ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16c04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, complete cds Length = 1380 Score = 1007 bits (508), Expect = 0.0 Identities = 546/559 (97%) Strand = Plus / Plus Query: 24 gcctcgtccgccgttccccgtgaggtgattggcagattgcttcttcctccgccgggatcc 83 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcctcgcccgccattccccgtgaggtgattggcagattgcttcttcctccgccgggatcc 60 Query: 84 ctccgtctccatggccgcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggt 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctccgtctccatggccgcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggt 120 Query: 144 cggatccagggccgcgcacacgtctgcaggcagcaagaagatcgtcggcgtgttctacca 203 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggatccagggccgcgcacacgtctgcaggcagcaagaagatcgtcggcgtgttctacca 180 Query: 204 ggccggcgagtacgccgacaagaaccccaacttcgtcggctgcgtcgagggtgccctcgg 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggccggcgagtacgccgacaagaaccccaacttcgtcggctgcgtcgagggtgccctcgg 240 Query: 264 catacgcgactggctcgagtccaaggggcaccactacattgtcaccgacgacaaggaggg 323 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 241 catacgcgactggctcgagtcgaaggggcaccactacattgtcaccgacgacaaggaggg 300 Query: 324 gttgaacagcgagctggagaagcacattgaagacatgcatgtcctgataaccaccccatt 383 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtttaacagcgagctggagaagcacattgaagacatgcatgtcctgataaccaccccatt 360 Query: 384 ccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttct 443 |||||||||||||||||||||||| | ||||||||||||||||| || |||||||||||| Sbjct: 361 ccacccagcctatgttactgcagaaaagatcaagaaggcaaagacccccgagctgcttct 420 Query: 444 cacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgac 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgac 480 Query: 504 tgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcat 563 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 tgtggccagggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcat 540 Query: 564 cttgattctgctcangaac 582 |||||||||||||| |||| Sbjct: 541 cttgattctgctcaggaac 559
>gb|AF479036.1| Triticum aestivum formate dehydrogenase mRNA, partial cds Length = 801 Score = 892 bits (450), Expect = 0.0 Identities = 509/529 (96%) Strand = Plus / Plus Query: 54 ggcagattgcttcttcctccgccgggatccctccgtctccatggccgcgatgtggagggc 113 |||||||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 3 ggcagattgcttctccctccgccgggatctctccgtctccatggctgcgatgtgcagggc 62 Query: 114 cgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcgcacacgtctgcagg 173 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 63 cgccgcgaggcagctcgtcgaccgggccgtcggatccagggccgcgcacacgtccgcggg 122 Query: 174 cagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaaccccaa 233 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 cagcaagaagatcgtgggcgtgttctaccaggccggcgagtacgccgacaagaaccccaa 182 Query: 234 cttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaaggggca 293 |||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 183 cttcgtcggctgtgttgagggggccctcggcatacgcgactggctcgagtccaaggggca 242 Query: 294 ccactacattgtcaccgacgacaaggaggggttgaacagcgagctggagaagcacattga 353 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tcactacattgtcaccgacgacaaggaggggttgaacagcgagctggagaagcacattga 302 Query: 354 agacatgcatgtcctgataaccaccccattccacccagcctatgttactgcagagaggat 413 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 agacatgcatgttctgataaccaccccattccacccagcctatgttactgcagagaggat 362 Query: 414 caagaaggcaaagaacctcgagctgcttctcacagctgggattggctcggaccatattga 473 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 363 caagaaggcaaagaacctcgagctgcttctcacagctgggattggctcagaccatattga 422 Query: 474 tttgccagctgctgctgctgcaggcttgactgtggcagaggtcactggaagtaacaccgt 533 |||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||| || Sbjct: 423 tttgccagctgctgctgctgcaggcttgacagtggctgaggttactgggagtaacactgt 482 Query: 534 ctctgtggcagaagatgagctcatgcgcatcttgattctgctcangaac 582 |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 483 ctctgtggcagaagatgagctcatgcgcatcttgattctgctcaggaac 531
>dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048A01, full insert sequence Length = 1648 Score = 563 bits (284), Expect = e-157 Identities = 433/483 (89%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||| || ||| |||| || ||| ||| ||| |||| |||||||||||| Sbjct: 100 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 159 Query: 160 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 219 ||||| || |||||||||||||||||||| || ||||||||| ||| ||||||||||||| Sbjct: 160 cacacatcagcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgcc 219 Query: 220 gacaagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 279 |||||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||||| Sbjct: 220 gacaagaatcccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggctt 279 Query: 280 gagtccaaggggcaccactacattgtcaccgacgacaaggaggggttgaacagcgagctg 339 |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 280 gagtccaaggggcatcactacattgtcaccgacgacaaggaggggctaaacagcgagctg 339 Query: 340 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 399 |||||||||||||| || ||||||||| |||| |||||||| |||||||||||||||||| Sbjct: 340 gagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcctatgtt 399 Query: 400 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 459 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 agcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggg 459 Query: 460 tcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagaggtcact 519 || || ||||||||| ||||||| |||||||| ||||| || |||||||||||||| || Sbjct: 460 tcagatcatattgatctgccagcagctgctgcagcaggtttaactgtggcagaggttacc 519 Query: 520 ggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctgctcang 579 ||||||||||| || || |||||||||||||||||||||||||| |||||| |||||| | Sbjct: 520 ggaagtaacactgtgtcggtggcagaagatgagctcatgcgcattttgattttgctcagg 579 Query: 580 aac 582 ||| Sbjct: 580 aac 582
>dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehydrogenase, complete cds Length = 1449 Score = 563 bits (284), Expect = e-157 Identities = 433/483 (89%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||| || ||| |||| || ||| ||| ||| |||| |||||||||||| Sbjct: 103 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 162 Query: 160 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 219 ||||| || |||||||||||||||||||| || ||||||||| ||| ||||||||||||| Sbjct: 163 cacacatcagcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgcc 222 Query: 220 gacaagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 279 |||||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||||| Sbjct: 223 gacaagaatcccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggctt 282 Query: 280 gagtccaaggggcaccactacattgtcaccgacgacaaggaggggttgaacagcgagctg 339 |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 283 gagtccaaggggcatcactacattgtcaccgacgacaaggaggggctaaacagcgagctg 342 Query: 340 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 399 |||||||||||||| || ||||||||| |||| |||||||| |||||||||||||||||| Sbjct: 343 gagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcctatgtt 402 Query: 400 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 459 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 agcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggg 462 Query: 460 tcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagaggtcact 519 || || ||||||||| ||||||| |||||||| ||||| || |||||||||||||| || Sbjct: 463 tcagatcatattgatctgccagcagctgctgcagcaggtttaactgtggcagaggttacc 522 Query: 520 ggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctgctcang 579 ||||||||||| || || |||||||||||||||||||||||||| |||||| |||||| | Sbjct: 523 ggaagtaacactgtgtcggtggcagaagatgagctcatgcgcattttgattttgctcagg 582 Query: 580 aac 582 ||| Sbjct: 583 aac 585
>dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E04, full insert sequence Length = 1637 Score = 555 bits (280), Expect = e-155 Identities = 432/483 (89%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||| || ||| |||| || ||| ||| ||| |||| |||||||||||| Sbjct: 89 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 148 Query: 160 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 219 ||||| || |||||||||||||||||||| || ||||||||| ||| ||||||||||||| Sbjct: 149 cacacatcagcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgcc 208 Query: 220 gacaagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 279 |||||||| |||||||||||||||||||| ||||| || |||||||| ||||| ||||| Sbjct: 209 gacaagaatcccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggctt 268 Query: 280 gagtccaaggggcaccactacattgtcaccgacgacaaggaggggttgaacagcgagctg 339 |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 269 gagtccaaggggcatcactacattgtcaccgacgacaaggaggggctaaacagcgagctg 328 Query: 340 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 399 |||||||||||||| || ||||||||| |||| |||||||| |||||||||||||||||| Sbjct: 329 gagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcctatgtt 388 Query: 400 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 459 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 agcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggg 448 Query: 460 tcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagaggtcact 519 || || ||||||||| ||||||| |||||||| ||||| || |||||||||||||| || Sbjct: 449 tcagatcatattgatctgccagcagctgctgcagcaggtttaactgtggcagaggttacc 508 Query: 520 ggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctgctcang 579 ||||||||||| || || ||||||||||||||||||||||||| |||||| |||||| | Sbjct: 509 ggaagtaacactgtgtcgatggcagaagatgagctcatgcgcattttgattttgctcagg 568 Query: 580 aac 582 ||| Sbjct: 569 aac 571
>gb|BT016309.1| Zea mays clone Contig142 mRNA sequence Length = 1507 Score = 523 bits (264), Expect = e-145 Identities = 428/483 (88%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||||||||| |||||||| |||||||||||| |||| || ||||||||| Sbjct: 102 gcgatgtggagggccgccgctaggcagctggtcgaccgggcgctcggctcaagggccgcg 161 Query: 160 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 219 ||||||||| |||||||||| ||||| ||||| ||||||||| ||||||| ||||| ||| Sbjct: 162 cacacgtctacaggcagcaaaaagatagtcggggtgttctacaaggccggggagtatgcc 221 Query: 220 gacaagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 279 |||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct: 222 gacaagaaccccaacttcgtcggctgcgtcgagggtgcactcggcatccgcggctggctc 281 Query: 280 gagtccaaggggcaccactacattgtcaccgacgacaaggaggggttgaacagcgagctg 339 ||||| |||| || || |||||||||||||| |||||||| || ||| | || ||| Sbjct: 282 gagtcgcagggccatcaatacattgtcaccgatgacaaggaaggccccaactgtgaactg 341 Query: 340 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 399 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 342 gagaagcacattgaagacatgcatgtcctgattaccaccccattccacccagcttatgtc 401 Query: 400 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 459 |||||||||||||| |||||||| ||||| || ||||| |||||||| || || || ||| Sbjct: 402 actgcagagaggataaagaaggcgaagaatcttgagcttcttctcacggcaggaatcggc 461 Query: 460 tcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagaggtcact 519 || || ||||||||| | ||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 462 tccgatcatattgatcttccagcagctgctgctgcgggcttaactgtggctgaggtcact 521 Query: 520 ggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctgctcang 579 ||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||| | Sbjct: 522 ggaagcaacactgtctctgtggcagaagatgagctcttgcgcattctgattctgctcagg 581 Query: 580 aac 582 ||| Sbjct: 582 aac 584
>gb|AY111955.1| Zea mays CL15209_1 mRNA sequence Length = 1667 Score = 410 bits (207), Expect = e-111 Identities = 333/375 (88%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||||||||| |||||||| |||||||||||| |||| || ||||||||| Sbjct: 107 gcgatgtggagggccgccgctaggcagctggtcgaccgggcgctcggctcaagggccgcg 166 Query: 160 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 219 ||||||||| |||||||||||||||| ||||| ||||||||| ||||||| ||||| ||| Sbjct: 167 cacacgtctacaggcagcaagaagatagtcggggtgttctacaaggccggggagtatgcc 226 Query: 220 gacaagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 279 |||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct: 227 gacaagaaccccaacttcgtcggctgcgtcgagggtgcactcggcatccgcggctggctc 286 Query: 280 gagtccaaggggcaccactacattgtcaccgacgacaaggaggggttgaacagcgagctg 339 ||||| |||| || || |||||||||||||| |||||||| || ||| | || ||| Sbjct: 287 gagtcgcagggccatcagtacattgtcaccgatgacaaggaaggccccaactgtgaactg 346 Query: 340 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 399 |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 347 gagaagcacattgaagacatgcatgtcctgattaccaccccattccacccagcttatgtc 406 Query: 400 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 459 |||||||||||||| |||||||| ||||| || ||||| |||||||| || || || ||| Sbjct: 407 actgcagagaggataaagaaggcgaagaatcttgagcttcttctcacggcaggaatcggc 466 Query: 460 tcggaccatattgat 474 || || ||||||||| Sbjct: 467 tccgatcatattgat 481 Score = 95.6 bits (48), Expect = 2e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 512 aggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattc 571 ||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct: 519 aggtcactggaagcaacactgtctctgtggcagaagatgagctcttgcgcattctgattc 578 Query: 572 tgctcangaac 582 |||||| |||| Sbjct: 579 tgctcaggaac 589
