Clone Name | bart16c06 |
---|---|
Clone Library Name | barley_pub |
>gb|AF418204.1| Hordeum vulgare subsp. vulgare CRT/DRE binding factor 1 (CBF1) mRNA, complete cds Length = 1010 Score = 656 bits (331), Expect = 0.0 Identities = 331/331 (100%) Strand = Plus / Plus Query: 1 aaaccacctgcttccactccctccccctgcttacactccagcagccagcatagccaggca 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaccacctgcttccactccctccccctgcttacactccagcagccagcatagccaggca 60 Query: 61 gccatggacgttggtgccctcagcagcgactactcgtcggggacgccgtccccggtgggc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gccatggacgttggtgccctcagcagcgactactcgtcggggacgccgtccccggtgggc 120 Query: 121 gcggacggcggcaacagtgagggcttctcgacgtacatgacggtgtcttcggctccgccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcggacggcggcaacagtgagggcttctcgacgtacatgacggtgtcttcggctccgccg 180 Query: 181 aagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaagggcgtg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaagggcgtg 240 Query: 241 cgccggaggaaccccgggaggtgggtctgcgaggtgcgggagccgcacagcaagcagagg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cgccggaggaaccccgggaggtgggtctgcgaggtgcgggagccgcacagcaagcagagg 300 Query: 301 atatggctcggcacgttcgagaccgcagaga 331 ||||||||||||||||||||||||||||||| Sbjct: 301 atatggctcggcacgttcgagaccgcagaga 331 Score = 391 bits (197), Expect = e-105 Identities = 197/197 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 Query: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 Query: 564 gtactacgggatggacg 580 ||||||||||||||||| Sbjct: 564 gtactacgggatggacg 580
>gb|AY785839.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF1 (CBF1) gene, complete cds Length = 967 Score = 613 bits (309), Expect = e-172 Identities = 309/309 (100%) Strand = Plus / Plus Query: 23 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 60 Query: 83 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 120 Query: 143 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 180 Query: 203 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 240 Query: 263 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 300 Query: 323 ccgcagaga 331 ||||||||| Sbjct: 301 ccgcagaga 309 Score = 391 bits (197), Expect = e-105 Identities = 197/197 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 421 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 481 Query: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 541 Query: 564 gtactacgggatggacg 580 ||||||||||||||||| Sbjct: 542 gtactacgggatggacg 558
>gb|AY785836.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF1 (CBF1) gene, complete cds Length = 967 Score = 613 bits (309), Expect = e-172 Identities = 309/309 (100%) Strand = Plus / Plus Query: 23 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 60 Query: 83 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 120 Query: 143 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 180 Query: 203 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 240 Query: 263 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 300 Query: 323 ccgcagaga 331 ||||||||| Sbjct: 301 ccgcagaga 309 Score = 391 bits (197), Expect = e-105 Identities = 197/197 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 421 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 481 Query: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 541 Query: 564 gtactacgggatggacg 580 ||||||||||||||||| Sbjct: 542 gtactacgggatggacg 558
>gb|AY785837.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF1 (CBF1) gene, complete cds Length = 967 Score = 613 bits (309), Expect = e-172 Identities = 309/309 (100%) Strand = Plus / Plus Query: 23 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 60 Query: 83 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 120 Query: 143 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 180 Query: 203 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 240 Query: 263 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 300 Query: 323 ccgcagaga 331 ||||||||| Sbjct: 301 ccgcagaga 309 Score = 391 bits (197), Expect = e-105 Identities = 197/197 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 421 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 481 Query: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 541 Query: 564 gtactacgggatggacg 580 ||||||||||||||||| Sbjct: 542 gtactacgggatggacg 558
>gb|AY785838.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF1 (CBF1) gene, complete cds Length = 967 Score = 605 bits (305), Expect = e-170 Identities = 308/309 (99%) Strand = Plus / Plus Query: 23 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ccccctgcttacactccagcagccagcatagccaggcagccatggacgttggtgccctca 60 Query: 83 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcagcgactactcgtcggggacgccgtccccggtgggcgcggacggcggcaacagtgagg 120 Query: 143 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcttctcgacgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggacca 180 Query: 203 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agttcaaggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggt 240 Query: 263 gggtctgcgaggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgaga 322 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 241 gggtctgcgaggtgcgggagccgcacagcaaacagaggatatggctcggcacgttcgaga 300 Query: 323 ccgcagaga 331 ||||||||| Sbjct: 301 ccgcagaga 309 Score = 391 bits (197), Expect = e-105 Identities = 197/197 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 421 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 481 Query: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 541 Query: 564 gtactacgggatggacg 580 ||||||||||||||||| Sbjct: 542 gtactacgggatggacg 558
>gb|AY785907.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF1 (CBF1) mRNA, partial cds Length = 559 Score = 391 bits (197), Expect = e-105 Identities = 197/197 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 172 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 232 Query: 504 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 gagcaatgcgcccgccgaggaggtagccgctgcaccaacgatgcagttcgccggtgatcc 292 Query: 564 gtactacgggatggacg 580 ||||||||||||||||| Sbjct: 293 gtactacgggatggacg 309 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 60
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 250 bits (126), Expect = 4e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 154 tacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggag 213 |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 27671560 tacatgacggtgtcgtcggcgccgcccaagcggcgagcggggcggaccaagttcaaggag 27671619 Query: 214 acgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcgag 273 ||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27671620 acgcggcaccccgtgttcaagggcgtgcgccggaggaaccccgggaggtgggtgtgcgag 27671679 Query: 274 gtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| Sbjct: 27671680 gtgcgcgagccgcacggcaagcagcggatatggctcgggacgttcgagacagcagaga 27671737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 ||||||||||||||||||||| || | || ||||| |||||| || | || || |||| Sbjct: 27671790 ctgcctcaacttcgccgactcgccgaggcgcctccgcgtcccgcccatcggcgcaagcca 27671849 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 || || |||||| ||||||||| |||||||| |||||||||| |||| |||| || | Sbjct: 27671850 cgacgacatacggagggcggcggctgaggcggccgaggcattccggccgccaccagatga 27671909 Query: 504 gagcaatgcgcccgccgaggaggtagccgc 533 |||||||||| || |||||| || |||||| Sbjct: 27671910 gagcaatgcggccaccgaggtggcagccgc 27671939 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 79 ctcagcagcgactactcgtcggggacgccgtccccggtgg 118 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 27671491 ctcagcagcgactactcgtcggggacgccgtcgccggtgg 27671530 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggatatggctcggcacgttcgagac 323 |||||||||| |||||||||||||| Sbjct: 33939193 ggatatggctgggcacgttcgagac 33939169
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 250 bits (126), Expect = 4e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 154 tacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggag 213 |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 151229 tacatgacggtgtcgtcggcgccgcccaagcggcgagcggggcggaccaagttcaaggag 151288 Query: 214 acgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcgag 273 ||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 151289 acgcggcaccccgtgttcaagggcgtgcgccggaggaaccccgggaggtgggtgtgcgag 151348 Query: 274 gtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| Sbjct: 151349 gtgcgcgagccgcacggcaagcagcggatatggctcgggacgttcgagacagcagaga 151406 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 ||||||||||||||||||||| || | || ||||| |||||| || | || || |||| Sbjct: 151459 ctgcctcaacttcgccgactcgccgaggcgcctccgcgtcccgcccatcggcgcaagcca 151518 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 || || |||||| ||||||||| |||||||| |||||||||| |||| |||| || | Sbjct: 151519 cgacgacatacggagggcggcggctgaggcggccgaggcattccggccgccaccagatga 151578 Query: 504 gagcaatgcgcccgccgaggaggtagccgc 533 |||||||||| || |||||| || |||||| Sbjct: 151579 gagcaatgcggccaccgaggtggcagccgc 151608 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 79 ctcagcagcgactactcgtcggggacgccgtccccggtgg 118 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 151160 ctcagcagcgactactcgtcggggacgccgtcgccggtgg 151199
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 250 bits (126), Expect = 4e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 154 tacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggag 213 |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 57426 tacatgacggtgtcgtcggcgccgcccaagcggcgagcggggcggaccaagttcaaggag 57485 Query: 214 acgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcgag 273 ||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 57486 acgcggcaccccgtgttcaagggcgtgcgccggaggaaccccgggaggtgggtgtgcgag 57545 Query: 274 gtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| Sbjct: 57546 gtgcgcgagccgcacggcaagcagcggatatggctcgggacgttcgagacagcagaga 57603 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 ||||||||||||||||||||| || | || ||||| |||||| || | || || |||| Sbjct: 57656 ctgcctcaacttcgccgactcgccgaggcgcctccgcgtcccgcccatcggcgcaagcca 57715 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 || || |||||| ||||||||| |||||||| |||||||||| |||| |||| || | Sbjct: 57716 cgacgacatacggagggcggcggctgaggcggccgaggcattccggccgccaccagatga 57775 Query: 504 gagcaatgcgcccgccgaggaggtagccgc 533 |||||||||| || |||||| || |||||| Sbjct: 57776 gagcaatgcggccaccgaggtggcagccgc 57805 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 79 ctcagcagcgactactcgtcggggacgccgtccccggtgg 118 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 57357 ctcagcagcgactactcgtcggggacgccgtcgccggtgg 57396
