ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16d01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468121.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1404 Score = 230 bits (116), Expect = 4e-57 Identities = 164/180 (91%) Strand = Plus / Plus Query: 100 cggcggcggcgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacct 159 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 252 cggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgccgacct 311 Query: 160 caaggccgcctaccggaagctcgccatgaggtggcatccggacaggtgctcgtcctccag 219 |||| ||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 312 caagctcgcgtaccggaagctcgccatgagatggcatccggacaaatgctcatcctccag 371 Query: 220 cggcaccaagcacatggaggaggccaaggagaaattccaggagatccagggcgcctattc 279 | | | |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 372 cagtgcaaagcacatggaggaagccaaggagaagttccaggagatccagggcgcctattc 431 Score = 161 bits (81), Expect = 3e-36 Identities = 186/221 (84%) Strand = Plus / Plus Query: 281 gtcctctccgacgccaacaagcggttcctctacgacgtgggggtgtaccaagaagaagaa 340 |||||||| ||| | ||||||||||||||||||||||||||||| || | || || || Sbjct: 602 gtcctctcagactcaaacaagcggttcctctacgacgtgggggtatatgatgatgacgac 661 Query: 341 gacagcgacgacagcatgcaggggatgggggacttccttggtgagatggcccatatgatg 400 | ||| |||| | |||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 662 aatgacgatgacaacctgcaggggatgggggacttcattggtgagatggcccagatgatg 721 Query: 401 agccagacgcggccagcgaggcaggagagcttcgaggagctgcagcagctgtttgtggac 460 |||||| | |||||| |||||||||||||||| | || ||||||||||| || || ||| Sbjct: 722 agccaggcacggccaacgaggcaggagagctttaaagaactgcagcagctattcgtagac 781 Query: 461 atgttccagtctgatattgactcgggattttgcaatggacc 501 |||||||| ||||| |||| ||||| || ||||||||||| Sbjct: 782 atgttccaagctgatcttgattcgggtttctgcaatggacc 822
>dbj|AK067047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092E02, full insert sequence Length = 1403 Score = 230 bits (116), Expect = 4e-57 Identities = 164/180 (91%) Strand = Plus / Plus Query: 100 cggcggcggcgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacct 159 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 251 cggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgccgacct 310 Query: 160 caaggccgcctaccggaagctcgccatgaggtggcatccggacaggtgctcgtcctccag 219 |||| ||| |||||||||||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 311 caagctcgcgtaccggaagctcgccatgagatggcatccggacaaatgctcatcctccag 370 Query: 220 cggcaccaagcacatggaggaggccaaggagaaattccaggagatccagggcgcctattc 279 | | | |||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 371 cagtgcaaagcacatggaggaagccaaggagaagttccaggagatccagggcgcctattc 430 Score = 161 bits (81), Expect = 3e-36 Identities = 186/221 (84%) Strand = Plus / Plus Query: 281 gtcctctccgacgccaacaagcggttcctctacgacgtgggggtgtaccaagaagaagaa 340 |||||||| ||| | ||||||||||||||||||||||||||||| || | || || || Sbjct: 601 gtcctctcagactcaaacaagcggttcctctacgacgtgggggtatatgatgatgacgac 660 Query: 341 gacagcgacgacagcatgcaggggatgggggacttccttggtgagatggcccatatgatg 400 | ||| |||| | |||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 661 aatgacgatgacaacctgcaggggatgggggacttcattggtgagatggcccagatgatg 720 Query: 401 agccagacgcggccagcgaggcaggagagcttcgaggagctgcagcagctgtttgtggac 460 |||||| | |||||| |||||||||||||||| | || ||||||||||| || || ||| Sbjct: 721 agccaggcacggccaacgaggcaggagagctttaaagaactgcagcagctattcgtagac 780 Query: 461 atgttccagtctgatattgactcgggattttgcaatggacc 501 |||||||| ||||| |||| ||||| || ||||||||||| Sbjct: 781 atgttccaagctgatcttgattcgggtttctgcaatggacc 821
>gb|AY107865.1| Zea mays PCO073209 mRNA sequence Length = 974 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 353 agcatgcaggggatgggggacttccttggtgagatggcccatatgatgagccagacgcgg 412 |||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||| | Sbjct: 158 agcatgcaggggatgggggacttcatcggtgagatggcccagatgatgagccaggcgcag 217 Query: 413 ccagcgaggcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccagtct 472 || ||||||| || ||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 218 ccgacgaggcaagaaagctttgaggagctgcagcagctttttgtggacatgtttcagtcc 277 Query: 473 gatattgactcgggattttgcaatggacctgccaagggccatca 516 |||||||| || ||||| |||||| | ||||||||| |||||| Sbjct: 278 gatattgattcaggattctgcaataggactgccaaggcccatca 321
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 100 cggcggcggcgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacct 159 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 33193840 cggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgccgacct 33193781 Query: 160 caaggccgcctaccggaagctcgccatg 187 |||| ||| |||||||||||||||||| Sbjct: 33193780 caagctcgcgtaccggaagctcgccatg 33193753 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 191 tggcatccggacaggtgctcgtcctccagcggcaccaagcacatggaggaggccaaggag 250 ||||||||||||| ||||| ||||||||| | | |||||||||||||| ||||||||| Sbjct: 33191970 tggcatccggacaaatgctcatcctccagcagtgcaaagcacatggaggaagccaaggag 33191911 Query: 251 aaattccaggagatccagggcgcctattc 279 || |||||||||||||||||||||||||| Sbjct: 33191910 aagttccaggagatccagggcgcctattc 33191882 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 357 tgcaggggatgggggacttccttggtgagatggcccatatgatgagccagacgcggcca 415 |||||||||||||||||||| |||||||||||||||| |||||||||||| | |||||| Sbjct: 33191561 tgcaggggatgggggacttcattggtgagatggcccagatgatgagccaggcacggcca 33191503 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 281 gtcctctccgacgccaacaagcggttcctctacgacgtgggggt 324 |||||||| ||| | ||||||||||||||||||||||||||||| Sbjct: 33191711 gtcctctcagactcaaacaagcggttcctctacgacgtgggggt 33191668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 418 gaggcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccagtctgatat 477 ||||||||||||||| | || ||||||||||| || || ||||||||||| ||||| | Sbjct: 33190706 gaggcaggagagctttaaagaactgcagcagctattcgtagacatgttccaagctgatct 33190647 Query: 478 tgactcgggattttgcaatggacc 501 ||| ||||| || ||||||||||| Sbjct: 33190646 tgattcgggtttctgcaatggacc 33190623 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 62 ggcatggccaccggcggcgacgg 84 ||||||||||||||||||||||| Sbjct: 1913915 ggcatggccaccggcggcgacgg 1913937 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 tcaaggccgcctaccggaagct 180 |||||||||||||||||||||| Sbjct: 34325802 tcaaggccgcctaccggaagct 34325781 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 12018325 taccggaagctggccatgaagtggcacccggaca 12018358 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 cctcctcctcctcccccggcgcaccctccg 46 ||||||||||||||||| |||| ||||||| Sbjct: 11159777 cctcctcctcctccccccgcgccccctccg 11159806 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acctccccttcctcgccgcc 570 |||||||||||||||||||| Sbjct: 27136723 acctccccttcctcgccgcc 27136704