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 305 bits (154), Expect = 9e-80 Identities = 225/249 (90%) Strand = Plus / Plus Query: 334 gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 393 |||||||||||||||||||| || ||||||||| |||| |||||||| |||||||||||| Sbjct: 16432791 gagctggagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcc 16432850 Query: 394 tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 453 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16432851 tatgttagcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 16432910 Query: 454 attggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagag 513 ||||| || || ||||||||| ||||||| |||||||| ||||| || |||||||||||| Sbjct: 16432911 attgggtcagatcatattgatctgccagcagctgctgcagcaggtttaactgtggcagag 16432970 Query: 514 gtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctg 573 || || ||||||||||| || || |||||||||||||||||||||||||| |||||| || Sbjct: 16432971 gttaccggaagtaacactgtgtcggtggcagaagatgagctcatgcgcattttgattttg 16433030 Query: 574 ctcangaac 582 |||| |||| Sbjct: 16433031 ctcaggaac 16433039 Score = 218 bits (110), Expect = 2e-53 Identities = 152/166 (91%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 |||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| Sbjct: 16431987 gcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaat 16432046 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 |||||||||||||||||||| ||||| || |||||||| ||||| ||||| ||||||||| Sbjct: 16432047 cccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaag 16432106 Query: 289 gggcaccactacattgtcaccgacgacaaggaggggttgaacagcg 334 ||||| |||||||||||||||||||||||||||||| | ||||||| Sbjct: 16432107 gggcatcactacattgtcaccgacgacaaggaggggctaaacagcg 16432152 Score = 143 bits (72), Expect = 7e-31 Identities = 135/156 (86%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 ||||||||||||||| |||| || ||||||||| ||| |||||||| ||||||||||| Sbjct: 16461801 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcgagtatgccgacaagaat 16461860 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 ||||||||||||||||||||||| || |||||||| |||| |||||| || || ||| Sbjct: 16461861 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 16461920 Query: 289 gggcaccactacattgtcaccgacgacaaggagggg 324 ||||| | ||||||||||||||| |||||||||||| Sbjct: 16461921 gggcatcgctacattgtcaccgatgacaaggagggg 16461956 Score = 131 bits (66), Expect = 3e-27 Identities = 203/249 (81%) Strand = Plus / Plus Query: 334 gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 393 ||||||||||||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 16462620 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccacccagcc 16462679 Query: 394 tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 453 || | || |||||||||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 16462680 tacatcaccgcagagaggatcaagaaggccaagaacctggagcttcttctcacggccggg 16462739 Query: 454 attggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagag 513 | || || ||||| || ||| | ||||| || || || ||||| | || ||||| ||| Sbjct: 16462740 gtcgggtcagaccacatcgatctcccagcagccgcggcagcaggtctaaccgtggcggag 16462799 Query: 514 gtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctg 573 |||| || || ||||||||||| ||||| ||||| |||||||||||||| || |||| Sbjct: 16462800 atcaccggcagcaacaccgtctccgtggctgaagaccagctcatgcgcatcctgcttctt 16462859 Query: 574 ctcangaac 582 |||| |||| Sbjct: 16462860 ctcaggaac 16462868 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||| || ||| |||| || ||| ||| ||| |||| |||||||||||| Sbjct: 16431506 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 16431565 Query: 160 cac 162 ||| Sbjct: 16431566 cac 16431568
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 305 bits (154), Expect = 9e-80 Identities = 225/249 (90%) Strand = Plus / Plus Query: 334 gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 393 |||||||||||||||||||| || ||||||||| |||| |||||||| |||||||||||| Sbjct: 42109 gagctggagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcc 42168 Query: 394 tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 453 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42169 tatgttagcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 42228 Query: 454 attggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagag 513 ||||| || || ||||||||| ||||||| |||||||| ||||| || |||||||||||| Sbjct: 42229 attgggtcagatcatattgatctgccagcagctgctgcagcaggtttaactgtggcagag 42288 Query: 514 gtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctg 573 || || ||||||||||| || || |||||||||||||||||||||||||| |||||| || Sbjct: 42289 gttaccggaagtaacactgtgtcggtggcagaagatgagctcatgcgcattttgattttg 42348 Query: 574 ctcangaac 582 |||| |||| Sbjct: 42349 ctcaggaac 42357 Score = 218 bits (110), Expect = 2e-53 Identities = 152/166 (91%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 |||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| Sbjct: 41305 gcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaat 41364 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 |||||||||||||||||||| ||||| || |||||||| ||||| ||||| ||||||||| Sbjct: 41365 cccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaag 41424 Query: 289 gggcaccactacattgtcaccgacgacaaggaggggttgaacagcg 334 ||||| |||||||||||||||||||||||||||||| | ||||||| Sbjct: 41425 gggcatcactacattgtcaccgacgacaaggaggggctaaacagcg 41470 Score = 143 bits (72), Expect = 7e-31 Identities = 135/156 (86%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 ||||||||||||||| |||| || ||||||||| ||| |||||||| ||||||||||| Sbjct: 71119 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcgagtatgccgacaagaat 71178 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 ||||||||||||||||||||||| || |||||||| |||| |||||| || || ||| Sbjct: 71179 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 71238 Query: 289 gggcaccactacattgtcaccgacgacaaggagggg 324 ||||| | ||||||||||||||| |||||||||||| Sbjct: 71239 gggcatcgctacattgtcaccgatgacaaggagggg 71274 Score = 131 bits (66), Expect = 3e-27 Identities = 203/249 (81%) Strand = Plus / Plus Query: 334 gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 393 ||||||||||||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 71938 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccacccagcc 71997 Query: 394 tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 453 || | || |||||||||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 71998 tacatcaccgcagagaggatcaagaaggccaagaacctggagcttcttctcacggccggg 72057 Query: 454 attggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagag 513 | || || ||||| || ||| | ||||| || || || ||||| | || ||||| ||| Sbjct: 72058 gtcgggtcagaccacatcgatctcccagcagccgcggcagcaggtctaaccgtggcggag 72117 Query: 514 gtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctg 573 |||| || || ||||||||||| ||||| ||||| |||||||||||||| || |||| Sbjct: 72118 atcaccggcagcaacaccgtctccgtggctgaagaccagctcatgcgcatcctgcttctt 72177 Query: 574 ctcangaac 582 |||| |||| Sbjct: 72178 ctcaggaac 72186 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||| || ||| |||| || ||| ||| ||| |||| |||||||||||| Sbjct: 40824 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 40883 Query: 160 cac 162 ||| Sbjct: 40884 cac 40886