>dbj|AK106041.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E01, full insert sequence Length = 1272 Score = 250 bits (126), Expect = 4e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 154 tacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggag 213 |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 133 tacatgacggtgtcgtcggcgccgcccaagcggcgagcggggcggaccaagttcaaggag 192 Query: 214 acgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcgag 273 ||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 193 acgcggcaccccgtgttcaagggcgtgcgccggaggaaccccgggaggtgggtgtgcgag 252 Query: 274 gtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| Sbjct: 253 gtgcgcgagccgcacggcaagcagcggatatggctcgggacgttcgagacagcagaga 310 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 ||||||||||||||||||||| || | || ||||| |||||| || | || || |||| Sbjct: 363 ctgcctcaacttcgccgactcgccgaggcgcctccgcgtcccgcccatcggcgcaagcca 422 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 || || |||||| ||||||||| |||||||| |||||||||| |||| |||| || | Sbjct: 423 cgacgacatacggagggcggcggctgaggcggccgaggcattccggccgccaccagatga 482 Query: 504 gagcaatgcgcccgccgaggaggtagccgc 533 |||||||||| || |||||| || |||||| Sbjct: 483 gagcaatgcggccaccgaggtggcagccgc 512 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 79 ctcagcagcgactactcgtcggggacgccgtccccggtgg 118 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 64 ctcagcagcgactactcgtcggggacgccgtcgccggtgg 103
>dbj|AK060550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H10, full insert sequence Length = 1159 Score = 250 bits (126), Expect = 4e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 154 tacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggag 213 |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct: 133 tacatgacggtgtcgtcggcgccgcccaagcggcgagcggggcggaccaagttcaaggag 192 Query: 214 acgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcgag 273 ||||||||||| || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 193 acgcggcaccccgtgttcaagggcgtgcgccggaggaaccccgggaggtgggtgtgcgag 252 Query: 274 gtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||| Sbjct: 253 gtgcgcgagccgcacggcaagcagcggatatggctcgggacgttcgagacagcagaga 310 Score = 75.8 bits (38), Expect = 1e-10 Identities = 122/150 (81%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactctcctcgtcggctccgggtcccggccgtgggtgccagccc 443 ||||||||||||||||||||| || | || ||||| |||||| || | || || |||| Sbjct: 363 ctgcctcaacttcgccgactcgccgaggcgcctccgcgtcccgcccatcggcgcaagcca 422 Query: 444 tgatgagatacggcgggcggcggtagaggcggctgaggcattcctgccggcacccgacca 503 || || |||||| ||||||||| |||||||| |||||||||| |||| |||| || | Sbjct: 423 cgacgacatacggagggcggcggctgaggcggccgaggcattccggccgccaccagatga 482 Query: 504 gagcaatgcgcccgccgaggaggtagccgc 533 |||||||||| || |||||| || |||||| Sbjct: 483 gagcaatgcggccaccgaggtggcagccgc 512 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 79 ctcagcagcgactactcgtcggggacgccgtccccggtgg 118 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 64 ctcagcagcgactactcgtcggggacgccgtcgccggtgg 103
>gb|AY785896.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1E (DREB1E) gene, complete cds Length = 660 Score = 246 bits (124), Expect = 7e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||| Sbjct: 80 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaagttcaagg 139 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 140 agacgaggcacccggtgtacaagggcgtgcgcagcaggaaccccgggaggtgggtctgcg 199 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 200 aggtgcgcgagccgcacggcaagcagaggatctggctcggcaccttcgagaccgccgaga 259 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 93 ctcgtcggggacgccgtccccggtgggcg 121 |||||||||||||||||| |||||||||| Sbjct: 33 ctcgtcggggacgccgtcgccggtgggcg 61 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 312 ctgcctcaacttcgccgactc 332
>ref|XM_473568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 660 Score = 246 bits (124), Expect = 7e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||| Sbjct: 80 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaagttcaagg 139 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 140 agacgaggcacccggtgtacaagggcgtgcgcagcaggaaccccgggaggtgggtctgcg 199 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 200 aggtgcgcgagccgcacggcaagcagaggatctggctcggcaccttcgagaccgccgaga 259 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 93 ctcgtcggggacgccgtccccggtgggcg 121 |||||||||||||||||| |||||||||| Sbjct: 33 ctcgtcggggacgccgtcgccggtgggcg 61 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 312 ctgcctcaacttcgccgactc 332
>gb|AY258283.1| Oryza sativa (japonica cultivar-group) CR350 transcription factor gene, complete cds Length = 737 Score = 246 bits (124), Expect = 7e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||| Sbjct: 104 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaagttcaagg 163 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 164 agacgaggcacccggtgtacaagggcgtgcgcagcaggaaccccgggaggtgggtctgcg 223 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 224 aggtgcgcgagccgcacggcaagcagaggatctggctcggcaccttcgagaccgccgaga 283 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 93 ctcgtcggggacgccgtccccggtgggcg 121 |||||||||||||||||| |||||||||| Sbjct: 57 ctcgtcggggacgccgtcgccggtgggcg 85 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 336 ctgcctcaacttcgccgactc 356
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 246 bits (124), Expect = 7e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||| Sbjct: 28794206 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaagttcaagg 28794265 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 28794266 agacgaggcacccggtgtacaagggcgtgcgcagcaggaaccccgggaggtgggtctgcg 28794325 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 28794326 aggtgcgcgagccgcacggcaagcagaggatctggctcggcaccttcgagaccgccgaga 28794385 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 93 ctcgtcggggacgccgtccccggtgggcg 121 |||||||||||||||||| |||||||||| Sbjct: 28794159 ctcgtcggggacgccgtcgccggtgggcg 28794187 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 28794438 ctgcctcaacttcgccgactc 28794458 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 cggtgggcgcggacggcggca 133 ||||||||||||||||||||| Sbjct: 17851597 cggtgggcgcggacggcggca 17851577 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 tggctcggcacgttcgagaccgcagaga 331 ||||||||||||||||| ||||| |||| Sbjct: 27496942 tggctcggcacgttcgacaccgccgaga 27496969
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 246 bits (124), Expect = 7e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||| Sbjct: 6268 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaagttcaagg 6327 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6328 agacgaggcacccggtgtacaagggcgtgcgcagcaggaaccccgggaggtgggtctgcg 6387 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 6388 aggtgcgcgagccgcacggcaagcagaggatctggctcggcaccttcgagaccgccgaga 6447 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 93 ctcgtcggggacgccgtccccggtgggcg 121 |||||||||||||||||| |||||||||| Sbjct: 6221 ctcgtcggggacgccgtcgccggtgggcg 6249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 6500 ctgcctcaacttcgccgactc 6520
>gb|AY114110.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF-1-like protein mRNA, complete cds Length = 660 Score = 246 bits (124), Expect = 7e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| ||||||||||||||| Sbjct: 80 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaagttcaagg 139 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 140 agacgaggcacccggtgtacaagggcgtgcgcagcaggaaccccgggaggtgggtctgcg 199 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 200 aggtgcgcgagccgcacggcaagcagaggatctggctcggcaccttcgagaccgccgaga 259 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 93 ctcgtcggggacgccgtccccggtgggcg 121 |||||||||||||||||| |||||||||| Sbjct: 33 ctcgtcggggacgccgtcgccggtgggcg 61 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 312 ctgcctcaacttcgccgactc 332
>gb|AY785893.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF11 (CBF11) mRNA, partial cds Length = 334 Score = 182 bits (92), Expect = 9e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| || ||| |||||||| ||| || Sbjct: 116 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggccgggaggaccaaggtcaggg 175 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| |||||||| |||||| | |||||||||||| |||||||||||| Sbjct: 176 agacgaggcacccggtgtacaagggggtgcgcagcaggaaccccgggcggtgggtctgcg 235 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| |||||||| | ||||||||| ||||||||||||| ||||| ||||| |||| Sbjct: 236 aggtgcgcgagccgcaagggaagcagaggctatggctcggcaccttcgacaccgccgaga 295
>gb|AY785892.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF11 (CBF11) gene, complete cds Length = 778 Score = 182 bits (92), Expect = 9e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| || ||| |||||||| ||| || Sbjct: 90 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggccgggaggaccaaggtcaggg 149 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| |||||||| |||||| | |||||||||||| |||||||||||| Sbjct: 150 agacgaggcacccggtgtacaagggggtgcgcagcaggaaccccgggcggtgggtctgcg 209 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| |||||||| | ||||||||| ||||||||||||| ||||| ||||| |||| Sbjct: 210 aggtgcgcgagccgcaagggaagcagaggctatggctcggcaccttcgacaccgccgaga 269
>gb|AY785891.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF11 (CBF11) gene, complete cds Length = 749 Score = 182 bits (92), Expect = 9e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| || ||| |||||||| ||| || Sbjct: 90 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggccgggaggaccaaggtcaggg 149 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| |||||||| |||||| | |||||||||||| |||||||||||| Sbjct: 150 agacgaggcacccggtgtacaagggggtgcgcagcaggaaccccgggcggtgggtctgcg 209 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| |||||||| | ||||||||| ||||||||||||| ||||| ||||| |||| Sbjct: 210 aggtgcgcgagccgcaagggaagcagaggctatggctcggcaccttcgacaccgccgaga 269
