtacagcctcaagaagggcatcggcgtggacgagttcgtc 113599
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>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1221_H04
          Length = 129387

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                         
Query: 285   gcacatctttgagattgccgggtacagcctcaagaaggacatgggtgtagacaagttcgt 344
             |||||| ||||||||   |||||||||  || |||||| ||| ||||| | |||||| ||
Sbjct: 33603 gcacatatttgagatcaacgggtacagattccagaagggcatcggtgttggcaagtttgt 33544

                                        
Query: 345   ccggtcaaccatcttcactgtcggtgg 371
             |||||| | ||||||||||||||||||
Sbjct: 33543 ccggtcgaacatcttcactgtcggtgg 33517



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 303   cgggtacagcctcaagaaggacatgggtgtagacaagttcgtc 345
             |||||||||||||||||||| ||| || || ||| ||||||||
Sbjct: 29169 cgggtacagcctcaagaagggcatcggcgtggacgagttcgtc 29127
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>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05,
             complete sequence
          Length = 109126

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 104   ccgccgcctccgccaccgaccgccgcc 130
             ||||||||||||| |||||||||||||
Sbjct: 43444 ccgccgcctccgcgaccgaccgccgcc 43418
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>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07,
              complete sequence
          Length = 139180

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 104    ccgccgcctccgccaccgaccgccgcc 130
              ||||||||||||| |||||||||||||
Sbjct: 137621 ccgccgcctccgcgaccgaccgccgcc 137595
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>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0095P22, complete sequence
          Length = 162766

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 106   gccgcctccgccaccgaccgccg 128
             |||||||||||||||||||||||
Sbjct: 32869 gccgcctccgccaccgaccgccg 32891
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 109     gcctccgccaccgaccgccgccc 131
               |||||||||||||||||||||||
Sbjct: 1103568 gcctccgccaccgaccgccgccc 1103590
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 106      gccgcctccgccaccgaccgccg 128
                |||||||||||||||||||||||
Sbjct: 24231760 gccgcctccgccaccgaccgccg 24231782



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 24575327 ccgcctccgcgaccgaccgccgcc 24575350



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      ctccgccgcctccgccaccg 121
                ||||||||||||||||||||
Sbjct: 13776451 ctccgccgcctccgccaccg 13776432
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 104      ccgccgcctccgccaccgaccgccgcc 130
                ||||||||||||| |||||||||||||
Sbjct: 21256838 ccgccgcctccgcgaccgaccgccgcc 21256812



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 106     gccgcctccgccaccgaccgccg 128
               |||||||||||||||||||||||
Sbjct: 4896835 gccgcctccgccaccgaccgccg 4896813



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 100      atctccgccgcctccgccacc 120
                |||||||||||||||||||||
Sbjct: 27538401 atctccgccgcctccgccacc 27538421



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 107     ccgcctccgccaccgaccgccgcc 130
               |||||||||| |||||||||||||
Sbjct: 4350849 ccgcctccgcgaccgaccgccgcc 4350826
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 106      gccgcctccgccaccgaccgccg 128
                |||||||||||||||||||||||
Sbjct: 24543429 gccgcctccgccaccgaccgccg 24543451



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 24886997 ccgcctccgcgaccgaccgccgcc 24887020



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      ctccgccgcctccgccaccg 121
                ||||||||||||||||||||
Sbjct: 13858453 ctccgccgcctccgccaccg 13858434
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 109     gcctccgccaccgaccgccgccc 131
               |||||||||||||||||||||||
Sbjct: 1103568 gcctccgccaccgaccgccgccc 1103590
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 109   gcctccgccaccgaccgccgccc 131
             |||||||||||||||||||||||
Sbjct: 42551 gcctccgccaccgaccgccgccc 42573
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 106    gccgcctccgccaccgaccgccg 128
              |||||||||||||||||||||||
Sbjct: 169243 gccgcctccgccaccgaccgccg 169221
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>ref|XM_475904.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 100 atctccgccgcctccgccacc 120
           |||||||||||||||||||||
Sbjct: 344 atctccgccgcctccgccacc 324
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>ref|NM_188160.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 570

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 104 ccgccgcctccgccaccgaccgccg 128
           |||| ||||||||||||||||||||
Sbjct: 522 ccgctgcctccgccaccgaccgccg 546
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>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0001A14, complete sequence
          Length = 129292