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 305 bits (154), Expect = 9e-80 Identities = 225/249 (90%) Strand = Plus / Plus Query: 334 gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 393 |||||||||||||||||||| || ||||||||| |||| |||||||| |||||||||||| Sbjct: 109354 gagctggagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcc 109413 Query: 394 tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 453 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109414 tatgttagcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 109473 Query: 454 attggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagag 513 ||||| || || ||||||||| ||||||| |||||||| ||||| || |||||||||||| Sbjct: 109474 attgggtcagatcatattgatctgccagcagctgctgcagcaggtttaactgtggcagag 109533 Query: 514 gtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctg 573 || || ||||||||||| || || |||||||||||||||||||||||||| |||||| || Sbjct: 109534 gttaccggaagtaacactgtgtcggtggcagaagatgagctcatgcgcattttgattttg 109593 Query: 574 ctcangaac 582 |||| |||| Sbjct: 109594 ctcaggaac 109602 Score = 218 bits (110), Expect = 2e-53 Identities = 152/166 (91%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 |||||||||||||||||||| || ||||||||| ||| ||||||||||||||||||||| Sbjct: 108550 gcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaat 108609 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 |||||||||||||||||||| ||||| || |||||||| ||||| ||||| ||||||||| Sbjct: 108610 cccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaag 108669 Query: 289 gggcaccactacattgtcaccgacgacaaggaggggttgaacagcg 334 ||||| |||||||||||||||||||||||||||||| | ||||||| Sbjct: 108670 gggcatcactacattgtcaccgacgacaaggaggggctaaacagcg 108715 Score = 143 bits (72), Expect = 7e-31 Identities = 135/156 (86%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 ||||||||||||||| |||| || ||||||||| ||| |||||||| ||||||||||| Sbjct: 138364 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcgagtatgccgacaagaat 138423 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 ||||||||||||||||||||||| || |||||||| |||| |||||| || || ||| Sbjct: 138424 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 138483 Query: 289 gggcaccactacattgtcaccgacgacaaggagggg 324 ||||| | ||||||||||||||| |||||||||||| Sbjct: 138484 gggcatcgctacattgtcaccgatgacaaggagggg 138519 Score = 131 bits (66), Expect = 3e-27 Identities = 203/249 (81%) Strand = Plus / Plus Query: 334 gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 393 ||||||||||||||||| || || || |||||||| ||||||||||||||||||||| Sbjct: 139183 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccacccagcc 139242 Query: 394 tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 453 || | || |||||||||||||||||||| |||||||| ||||| |||||||| || ||| Sbjct: 139243 tacatcaccgcagagaggatcaagaaggccaagaacctggagcttcttctcacggccggg 139302 Query: 454 attggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggcagag 513 | || || ||||| || ||| | ||||| || || || ||||| | || ||||| ||| Sbjct: 139303 gtcgggtcagaccacatcgatctcccagcagccgcggcagcaggtctaaccgtggcggag 139362 Query: 514 gtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgattctg 573 |||| || || ||||||||||| ||||| ||||| |||||||||||||| || |||| Sbjct: 139363 atcaccggcagcaacaccgtctccgtggctgaagaccagctcatgcgcatcctgcttctt 139422 Query: 574 ctcangaac 582 |||| |||| Sbjct: 139423 ctcaggaac 139431 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 100 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 159 |||||||||||||| || ||| |||| || ||| ||| ||| |||| |||||||||||| Sbjct: 108069 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 108128 Query: 160 cac 162 ||| Sbjct: 108129 cac 108131
>dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B06, full insert sequence Length = 1872 Score = 260 bits (131), Expect = 5e-66 Identities = 343/414 (82%) Strand = Plus / Plus Query: 169 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacaagaac 228 ||||||||||||||| |||| || ||||||||| ||| ||| |||| ||||||||||| Sbjct: 627 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcaagtatgccgacaagaat 686 Query: 229 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 288 ||||||||||||||||||||||| || |||||||| |||| |||||| || || ||| Sbjct: 687 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 746 Query: 289 gggcaccactacattgtcaccgacgacaaggaggggttgaacagcgagctggagaagcac 348 ||||| | ||||||||||||||| |||||||||||| | ||| ||||||||||||||||| Sbjct: 747 gggcatcgctacattgtcaccgatgacaaggaggggataaactgcgagctggagaagcac 806 Query: 349 attgaagacatgcatgtcctgataaccaccccattccacccagcctatgttactgcagag 408 || || || || |||||||| ||||||||||||||||||||||| | || |||||| Sbjct: 807 atcgaggatgcccacgtcctgatcaccaccccattccacccagcctacatcaccgcagag 866 Query: 409 aggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggctcggaccat 468 |||||||||||||| |||||||| ||||| |||||||| || ||| | || || ||||| Sbjct: 867 aggatcaagaaggccaagaacctggagcttcttctcacggccggggtcgggtcagaccac 926 Query: 469 attgatttgccagctgctgctgctgcaggcttgactgtggcagaggtcactggaagtaac 528 || ||| | ||||| || || || ||||| | || ||||| ||| |||| || || ||| Sbjct: 927 atcgatctcccagcagccgcggcagcaggtctaaccgtggcggagatcaccggcagcaac 986 Query: 529 accgtctctgtggcagaagatgagctcatgcgcatcttgattctgctcangaac 582 |||||||| ||||| ||||| |||||||||||||| || |||| |||| |||| Sbjct: 987 accgtctccgtggctgaagaccagctcatgcgcatcctgcttcttctcaggaac 1040
>gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, partial cds Length = 597 Score = 151 bits (76), Expect = 3e-33 Identities = 120/135 (88%) Strand = Plus / Plus Query: 448 gctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtg 507 ||||| |||||||| || ||||||||| | ||||| ||||||||||| ||||| |||||| Sbjct: 1 gctggaattggctcagatcatattgatcttccagcagctgctgctgcgggcttaactgtg 60 Query: 508 gcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttg 567 || |||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || Sbjct: 61 gctgaggtcactggaagcaacactgtctctgtggcagaagatgagctcttgcgcattctg 120 Query: 568 attctgctcangaac 582 |||||||||| |||| Sbjct: 121 attctgctcaggaac 135
>emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrogenase (ORF1) Length = 1513 Score = 107 bits (54), Expect = 4e-20 Identities = 162/198 (81%) Strand = Plus / Plus Query: 361 catgtcctgataaccaccccattccacccagcctatgttactgcagagaggatcaagaag 420 ||||| || ||||| ||||| ||||| || ||||||||||| || || ||||||| |||| Sbjct: 369 catgttctcataactacccccttccatccggcctatgttacggctgaaaggatcacgaag 428 Query: 421 gcaaagaacctcgagctgcttctcacagctgggattggctcggaccatattgatttgcca 480 || ||||| || | |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 429 gccaagaatctgcaattgctgctcacagctggaattggttctgatcatattgatttgcct 488 Query: 481 gctgctgctgctgcaggcttgactgtggcagaggtcactggaagtaacaccgtctctgtg 540 |||||||||||||| || || || || ||||||||||| ||||| || || || || Sbjct: 489 gctgctgctgctgctggattaacagtcgcagaggtcacgggaagcaatgtagtttcagtt 548 Query: 541 gcagaagatgagctcatg 558 |||||||||||||||||| Sbjct: 549 gcagaagatgagctcatg 566
>emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydrogenase Length = 1262 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 391 gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 450 |||||||| || || || ||||||||||||||||| || || | || || || |||||| Sbjct: 315 gcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaactactgctgacagct 374 Query: 451 gggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggca 510 || ||||| || || ||| ||||| || ||||||||||||||| || ||||| |||||| Sbjct: 375 ggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtggca 434 Query: 511 gaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgatt 570 || ||||||||||| || || ||||| || || |||||||| || ||||| ||||| ||| Sbjct: 435 gaagtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaatt 494 Query: 571 ct 572 || Sbjct: 495 ct 496
>emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydrogenase (fdh gene) Length = 1572 Score = 91.7 bits (46), Expect = 2e-15 Identities = 148/182 (81%) Strand = Plus / Plus Query: 391 gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 450 |||||||| || || || ||||||||||||||||| || || | || || || |||||| Sbjct: 459 gcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagct 518 Query: 451 gggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggca 510 || ||||| || || ||| ||||| || ||||||||||||||| || ||||| || ||| Sbjct: 519 ggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagca 578 Query: 511 gaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgatt 570 |||||||||||||| || || ||||| || || |||||||| || ||||| ||||| ||| Sbjct: 579 gaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaatt 638 Query: 571 ct 572 || Sbjct: 639 ct 640
>gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1494 Score = 89.7 bits (45), Expect = 1e-14 Identities = 144/177 (81%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 365 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 424 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||||||||| ||| || Sbjct: 425 ctcacagctggtattggctcggatcatattgatctccaggcagctgctgctgctggcctg 484 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 485 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 541
>emb|Z99993.1|STZ99993 Solanum tuberosum fdh2 gene encoding formate dehydrogenase Length = 1275 Score = 83.8 bits (42), Expect = 6e-13 Identities = 147/182 (80%) Strand = Plus / Plus Query: 391 gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 450 |||||||| || || || |||||| |||||||||| || || | || || || |||||| Sbjct: 977 gcctatgtcacggctgaaaggatctagaaggcaaaaaatctacaactactgctgacagct 1036 Query: 451 gggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggca 510 || ||||| || || ||| ||||| || ||||||||||||||| || ||||| || ||| Sbjct: 1037 ggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagca 1096 Query: 511 gaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgatt 570 |||||||||||||| || || ||||| || || |||||||| || ||||| ||||| ||| Sbjct: 1097 gaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaatt 1156 Query: 571 ct 572 || Sbjct: 1157 ct 1158
>ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE); oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT5G14780 (FDH) mRNA, complete cds Length = 1518 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 369 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 428 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 429 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 488 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 489 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 545
>emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC clone T9L3 (ESSA project) Length = 89370 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 45227 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 45286 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 45287 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 45346 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 45347 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 45403
>gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1155 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 310 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 369 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 370 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 429 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 430 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 486
>gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1B (FDH1B) mRNA, complete cds Length = 1508 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 359 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 418 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 419 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 478 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 479 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 535
>gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1A (FDH1A) mRNA, complete cds Length = 1439 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 367 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 426 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 427 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 486 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 487 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 543
>gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1443 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 369 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 428 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 429 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 488 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 489 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 545
>dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydrogenase, complete cds Length = 1381 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 310 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 369 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 370 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 429 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 430 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 486
>gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenase (FDH) mRNA, complete cds Length = 1490 Score = 81.8 bits (41), Expect = 2e-12 Identities = 143/177 (80%) Strand = Plus / Plus Query: 382 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 441 |||||||| || ||||| ||||| || || |||||||| || || ||| | |||| || Sbjct: 369 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 428 Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 429 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 488 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 489 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 545
>emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding formate dehydrogenase Length = 4392 Score = 75.8 bits (38), Expect = 1e-10 Identities = 146/182 (80%) Strand = Plus / Plus Query: 391 gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 450 |||||||| || || || |||||| |||||||||| || || | || || || |||||| Sbjct: 2352 gcctatgtcacggctgaaaggatctagaaggcaaaaaatctacaactactgctgacagct 2411 Query: 451 gggattggctcggaccatattgatttgccagctgctgctgctgcaggcttgactgtggca 510 || ||||| || || ||| ||||| || ||||||||||||||| || ||||| || ||| Sbjct: 2412 ggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagca 2471 Query: 511 gaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatgcgcatcttgatt 570 |||| ||||||||| || || ||||| || || |||||||| || ||||| ||||| ||| Sbjct: 2472 gaggccactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaatt 2531 Query: 571 ct 572 || Sbjct: 2532 ct 2533
>gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete sequence Length = 1514 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 442 ctcacagctgggattggctcggaccatattgatttgccagctgctgctgctgcaggcttg 501 ||||||||||| ||||||||||| ||||||||| | | || ||||| ||||| ||| || Sbjct: 429 ctcacagctggtattggctcggatcatattgatctccaggcagctgcagctgctggcctg 488 Query: 502 actgtggcagaggtcactggaagtaacaccgtctctgtggcagaagatgagctcatg 558 || || || || ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct: 489 acggttgctgaagtcacgggaagcaacgtggtctcagtggcagaagatgagctcatg 545
>emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1428 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 442 ctcacagctgggattggctcggaccatattgat 474 ||||||||||| ||||||||||| ||||||||| Sbjct: 415 ctcacagctggtattggctcggatcatattgat 447
>ref|XM_466474.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1251 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 gcagagaggatcaagaaggcaa 424 |||||||||||||||||||||| Sbjct: 268 gcagagaggatcaagaaggcaa 289
>ref|XM_466475.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1799 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 gcagagaggatcaagaaggcaa 424 |||||||||||||||||||||| Sbjct: 719 gcagagaggatcaagaaggcaa 698
>gb|AC158603.6| Mus musculus 10 BAC RP24-466C12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149929 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 371 taaccaccccattccacccagc 392 |||||||||||||||||||||| Sbjct: 120743 taaccaccccattccacccagc 120722
>emb|AJ300721.1|PPI300721 Pinus pinaster partial mRNA for putative NAD-dependent formate dehydrogenase Length = 989 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 538 gtggcagaagatgagctcatgcgcat 563 ||||||||||||||||| |||||||| Sbjct: 50 gtggcagaagatgagctaatgcgcat 75
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 gcagagaggatcaagaaggcaa 424 |||||||||||||||||||||| Sbjct: 22844457 gcagagaggatcaagaaggcaa 22844436
>gb|AC098812.3| Papio anubis clone RP41-440G22, complete sequence Length = 171720 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 494 caggcttgactgtggcagaggt 515 |||||||||||||||||||||| Sbjct: 77346 caggcttgactgtggcagaggt 77325
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 gcagagaggatcaagaaggcaa 424 |||||||||||||||||||||| Sbjct: 77795 gcagagaggatcaagaaggcaa 77774
>dbj|AK100917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133E20, full insert sequence Length = 5035 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 gcagagaggatcaagaaggcaa 424 |||||||||||||||||||||| Sbjct: 3286 gcagagaggatcaagaaggcaa 3265
>dbj|AK068984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003M09, full insert sequence Length = 1798 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 gcagagaggatcaagaaggcaa 424 |||||||||||||||||||||| Sbjct: 719 gcagagaggatcaagaaggcaa 698
>emb|AL808012.13| Mouse DNA sequence from clone RP23-451N14 on chromosome X, complete sequence Length = 116926 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 478 ccagctgctgctgctgcaggct 499 |||||||||||||||||||||| Sbjct: 36294 ccagctgctgctgctgcaggct 36273
>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete sequence Length = 73587 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 484 gctgctgctgcaggcttgactgtggcagaggtcactggaag 524 ||||||||| | || ||||| || ||||||||||||||||| Sbjct: 62227 gctgctgctactggattgacagtagcagaggtcactggaag 62187
>gb|AC102115.11| Mus musculus chromosome 3, clone RP23-145A18, complete sequence Length = 184436 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 gctgctgctgctgcaggcttg 501 ||||||||||||||||||||| Sbjct: 69082 gctgctgctgctgcaggcttg 69062
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 agatcgtcggcgtgttctaccaggc 206 ||||||||||||||||| ||||||| Sbjct: 5442453 agatcgtcggcgtgttcaaccaggc 5442429
>gb|AC158353.3| Mus musculus chromosome 8, clone RP24-363C18, complete sequence Length = 161841 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 tggagaagcacattgaagaca 358 ||||||||||||||||||||| Sbjct: 17043 tggagaagcacattgaagaca 17063
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 cgccgcgaggcagctcgtcgaccgg 138 |||||||| |||||||||||||||| Sbjct: 3787866 cgccgcgatgcagctcgtcgaccgg 3787842
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 ccaggccggcgagtacgccga 221 ||||||||||||||||||||| Sbjct: 37859 ccaggccggcgagtacgccga 37879
>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence Length = 234778 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 tggagaagcacattgaagaca 358 ||||||||||||||||||||| Sbjct: 28294 tggagaagcacattgaagaca 28274
>gb|AC110085.3| Homo sapiens BAC clone RP11-603P13 from 4, complete sequence Length = 80015 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 536 ctgtggcagaagatgagctca 556 ||||||||||||||||||||| Sbjct: 41097 ctgtggcagaagatgagctca 41117
>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR48D02, complete sequence Length = 181728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 tttgccagctgctgctgctgc 494 ||||||||||||||||||||| Sbjct: 101849 tttgccagctgctgctgctgc 101869
>ref|XM_216791.3| PREDICTED: Rattus norvegicus similar to [Mouse primary response gene B94 mRNA, 3end.], gene product (LOC299339), mRNA Length = 2996 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 tttgccagctgctgctgctgc 494 ||||||||||||||||||||| Sbjct: 2045 tttgccagctgctgctgctgc 2025
>emb|AJ004829.1|STAJ4829 Solanum tuberosum fdh3 pseudogene Length = 5868 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 484 gctgctgctgcaggcttgactgtggcagaggtcactggaag 524 ||||||||| | || ||||| || ||||||||||||||||| Sbjct: 4127 gctgctgctactggattgacagtagcagaggtcactggaag 4167
>gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, region 24D3-24D5, P1 clone DS04766, complete sequence Length = 64879 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 tttgccagctgctgctgctgc 494 ||||||||||||||||||||| Sbjct: 50313 tttgccagctgctgctgctgc 50333
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 tttgccagctgctgctgctgc 494 ||||||||||||||||||||| Sbjct: 22609 tttgccagctgctgctgctgc 22629
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cgtgttctaccaggccggcg 211 |||||||||||||||||||| Sbjct: 5775 cgtgttctaccaggccggcg 5794
>ref|NM_197162.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein (OSJNBa0066I08.3), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 ccagctgctgctgctgcagg 497 |||||||||||||||||||| Sbjct: 594 ccagctgctgctgctgcagg 575
>ref|XM_516862.1| PREDICTED: Pan troglodytes similar to golgi phosphoprotein 4; type II Golgi membrane protein; 130 kDa golgi-localized phosphoprotein; cis Golgi-localized calcium-binding protein (LOC460835), mRNA Length = 2145 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1417 ttgccagctgctgctgctgc 1398
>gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, complete sequence Length = 220872 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gtctgcaggcagcaagaaga 184 |||||||||||||||||||| Sbjct: 58088 gtctgcaggcagcaagaaga 58069
>gb|U64851.1| Caenorhabditis elegans cosmid F28A12, complete sequence Length = 26711 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 26500 ttgccagctgctgctgctgc 26519
>ref|XM_608486.2| PREDICTED: Bos taurus similar to Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor) (CAIN) (LOC530023), partial mRNA Length = 3216 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ccagctgctgctgctgcagg 497 |||||||||||||||||||| Sbjct: 2688 ccagctgctgctgctgcagg 2707
>ref|NM_009396.1| Mus musculus tumor necrosis factor, alpha-induced protein 2 (Tnfaip2), mRNA Length = 3512 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1744 ttgccagctgctgctgctgc 1725
>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence Length = 202934 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgtcctgataaccaccccat 382 |||||||||||||||||||| Sbjct: 103422 tgtcctgataaccaccccat 103403
>gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome 9, complete sequence Length = 247463 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cctccgccgggatccctccg 88 |||||||||||||||||||| Sbjct: 41150 cctccgccgggatccctccg 41131
>ref|XM_001004343.1| PREDICTED: Mus musculus pleckstrin homology domain interacting protein (Phip), mRNA Length = 10936 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cctccgccgggatccctccg 88 |||||||||||||||||||| Sbjct: 520 cctccgccgggatccctccg 501
>ref|XM_543529.2| PREDICTED: Canis familiaris similar to Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor) (CAIN) (LOC486403), mRNA Length = 6935 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ccagctgctgctgctgcagg 497 |||||||||||||||||||| Sbjct: 2217 ccagctgctgctgctgcagg 2236
>ref|XM_543055.2| PREDICTED: Canis familiaris similar to sal-like 4 (LOC485931), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 cagctgctgctgctgcaggc 498 |||||||||||||||||||| Sbjct: 678 cagctgctgctgctgcaggc 659
>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete sequence Length = 202976 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 cagctgctgctgctgcaggc 498 |||||||||||||||||||| Sbjct: 38511 cagctgctgctgctgcaggc 38492
>gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosome 9, complete sequence Length = 200985 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cctccgccgggatccctccg 88 |||||||||||||||||||| Sbjct: 79062 cctccgccgggatccctccg 79043
>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence Length = 179390 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 53791 ttgccagctgctgctgctgc 53810
>gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, complete sequence Length = 227330 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gtctgcaggcagcaagaaga 184 |||||||||||||||||||| Sbjct: 225943 gtctgcaggcagcaagaaga 225924
>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome Length = 324746 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ctgcagagaggatcaagaag 420 |||||||||||||||||||| Sbjct: 271910 ctgcagagaggatcaagaag 271929
>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence Length = 225128 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctccgccgggatccctccg 88 |||||||||||||||||||| Sbjct: 34987 cctccgccgggatccctccg 35006
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 cggctgcgtcgagggtgccctcgg 263 |||| ||||||||||||||||||| Sbjct: 89505 cggcggcgtcgagggtgccctcgg 89528
>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete sequence Length = 199961 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 38297 ttgccagctgctgctgctgc 38278
>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 67732 ttgccagctgctgctgctgc 67713
>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence Length = 173677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 gcagaagatgagctcatgcg 560 |||||||||||||||||||| Sbjct: 162894 gcagaagatgagctcatgcg 162875
>gb|AC087369.5| Homo sapiens chromosome 8, clone RP11-728L1, complete sequence Length = 193872 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 gcagaagatgagctcatgcg 560 |||||||||||||||||||| Sbjct: 161444 gcagaagatgagctcatgcg 161463
>gb|AE009847.1|AE009847 Pyrobaculum aerophilum strain IM2 section 102 of 201 of the complete genome Length = 10528 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 tcgtcggcgtgttctaccag 204 |||||||||||||||||||| Sbjct: 7224 tcgtcggcgtgttctaccag 7205
>dbj|AK154405.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630027K13 product:tumor necrosis factor, alpha-induced protein 2, full insert sequence Length = 3569 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1800 ttgccagctgctgctgctgc 1781
>dbj|AK154155.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630005C12 product:tumor necrosis factor, alpha-induced protein 2, full insert sequence Length = 3284 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1854 ttgccagctgctgctgctgc 1835
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 ctgcagagaggatcaagaag 420 |||||||||||||||||||| Sbjct: 894018 ctgcagagaggatcaagaag 893999
>dbj|AK170719.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630116C17 product:tumor necrosis factor, alpha-induced protein 2, full insert sequence Length = 3570 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1800 ttgccagctgctgctgctgc 1781