>gb|AY785889.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF11 (CBF11) gene, complete cds Length = 749 Score = 182 bits (92), Expect = 9e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| || ||| |||||||| ||| || Sbjct: 90 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggccgggaggaccaaggtcaggg 149 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| |||||||| |||||| | |||||||||||| |||||||||||| Sbjct: 150 agacgaggcacccggtgtacaagggggtgcgcagcaggaaccccgggcggtgggtctgcg 209 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| |||||||| | ||||||||| ||||||||||||| ||||| ||||| |||| Sbjct: 210 aggtgcgcgagccgcaagggaagcagaggctatggctcggcaccttcgacaccgccgaga 269
>gb|AY785890.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF11 (CBF11) gene, complete cds Length = 749 Score = 182 bits (92), Expect = 9e-43 Identities = 158/180 (87%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| || ||| |||||||| ||| || Sbjct: 90 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggccgggaggaccaaggtcaggg 149 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| |||||||| |||||| | |||||||||||| |||||||||||| Sbjct: 150 agacgaggcacccggtgtacaagggggtgcgcagcaggaaccccgggcggtgggtctgcg 209 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| |||||||| | ||||||||| ||||||||||||| ||||| ||||| |||| Sbjct: 210 aggtgcgcgagccgcaagggaagcagaggctatggctcggcaccttcgacaccgccgaga 269
>gb|AY785906.1| Triticum aestivum cultivar Chinese Spring TaCBF11 (CBF11) mRNA, complete cds Length = 895 Score = 174 bits (88), Expect = 2e-40 Identities = 157/180 (87%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||||||||||||| ||||| ||||| |||||||| |||||| |||||||| ||| || Sbjct: 111 cgtacatgacggtgtcgtcggcgccgcccaagcggcgggcggggaggaccaaggtcaggg 170 Query: 212 agacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctgcg 271 ||||| |||||||||| |||||||| |||||| | ||||||||||| |||||||||||| Sbjct: 171 agacgaggcacccggtgtacaagggggtgcgcagcaggaaccccggccggtgggtctgcg 230 Query: 272 aggtgcgggagccgcacagcaagcagaggatatggctcggcacgttcgagaccgcagaga 331 ||||||| ||||||||| | |||||| || | ||||||||||| ||||| ||||| |||| Sbjct: 231 aggtgcgcgagccgcacgggaagcagcggctgtggctcggcaccttcgacaccgccgaga 290
>gb|AY785858.1| Hordeum vulgare subsp. vulgare cultivar Optic HvCBF5 (CBF5) mRNA, complete cds Length = 1285 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct: 120 gacggtgacgtcggcgccgcccaagcggccggcggggcggaccaagttcagggagacgcg 179 Query: 219 gcacccggtctacaagggcgtgcg 242 ||||||||| ||| ||||||||| Sbjct: 180 gcacccggtgtaccggggcgtgcg 203 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 348 ctgcctcaacttcgccgactc 368
>gb|AY785855.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF5 (CBF5) gene, complete cds Length = 772 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct: 93 gacggtgacgtcggcgccgcccaagcggccggcggggcggaccaagttcagggagacgcg 152 Query: 219 gcacccggtctacaagggcgtgcg 242 ||||||||| ||| ||||||||| Sbjct: 153 gcacccggtgtaccggggcgtgcg 176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 321 ctgcctcaacttcgccgactc 341
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 81.8 bits (41), Expect = 2e-12 Identities = 91/107 (85%), Gaps = 3/107 (2%) Strand = Plus / Minus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaag 234 ||||||||||||| ||||||||||||||||||| |||||||||| |||||| | ||| Sbjct: 35312 ccgccgaagcggcccgcggggcggaccaagttccaggagacgcgccacccgctgtaccgc 35253 Query: 235 ggcgtgcgc---cggaggaaccccgggaggtgggtctgcgaggtgcg 278 ||||||||| ||| || | ||||| ||||||||||||||||||| Sbjct: 35252 ggcgtgcgccagcgggggcccgccgggcggtgggtctgcgaggtgcg 35206 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 53320 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 53261 Query: 219 gcacccg 225 |||||| Sbjct: 53260 ccacccg 53254 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||| ||||||||||| | ||||||||| |||||||||||||||||||| |||||||| Sbjct: 91156 cggcgccgccgaagcgccccgcggggcgcaccaagttcaaggagacgcgccacccggt 91099 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaag 234 |||||||||||||| |||||||||| |||||| |||||||||| |||||||| ||| Sbjct: 22206 ccgccgaagcggcgggcggggcggaacaagttgcaggagacgcgccacccggtgtaccgc 22265 Query: 235 ggcgtgcgccg 245 ||||||||||| Sbjct: 22266 ggcgtgcgccg 22276 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 53089 ctgcctcaacttcgccgactc 53069 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 35097 ctgcctcaacttcgccgactc 35077 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 22437 tgcctcaacttcgccgactc 22456
>gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, complete cds Length = 850 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 154 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 213 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| ||||||||||||| Sbjct: 214 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtgcggg 267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 392 ctgcctcaacttcgccgactc 412
>gb|AY785857.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF5 (CBF5) gene, complete cds Length = 772 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct: 93 gacggtgacgtcggcgccgcccaagcggccggcggggcggaccaagttcagggagacgcg 152 Query: 219 gcacccggtctacaagggcgtgcg 242 ||||||| | ||| ||||||||| Sbjct: 153 gcacccgctgtaccggggcgtgcg 176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 321 ctgcctcaacttcgccgactc 341
>gb|AY785856.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF5 (CBF5) gene, complete cds Length = 772 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct: 93 gacggtgacgtcggcgccgcccaagcggccggcggggcggaccaagttcagggagacgcg 152 Query: 219 gcacccggtctacaagggcgtgcg 242 ||||||| | ||| ||||||||| Sbjct: 153 gcacccgctgtaccggggcgtgcg 176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 321 ctgcctcaacttcgccgactc 341
>gb|AY785854.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF5 (CBF5) gene, complete cds Length = 773 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||| ||||||| ||||||||||||||||||| ||||||||| Sbjct: 93 gacggtgacgtcggcgccgcccaagcggccggcggggcggaccaagttcagggagacgcg 152 Query: 219 gcacccggtctacaagggcgtgcg 242 ||||||| | ||| ||||||||| Sbjct: 153 gcacccgctgtaccggggcgtgcg 176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 321 ctgcctcaacttcgccgactc 341
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 20103669 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 20103610 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| ||||||||||||| Sbjct: 20103609 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtgcggg 20103556 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 180 gaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 20099616 gaagcggcccgcggggcgcaccaagttcagggagacgcggcacccggt 20099569 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||| |||||||| |||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 20095648 cgtacaggacggtgtggtcggagccgccgaagaggccggcgggaaggaccaagttcaggg 20095589 Query: 212 agacgcggcacccggt 227 ||||| |||||||||| Sbjct: 20095588 agacgaggcacccggt 20095573 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 20103431 ctgcctcaacttcgccgactc 20103411 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gggaggtgggtctgcgaggtgcggg 280 ||||||||||| ||||||||||||| Sbjct: 20095529 gggaggtgggtgtgcgaggtgcggg 20095505 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 20095398 ctgcctcaacttcgccgactc 20095378
>gb|AF300970.1| Oryza sativa DRE-binding protein 1A mRNA, complete cds Length = 895 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 158 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 217 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| ||||||||||||| Sbjct: 218 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtgcggg 271 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 396 ctgcctcaacttcgccgactc 416
>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa273B05 Length = 41326 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Minus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 38595 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 38536 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| ||||||||||||| Sbjct: 38535 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtgcggg 38482 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 180 gaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 34542 gaagcggcccgcggggcgcaccaagttcagggagacgcggcacccggt 34495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||| |||||||| |||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 30574 cgtacaggacggtgtggtcggagccgccgaagaggccggcgggaaggaccaagttcaggg 30515 Query: 212 agacgcggcacccggt 227 ||||| |||||||||| Sbjct: 30514 agacgaggcacccggt 30499 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 38357 ctgcctcaacttcgccgactc 38337 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 gggaggtgggtctgcgaggtgcggg 280 ||||||||||| ||||||||||||| Sbjct: 30455 gggaggtgggtgtgcgaggtgcggg 30431 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 30324 ctgcctcaacttcgccgactc 30304
>dbj|AK105599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A04, full insert sequence Length = 955 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 206 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 265 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| ||||||||||||| Sbjct: 266 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtgcggg 319 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 444 ctgcctcaacttcgccgactc 464
>dbj|AK071519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L23, full insert sequence Length = 909 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/114 (84%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 172 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 231 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| ||||||||||||| Sbjct: 232 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtgcggg 285 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 410 ctgcctcaacttcgccgactc 430
>gb|AY785905.1| Triticum aestivum cultivar Thatcher Lr1 TaCBF9 (CBF9) mRNA, complete cds Length = 1073 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 140 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 199 Query: 219 gcacccg 225 |||||| Sbjct: 200 ccacccg 206 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 371 ctgcctcaacttcgccgactc 391
>gb|AY785903.1| Triticum aestivum cultivar TAM W-101 TaCBF6 (CBF6) mRNA, complete cds Length = 1063 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 301 tcggcgccggcgaagcggccggcggggcggaccaagttcagggagacgcggcacccggt 359 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 525 ctgcctcaacttcgccgactc 545