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 100  atctccgccgcctccgccacc 120
            |||||||||||||||||||||
Sbjct: 5677 atctccgccgcctccgccacc 5697
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>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03,
              complete sequence
          Length = 144601

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 100    atctccgccgcctccgccacc 120
              |||||||||||||||||||||
Sbjct: 134531 atctccgccgcctccgccacc 134551
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 104      ccgccgcctccgccaccgaccgccg 128
                |||| ||||||||||||||||||||
Sbjct: 12989433 ccgctgcctccgccaccgaccgccg 12989457



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 20667605 ccgcctccgcgaccgaccgccgcc 20667582



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 348      gtcaaccatcttcactgtcg 367
                ||||||||||||||||||||
Sbjct: 10365333 gtcaaccatcttcactgtcg 10365314
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 104      ccgccgcctccgccaccgacc 124
                |||||||||||||||||||||
Sbjct: 21739465 ccgccgcctccgccaccgacc 21739485
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>gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone
             BACR30N15, complete sequence
          Length = 178199

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 104   ccgccgcctccgccaccgaccgccgccct 132
             ||||||||||||||||| |||||||||||
Sbjct: 71835 ccgccgcctccgccacc-accgccgccct 71808
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>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   ccgccgcctccgccaccgacc 124
             |||||||||||||||||||||
Sbjct: 91516 ccgccgcctccgccaccgacc 91536
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>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077F02
          Length = 172442

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 104   ccgccgcctccgccaccgaccgccg 128
             |||| ||||||||||||||||||||
Sbjct: 63730 ccgctgcctccgccaccgaccgccg 63754
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>dbj|AK105327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A05, full
           insert sequence
          Length = 692

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 100 atctccgccgcctccgccacc 120
           |||||||||||||||||||||
Sbjct: 403 atctccgccgcctccgccacc 383
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>dbj|AK068460.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153H24, full
           insert sequence
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 100 atctccgccgcctccgccacc 120
           |||||||||||||||||||||
Sbjct: 404 atctccgccgcctccgccacc 384
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>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the
             complete sequence
          Length = 225655

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 104   ccgccgcctccgccaccgaccgccgccct 132
             ||||||||||||||||| |||||||||||
Sbjct: 11618 ccgccgcctccgccacc-accgccgccct 11591
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>ref|XM_509664.1| PREDICTED: Pan troglodytes LOC452579 (LOC452579), mRNA
          Length = 2095

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 522 cgccgcctccgccatcg-ccgccgccctcgcg 492
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>ref|XM_482402.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 897

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 107 ccgcctccgccaccgaccgccgcc 130
           |||||||||| |||||||||||||
Sbjct: 171 ccgcctccgcgaccgaccgccgcc 194
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>ref|XM_478511.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 107 ccgcctccgccaccgaccgccgcc 130
           |||||||||| |||||||||||||
Sbjct: 256 ccgcctccgcgaccgaccgccgcc 233
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>ref|XM_473583.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1194

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 107 ccgcctccgccaccgaccgccgcc 130
           |||||||||| |||||||||||||
Sbjct: 144 ccgcctccgcgaccgaccgccgcc 167
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>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ctccgccgcctccgccaccg 121
             ||||||||||||||||||||
Sbjct: 14010 ctccgccgcctccgccaccg 13991
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>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18
              map near E10005S, complete sequence
          Length = 140920

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    ctccgccgcctccgccaccg 121
              ||||||||||||||||||||
Sbjct: 134260 ctccgccgcctccgccaccg 134241
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>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07,
              complete sequence
          Length = 136465

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    ccgcctccgccaccgaccgccgcc 130
              |||||||||| |||||||||||||
Sbjct: 105456 ccgcctccgcgaccgaccgccgcc 105433
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      gccaccgaccgccgccctcg 134
                ||||||||||||||||||||
Sbjct: 14111264 gccaccgaccgccgccctcg 14111245



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 11694865 ccgcctccgcgaccgaccgccgcc 11694842