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 100 cggcggcggcgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacct 159 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 23149 cggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgccgacct 23090 Query: 160 caaggccgcctaccggaagctcgccatg 187 |||| ||| |||||||||||||||||| Sbjct: 23089 caagctcgcgtaccggaagctcgccatg 23062 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Minus Query: 191 tggcatccggacaggtgctcgtcctccagcggcaccaagcacatggaggaggccaaggag 250 ||||||||||||| ||||| ||||||||| | | |||||||||||||| ||||||||| Sbjct: 21279 tggcatccggacaaatgctcatcctccagcagtgcaaagcacatggaggaagccaaggag 21220 Query: 251 aaattccaggagatccagggcgcctattc 279 || |||||||||||||||||||||||||| Sbjct: 21219 aagttccaggagatccagggcgcctattc 21191 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 357 tgcaggggatgggggacttccttggtgagatggcccatatgatgagccagacgcggcca 415 |||||||||||||||||||| |||||||||||||||| |||||||||||| | |||||| Sbjct: 20870 tgcaggggatgggggacttcattggtgagatggcccagatgatgagccaggcacggcca 20812 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 281 gtcctctccgacgccaacaagcggttcctctacgacgtgggggt 324 |||||||| ||| | ||||||||||||||||||||||||||||| Sbjct: 21020 gtcctctcagactcaaacaagcggttcctctacgacgtgggggt 20977 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 418 gaggcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccagtctgatat 477 ||||||||||||||| | || ||||||||||| || || ||||||||||| ||||| | Sbjct: 20015 gaggcaggagagctttaaagaactgcagcagctattcgtagacatgttccaagctgatct 19956 Query: 478 tgactcgggattttgcaatggacc 501 ||| ||||| || ||||||||||| Sbjct: 19955 tgattcgggtttctgcaatggacc 19932
>dbj|AK109297.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-D06, full insert sequence Length = 550 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 100 cggcggcggcgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacct 159 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 81 cggcggcggcgacctgtacgccgtgctcgggctcaagaaggagtgctccgacgccgacct 140 Query: 160 caaggccgcctaccggaagctcgccatg 187 |||| ||| |||||||||||||||||| Sbjct: 141 caagctcgcgtaccggaagctcgccatg 168
>dbj|AK111076.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-E11, full insert sequence Length = 828 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 239 gaggccaaggagaaattccaggagatccagggcgcctattcggtcctctccgacgccaac 298 |||||||||||| |||||||||||||||||||||||| || || ||||||||| ||||| Sbjct: 71 gaggccaaggagcgattccaggagatccagggcgcctactccgtgctctccgactccaac 130 Query: 299 aagcggttcctctacgacgt 318 ||||| |||||||||||||| Sbjct: 131 aagcgcttcctctacgacgt 150 Score = 83.8 bits (42), Expect = 6e-13 Identities = 92/109 (84%), Gaps = 6/109 (5%) Strand = Plus / Plus Query: 361 ggggatgggggacttccttggtgagatggcccatatgatgagccagacgcggccagcgag 420 ||||||||| || |||||||| |||||||| || |||||||||||| || ||| ||| Sbjct: 205 ggggatgggcgatttccttggcgagatggcgcagatgatgagccaggcgacgcctgcg-- 262 Query: 421 gcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccag 469 ||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 263 ----gagagcttcgaggagttgcagcagctgttcgtggacatgttccag 307 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tggcatccggacaggtgctcg 211 ||||||||||||||||||||| Sbjct: 14 tggcatccggacaggtgctcg 34
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 109 cgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacctcaaggccgc 168 ||||||||||||||| || || ||||||| ||||||| ||||||||||||||| | ||| Sbjct: 4878822 cgacctgtacgccgtcctcggcctcagcagggagtgcaccgacgccgacctcaggctcgc 4878881 Query: 169 ctaccggaagctcgccatg 187 |||||| |||||||||||| Sbjct: 4878882 ctaccgcaagctcgccatg 4878900 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 421 gcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccag 469 ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 4879585 gcaggagagcttcgaggagttgcagcagctgttcgtggacatgttccag 4879633 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 239 gaggccaaggagaaattccaggagatccagggcgccta 276 |||||||||||| |||||||||||||||||||||||| Sbjct: 4879076 gaggccaaggagcgattccaggagatccagggcgccta 4879113 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 ctctccgacgccaacaagcggttcctctacgacgt 318 ||||||||| |||||||||| |||||||||||||| Sbjct: 4879258 ctctccgactccaacaagcgcttcctctacgacgt 4879292 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 361 ggggatgggggacttccttggtgagatggcccatatgatgagccag 406 ||||||||| || ||||| || |||||||| || |||||||||||| Sbjct: 4879439 ggggatgggcgatttcctcggcgagatggcgcagatgatgagccag 4879484 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tggcatccggacaggtgctcg 211 ||||||||||||||||||||| Sbjct: 4879019 tggcatccggacaggtgctcg 4879039
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 85.7 bits (43), Expect = 2e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 109 cgacctgtacgccgtgctggggctcagcaaggagtgctccgacgccgacctcaaggccgc 168 ||||||||||||||| || || ||||||| ||||||| ||||||||||||||| | ||| Sbjct: 66305 cgacctgtacgccgtcctcggcctcagcagggagtgcaccgacgccgacctcaggctcgc 66364 Query: 169 ctaccggaagctcgccatg 187 |||||| |||||||||||| Sbjct: 66365 ctaccgcaagctcgccatg 66383 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 421 gcaggagagcttcgaggagctgcagcagctgtttgtggacatgttccag 469 ||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 67068 gcaggagagcttcgaggagttgcagcagctgttcgtggacatgttccag 67116 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 239 gaggccaaggagaaattccaggagatccagggcgccta 276 |||||||||||| |||||||||||||||||||||||| Sbjct: 66559 gaggccaaggagcgattccaggagatccagggcgccta 66596 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 284 ctctccgacgccaacaagcggttcctctacgacgt 318 ||||||||| |||||||||| |||||||||||||| Sbjct: 66741 ctctccgactccaacaagcgcttcctctacgacgt 66775 Score = 44.1 bits (22), Expect = 0.52 Identities = 40/46 (86%) Strand = Plus / Plus Query: 361 ggggatgggggacttccttggtgagatggcccatatgatgagccag 406 ||||||||| || ||||| || |||||||| || |||||||||||| Sbjct: 66922 ggggatgggcgatttcctcggcgagatggcgcagatgatgagccag 66967 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 tggcatccggacaggtgctcg 211 ||||||||||||||||||||| Sbjct: 66502 tggcatccggacaggtgctcg 66522
>dbj|AK104186.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E10, full insert sequence Length = 1041 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 164 gccgcctaccggaagctcgccatgaggtggcatccggacaggtgc 208 ||||||||||||| ||||||||||| |||||| |||||| ||||| Sbjct: 278 gccgcctaccggaggctcgccatgaagtggcacccggaccggtgc 322
>dbj|AK069897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C19, full insert sequence Length = 954 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 164 gccgcctaccggaagctcgccatgaggtggcatccggacaggtgc 208 ||||||||||||| ||||||||||| |||||| |||||| ||||| Sbjct: 276 gccgcctaccggaggctcgccatgaagtggcacccggaccggtgc 320
>dbj|AK066250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056D15, full insert sequence Length = 1103 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 164 gccgcctaccggaagctcgccatgaggtggcatccggacaggtgc 208 ||||||||||||| ||||||||||| |||||| |||||| ||||| Sbjct: 313 gccgcctaccggaggctcgccatgaagtggcacccggaccggtgc 357
>dbj|AK059801.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F12, full insert sequence Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 164 gccgcctaccggaagctcgccatgaggtggcatccggacaggtgc 208 ||||||||||||| ||||||||||| |||||| |||||| ||||| Sbjct: 234 gccgcctaccggaggctcgccatgaagtggcacccggaccggtgc 278
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 103 cggcggcgacctgtacgccgtgc 125 ||||||||||||||||||||||| Sbjct: 279330 cggcggcgacctgtacgccgtgc 279352
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 gatccggcggcgcccggcggcgg 108 ||||||||||||||||||||||| Sbjct: 22365111 gatccggcggcgcccggcggcgg 22365089 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 13753871 cccttcctcgccgccttctccacc 13753848 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 6587046 cccttcctcgccgccttctccacc 6587069 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 6586807 cccttcctcgccgccttctccacc 6586830
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 gatccggcggcgcccggcggcgg 108 ||||||||||||||||||||||| Sbjct: 127119 gatccggcggcgcccggcggcgg 127097