>gb|AY785851.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF4 (CBF4) gene, complete cds Length = 873 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 124 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 183 Query: 219 gcacccg 225 |||||| Sbjct: 184 ccacccg 190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 355 ctgcctcaacttcgccgactc 375
>gb|AY785853.1| Hordeum vulgare subsp. vulgare cultivar CI16151 (Mla6) HvCBF4B (CBF4B) mRNA, complete cds Length = 924 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 142 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 201 Query: 219 gcacccg 225 |||||| Sbjct: 202 ccacccg 208 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 373 ctgcctcaacttcgccgactc 393
>gb|AY785848.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF4B (CBF4B) mRNA, complete cds Length = 888 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 140 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 199 Query: 219 gcacccg 225 |||||| Sbjct: 200 ccacccg 206 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 371 ctgcctcaacttcgccgactc 391
>gb|AY785850.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF4B (CBF4B) mRNA, complete cds Length = 892 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 147 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 206 Query: 219 gcacccg 225 |||||| Sbjct: 207 ccacccg 213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 378 ctgcctcaacttcgccgactc 398
>gb|AY785849.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF4A (CBF4A) mRNA, complete cds Length = 967 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 129 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 188 Query: 219 gcacccg 225 |||||| Sbjct: 189 ccacccg 195 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 360 ctgcctcaacttcgccgactc 380
>gb|AF298230.1| Hordeum vulgare CBF1-like protein BCBF1 (BCBF1) mRNA, complete cds Length = 915 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 143 gacggtgtcgtcggagccgccgaagcggcccgcggggcggaccaagttccacgagacgcg 202 Query: 219 gcacccg 225 |||||| Sbjct: 203 ccacccg 209 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 374 ctgcctcaacttcgccgactc 394
>gb|AY960831.1| Lolium perenne C-repeat/DRE-binding factor 3 (CBF3) mRNA, complete cds Length = 942 Score = 77.8 bits (39), Expect = 4e-11 Identities = 89/105 (84%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaagggcg 238 ||||||||| |||||||||||| ||||||| |||||||||||||||||| ||| |||| Sbjct: 213 cgaagcggcccgcggggcggacaaagttcagggagacgcggcacccggtgtaccgcggcg 272 Query: 239 tgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 |||| || ||| || ||||| ||||||| ||||||||||||| Sbjct: 273 tgcggcgcaggggcaatgccgggcggtgggtgtgcgaggtgcggg 317 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 425 tgcctcaacttcgccgactc 444
>gb|DQ151544.1| Hordeum vulgare subsp. vulgare cultivar Morex CBF12 (CBF12) gene, complete cds Length = 735 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaagg 235 |||||||||| | ||||||||| |||||||||||||||||||| |||||||| | | | | Sbjct: 92 cgccgaagcgccccgcggggcgcaccaagttcaaggagacgcgccacccggtgttccacg 151 Query: 236 gcgtgcgccg 245 |||||||||| Sbjct: 152 gcgtgcgccg 161
>gb|DQ095157.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF12 (CBF12) gene, complete cds Length = 735 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaagg 235 |||||||||| | ||||||||| |||||||||||||||||||| |||||||| | | | | Sbjct: 92 cgccgaagcgccccgcggggcgcaccaagttcaaggagacgcgccacccggtgttccacg 151 Query: 236 gcgtgcgccg 245 |||||||||| Sbjct: 152 gcgtgcgccg 161
>gb|AY951947.1| Triticum monococcum CRT/DRE binding factor 5 (CBF5) gene, complete cds Length = 2148 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtc 228 ||||| ||||||||||||| |||||||||||||||||| ||||||||| |||||||| Sbjct: 992 tcggcgccgccgaagcggccggcggggcggaccaagttccgggagacgcgccacccggtg 1051 Query: 229 tacaagggcgtgcgccgg 246 ||| |||||||||||| Sbjct: 1052 taccgcggcgtgcgccgg 1069 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 1210 ctgcctcaacttcgccgactc 1230
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaagg 235 |||||||||| | ||||||||| |||||||||||||||||||| |||||||| | | | | Sbjct: 88875 cgccgaagcgccccgcggggcgaaccaagttcaaggagacgcgccacccggtgttccacg 88816 Query: 236 gcgtgcgccg 245 |||||||||| Sbjct: 88815 gcgtgcgccg 88806 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||||||||||||||||||||||| Sbjct: 39222 gggcgcaccaagttcaaggagacgcggcacccggt 39256 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 178 ccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||| | ||| ||||| |||||||||||||||||||| |||||||| Sbjct: 181731 ccgaagcgccccgccgggcgcaccaagttcaaggagacgcgccacccggt 181780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 160 acggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcgg 219 ||||||| |||| |||||||||||| | |||||||| |||||| ||||||||||||| Sbjct: 92204 acggtgtggtcggatccgccgaagcgaccggcggggcgcaccaagctcaaggagacgcgc 92145 Query: 220 cacccggt 227 ||||||| Sbjct: 92144 tacccggt 92137 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| |||||||||||||||||||| |||||||| Sbjct: 96120 gggcgcaccaagttcaaggagacgcgccacccggt 96086
>ref|NM_185471.1| Oryza sativa (japonica cultivar-group), mRNA Length = 645 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||| | Sbjct: 30 gacggtgacgtcggcgccgccgaagcggccggcggggaggaccaagttcagggagacgag 89 Query: 219 gcacccggt 227 ||||||||| Sbjct: 90 gcacccggt 98 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 259 tgcctcaacttcgccgactc 278
>gb|AY327040.1| Oryza sativa (japonica cultivar-group) transcription factor CBF1 mRNA, complete cds Length = 772 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||| | Sbjct: 57 gacggtgacgtcggcgccgccgaagcggccggcggggaggaccaagttcagggagacgag 116 Query: 219 gcacccggt 227 ||||||||| Sbjct: 117 gcacccggt 125 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 286 tgcctcaacttcgccgactc 305
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||| | Sbjct: 1433827 gacggtgacgtcggcgccgccgaagcggccggcggggaggaccaagttcagggagacgag 1433886 Query: 219 gcacccggt 227 ||||||||| Sbjct: 1433887 gcacccggt 1433895 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 3309999 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 3310046 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 3310215 gcctcaacttcgccgactct 3310234 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 1434056 tgcctcaacttcgccgactc 1434075
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||| | Sbjct: 41113 gacggtgacgtcggcgccgccgaagcggccggcggggaggaccaagttcagggagacgag 41172 Query: 219 gcacccggt 227 ||||||||| Sbjct: 41173 gcacccggt 41181 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 41342 tgcctcaacttcgccgactc 41361
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||||||||||| |||||| |||||||||||| ||||||| | Sbjct: 142366 gacggtgacgtcggcgccgccgaagcggccggcggggaggaccaagttcagggagacgag 142425 Query: 219 gcacccggt 227 ||||||||| Sbjct: 142426 gcacccggt 142434 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 142595 tgcctcaacttcgccgactc 142614
>emb|AM071407.1| Avena sativa mRNA for CBF-like transcription factor (cbf2 gene) Length = 965 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||||||| | |||||||| ||||||||||||||||||||||||||||| Sbjct: 218 ccgccgaagcgcccagcggggcgcaccaagttcaaggagacgcggcacccggt 270 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 443 tgcctcaacttcgccgactc 462
>emb|AM071406.1| Avena sativa mRNA for CBF-like transcription factor (cbf1 gene) Length = 872 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||||||| | |||||||| ||||||||||||||||||||||||||||| Sbjct: 217 ccgccgaagcgcccagcggggcgcaccaagttcaaggagacgcggcacccggt 269 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 439 tgcctcaacttcgccgactc 458
>gb|AY785902.1| Triticum aestivum cultivar Chinese Spring TaCBF5 (CBF5) mRNA, complete cds Length = 1121 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||| | ||||| ||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 166 gacggtgacgtcggcgccgcccaagcggccggcggggcggaccaagttccgggagacgcg 225 Query: 219 gcacccggtctacaagggcgtgcgccgg 246 |||||||| ||| |||||||||||| Sbjct: 226 ccacccggtgtaccgcggcgtgcgccgg 253 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 394 ctgcctcaacttcgccgactc 414
>ref|XM_483621.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 80 cgccgaagcggccggcggggcggaccaagttccaggagacgaggcacccggt 131
>gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing CBF1-like protein mRNA, complete cds Length = 717 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/114 (83%), Gaps = 3/114 (2%) Strand = Plus / Plus Query: 170 cggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtct 229 |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||| | Sbjct: 92 cggcgccgccgaagaggccggcggggcggaccaagttcagggagacgaggcacccggtgt 151 Query: 230 acaagggcgtgcgccggagg---aaccccgggaggtgggtctgcgaggtgcggg 280 | |||||||| |||||| || ||||||||||||| |||||||| |||| Sbjct: 152 tccgcggcgtgcggcggaggggcaatgccgggaggtgggtgtgcgaggtacggg 205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 330 ctgcctcaacttcgccgactc 350
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 27314067 cgccgaagcggccggcggggcggaccaagttccaggagacgaggcacccggt 27314016 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 27317710 tgcctcaacttcgccgactc 27317691
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 137270 cgccgaagcggccggcggggcggaccaagttccaggagacgaggcacccggt 137219 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 140913 tgcctcaacttcgccgactc 140894
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||| |||||||||||||||||| |||||||| |||||||||| Sbjct: 15594 cgccgaagcggccggcggggcggaccaagttccaggagacgaggcacccggt 15543 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 19237 tgcctcaacttcgccgactc 19218
>gb|AY706986.1| Vitis riparia CBF-like transcription factor (CBF4) gene, complete cds Length = 784 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 210 ggagacgcggcacccggtctacaagggcgtgcgccggaggaaccccgggaggtgggtctg 269 ||||||||||||||| || ||| |||||||| ||||||||| |||||| |||||| || Sbjct: 211 ggagacgcggcaccctgtgtaccgcggcgtgcggcggaggaactccgggaagtgggtatg 270 Query: 270 cgaggtgcgggagcc 284 ||||||| ||||||| Sbjct: 271 cgaggtgagggagcc 285
>gb|AY785861.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF6 (CBF6) gene, complete cds Length = 926 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| Sbjct: 215 tcggcgccggcgaagcggccggcggggcggaccaagttcagggagacgcgccacccggt 273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 439 ctgcctcaacttcgccgactc 459