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     gcctcaagaaggacatgggt 330
               ||||||||||||||||||||
Sbjct: 9418590 gcctcaagaaggacatgggt 9418571
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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   ccgcctccgccaccgaccgccgcc 130
             |||||||||| |||||||||||||
Sbjct: 52229 ccgcctccgcgaccgaccgccgcc 52252
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>gb|BC038953.1| Homo sapiens component of oligomeric golgi complex 3, mRNA (cDNA
           clone MGC:47545 IMAGE:5756412), complete cds
          Length = 1851

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 47  cgccgcctccgccatcg-ccgccgccctcgcg 17
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>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0022F22, from chromosome 3, complete sequence
          Length = 144268

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gccaccgaccgccgccctcg 134
              ||||||||||||||||||||
Sbjct: 120943 gccaccgaccgccgccctcg 120924
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>emb|AL606514.3| Human DNA sequence from clone RP11-38J6 on chromosome 13 Contains a
             cyclophilin pseudogene, the 5' end of the COG3 gene for
             component of oligomeric golgi complex 3 and a CpG island,
             complete sequence
          Length = 39372

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 105   cgccgcctccgccaccgaccgccgccctcgcg 136
             |||||||||||||| || ||||||||||||||
Sbjct: 35181 cgccgcctccgccatcg-ccgccgccctcgcg 35151
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>emb|AL360176.22| Human DNA sequence from clone RP11-124H7 on chromosome 10 Contains the
             5' end of the MMP21 gene for matrix metalloproteinase 21,
             the UROS gene for uroporphyrinogen III synthase
             (congenital erythropoietic porphyria), the BCCIP gene for
             BRCA2 and CDKN1A interacting protein (TOK-1), the DDX32
             gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32
             (FLJ10694, FLJ10889), the 5' UTR of a novel gene
             (LOC92565) and three CpG islands, complete sequence
          Length = 155699

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   aacctacaaaagctgcagga 196
             ||||||||||||||||||||
Sbjct: 19164 aacctacaaaagctgcagga 19145
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>emb|AL356321.9| Human DNA sequence from clone RP11-282M24 on chromosome 13, complete
             sequence
          Length = 162441

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   acattctttcagcttggatt 494
             ||||||||||||||||||||
Sbjct: 36168 acattctttcagcttggatt 36187
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>emb|AL157414.19| Human DNA sequence from clone RP11-560A15 on chromosome 20 Contains two
             novel genes, the 3' part of the BMP7 for bone
             morphogenetic protein 7 and a CpG island, complete
             sequence
          Length = 124849

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   gcaatgctgaggtgcggaca 477
             ||||||||||||||||||||
Sbjct: 18159 gcaatgctgaggtgcggaca 18178
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>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0093J20, from chromosome 3, complete sequence
          Length = 148635

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   ccgcctccgccaccgaccgccgcc 130
             |||||||||| |||||||||||||
Sbjct: 83960 ccgcctccgcgaccgaccgccgcc 83937
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>gb|DQ397830.1| Cenarchaeum symbiosum clone C01C10, complete sequence
          Length = 40511

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 104   ccgccgcctccgccaccgaccgccgccc 131
             |||||||||||||||||| |||||||||
Sbjct: 34019 ccgccgcctccgccaccg-ccgccgccc 33993
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>gb|DQ397569.1| Cenarchaeum symbiosum clone C07D08, complete sequence
          Length = 43141

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ctccgccgcctccgccaccg 121
             ||||||||||||||||||||
Sbjct: 33170 ctccgccgcctccgccaccg 33151
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     ctccgccgcctccgccaccg 121
               ||||||||||||||||||||
Sbjct: 3272314 ctccgccgcctccgccaccg 3272295
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>emb|CR609778.1| full-length cDNA clone CS0DB006YA16 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 2084

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 146 cgccgcctccgccatcg-ccgccgccctcgcg 116
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
              sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    ccgcctccgccaccgaccgccgcc 130
              |||||||||| |||||||||||||
Sbjct: 145124 ccgcctccgcgaccgaccgccgcc 145147
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>ref|NM_031431.2| Homo sapiens component of oligomeric golgi complex 3 (COG3), mRNA
          Length = 4500

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 116 cgccgcctccgccatcg-ccgccgccctcgcg 86
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    gcctcaagaaggacatgggt 330
              ||||||||||||||||||||
Sbjct: 115990 gcctcaagaaggacatgggt 115971
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>gb|AF349676.1|AF349676 Homo sapiens vesicle docking protein SEC34 mRNA, complete cds
          Length = 4506