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 gatccggcggcgcccggcggcgg 108 ||||||||||||||||||||||| Sbjct: 1600 gatccggcggcgcccggcggcgg 1578
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 62 ggcatggccaccggcggcgacgg 84 ||||||||||||||||||||||| Sbjct: 53476 ggcatggccaccggcggcgacgg 53498
>dbj|AK065913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044E15, full insert sequence Length = 3570 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 86 gatccggcggcgcccggcggcgg 108 ||||||||||||||||||||||| Sbjct: 121 gatccggcggcgcccggcggcgg 99
>ref|XM_468279.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1596 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tcaaggccgcctaccggaagct 180 |||||||||||||||||||||| Sbjct: 307 tcaaggccgcctaccggaagct 328
>ref|XM_506783.1| PREDICTED Oryza sativa (japonica cultivar-group), P0543C11.34 mRNA Length = 1519 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 196 taccggaagctggccatgaagtggcacccggaca 229
>ref|XM_465165.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 197 taccggaagctggccatgaagtggcacccggaca 230
>ref|XM_465055.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1750 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggcgcaccctccg 46 ||||||||||||||||| |||| ||||||| Sbjct: 491 cctcctcctcctccccccgcgccccctccg 462
>ref|XM_479058.1| Oryza sativa (japonica cultivar-group), mRNA Length = 303 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggcgc 38 |||||||||||||||||||||| Sbjct: 72 cctcctcctcctcccccggcgc 51
>ref|XM_419588.1| PREDICTED: Gallus gallus similar to DKFZp547B1713 protein (LOC421547), mRNA Length = 987 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 tccggcggcgcccggcggcggc 109 |||||||||||||||||||||| Sbjct: 336 tccggcggcgcccggcggcggc 357
>gb|AC126252.3| Mus musculus BAC clone RP23-480B9 from chromosome 17, complete sequence Length = 172380 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 aggagcctcctcctcctccccc 33 |||||||||||||||||||||| Sbjct: 116868 aggagcctcctcctcctccccc 116847
>gb|AF140490.2| Oryza sativa (japonica cultivar-group) heat-shock protein DnaJ mRNA, complete cds Length = 1527 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 201 taccggaagctggccatgaagtggcacccggaca 234
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 gcctcctcctcctcccccggcg 37 |||||||||||||||||||||| Sbjct: 120087 gcctcctcctcctcccccggcg 120108
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 gcctcctcctcctcccccggcg 37 |||||||||||||||||||||| Sbjct: 19466526 gcctcctcctcctcccccggcg 19466547 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctccaccac 581 |||||||||||||||| ||||||| Sbjct: 34863705 cttcctcgccgccatcgccaccac 34863682 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cctccccttcctcgccgcca 571 |||||||||||||||||||| Sbjct: 19744883 cctccccttcctcgccgcca 19744864
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 cctcctcctcctcccccggcgc 38 |||||||||||||||||||||| Sbjct: 24530543 cctcctcctcctcccccggcgc 24530564
>gb|AC154656.2| Mus musculus BAC clone RP24-268M5 from chromosome 16, complete sequence Length = 166376 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 108 gcgacctgtacgccgtgctggggctc 133 ||||||||||||||| |||||||||| Sbjct: 38578 gcgacctgtacgccgggctggggctc 38603
>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1548_F12 Length = 118814 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 tcaaggccgcctaccggaagct 180 |||||||||||||||||||||| Sbjct: 23449 tcaaggccgcctaccggaagct 23428
>dbj|AP005743.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0543C11 Length = 159075 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 115603 taccggaagctggccatgaagtggcacccggaca 115636
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 17 cctcctcctcctcccccggcgcaccctccg 46 ||||||||||||||||| |||| ||||||| Sbjct: 78956 cctcctcctcctccccccgcgccccctccg 78985
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 cctcctcctcctcccccggcgc 38 |||||||||||||||||||||| Sbjct: 23837 cctcctcctcctcccccggcgc 23858
>dbj|AK100011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013139E23, full insert sequence Length = 1362 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 197 taccggaagctggccatgaagtggcacccggaca 230
>dbj|AK072985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149D24, full insert sequence Length = 1749 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggcgcaccctccg 46 ||||||||||||||||| |||| ||||||| Sbjct: 490 cctcctcctcctccccccgcgccccctccg 461
>dbj|AK072338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042B17, full insert sequence Length = 2956 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 gcctcctcctcctcccccggcg 37 |||||||||||||||||||||| Sbjct: 228 gcctcctcctcctcccccggcg 207
>dbj|AK070441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053N20, full insert sequence Length = 1519 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 170 taccggaagctcgccatgaggtggcatccggaca 203 ||||||||||| ||||||| |||||| ||||||| Sbjct: 196 taccggaagctggccatgaagtggcacccggaca 229
>dbj|AK068801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160I05, full insert sequence Length = 1944 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 tcaaggccgcctaccggaagct 180 |||||||||||||||||||||| Sbjct: 307 tcaaggccgcctaccggaagct 328
>gb|AC154912.3| Mus musculus BAC clone RP23-23B10 from 17, complete sequence Length = 228141 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 aggagcctcctcctcctccccc 33 |||||||||||||||||||||| Sbjct: 32525 aggagcctcctcctcctccccc 32504
>emb|CT573362.4| Mouse DNA sequence from clone CH29-545C14 on chromosome 17, complete sequence Length = 58249 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 aggagcctcctcctcctccccc 33 |||||||||||||||||||||| Sbjct: 7870 aggagcctcctcctcctccccc 7849
>ref|NM_190346.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 840 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccggcggcgcccggcggcggc 109 ||||||||||||||||||||| Sbjct: 440 ccggcggcgcccggcggcggc 420
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ggcggcgacggggatccggcggcgc 98 ||||||||||| ||||||||||||| Sbjct: 28268 ggcggcgacggcgatccggcggcgc 28292
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 ggcggcgacggggatccggcggcgc 98 ||||||||||| ||||||||||||| Sbjct: 128956 ggcggcgacggcgatccggcggcgc 128980
>ref|XM_875321.1| PREDICTED: Bos taurus similar to zinc finger protein 295, transcript variant 2 (LOC510136), mRNA Length = 2900 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 74 ggcggcgacggggatccggcggcgcccgg 102 |||||||||||||| ||||||| |||||| Sbjct: 2398 ggcggcgacggggagccggcggggcccgg 2370
>ref|XM_587241.2| PREDICTED: Bos taurus similar to zinc finger protein 295, transcript variant 1 (LOC510136), mRNA Length = 3500 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 74 ggcggcgacggggatccggcggcgcccgg 102 |||||||||||||| ||||||| |||||| Sbjct: 2998 ggcggcgacggggagccggcggggcccgg 2970
>ref|XM_657383.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4871.2), mRNA Length = 1197 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 gccgacctcaaggccgcctac 172 ||||||||||||||||||||| Sbjct: 970 gccgacctcaaggccgcctac 990
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cggccggcgacgcgcgcggca 65 ||||||||||||||||||||| Sbjct: 3194380 cggccggcgacgcgcgcggca 3194400
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 ggccggcgacgcgcgcggcatggcc 70 ||||||||||||||||||| ||||| Sbjct: 2370255 ggccggcgacgcgcgcggcgtggcc 2370279 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 agcacatggaggaggccaag 247 |||||||||||||||||||| Sbjct: 17298780 agcacatggaggaggccaag 17298799 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gccgcctaccggaagctcgccatg 187 ||||||||||||| |||||||||| Sbjct: 10544943 gccgcctaccggaggctcgccatg 10544920