>gb|AY785859.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF6 (CBF6) mRNA, complete cds Length = 1036 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| Sbjct: 239 tcggcgccggcgaagcggccggcggggcggaccaagttcagggagacgcgccacccggt 297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 463 ctgcctcaacttcgccgactc 483
>gb|AY785860.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF6 (CBF6) gene, complete cds Length = 926 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| Sbjct: 215 tcggcgccggcgaagcggccggcggggcggaccaagttcagggagacgcgccacccggt 273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 439 ctgcctcaacttcgccgactc 459
>gb|AF370730.1|AF370730 Secale cereale clone 81 CBF-like protein mRNA, complete cds Length = 1145 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||| | ||||||||||||||||||| | |||||||| Sbjct: 149 gacggtgtcgtcggagccgccgaagcgccccgcggggcggaccaagttccacgagacgcg 208 Query: 219 gcacccg 225 |||||| Sbjct: 209 ccacccg 215 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 380 ctgcctcaacttcgccgactc 400
>gb|AY785899.1| Sorghum bicolor cultivar BTX 623 SbCBF6 (CBF6) mRNA, complete cds Length = 958 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 178 ccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||| ||||||||||||||||||| ||||||| |||||||||| Sbjct: 178 ccgaagcggcccgcggggcggaccaagttccgggagacgaggcacccggt 227 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 390 ctgcctcaacttcgccgactc 410
>gb|AY785880.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF9 (CBF9) gene, complete cds Length = 1018 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||| ||||||||| | |||||||| Sbjct: 76 gacggtgtcgtcggagccgccgaagcggcccgcggggcgcaccaagttccacgagacgcg 135 Query: 219 gcaccc 224 ||||| Sbjct: 136 ccaccc 141 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 307 ctgcctcaacttcgccgactc 327
>gb|AY785879.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF9 (CBF9) gene, complete cds Length = 1018 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||| ||||||||| | |||||||| Sbjct: 76 gacggtgtcgtcggagccgccgaagcggcccgcggggcgcaccaagttccacgagacgcg 135 Query: 219 gcaccc 224 ||||| Sbjct: 136 ccaccc 141 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 307 ctgcctcaacttcgccgactc 327
>gb|AY785877.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF9 (CBF9) mRNA, complete cds Length = 1111 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||| ||||||||| | |||||||| Sbjct: 111 gacggtgtcgtcggagccgccgaagcggcccgcggggcgcaccaagttccacgagacgcg 170 Query: 219 gcaccc 224 ||||| Sbjct: 171 ccaccc 176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 342 ctgcctcaacttcgccgactc 362
>gb|AY785878.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF9 (CBF9) gene, complete cds Length = 1018 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||| ||||||||| | |||||||| Sbjct: 76 gacggtgtcgtcggagccgccgaagcggcccgcggggcgcaccaagttccacgagacgcg 135 Query: 219 gcaccc 224 ||||| Sbjct: 136 ccaccc 141 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 307 ctgcctcaacttcgccgactc 327
>gb|AY785852.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF4D (CBF4D) gene, partial cds Length = 639 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| |||| ||||||||||||| ||||||||| ||||||||| | |||||||| Sbjct: 39 gacggtgtcgtcggagccgccgaagcggcccgcggggcgcaccaagttccacgagacgcg 98 Query: 219 gcaccc 224 ||||| Sbjct: 99 ccaccc 104 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 270 ctgcctcaacttcgccgactc 290
>emb|AJ717399.1| Schedonorus arundinaceus mRNA for putative DREB1A protein (DREB1A gene) Length = 864 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 180 gaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||| ||||||||||| ||||||| |||||||||||||||||| Sbjct: 127 gaagcggccggcggggcggacaaagttcagggagacgcggcacccggt 174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 337 ctgcctcaacttcgccgactc 357
>gb|DQ353853.1| Triticum aestivum AP2 domain transcription factor TaDREB3 mRNA, complete cds Length = 1004 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaag 234 ||||| ||||||| |||||||||||||||||| ||||||||| |||||| ||||| Sbjct: 169 ccgcctaagcggccggcggggcggaccaagttccgggagacgcgccacccgctctaccgc 228 Query: 235 ggcgtgcgccgg 246 |||||||||||| Sbjct: 229 ggcgtgcgccgg 240 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 381 ctgcctcaacttcgccgactc 401
>gb|AY785901.1| Triticum aestivum cultivar Chinese Spring TaCBF14 (CBF14) mRNA, complete cds Length = 1049 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccg 225 ||||||||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 156 ccgccgaagcggccggccggccggaccaagttcaaggagacgcgccacccg 206
>gb|AY785898.1| Sorghum bicolor SbCBF5 (CBF5) mRNA, complete cds Length = 1046 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||||| | |||||| |||||||||||| ||||||||| |||||||| Sbjct: 169 tcggcgccgccgaagcgccccgcgggtcggaccaagttccgggagacgcgtcacccggt 227 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 387 ctgcctcaacttcgccgactc 407
>gb|DQ151545.1| Hordeum vulgare subsp. vulgare cultivar Morex CBF14 (CBF14) gene, complete cds Length = 1053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccg 225 ||||||||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 137 ccgccgaagcggcctgccggccggaccaagttcaaggagacgcgccacccg 187
>gb|DQ095159.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF14 (CBF14) gene, complete cds Length = 1053 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccg 225 ||||||||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 137 ccgccgaagcggcctgccggccggaccaagttcaaggagacgcgccacccg 187
>gb|AY785862.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF6 (CBF6) gene, complete cds Length = 926 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 169 tcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||| ||||||||| ||||||||||||||||||| ||||||||| || ||||| Sbjct: 215 tcggcgccggcgaagcggccggcggggcggaccaagttcagggagacgcgccatccggt 273 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 439 ctgcctcaacttcgccgactc 459
>gb|AY951949.1| Triticum monococcum CRT/DRE binding factor 3 (CBF3) gene, complete cds Length = 1971 Score = 61.9 bits (31), Expect = 2e-06 Identities = 78/93 (83%), Gaps = 3/93 (3%) Strand = Plus / Plus Query: 189 cgcggggcggaccaagttcaaggagacgcggcacccggtctacaagggcgt---gcgccg 245 ||||||||| ||||||||| |||||||||||||||||| ||| ||||| |||||| Sbjct: 619 cgcggggcgcaccaagttccgggagacgcggcacccggtgtaccgcggcgtgcggcgccg 678 Query: 246 gaggaaccccgggaggtgggtctgcgaggtgcg 278 | | ||| ||| | ||||||||||||||||||| Sbjct: 679 gggcaacgccgagcggtgggtctgcgaggtgcg 711
>gb|AY951948.1| Triticum monococcum CRT/DRE binding factor 14 (CBF14) gene, complete cds Length = 5244 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccg 225 ||||||||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 682 ccgccgaagcggccggccggccggaccaagttcaaggagacgcgccacccg 732
>gb|AY572831.1| Triticum aestivum C repeat-binding factor 2 mRNA, complete cds Length = 645 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccg 225 ||||||||||||| || || ||||||||||||||||||||||| |||||| Sbjct: 58 ccgccgaagcggccggccggccggaccaagttcaaggagacgcgccacccg 108
>gb|AY785897.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1F (DREB1F) gene, complete cds Length = 660 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| |||||||||| || ||| |||||||||||||||||| Sbjct: 85 ccgccgaagcggcgggcggggcggaagaaattccgggagacgcggcacccggt 137 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 aggtgggtctgcgaggtgcgggagccgca 287 |||||||| ||||||||||| |||||||| Sbjct: 172 aggtgggtgtgcgaggtgcgcgagccgca 200
>ref|NM_189432.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 660 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| |||||||||| || ||| |||||||||||||||||| Sbjct: 85 ccgccgaagcggcgggcggggcggaagaaattccgggagacgcggcacccggt 137 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 aggtgggtctgcgaggtgcgggagccgca 287 |||||||| ||||||||||| |||||||| Sbjct: 172 aggtgggtgtgcgaggtgcgcgagccgca 200
>gb|AY423713.1| Schedonorus arundinaceus putative DRE-binding protein DREB1 (DREB1) mRNA, complete cds Length = 988 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 191 cggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| ||||||||| ||||||||||||||||||| Sbjct: 195 cggggcgcaccaagttccaggagacgcggcacccggt 231
>gb|AY345234.1| Oryza sativa transcription factor RCBF2 mRNA, complete cds Length = 840 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| |||||||||| || ||| |||||||||||||||||| Sbjct: 154 ccgccgaagcggcgggcggggcggaagaaattccgggagacgcggcacccggt 206 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 aggtgggtctgcgaggtgcgggagccgca 287 |||||||| ||||||||||| |||||||| Sbjct: 241 aggtgggtgtgcgaggtgcgcgagccgca 269
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| |||||||||| || ||| |||||||||||||||||| Sbjct: 42719937 ccgccgaagcggcgggcggggcggaagaaattccgggagacgcggcacccggt 42719989 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 aggtgggtctgcgaggtgcgggagccgca 287 |||||||| ||||||||||| |||||||| Sbjct: 42720024 aggtgggtgtgcgaggtgcgcgagccgca 42720052 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 37583886 tggctcggcacgttcgagac 37583867
>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1656_A11 Length = 148887 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| |||||||||| || ||| |||||||||||||||||| Sbjct: 52702 ccgccgaagcggcgggcggggcggaagaaattccgggagacgcggcacccggt 52754 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 aggtgggtctgcgaggtgcgggagccgca 287 |||||||| ||||||||||| |||||||| Sbjct: 52789 aggtgggtgtgcgaggtgcgcgagccgca 52817
>emb|AM071409.1| Avena sativa partial mRNA for CBF-like transcription factor (cbf4 gene) Length = 848 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcaccc 224 |||||||||| | |||||| || |||||||||||||||||||| ||||| Sbjct: 166 cgccgaagcgccccgcgggacgcaccaagttcaaggagacgcgccaccc 214
>gb|AY785894.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1B.1 (DREB1B) mRNA, complete cds Length = 925 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||| |||||||| |||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 35 cgtacaggacggtgtggtcggagccgccgaagaggccggcgggaaggaccaagttcaggg 94 Query: 212 agacgcggcacccggt 227 ||||| |||||||||| Sbjct: 95 agacgaggcacccggt 110 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 285 ctgcctcaacttcgccgactc 305 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 gggaggtgggtctgcgaggtgcggg 280 ||||||||||| ||||||||||||| Sbjct: 154 gggaggtgggtgtgcgaggtgcggg 178