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 136 cgccgcctccgccatcg-ccgccgccctcgcg 106
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 28891151 ccgcctccgcgaccgaccgccgcc 28891174
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 19231257 ccgcctccgcgaccgaccgccgcc 19231234
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      gccaccgaccgccgccctcg 134
                ||||||||||||||||||||
Sbjct: 14106239 gccaccgaccgccgccctcg 14106220



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 11691628 ccgcctccgcgaccgaccgccgcc 11691605



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 311     gcctcaagaaggacatgggt 330
               ||||||||||||||||||||
Sbjct: 9416711 gcctcaagaaggacatgggt 9416692
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 19299158 ccgcctccgcgaccgaccgccgcc 19299135
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>gb|AF332595.1|AF332595 Homo sapiens tethering factor SEC34 (SEC34) mRNA, complete cds
          Length = 4258

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 116 cgccgcctccgccatcg-ccgccgccctcgcg 86
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>dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0091L05
          Length = 173983

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   gtcaaccatcttcactgtcg 367
             ||||||||||||||||||||
Sbjct: 76513 gtcaaccatcttcactgtcg 76494
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>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   ccgcctccgccaccgaccgccgcc 130
             |||||||||| |||||||||||||
Sbjct: 14687 ccgcctccgcgaccgaccgccgcc 14664
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>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0681F05
          Length = 144741

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   ccgcctccgccaccgaccgccgcc 130
             |||||||||| |||||||||||||
Sbjct: 20355 ccgcctccgcgaccgaccgccgcc 20332
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   ccgcctccgccaccgaccgccgcc 130
             |||||||||| |||||||||||||
Sbjct: 66956 ccgcctccgcgaccgaccgccgcc 66933
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>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0007M04
          Length = 176293

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    ccgcctccgccaccgaccgccgcc 130
              |||||||||| |||||||||||||
Sbjct: 175460 ccgcctccgcgaccgaccgccgcc 175437
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>dbj|AK026305.1| Homo sapiens cDNA: FLJ22652 fis, clone HSI07445, highly similar to
           AF131829 Homo sapiens clone 25226 mRNA sequence
          Length = 2784

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 105 cgccgcctccgccaccgaccgccgccctcgcg 136
           |||||||||||||| || ||||||||||||||
Sbjct: 116 cgccgcctccgccatcg-ccgccgccctcgcg 86
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>dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E05, full
           insert sequence
          Length = 2499

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 311 gcctcaagaaggacatgggt 330
           ||||||||||||||||||||
Sbjct: 505 gcctcaagaaggacatgggt 486
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>emb|AJ327388.1|HSA327388 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BA3R
          Length = 745

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  gagcacatccctgcttcgcc 34
           ||||||||||||||||||||
Sbjct: 662 gagcacatccctgcttcgcc 681
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      ccgcctccgccaccgaccgccgcc 130
                |||||||||| |||||||||||||
Sbjct: 19242533 ccgcctccgcgaccgaccgccgcc 19242510
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>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
              complete sequence
          Length = 154865

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    ccgcctccgccaccgaccgccgcc 130
              |||||||||| |||||||||||||
Sbjct: 103313 ccgcctccgcgaccgaccgccgcc 103336
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     ctccgccgcctccgccaccg 121
               ||||||||||||||||||||
Sbjct: 1237715 ctccgccgcctccgccaccg 1237734
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>gb|M62957.1|ZMOPGIG Zymomonas mobilis phosphoglucoseisomerase gene, complete cds
          Length = 3212

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 ctccgccgcctccgccaccg 121
           ||||||||||||||||||||
Sbjct: 570 ctccgccgcctccgccaccg 551
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>gb|M33965.1|SMAPHOAA S.marcescens alkaline phosphatase (phoA) gene, complete cds
          Length = 2672

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  ctccgccgcctccgccaccg 121
            ||||||||||||||||||||
Sbjct: 1047 ctccgccgcctccgccaccg 1066


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,530,724
Number of Sequences: 3902068
Number of extensions: 3530724
Number of successful extensions: 74865
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 73371
Number of HSP's gapped (non-prelim): 1498
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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