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 558 cttcctcgccgccatctccaccacc 582 |||||||||||||||| |||||||| Sbjct: 11774 cttcctcgccgccatcgccaccacc 11798
>gb|AY376435.1| Paracoccidioides brasiliensis thioredoxin mRNA, complete cds Length = 811 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 557 ccttcctcgccgccatctccaccacctcc 585 ||||| || |||||||||||||||||||| Sbjct: 327 ccttcgtctccgccatctccaccacctcc 355
>gb|AY095998.1| Glycine max DnaJ-like protein mRNA, complete cds Length = 692 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 167 gcctaccggaagctcgccatgaggtggcatccggaca 203 |||||||| || ||||| ||||||||||| ||||||| Sbjct: 135 gcctaccgcaaactcgctatgaggtggcacccggaca 171
>emb|Y11277.1|HVAA40AMY H.vulgare mRNA for alph-amylase, clone aa40 Length = 1615 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 catggccaccggcggcgacgg 84 ||||||||||||||||||||| Sbjct: 732 catggccaccggcggcgacgg 752
>emb|X05166.1|HVMY32B Barley gene for type A alpha-amylase (Amy32b) Length = 2717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 catggccaccggcggcgacgg 84 ||||||||||||||||||||| Sbjct: 1737 catggccaccggcggcgacgg 1757
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ggcggcgacggggatccggcggcgc 98 ||||||||||| ||||||||||||| Sbjct: 7687999 ggcggcgacggcgatccggcggcgc 7687975 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 564 cgccgccatctccaccacctccgc 587 ||||||||||||||||||| |||| Sbjct: 27650205 cgccgccatctccaccaccgccgc 27650228 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 27288060 cccttcctcgccgccttctccacc 27288037 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 27287821 cccttcctcgccgccttctccacc 27287798
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 ggccggcgacgcgcgcggcatggcc 70 ||||||||||||||||||| ||||| Sbjct: 87097 ggccggcgacgcgcgcggcgtggcc 87121
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 tgctccgacgccgacctcaaggccgcctaccggaagctcgccatg 187 ||||||||||||||||| |||||||||| |||||||||||| Sbjct: 22152488 tgctccgacgccgacctgcgcaccgcctaccgcaagctcgccatg 22152532 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 15328784 cccttcctcgccgccttctccacc 15328807 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 1772784 cccttcctcgccgccttctccacc 1772807
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 46 ggccggcgacgcgcgcggcatggcc 70 ||||||||||||||||||| ||||| Sbjct: 2370365 ggccggcgacgcgcgcggcgtggcc 2370389 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 agcacatggaggaggccaag 247 |||||||||||||||||||| Sbjct: 17292321 agcacatggaggaggccaag 17292340 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gccgcctaccggaagctcgccatg 187 ||||||||||||| |||||||||| Sbjct: 10543044 gccgcctaccggaggctcgccatg 10543021
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccggcggcgcccggcggcggc 109 ||||||||||||||||||||| Sbjct: 34996085 ccggcggcgcccggcggcggc 34996065 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctcca 577 |||||||||||||||||||| Sbjct: 19197188 cttcctcgccgccatctcca 19197169 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gcggcgcccggcggcggcga 111 |||||||||||||||||||| Sbjct: 15560899 gcggcgcccggcggcggcga 15560918 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 tcgccgccatctccaccacctccg 586 ||||||||| |||||||||||||| Sbjct: 12953556 tcgccgccacctccaccacctccg 12953533
>gb|AC136767.6| Homo sapiens chromosome 11, clone RP13-25N22, complete sequence Length = 76050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 gccgccatctccaccacctcc 585 ||||||||||||||||||||| Sbjct: 4906 gccgccatctccaccacctcc 4926
>dbj|D87063.1| Emericella nidulans chiB gene for chitinase, complete cds Length = 2400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 gccgacctcaaggccgcctac 172 ||||||||||||||||||||| Sbjct: 1981 gccgacctcaaggccgcctac 2001
>gb|AC103791.17| Homo sapiens chromosome 11, clone CTD-2026O3, complete sequence Length = 66781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 gccgccatctccaccacctcc 585 ||||||||||||||||||||| Sbjct: 26274 gccgccatctccaccacctcc 26254
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 aggccgcctaccggaagctcg 182 ||||||||||||||||||||| Sbjct: 4996346 aggccgcctaccggaagctcg 4996326 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 272 gcctattcggtcctctccgacgccaacaagcgg 304 ||||| ||||||||||||||| || |||||||| Sbjct: 4977549 gcctactcggtcctctccgaccccgacaagcgg 4977517
>gb|AC091196.6| Homo sapiens chromosome 11, clone RP11-371C18, complete sequence Length = 132211 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 gccgccatctccaccacctcc 585 ||||||||||||||||||||| Sbjct: 126514 gccgccatctccaccacctcc 126534
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccggcggcgcccggcggcggc 109 ||||||||||||||||||||| Sbjct: 3235 ccggcggcgcccggcggcggc 3215
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccggcggcgcccggcggcggc 109 ||||||||||||||||||||| Sbjct: 40313 ccggcggcgcccggcggcggc 40293
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 tgctccgacgccgacctcaaggccgcctaccggaagctcgccatg 187 ||||||||||||||||| |||||||||| |||||||||||| Sbjct: 115451 tgctccgacgccgacctgcgcaccgcctaccgcaagctcgccatg 115495
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete sequence Length = 190267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 gccgccatctccaccacctcc 585 ||||||||||||||||||||| Sbjct: 13183 gccgccatctccaccacctcc 13203
>dbj|AK069153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J18, full insert sequence Length = 1816 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 143 tgctccgacgccgacctcaaggccgcctaccggaagctcgccatg 187 ||||||||||||||||| |||||||||| |||||||||||| Sbjct: 121 tgctccgacgccgacctgcgcaccgcctaccgcaagctcgccatg 165
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 90 cggcggcgcccggcggcggcg 110 ||||||||||||||||||||| Sbjct: 1639712 cggcggcgcccggcggcggcg 1639692 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 gccggcgacgcgcgcggcatggcc 70 ||||||||||||||||| |||||| Sbjct: 1977487 gccggcgacgcgcgcgggatggcc 1977464
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 ggccggcgacgcgcgcggcat 66 ||||||||||||||||||||| Sbjct: 3670 ggccggcgacgcgcgcggcat 3690
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ggcggcgacggggatccggcggcgc 98 ||||||||||| ||||||||||||| Sbjct: 7758086 ggcggcgacggcgatccggcggcgc 7758062 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 564 cgccgccatctccaccacctccgc 587 ||||||||||||||||||| |||| Sbjct: 27674193 cgccgccatctccaccaccgccgc 27674216
>gb|M15208.1|BLYAMYG Barley (type A) high pI isozyme of alpha-amylase gene, complete cds Length = 2717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 catggccaccggcggcgacgg 84 ||||||||||||||||||||| Sbjct: 1737 catggccaccggcggcgacgg 1757
>ref|XM_479940.1| Oryza sativa (japonica cultivar-group), mRNA Length = 264 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 44 cccttcctcgccgccttctccacc 67
>ref|XM_475887.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 438 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 183 ctcctcctcctcccccggcg 164
>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940135D9, complete sequence Length = 93659 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 gccggcgacgcgcgcggcatggcc 70 |||||||||||||||||| ||||| Sbjct: 40362 gccggcgacgcgcgcggcgtggcc 40339