>gb|AY502052.1| Oryza sativa (indica cultivar-group) CRT/DRE binding protein gene, complete cds Length = 1103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 235 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 282 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 451 gcctcaacttcgccgactct 470
>gb|AY345235.1| Oryza sativa transcription factor RCBF4 mRNA, complete cds Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 142 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 189 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 358 gcctcaacttcgccgactct 377
>gb|AY319971.1| Oryza sativa Dre-binding protein gene, complete cds Length = 902 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||| |||||||| |||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 40 cgtacaggacggtgtggtcggagccgccgaagaggccggcgggaaggaccaagttcaggg 99 Query: 212 agacgcggcacccggt 227 ||||| |||||||||| Sbjct: 100 agacgaggcacccggt 115 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 gggaggtgggtctgcgaggtgcggg 280 ||||||||||| ||||||||||||| Sbjct: 159 gggaggtgggtgtgcgaggtgcggg 183 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgact 403 |||||||||||||||||||| Sbjct: 290 ctgcctcaacttcgccgact 309
>gb|AF243384.1| Oryza sativa CRT/DRE binding factor (CBF) mRNA, complete cds Length = 904 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 89 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 136 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 305 gcctcaacttcgccgactct 324
>gb|AF300972.1| Oryza sativa putative DRE-binding protein 1B mRNA, complete cds Length = 897 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||| |||||||| |||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 35 cgtacaggacggtgtggtcggagccgccgaagaggccggcgggaaggaccaagttcaggg 94 Query: 212 agacgcggcacccggt 227 ||||| |||||||||| Sbjct: 95 agacgaggcacccggt 110 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 gggaggtgggtctgcgaggtgcggg 280 ||||||||||| ||||||||||||| Sbjct: 154 gggaggtgggtgtgcgaggtgcggg 178 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgact 403 |||||||||||||||||||| Sbjct: 285 ctgcctcaacttcgccgact 304
>gb|AY166833.1| Oryza sativa (indica cultivar-group) putative DRE-binding protein 1B mRNA, complete cds Length = 862 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 152 cgtacatgacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaagg 211 |||||| |||||||| |||| ||||||||| ||| ||||| |||||||||||| || Sbjct: 25 cgtacaggacggtgtggtcggagccgccgaagaggccggcgggaaggaccaagttcaggg 84 Query: 212 agacgcggcacccggt 227 ||||| |||||||||| Sbjct: 85 agacgaggcacccggt 100 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 275 ctgcctcaacttcgccgactc 295 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 gggaggtgggtctgcgaggtgcggg 280 ||||||||||| ||||||||||||| Sbjct: 144 gggaggtgggtgtgcgaggtgcggg 168
>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14 Length = 150650 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 97362 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 97409 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 97578 gcctcaacttcgccgactct 97597
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 1553 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 1600 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 1769 gcctcaacttcgccgactct 1788
>gb|AY785895.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare OsDREB1D (DREB1D) gene, complete cds Length = 762 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 65 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 112 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 281 gcctcaacttcgccgactct 300
>gb|AY607691.1| Oryza sativa (japonica cultivar-group) cold-induced CBF/DREB transcription factor mRNA, complete cds Length = 904 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacc 223 |||||||||||| |||||||| ||||||||| |||||||| |||||| Sbjct: 89 cgccgaagcggccggcggggcgaaccaagttccaggagacgaggcacc 136 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gcctcaacttcgccgactct 405 |||||||||||||||||||| Sbjct: 305 gcctcaacttcgccgactct 324
>gb|AY785900.1| Triticum aestivum cultivar Brevor TaCBF2 (CBF2) mRNA, complete cds Length = 945 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggtctacaag 234 |||||||||||||| |||||||||| |||||| ||||||| || ||||| || ||| Sbjct: 139 ccgccgaagcggcgggcggggcggaacaagttgcaggagacacgccacccagtgtaccgc 198 Query: 235 ggcgtgcgccg 245 ||||||||||| Sbjct: 199 ggcgtgcgccg 209 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 361 tgcctcaacttcgccgactc 380
>gb|AF370729.1|AF370729 Secale cereale clone 80 CBF-like protein mRNA, complete cds Length = 1040 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccg 225 ||||||||||| | ||||||| ||||||||||| | |||||||| |||||| Sbjct: 167 ccgccgaagcgccccgcggggaggaccaagttccacgagacgcgccacccg 217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 382 ctgcctcaacttcgccgactc 402
>gb|AY951951.1| Triticum monococcum CRT/DRE binding factor 13 (CBF13) gene, complete cds Length = 3137 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/93 (82%), Gaps = 3/93 (3%) Strand = Plus / Minus Query: 189 cgcggggcggaccaagttcaaggagacgcggcacccggtctacaagggcgtgcgccggag 248 ||||||||| ||||||||| |||||||||||||||||| ||| |||||||| || || Sbjct: 1785 cgcggggcgcaccaagttccgggagacgcggcacccggtgtaccgcggcgtgcggcgcag 1726 Query: 249 g---aaccccgggaggtgggtctgcgaggtgcg 278 | ||| | ||| ||||||| ||||||||||| Sbjct: 1725 gggcaacgcggggcggtgggtgtgcgaggtgcg 1693
>gb|DQ286550.1| Triticum aestivum CBF4-like protein (CBF4) mRNA, complete cds Length = 936 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 159 gacggtgtcttcggctccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcg 218 ||||||||| | || ||| || ||||||| |||||||||||||||||| | |||||||| Sbjct: 147 gacggtgtcgtgggatcccccaaagcggccggcggggcggaccaagttccacgagacgcg 206 Query: 219 gcacccg 225 |||||| Sbjct: 207 ccacccg 213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 378 ctgcctcaacttcgccgactc 398
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcaccc 224 ||||||||| |||| ||||||||||||| |||||||| ||||||| Sbjct: 7177568 cgaagcggccggcggcgcggaccaagttccaggagacgaggcaccc 7177523
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcaccc 224 ||||||||| |||| ||||||||||||| |||||||| ||||||| Sbjct: 7177447 cgaagcggccggcggcgcggaccaagttccaggagacgaggcaccc 7177402
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcaccc 224 ||||||||| |||| ||||||||||||| |||||||| ||||||| Sbjct: 78547 cgaagcggccggcggcgcggaccaagttccaggagacgaggcaccc 78592
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcaccc 224 ||||||||| |||| ||||||||||||| |||||||| ||||||| Sbjct: 33881 cgaagcggccggcggcgcggaccaagttccaggagacgaggcaccc 33836
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription factor, complete cds Length = 941 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccg 225 |||||||||||||||| ||||||||| |||||| Sbjct: 137 gggcggaccaagttcagggagacgcgccacccg 169 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 334 ctgcctcaacttcgccgactc 354
>dbj|AB178166.1| Triticum aestivum Wcbf2-1 mRNA for AP2/EREBP type transcription factor, complete cds Length = 790 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccg 225 |||||||||||||| ||||||||||| |||||| Sbjct: 137 gggcggaccaagtttaaggagacgcgccacccg 169 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 334 ctgcctcaacttcgccgactc 354
>gb|AY785844.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF2B (CBF2B) gene, complete cds Length = 775 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 106 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 325 tgcctcaacttcgccgactc 344
>gb|DQ097684.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF2B (CBF2B) gene, complete cds Length = 1116 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 194 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 246 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 413 tgcctcaacttcgccgactc 432
>gb|AY785843.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF2A (CBF2A) gene, complete cds Length = 799 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 106 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 325 tgcctcaacttcgccgactc 344
>gb|AY785842.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF2A (CBF2A) gene, complete cds Length = 772 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 106 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 325 tgcctcaacttcgccgactc 344
>gb|AY785840.1| Hordeum vulgare subsp. vulgare cultivar Morex HvCBF2A (CBF2A) gene, complete cds Length = 772 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 106 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 325 tgcctcaacttcgccgactc 344
>gb|AY785841.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF2A (CBF2A) gene, complete cds Length = 772 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 106 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 325 tgcctcaacttcgccgactc 344
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA, complete cds Length = 800 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccg 225 |||||||||||||||| ||||||||| |||||| Sbjct: 94 gggcggaccaagttcagggagacgcgccacccg 126 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 291 ctgcctcaacttcgccgactc 311
>gb|AF298231.1| Hordeum vulgare CBF3-like protein BCBF3 (BCBF3) gene, complete cds Length = 1922 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 756 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 804
>gb|AF239616.1| Hordeum vulgare CRT/DRE-binding factor (CBF) mRNA, complete cds Length = 1015 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 186 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 234
>gb|AF442489.1| Hordeum vulgare subsp. vulgare CRT/DRE binding factor 2 (CBF2) mRNA, complete cds Length = 817 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 126 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 178 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 345 tgcctcaacttcgccgactc 364
>gb|AY895853.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 563 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895852.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531851 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 563 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895841.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 563 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 611
>gb|AY895840.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 563 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 611
>gb|AY895836.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 563 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 611
>gb|AY895834.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 179 cgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 ||||||| | ||| ||||| ||||||||| |||||||||||||||||| Sbjct: 563 cgaagcgccccgctgggcgcaccaagttccgggagacgcggcacccggt 611
>gb|DQ250027.1| Hordeum brevisubulatum dehydration-responsive element-binding protein 1 (DREB1) mRNA, complete cds Length = 899 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||||||||||| || || |||| |||||| |||||||||| |||||||| Sbjct: 106 ccgccgaagcggcgggccggccggatcaagttgcaggagacgcgccacccggt 158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 325 tgcctcaacttcgccgactc 344
>ref|XM_477055.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 299 ggatatggctcggcacgttcgagaccgc 326 |||| ||||||||||||||||||||||| Sbjct: 191 ggatgtggctcggcacgttcgagaccgc 218
>gb|AF450481.1| Zea mays DREB-like protein (DREB1A) mRNA, complete cds Length = 1085 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Plus Query: 180 gaagcggcgcgcggggcggaccaagttcaaggagacgcggcacccggt 227 |||||| | ||||||||| || |||||| |||||||||||||||||| Sbjct: 260 gaagcgccccgcggggcgcacaaagttccgggagacgcggcacccggt 307
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 299 ggatatggctcggcacgttcgagaccgc 326 |||| ||||||||||||||||||||||| Sbjct: 5626252 ggatgtggctcggcacgttcgagaccgc 5626279 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 12773331 tggctcggcacgttcgagac 12773312
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 299 ggatatggctcggcacgttcgagaccgc 326 |||| ||||||||||||||||||||||| Sbjct: 87944 ggatgtggctcggcacgttcgagaccgc 87971
>gb|AY785847.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 HvCBF3 (CBF3) gene, complete cds Length = 1209 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 240 gggcgcaccaagttccgggagacgcggcacccggt 274 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 441 tgcctcaacttcgccgactc 460
>gb|AY785846.1| Hordeum vulgare subsp. vulgare cultivar Strider HvCBF3 (CBF3) gene, complete cds Length = 910 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 240 gggcgcaccaagttccgggagacgcggcacccggt 274 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 441 tgcctcaacttcgccgactc 460
>gb|AY785845.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo HvCBF3 (CBF3) gene, complete cds Length = 910 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 240 gggcgcaccaagttccgggagacgcggcacccggt 274 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 441 tgcctcaacttcgccgactc 460
>gb|AF474889.1| Oryza sativa putative drought resistant protein mRNA, partial cds Length = 194 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 197 ggaccaagttcaaggagacgcggcacccggt 227 |||||||||||| ||||||| |||||||||| Sbjct: 79 ggaccaagttcagggagacgaggcacccggt 109
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 gccgaagcggcgcgcggggcgga 199 ||||||||||||||||||||||| Sbjct: 2806473 gccgaagcggcgcgcggggcgga 2806495
>gb|AY895856.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895855.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895854.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 C-repeat binding factor 3-like protein-like (CFB3) gene, complete sequence Length = 1510 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 577 gggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895851.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 C-repeat binding factor 3-like protein-like (CFB3) gene, complete sequence Length = 1510 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 577 gggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895850.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1481 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 563 gggcgcaccaagttccgggagacgcggcacccggt 597
>gb|AY895849.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 C-repeat binding factor 3-like protein-like (CFB3) gene, complete sequence Length = 1510 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 577 gggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895848.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 559 gggcgcaccaagttccgggagacgcggcacccggt 593
>gb|AY895847.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 559 gggcgcaccaagttccgggagacgcggcacccggt 593
>gb|AY895846.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401371 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895845.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895844.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895843.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 296926 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 577 gggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895842.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895839.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895838.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 559 gggcgcaccaagttccgggagacgcggcacccggt 593
>gb|AY895837.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 253933 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895835.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 577 gggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895833.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 219796 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1510 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 577 gggcgcaccaagttccgggagacgcggcacccggt 611 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 778 tgcctcaacttcgccgactc 797
>gb|AY895832.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>gb|AY895831.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212305 C-repeat binding factor 3-like protein (CFB3) gene, complete cds Length = 1511 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccggt 227 ||||| ||||||||| |||||||||||||||||| Sbjct: 578 gggcgcaccaagttccgggagacgcggcacccggt 612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 779 tgcctcaacttcgccgactc 798
>ref|NM_101405.2| Arabidopsis thaliana DNA binding / transcription factor AT1G15360 mRNA, complete cds Length = 835 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 gaggatatggctcggcacgttcgagaccgcagag 330 |||||| ||||| || |||||||||||||||||| Sbjct: 155 gaggatttggctagggacgttcgagaccgcagag 188
>gb|AY378101.1| Arabidopsis thaliana transcription factor wax inducer 1 (WIN1) mRNA, complete cds Length = 768 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 gaggatatggctcggcacgttcgagaccgcagag 330 |||||| ||||| || |||||||||||||||||| Sbjct: 144 gaggatttggctagggacgttcgagaccgcagag 177
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 gcggctgaggcattcctgccggcacc 497 ||||||| |||||||||||||||||| Sbjct: 107908 gcggctgcggcattcctgccggcacc 107883
>gb|AY951946.1| Triticum monococcum CRT/DRE binding factor 18 (CBF18) gene, complete cds Length = 2166 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 175 ccgccgaagcggcgcgcggggcggaccaagttcaaggagacgcggcaccc 224 ||||||||||| | |||||| || |||||||| ||||||||||||||| Sbjct: 600 ccgccgaagcgccccgcgggccgcaccaagtttcgggagacgcggcaccc 649
>gb|BT005220.1| Arabidopsis thaliana At1g15360 mRNA, complete cds Length = 600 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 gaggatatggctcggcacgttcgagaccgcagag 330 |||||| ||||| || |||||||||||||||||| Sbjct: 87 gaggatttggctagggacgttcgagaccgcagag 120
>gb|AY085720.1| Arabidopsis thaliana clone 17356 mRNA, complete sequence Length = 753 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 gaggatatggctcggcacgttcgagaccgcagag 330 |||||| ||||| || |||||||||||||||||| Sbjct: 112 gaggatttggctagggacgttcgagaccgcagag 145
>dbj|AK117941.1| Arabidopsis thaliana At1g15360 mRNA for putative ethylene responsive element, complete cds, clone: RAFL19-13-G20 Length = 836 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 gaggatatggctcggcacgttcgagaccgcagag 330 |||||| ||||| || |||||||||||||||||| Sbjct: 155 gaggatttggctagggacgttcgagaccgcagag 188
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 gaggatatggctcggcacgttcgagaccgcagag 330 |||||| ||||| || |||||||||||||||||| Sbjct: 99523 gaggatttggctagggacgttcgagaccgcagag 99556
>gb|AF370732.1| Brassica oleracea clone 534 CBF-like protein mRNA, complete cds Length = 753 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 300 ctgcctcaacttcgccgactc 320
>ref|XM_468272.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 ggatatggctcggcacgttcgagac 323 |||||||||| |||||||||||||| Sbjct: 92 ggatatggctgggcacgttcgagac 116
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 454 cggcgggcggcggtagaggcggctg 478 ||||||||||||| ||||||||||| Sbjct: 44672 cggcgggcggcggcagaggcggctg 44648
>gb|AC137512.2| Mus musculus chromosome 12 clone RP24-323C12, complete sequence Length = 164776 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 ccactccctccccctgcttac 34 ||||||||||||||||||||| Sbjct: 21265 ccactccctccccctgcttac 21245
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 cggtgggcgcggacggcggca 133 ||||||||||||||||||||| Sbjct: 480 cggtgggcgcggacggcggca 460
>gb|AF370734.1|AF370734 Brassica napus clone 663 CBF-like protein mRNA, complete cds Length = 898 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 396 ctgcctcaacttcgccgactc 416
>gb|AF370733.1|AF370733 Brassica napus clone 662 CBF-like protein mRNA, complete cds Length = 874 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 375 ctgcctcaacttcgccgactc 395
>gb|AF370728.1|AF370728 Secale cereale clone 79 CBF-like protein mRNA, complete cds Length = 850 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 193 gggcggaccaagttcaaggagacgcggcacccg 225 |||||||||||||| |||||||| || |||||| Sbjct: 150 gggcggaccaagtttaaggagacccgccacccg 182 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 348 tgcctcaacttcgccgactc 367
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 454 cggcgggcggcggtagaggcggctg 478 ||||||||||||| ||||||||||| Sbjct: 5511463 cggcgggcggcggcagaggcggctg 5511439
>gb|DQ022955.1| Brassica rapa subsp. pekinensis CBF-like protein (CBF2) mRNA, complete cds Length = 780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 303 ctgcctcaacttcgccgactc 323