>ref|XM_450920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 441 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 95 cccttcctcgccgccttctccacc 118
>ref|NM_196931.1| Oryza sativa (japonica cultivar-group) putative peroxin (OSJNBa0006L06.8), mRNA Length = 1331 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gcctcctcctcctcccccgg 35 |||||||||||||||||||| Sbjct: 218 gcctcctcctcctcccccgg 199
>ref|NM_193195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 699 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 cttcctcgccgccatctcca 577 |||||||||||||||||||| Sbjct: 117 cttcctcgccgccatctcca 136
>ref|XM_472350.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cctccccttcctcgccgcca 571 |||||||||||||||||||| Sbjct: 69 cctccccttcctcgccgcca 50
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 564 cgccgccatctccaccacctccgc 587 ||||||||||||||||||| |||| Sbjct: 71768 cgccgccatctccaccaccgccgc 71745
>gb|AC166648.4| Mus musculus chromosome 5, clone RP23-102C14, complete sequence Length = 203566 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 gagaaattccaggagatccagggc 271 |||||||||||||| ||||||||| Sbjct: 55546 gagaaattccaggatatccagggc 55569
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence Length = 221083 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ggccaaggagaaattccagg 260 |||||||||||||||||||| Sbjct: 137121 ggccaaggagaaattccagg 137140
>gb|DQ187324.1| Mastigamoeba balamuthi Shwachman-Bodian-Diamond protein-like protein mRNA, partial cds Length = 748 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgccgacctcaaggccgcct 170 |||||||||||||||||||| Sbjct: 230 cgccgacctcaaggccgcct 249
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tccggcggcgcccggcggcg 107 |||||||||||||||||||| Sbjct: 2696446 tccggcggcgcccggcggcg 2696427
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ggcggcgcccggcggcggcg 110 |||||||||||||||||||| Sbjct: 99718 ggcggcgcccggcggcggcg 99699
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 148 cgacgccgacctcaaggccgcctaccggaagctcgccatgaggtggca 195 ||||| |||||||||| || ||||| ||||||||||||| |||||| Sbjct: 118631 cgacgacgacctcaagaaggcgtaccgcaagctcgccatgaagtggca 118584
>ref|XM_606964.2| PREDICTED: Bos taurus similar to CG10948-PC, isoform C (LOC528538), partial mRNA Length = 1053 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 atggaggaggccaaggagaa 252 |||||||||||||||||||| Sbjct: 774 atggaggaggccaaggagaa 793
>gb|BT015235.1| Drosophila melanogaster RE05635 full insert cDNA Length = 6087 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 1685 gagcctcctcctcctccccc 1666
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 agcacatggaggaggccaag 247 |||||||||||||||||||| Sbjct: 21157 agcacatggaggaggccaag 21176
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 14166 ctcctcctcctcccccggcg 14147
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tccggcggcgcccggcggcg 107 |||||||||||||||||||| Sbjct: 24049 tccggcggcgcccggcggcg 24030
>ref|XM_709319.1| Candida albicans SC5314 hypothetical protein (CaO19.1767), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgacgaca 353 ||||||||||||||| |||||||| Sbjct: 688 aagaagaagaagacaacgacgaca 711
>ref|XM_709279.1| Candida albicans SC5314 hypothetical protein (CaO19.9336), mRNA Length = 1842 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgacgaca 353 ||||||||||||||| |||||||| Sbjct: 688 aagaagaagaagacaacgacgaca 711
>gb|AC111090.20| Mus musculus chromosome 5, clone RP23-161K8, complete sequence Length = 204356 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 gagaaattccaggagatccagggc 271 |||||||||||||| ||||||||| Sbjct: 174470 gagaaattccaggatatccagggc 174493
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ggcggcgcccggcggcggcg 110 |||||||||||||||||||| Sbjct: 4620 ggcggcgcccggcggcggcg 4601
>gb|AC138791.3| Mus musculus BAC clone RP23-222G6 from chromosome 7, complete sequence Length = 203288 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 aattccaggagatccagggc 271 |||||||||||||||||||| Sbjct: 75423 aattccaggagatccagggc 75442
>gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete sequence Length = 195266 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgactcgggattttgcaatg 497 |||||||||||||||||||| Sbjct: 49567 tgactcgggattttgcaatg 49586
>ref|XM_845915.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 2 (LOC476548), mRNA Length = 9527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5360 gagcctcctcctcctccccc 5341
>ref|XM_857764.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 7 (LOC476548), mRNA Length = 9524 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5357 gagcctcctcctcctccccc 5338
>ref|XM_857741.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 6 (LOC476548), mRNA Length = 9482 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5315 gagcctcctcctcctccccc 5296
>ref|XM_857716.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 5 (LOC476548), mRNA Length = 9455 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5288 gagcctcctcctcctccccc 5269
>ref|XM_857689.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 4 (LOC476548), mRNA Length = 8913 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5450 gagcctcctcctcctccccc 5431
>ref|XM_533754.2| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 1 (LOC476548), mRNA Length = 8799 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5336 gagcctcctcctcctccccc 5317
>ref|XM_857641.1| PREDICTED: Canis familiaris similar to Inositol 1,4,5-trisphosphate receptor type 1 (Type 1 inositol 1,4,5-trisphosphate receptor) (Type 1 InsP3 receptor) (IP3 receptor isoform 1) (InsP3R1) (IP3R), transcript variant 3 (LOC476548), mRNA Length = 9577 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 5410 gagcctcctcctcctccccc 5391
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete sequence Length = 145012 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 aagaagaagaagacagcgacgaca 353 |||||||||||||| ||||||||| Sbjct: 49418 aagaagaagaagacggcgacgaca 49395
>gb|U39742.3| Caenorhabditis elegans cosmid C25F6, complete sequence Length = 44304 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ggagcctcctcctcctcccc 32 |||||||||||||||||||| Sbjct: 35519 ggagcctcctcctcctcccc 35538
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aattccaggagatccagggc 271 |||||||||||||||||||| Sbjct: 32549 aattccaggagatccagggc 32530
>emb|BX120009.10| Human DNA sequence from clone DASS-227B13 on chromosome 6, complete sequence Length = 64380 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 57370 gagcctcctcctcctccccc 57351
>emb|AL845446.7| Human DNA sequence from clone DAQB-79P13 on chromosome 6 Contains the 3' end of the HLA-DPB1 gene for the major histocompatibility complex, class II, DP beta 1, the HLA-DPA2 pseudogene for major histocompatibility complex, class II, DP alpha 2, the COL11A2P pseudogene for collagen, type X1, alpha 2, the HLA-DPB2 pseudogene for the major histocompatibility complex, class II, DP beta 2, the DAQB-79P13.6 gene for a novel transcript that shares 2 exons with HLA-DPB2, the HLA-DPA3 pseudogene for the major histocompatibility complex, class II, DP alpha 2, HCG24 gene for HLA complex group 24, the 3' end of the COL11A2 gene for collagen type XI alpha 2 and 1 CpG island, complete sequence Length = 93842 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 45704 gagcctcctcctcctccccc 45685
>emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chromosome 6 contains the HLA-DPA1 gene for major histocompatibility complex, class II, DP alpha 1, the HLA-DPB1 gene for major histocompatibility complex, class II, DP beta 1, a ribosomal protein L32 (RPL32) pseudogene, the HLA-DPA2 pseudogene for major histocompatibility complex, class II, DP alpha 2, a pseudogene similar to part of collagens, a novel protein similar to major histocompatibility complex, class II, DP beta 2 (pseudogene), a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the 5' end of the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8 and four CpG islands, complete sequence Length = 187964 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 107028 gagcctcctcctcctccccc 107009
>emb|AL645940.4| Human DNA sequence from clone XXbac-157A10 on chromosome 6 contains the 3' end of the gene for a novel protein similar to major histocompatibility complex, class II, DP beta 2 pseudogene, a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the FABGL gene for hydroxysteroid (17-beta) dehydrogenase 8, the RING1 gene for ring finger protein 1, a zinger finger protein pseudogene, a HIV TAT specific factor 1 (HTATSF1) pseudogene, a novel transcript, the SACM2L gene for SAC2 suppressor of actin mutations 2-like (yeast), the 5' end of the RPS18 gene for ribosomal protein S18 and six CpG islands, complete sequence Length = 158033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 10159 gagcctcctcctcctccccc 10140
>emb|AL596223.3| Human DNA sequence from clone RP11-227H15 on chromosome 10 Contains 3' end of the VPS26 gene for vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930), the SUPV3L1 gene for suppressor of var1, 3-like 1 (S. cerevisiae)(SUV3), the gene for a novel hexokinase domain containing protein (FLJ37767), the 5' end of the HK1 gene for hexokinase 1 (HKI, HXK1), two novel genes, a ribosomal protein S15a (RPS15A) pseudogene and two CpG islands, complete sequence Length = 180548 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 149951 cctcctcctcctcccccggc 149932
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gcccggcggcggcgacctgt 116 |||||||||||||||||||| Sbjct: 2348964 gcccggcggcggcgacctgt 2348945
>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a ribosomal protein S16 (RPS16) pseudogene, a peptidylprolyl isomerase A (cyclophilin A) (PPIA) pseudogene and a CpG island, complete sequence Length = 199601 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ggccagcgaggcaggagagc 430 |||||||||||||||||||| Sbjct: 122604 ggccagcgaggcaggagagc 122623
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 gccggcgacgcgcgcggcat 66 |||||||||||||||||||| Sbjct: 4202161 gccggcgacgcgcgcggcat 4202180
>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3, complete sequence Length = 94749 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 agctgcagcagctgtttgtg 457 |||||||||||||||||||| Sbjct: 75189 agctgcagcagctgtttgtg 75208
>emb|AL031228.1|HS1033B10 Human DNA sequence from clone RP5-1033B10 on chromosome 6p21.2-21.31 Contains the 3' end of the C6ORF11 gene for chromosome 6 open reading frame 11 (BING4), the B3GALT4 gene for UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase polypeptide 4 (GalT4,Gal-T2,beta3GALT4,beta3Gal-T4), the RPS18 gene for 40S ribosomal protein S18 (KE3,HKE3,KE-3), the SACM2L gene for SAC2 suppressor of actin mutations 2-like (yeast)(ARE1,SAC2,ARE-1,RP5-1033B10), a pseudogene similar to part of HTATSF1 (HIV TAT specific factor 1), the RING1 gene for ring finger protein 1 (RNF1), the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8 (KE6,FABG,HKE6,FABGL,RING2,H2-KE6,D6S2245E), the HKE4 gene for HLA class II region protein KE4 (KE4,RING5,H2-KE4,D6S115E,D6S2244E), the RXRB gene for retinoid X receptor beta (NR2B2,RCoR-1,H-2RIIBP), the COL11A2 gene for collagen type XI alpha 2 (HKE5,PARP,STL3,DFNA13), an HLA class II histocompatability antigen D or S beta pseudogene,the gene for a novel protein similar to major histocompatibility complex class II DP beta 1 precursor, three novel genes and seven CpG islands, complete sequence Length = 175737 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 161106 gagcctcctcctcctccccc 161125
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tccggcggcgcccggcggcg 107 |||||||||||||||||||| Sbjct: 3854267 tccggcggcgcccggcggcg 3854248
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cctccccttcctcgccgcca 571 |||||||||||||||||||| Sbjct: 33345 cctccccttcctcgccgcca 33326
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctccaccac 581 |||||||||||||||| ||||||| Sbjct: 69818 cttcctcgccgccatcgccaccac 69795
>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome 5 of Podospora anserina Length = 156244 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 20534 cctcctcctcctcccccggc 20515
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gcctcctcctcctcccccgg 35 |||||||||||||||||||| Sbjct: 80478 gcctcctcctcctcccccgg 80459
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ctgtacgccgtgctggggct 132 |||||||||||||||||||| Sbjct: 1291355 ctgtacgccgtgctggggct 1291336
>emb|CR847849.5| Human DNA sequence from clone DAMA-245O6 on chromosome 6, complete sequence Length = 88163 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 69557 gagcctcctcctcctccccc 69538
>gb|AC148760.17| Gasterosteus aculeatus clone uogacrs-1c9-1, complete sequence Length = 33368 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 27784 cctcctcctcctcccccggc 27765
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gccgcctaccggaagctcgccatg 187 ||||||||||||| |||||||||| Sbjct: 100756 gccgcctaccggaggctcgccatg 100733
>dbj|AB252990.1| Tricholoma matsutake DNA, microsatellite marker Trma13 Length = 961 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 gagatggcccatatgatgag 402 |||||||||||||||||||| Sbjct: 711 gagatggcccatatgatgag 730
>gb|AE005676.1| Caulobacter crescentus CB15 section 2 of 359 of the complete genome Length = 10672 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcctattcggtcctctccga 291 |||||||||||||||||||| Sbjct: 262 gcctattcggtcctctccga 281
>gb|DQ429012.1| Sorghum propinquum locus pSB0243 genomic sequence Length = 453 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 145 gacggggatccggcggcgcc 164
>gb|DQ429011.1| Sorghum bicolor voucher PI585454 locus pSB0243 genomic sequence Length = 527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 148 gacggggatccggcggcgcc 167
>gb|DQ429010.1| Sorghum bicolor voucher PI267539 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429009.1| Sorghum bicolor voucher PI267408 locus pSB0243 genomic sequence Length = 527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 148 gacggggatccggcggcgcc 167
>gb|DQ429008.1| Sorghum bicolor voucher PI221607 locus pSB0243 genomic sequence Length = 529 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429007.1| Sorghum bicolor voucher PI152702 locus pSB0243 genomic sequence Length = 529 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429006.1| Sorghum bicolor voucher NSL92371 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429005.1| Sorghum bicolor voucher NSL87902 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429004.1| Sorghum bicolor voucher NSL87666 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429003.1| Sorghum bicolor voucher NSL77217 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429002.1| Sorghum bicolor voucher NSL77034 locus pSB0243 genomic sequence Length = 527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 148 gacggggatccggcggcgcc 167