>gb|AF499034.1| Brassica napus CBF-like protein CBF17 (CBF17) mRNA, complete cds Length = 1185 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgcctcaacttcgccgactc 404 ||||||||||||||||||||| Sbjct: 422 ctgcctcaacttcgccgactc 442
>dbj|BS000203.1| Pan troglodytes chromosome 22 clone:PTB-155H17, map 22, complete sequences Length = 196470 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ctgcttccactccctccccctgctt 32 |||||||| |||||||||||||||| Sbjct: 145334 ctgcttcccctccctccccctgctt 145310
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ggatatggctcggcacgttcgagac 323 |||||||||| |||||||||||||| Sbjct: 98156 ggatatggctgggcacgttcgagac 98132
>gb|AC101935.10| Mus musculus chromosome 15, clone RP24-76H22, complete sequence Length = 216277 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 ccactccctccccctgcttac 34 ||||||||||||||||||||| Sbjct: 82285 ccactccctccccctgcttac 82305
>emb|AJ634001.1| Schedonorus arundinaceus mRNA for putative dehydration responsive element binding protein (dreb1 gene) Length = 881 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 199 accaagttcaaggagacgcggcacccggt 227 ||||||||| ||||| ||||||||||||| Sbjct: 98 accaagttccaggaggcgcggcacccggt 126
>dbj|AP001725.1| Homo sapiens genomic DNA, chromosome 21q, section 69/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ctgcttccactccctccccctgctt 32 |||||||| |||||||||||||||| Sbjct: 274871 ctgcttcccctccctccccctgctt 274847
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 ggcggtagaggcggctgaggc 482 ||||||||||||||||||||| Sbjct: 1654226 ggcggtagaggcggctgaggc 1654206
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 cggtgggcgcggacggcggca 133 ||||||||||||||||||||| Sbjct: 48352 cggtgggcgcggacggcggca 48332
>dbj|AP000693.1| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB739C11, CBR1-HLCS region Length = 11597 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ctgcttccactccctccccctgctt 32 |||||||| |||||||||||||||| Sbjct: 5635 ctgcttcccctccctccccctgctt 5611
>ref|XM_483622.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 289 tgcctcaacttcgccgactc 308
>ref|NM_190766.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1161 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 568 tggctcggcacgttcgagac 587
>ref|XM_477669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 899 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 349 tggctcggcacgttcgagac 368
>ref|XM_473412.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 744 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 tggctcggcacgttcgagaccgcagaga 331 ||||||||||||||||| ||||| |||| Sbjct: 265 tggctcggcacgttcgacaccgccgaga 292
>gb|AC119982.6| Mus musculus chromosome 19, clone RP24-498L9, complete sequence Length = 177924 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 accacctgcttccactccct 22 |||||||||||||||||||| Sbjct: 88607 accacctgcttccactccct 88588
>gb|AY642596.1| Glycine soja DREB1 mRNA, partial cds Length = 197 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 175 tgcctcaacttcgccgactc 194
>gb|BC026051.1| Mus musculus laminin, beta 2, mRNA (cDNA clone MGC:13735 IMAGE:4036357), complete cds Length = 5583 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gtagaggcggctgaggcatt 485 |||||||||||||||||||| Sbjct: 3808 gtagaggcggctgaggcatt 3789
>gb|BC052701.1| Mus musculus Pbx/knotted 1 homeobox, mRNA (cDNA clone MGC:64705 IMAGE:5721441), complete cds Length = 4116 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catagccaggcagccatgga 68 |||||||||||||||||||| Sbjct: 2222 catagccaggcagccatgga 2203
>ref|NM_016670.2| Mus musculus Pbx/knotted 1 homeobox (Pknox1), mRNA Length = 4116 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catagccaggcagccatgga 68 |||||||||||||||||||| Sbjct: 2222 catagccaggcagccatgga 2203
>gb|DQ472109.1| Pachydictyon coriaceum strain CSUF003 26S ribosomal RNA gene, partial sequence Length = 1231 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gctccgccgaagcggcgcgc 191 |||||||||||||||||||| Sbjct: 521 gctccgccgaagcggcgcgc 502
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cggctccgccgaagcggcgc 189 |||||||||||||||||||| Sbjct: 1321794 cggctccgccgaagcggcgc 1321775
>ref|XM_382748.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02572.1) partial mRNA Length = 2331 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cttcgccgactctcctcgtc 412 |||||||||||||||||||| Sbjct: 422 cttcgccgactctcctcgtc 441
>ref|NM_008483.2| Mus musculus laminin, beta 2 (Lamb2), mRNA Length = 5583 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gtagaggcggctgaggcatt 485 |||||||||||||||||||| Sbjct: 3808 gtagaggcggctgaggcatt 3789
>ref|XM_547546.2| PREDICTED: Canis familiaris similar to RUN and SH3 domain containing protein 1 (New molecule containing SH3 at the carboxy-terminus) (Nesca) (LOC490424), mRNA Length = 3109 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 cgccgtccccggtgggcgcg 123 |||||||||||||||||||| Sbjct: 1115 cgccgtccccggtgggcgcg 1134
>gb|AY428036.1| Triticum aestivum dehydration response element binding protein mRNA, partial cds Length = 292 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 1 tgcctcaacttcgccgactc 20
>gb|AC018464.9| Homo sapiens BAC clone RP11-328M22 from 7, complete sequence Length = 155862 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aaaccacctgcttccactcc 20 |||||||||||||||||||| Sbjct: 49507 aaaccacctgcttccactcc 49526
>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence Length = 200353 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catagccaggcagccatgga 68 |||||||||||||||||||| Sbjct: 21223 catagccaggcagccatgga 21242
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ggcgcggacggcggcaacag 137 |||||||||||||||||||| Sbjct: 803112 ggcgcggacggcggcaacag 803131
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ggcgcggacggcggcaacag 137 |||||||||||||||||||| Sbjct: 300573 ggcgcggacggcggcaacag 300592
>gb|AY311483.1| Secale cereale dehydration responsive element binding protein mRNA, partial cds Length = 438 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgcctcaacttcgccgactc 404 |||||||||||||||||||| Sbjct: 1 tgcctcaacttcgccgactc 20
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ggcggcggtagaggcggctg 478 |||||||||||||||||||| Sbjct: 188711 ggcggcggtagaggcggctg 188730
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17, complete sequence Length = 127259 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 tggctcggcacgttcgagaccgcagaga 331 ||||||||||||||||| ||||| |||| Sbjct: 20918 tggctcggcacgttcgacaccgccgaga 20945
>gb|AC090881.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, RP23-465G4, Complete Sequence, complete sequence Length = 167475 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catagccaggcagccatgga 68 |||||||||||||||||||| Sbjct: 35707 catagccaggcagccatgga 35688
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctgatgagatacggcgggcg 462 |||||||||||||||||||| Sbjct: 808179 ctgatgagatacggcgggcg 808198
>dbj|AK140351.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430218D13 product:laminin, beta 2, full insert sequence Length = 4219 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gtagaggcggctgaggcatt 485 |||||||||||||||||||| Sbjct: 3860 gtagaggcggctgaggcatt 3841
>gb|AF350253.1|AF350253 Myxococcus xanthus act operon, complete sequence Length = 9037 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tccccggtgggcgcggacggcggc 132 |||||||||||||||| ||||||| Sbjct: 3928 tccccggtgggcgcgggcggcggc 3905
>gb|AC137625.2| Homo sapiens 3 BAC RP11-1114A3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 103065 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cgggagccgcacagcaagcagagg 300 ||||||| |||||||||||||||| Sbjct: 39095 cgggagctgcacagcaagcagagg 39118
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 44360 tggctcggcacgttcgagac 44341
>gb|DQ074478.1| Malus x domestica CBF1 mRNA, complete cds Length = 926 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 245 ggaggaaccccgggaggtgggtctgcgaggtgcgggagcc 284 |||||||| |||| | |||||| ||||||||||| ||||| Sbjct: 349 ggaggaactccggcaagtgggtgtgcgaggtgcgcgagcc 388
>gb|AF230804.1|AF230804 Myxococcus xanthus sigma-54 activator protein Act1 gene, complete cds Length = 1689 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 tccccggtgggcgcggacggcggc 132 |||||||||||||||| ||||||| Sbjct: 1499 tccccggtgggcgcgggcggcggc 1476
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 31455 tggctcggcacgttcgagac 31436
>dbj|AK108503.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-H07, full insert sequence Length = 899 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tggctcggcacgttcgagac 323 |||||||||||||||||||| Sbjct: 349 tggctcggcacgttcgagac 368
>gb|AY107781.1| Zea mays PCO092441 mRNA sequence Length = 847 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cgccgaagcggcgcgcgggg 195 |||||||||||||||||||| Sbjct: 364 cgccgaagcggcgcgcgggg 383
>gb|U43541.1|MMLAMBETA2 Mus musculus laminin beta 2 gene, exons 17-33, and complete cds Length = 5350 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gtagaggcggctgaggcatt 485 |||||||||||||||||||| Sbjct: 2704 gtagaggcggctgaggcatt 2685
>emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chromosome 9, complete sequence Length = 223547 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gtagaggcggctgaggcatt 485 |||||||||||||||||||| Sbjct: 137578 gtagaggcggctgaggcatt 137559
>gb|AC132589.4| Mus musculus BAC clone RP24-258M24 from 1, complete sequence Length = 168097 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 tgggtctgcgaggtgcggga 281 |||||||||||||||||||| Sbjct: 109838 tgggtctgcgaggtgcggga 109857
>emb|AJ969094.1| Porphyromonas gingivalis capsular polysaccharide synthesis (K-antigen) locus, strain HG1703 Length = 3001 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gagccgcacagcaagcagag 299 |||||||||||||||||||| Sbjct: 693 gagccgcacagcaagcagag 674
>emb|AJ969093.1| Porphyromonas gingivalis capsular polysaccharide synthesis (K-antigen) locus, strain 381 Length = 12884 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gagccgcacagcaagcagag 299 |||||||||||||||||||| Sbjct: 9476 gagccgcacagcaagcagag 9457 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,036,103 Number of Sequences: 3902068 Number of extensions: 3036103 Number of successful extensions: 68429 Number of sequences better than 10.0: 221 Number of HSP's better than 10.0 without gapping: 225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66864 Number of HSP's gapped (non-prelim): 1558 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)