>gb|DQ429001.1| Sorghum bicolor voucher NSL56174 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ429000.1| Sorghum bicolor voucher NSL56003 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ428999.1| Sorghum bicolor voucher NSL55243 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ428998.1| Sorghum bicolor voucher NSL51365 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ428997.1| Sorghum bicolor voucher NSL51030 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>gb|DQ428996.1| Sorghum bicolor voucher NSL50875 locus pSB0243 genomic sequence Length = 527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 148 gacggggatccggcggcgcc 167
>gb|DQ428995.1| Sorghum bicolor voucher BTx623 locus pSB0243 genomic sequence Length = 528 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gacggggatccggcggcgcc 99 |||||||||||||||||||| Sbjct: 149 gacggggatccggcggcgcc 168
>ref|NM_080147.2| Drosophila melanogaster without children CG5965-RA (woc), mRNA Length = 6099 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 1709 gagcctcctcctcctccccc 1690
>gb|AC066614.8| Homo sapiens chromosome 15 clone RP11-80G8 map 15q21.3, complete sequence Length = 176626 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ggagcctcctcctcctcccc 32 |||||||||||||||||||| Sbjct: 85269 ggagcctcctcctcctcccc 85250
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 26408 ctcctcctcctcccccggcg 26389
>gb|AY029175.1| Cavia porcellus F-box protein OCP1 (OCP1) mRNA, complete cds Length = 1180 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 182 cctcctcctcctcccccggc 163
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gcgacgcgcgcggcatggcc 70 |||||||||||||||||||| Sbjct: 2241104 gcgacgcgcgcggcatggcc 2241123
>gb|AY058710.1| Drosophila melanogaster LD44304 full length cDNA Length = 4457 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 52 gagcctcctcctcctccccc 33
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 tgactcgggattttgcaatg 497 |||||||||||||||||||| Sbjct: 1184975 tgactcgggattttgcaatg 1184994
>dbj|AK029597.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930408L20 product:unclassifiable, full insert sequence Length = 2790 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aattccaggagatccagggc 271 |||||||||||||||||||| Sbjct: 245 aattccaggagatccagggc 226
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 cgcgcggcatggccaccggcggcg 80 ||||||||||||| |||||||||| Sbjct: 3118424 cgcgcggcatggcgaccggcggcg 3118401
>gb|AF016349.2|H006101S06 Homo sapiens hexokinase I (HK1) gene, exon 1R and exon 1, alternatively spliced Length = 4400 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 3906 cctcctcctcctcccccggc 3887
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 cagctgtttgtggacatgttccag 469 |||||||||||||||| ||||||| Sbjct: 1785451 cagctgtttgtggacaagttccag 1785474
>gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex BAC MMU404O15, complete sequence Length = 157177 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 75697 gagcctcctcctcctccccc 75678
>gb|M55224.1|CCRDNAK Caulobacter crescentus heat shock protein (dnaK) gene, complete cds; and heat shock protein (dnaJ) gene, partial cds Length = 3051 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcctattcggtcctctccga 291 |||||||||||||||||||| Sbjct: 2632 gcctattcggtcctctccga 2651
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 17905633 ctcctcctcctcccccggcg 17905652 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gcctcctcctcctcccccgg 35 |||||||||||||||||||| Sbjct: 16735961 gcctcctcctcctcccccgg 16735942
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Minus Query: 148 cgacgccgacctcaaggccgcctaccggaagctcgccatgaggtggca 195 ||||| |||||||||| || ||||| ||||||||||||| |||||| Sbjct: 27754073 cgacgacgacctcaagaaggcgtaccgcaagctcgccatgaagtggca 27754026 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 27418036 ctcctcctcctcccccggcg 27418017 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ggcggcgcccggcggcggcg 110 |||||||||||||||||||| Sbjct: 24817735 ggcggcgcccggcggcggcg 24817716
>gb|AC009848.9|AC009848 Drosophila melanogaster, chromosome 3R, region 97E-98A, BAC clone BACR02B05, complete sequence Length = 189694 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 75784 gagcctcctcctcctccccc 75803
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctcca 577 |||||||||||||||||||| Sbjct: 162605 cttcctcgccgccatctcca 162586
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctcca 577 |||||||||||||||||||| Sbjct: 16809 cttcctcgccgccatctcca 16790
>gb|AE004620.1| Pseudomonas aeruginosa PAO1, section 181 of 529 of the complete genome Length = 10370 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 cgacgcgcgcggcatggcca 71 |||||||||||||||||||| Sbjct: 7701 cgacgcgcgcggcatggcca 7682
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 114415 cccttcctcgccgccttctccacc 114438
>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0009H02 Length = 155388 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 55145 cccttcctcgccgccttctccacc 55168
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acctccccttcctcgccgcc 570 |||||||||||||||||||| Sbjct: 33172 acctccccttcctcgccgcc 33153
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacctcaaggccgcctacc 173 |||||||||||||||||||| Sbjct: 3627576 cgacctcaaggccgcctacc 3627595
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1111C09 Length = 156393 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gcggcgcccggcggcggcga 111 |||||||||||||||||||| Sbjct: 118408 gcggcgcccggcggcggcga 118427
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 563 tcgccgccatctccaccacctccg 586 ||||||||| |||||||||||||| Sbjct: 104997 tcgccgccacctccaccacctccg 104974
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acctccccttcctcgccgcc 570 |||||||||||||||||||| Sbjct: 108372 acctccccttcctcgccgcc 108353
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08 Length = 152824 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 85716 cccttcctcgccgccttctccacc 85739 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 85477 cccttcctcgccgccttctccacc 85500
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 3355 cccttcctcgccgccttctccacc 3332
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 151985 cccttcctcgccgccttctccacc 151962
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 cccttcctcgccgccatctccacc 579 ||||||||||||||| |||||||| Sbjct: 14360 cccttcctcgccgccttctccacc 14383
>ref|XM_319393.2| Anopheles gambiae str. PEST ENSANGP00000006189 (ENSANGG00000004716), partial mRNA Length = 1212 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 agcgacgacagcatgcaggg 363 |||||||||||||||||||| Sbjct: 1183 agcgacgacagcatgcaggg 1202
>dbj|AK105282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D03, full insert sequence Length = 1578 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 552 cctccccttcctcgccgcca 571 |||||||||||||||||||| Sbjct: 457 cctccccttcctcgccgcca 438
>dbj|AK104004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-C04, full insert sequence Length = 1190 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctccaccac 581 |||||||||||||||| ||||||| Sbjct: 284 cttcctcgccgccatcgccaccac 261
>dbj|AK101871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070F06, full insert sequence Length = 3349 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 acctccccttcctcgccgcc 570 |||||||||||||||||||| Sbjct: 227 acctccccttcctcgccgcc 208
>dbj|AK073871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075F07, full insert sequence Length = 2028 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctccaccac 581 |||||||||||||||| ||||||| Sbjct: 285 cttcctcgccgccatcgccaccac 262
>ref|NM_212417.1| Eremothecium gossypii AFR733Wp (AFR733W), mRNA Length = 1392 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 cagctgtttgtggacatgttccag 469 |||||||||||||||| ||||||| Sbjct: 916 cagctgtttgtggacaagttccag 939
>dbj|AK071253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087G24, full insert sequence Length = 1623 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gcctcctcctcctcccccgg 35 |||||||||||||||||||| Sbjct: 162 gcctcctcctcctcccccgg 143
>dbj|AK069230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018F12, full insert sequence Length = 803 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 268 ctcctcctcctcccccggcg 249
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acgccgacctcaaggccgcc 169 |||||||||||||||||||| Sbjct: 1271034 acgccgacctcaaggccgcc 1271015
>dbj|AK067414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101C03, full insert sequence Length = 1455 Score = 40.1 bits (20), Expect = 8.1 Identities = 41/48 (85%) Strand = Plus / Plus Query: 148 cgacgccgacctcaaggccgcctaccggaagctcgccatgaggtggca 195 ||||| |||||||||| || ||||| ||||||||||||| |||||| Sbjct: 212 cgacgacgacctcaagaaggcgtaccgcaagctcgccatgaagtggca 259
>dbj|AK063937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D11, full insert sequence Length = 1188 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 104 ctcctcctcctcccccggcg 123
>dbj|AK061384.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H09, full insert sequence Length = 1232 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctccaccac 581 |||||||||||||||| ||||||| Sbjct: 319 cttcctcgccgccatcgccaccac 296
>gb|AY589206.1| Poa annua clone 2 CDO504 gene, partial sequence Length = 745 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 61 gagcctcctcctcctccccc 80
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 558 cttcctcgccgccatctccaccac 581 |||||||||||||||| ||||||| Sbjct: 43344 cttcctcgccgccatcgccaccac 43321
>gb|AC158127.3| Mus musculus chromosome 19, clone RP23-135N12, complete sequence Length = 217544 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aggagcctcctcctcctccc 31 |||||||||||||||||||| Sbjct: 196253 aggagcctcctcctcctccc 196234
>gb|AC111065.20| Mus musculus chromosome 19, clone RP23-315E4, complete sequence Length = 193977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 aggagcctcctcctcctccc 31 |||||||||||||||||||| Sbjct: 83256 aggagcctcctcctcctccc 83275
>gb|AE003760.3| Drosophila melanogaster chromosome 3R, section 98 of 118 of the complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 22572 gagcctcctcctcctccccc 22591
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ggcggcgcccggcggcggcg 110 |||||||||||||||||||| Sbjct: 144234 ggcggcgcccggcggcggcg 144215
>gb|DQ332585.1| Synthetic construct Saccharomyces cerevisiae clone FLH202938.01X NMD2 gene, complete sequence Length = 3383 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgac 349 |||||||||||||||||||| Sbjct: 2896 aagaagaagaagacagcgac 2915
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacgccgacctcaaggccg 167 |||||||||||||||||||| Sbjct: 2837801 cgacgccgacctcaaggccg 2837782
>emb|CT009497.8| Human DNA sequence from clone DAAP-90E5 on chromosome 6, complete sequence Length = 63203 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 52835 gagcctcctcctcctccccc 52816
>emb|AL772405.11| Mouse DNA sequence from clone RP23-178K16 on chromosome 2, complete sequence Length = 131134 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 102451 cctcctcctcctcccccggc 102432
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ctcctcctcctcccccggcg 37 |||||||||||||||||||| Sbjct: 17914886 ctcctcctcctcccccggcg 17914905 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gcctcctcctcctcccccgg 35 |||||||||||||||||||| Sbjct: 16745001 gcctcctcctcctcccccgg 16744982
>gb|AF029305.1|SEG_HSHKRI2 Homo sapiens hexokinase (HK) gene, isozyme I, partial cds Length = 515 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 231 cctcctcctcctcccccggc 212
>gb|AC174048.1| Homo sapiens chromosome 2 clone WI2-2221J1, complete sequence Length = 39231 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 caggagcctcctcctcctcc 30 |||||||||||||||||||| Sbjct: 21663 caggagcctcctcctcctcc 21682
>gb|U10556.1|YSCH9205 Saccharomyces cerevisiae chromosome VIII cosmid 9205 Length = 39203 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 aagaagaagaagacagcgac 349 |||||||||||||||||||| Sbjct: 13991 aagaagaagaagacagcgac 13972
>gb|AC146978.7| Mus musculus chromosome 7, clone RP24-217F6, complete sequence Length = 152682 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aattccaggagatccagggc 271 |||||||||||||||||||| Sbjct: 75323 aattccaggagatccagggc 75304
>gb|U28158.1|SCU28158 Saccharomyces cerevisiae Ifs1p (IFS1) gene, complete cds Length = 4883 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgac 349 |||||||||||||||||||| Sbjct: 2799 aagaagaagaagacagcgac 2818
>gb|U14974.1|SCU14974 Saccharomyces cerevisiae Nmd2p (NMD2) gene, complete cds Length = 4080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgac 349 |||||||||||||||||||| Sbjct: 3257 aagaagaagaagacagcgac 3276
>gb|U12137.1|SCU12137 Saccharomyces cerevisiae Upf2p (UPF2) gene, complete cds Length = 5015 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgac 349 |||||||||||||||||||| Sbjct: 4076 aagaagaagaagacagcgac 4095
>emb|AL603706.13| Mouse DNA sequence from clone RP23-407I21 on chromosome 11, complete sequence Length = 220242 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgacgaca 353 ||||||||||||||| |||||||| Sbjct: 2743 aagaagaagaagacaacgacgaca 2766
>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete sequence Length = 221399 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 aagaagaagaagacagcgacgaca 353 ||||||||||||||| |||||||| Sbjct: 105445 aagaagaagaagacaacgacgaca 105468
>emb|X54812.1|MMNEORP8R Mouse DNA insertion site for promoterless neoR gene (clone p8R1) Length = 1046 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctcctcctcctcccccggc 36 |||||||||||||||||||| Sbjct: 516 cctcctcctcctcccccggc 535
>emb|AJ276394.1|DME276394 Drosophila melanogaster woc gene, exons 1-11 Length = 8546 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 gagcctcctcctcctccccc 33 |||||||||||||||||||| Sbjct: 3358 gagcctcctcctcctccccc 3339
>gb|J01236.1|BLYAMYAA Barley alpha-amylase type A isozyme mRNA, complete cds Length = 1588 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 atggccaccggcggcgacgg 84 |||||||||||||||||||| Sbjct: 796 atggccaccggcggcgacgg 815
>gb|M17128.1|BLYAMY2 Barley (H.vulgare) alpha-amylase 2 mRNA, complete cds Length = 1588 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 atggccaccggcggcgacgg 84 |||||||||||||||||||| Sbjct: 796 atggccaccggcggcgacgg 815 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,338,786 Number of Sequences: 3902068 Number of extensions: 8338786 Number of successful extensions: 494397 Number of sequences better than 10.0: 214 Number of HSP's better than 10.0 without gapping: 228 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 483752 Number of HSP's gapped (non-prelim): 10605 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