>dbj|AK172653.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830225D24 product:tumor necrosis factor, alpha-induced protein 2, full insert sequence Length = 2575 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1800 ttgccagctgctgctgctgc 1781
>emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene Length = 24391 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 11199 ttgccagctgctgctgctgc 11218
>dbj|AK032797.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720454M04 product:neuronal differentiation related protein, full insert sequence Length = 2495 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cctccgccgggatccctccg 88 |||||||||||||||||||| Sbjct: 32 cctccgccgggatccctccg 13
>gb|BC008165.1| Mus musculus tumor necrosis factor, alpha-induced protein 2, mRNA (cDNA clone IMAGE:3709243), partial cds Length = 2083 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 298 ttgccagctgctgctgctgc 279
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gcagctcgtcgaccgggcggtcgg 146 ||||||||||||||| |||||||| Sbjct: 152427 gcagctcgtcgaccgcgcggtcgg 152450
>gb|AC158609.10| Mus musculus 6 BAC RP24-89F5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ctgctgctgctgcaggcttg 501 |||||||||||||||||||| Sbjct: 39039 ctgctgctgctgcaggcttg 39058
>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198476 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ctgctgctgctgcaggcttg 501 |||||||||||||||||||| Sbjct: 43833 ctgctgctgctgcaggcttg 43814
>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR13P06, complete sequence Length = 180699 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gaacagcgagctggagaagc 346 |||||||||||||||||||| Sbjct: 109559 gaacagcgagctggagaagc 109540
>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR39E09, complete sequence Length = 163990 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gaacagcgagctggagaagc 346 |||||||||||||||||||| Sbjct: 153384 gaacagcgagctggagaagc 153365
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgacgacaaggaggggttga 328 |||||||||||||||||||| Sbjct: 17906586 cgacgacaaggaggggttga 17906605
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 caacttcgtcggctgcgtcgaggg 254 |||||||||||||| ||||||||| Sbjct: 2152799 caacttcgtcggcttcgtcgaggg 2152776
>gb|AC005258.2|AC005258 Homo sapiens chromosome 19, cosmid R30783 (LLNLR-269E7) and 3' overlapping PCR product, complete sequence Length = 42559 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 agctgctgctgctgcaggct 499 |||||||||||||||||||| Sbjct: 36408 agctgctgctgctgcaggct 36427
>gb|AC069211.15| Homo sapiens 3 BAC RP11-509E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107467 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tctgcaggcagcaagaagat 185 |||||||||||||||||||| Sbjct: 80768 tctgcaggcagcaagaagat 80787
>ref|XM_341389.2| PREDICTED: Rattus norvegicus retinoic acid induced 17 (predicted) (Rai17_predicted), mRNA Length = 3255 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 gccagctgctgctgctgcag 496 |||||||||||||||||||| Sbjct: 888 gccagctgctgctgctgcag 907
>ref|XM_340830.2| PREDICTED: Rattus norvegicus similar to BAZF (LOC360551), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gctgctgctgctgcaggctt 500 |||||||||||||||||||| Sbjct: 735 gctgctgctgctgcaggctt 716
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ctgcagagaggatcaagaag 420 |||||||||||||||||||| Sbjct: 1177396 ctgcagagaggatcaagaag 1177415
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 ctgcagagaggatcaagaag 420 |||||||||||||||||||| Sbjct: 1173802 ctgcagagaggatcaagaag 1173821
>dbj|AK201033.1| Mus musculus cDNA, clone:Y1G0136M06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021710, based on BLAT search Length = 327 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 307 ttgccagctgctgctgctgc 288
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 gctcgtcgaccgggcggtcg 145 |||||||||||||||||||| Sbjct: 2264292 gctcgtcgaccgggcggtcg 2264273
>gb|AE005078.1| Halobacterium sp. NRC-1 section 109 of 170 of the complete genome Length = 11449 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ggccggcgagtacgccgaca 223 |||||||||||||||||||| Sbjct: 5610 ggccggcgagtacgccgaca 5629
>gb|AC154631.2| Mus musculus BAC clone RP23-264F8 from 16, complete sequence Length = 201820 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 cagctgctgctgctgcaggc 498 |||||||||||||||||||| Sbjct: 57720 cagctgctgctgctgcaggc 57739
>gb|AC109199.10| Mus musculus chromosome 1, clone RP23-29D20, complete sequence Length = 194339 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 ctgcaggcttgactgtggca 510 |||||||||||||||||||| Sbjct: 102091 ctgcaggcttgactgtggca 102072
>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones DS06954 and DS05325, complete sequence Length = 135182 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gaacagcgagctggagaagc 346 |||||||||||||||||||| Sbjct: 35383 gaacagcgagctggagaagc 35402
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gaacagcgagctggagaagc 346 |||||||||||||||||||| Sbjct: 172046 gaacagcgagctggagaagc 172027
>gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome 12, complete sequence Length = 236266 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 67988 ttgccagctgctgctgctgc 67969
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgacgacaaggaggggttga 328 |||||||||||||||||||| Sbjct: 103341 cgacgacaaggaggggttga 103360
>gb|AC114921.5| Mus musculus BAC clone RP23-202P9 from 6, complete sequence Length = 207908 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ctgctgctgctgcaggcttg 501 |||||||||||||||||||| Sbjct: 113788 ctgctgctgctgcaggcttg 113769
>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence Length = 205543 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgtcctgataaccaccccat 382 |||||||||||||||||||| Sbjct: 163877 tgtcctgataaccaccccat 163858
>emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in linkage group 5, complete sequence Length = 195380 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 5974 ttgccagctgctgctgctgc 5993
>gb|L24118.1|MUSB94A Mouse primary response gene B94 mRNA, 3'end Length = 3512 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 ttgccagctgctgctgctgc 494 |||||||||||||||||||| Sbjct: 1744 ttgccagctgctgctgctgc 1725
>emb|AL117209.7|CNS01DRH Human chromosome 14 DNA sequence BAC R-365N19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159602 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ctgctgctgctgcaggcttg 501 |||||||||||||||||||| Sbjct: 89520 ctgctgctgctgcaggcttg 89539
>emb|AL669966.10| Mouse DNA sequence from clone RP23-174K9 on chromosome 4, complete sequence Length = 199890 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 agagaggatcaagaaggcaaagaa 428 |||||||||||||||| ||||||| Sbjct: 44264 agagaggatcaagaagacaaagaa 44241 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,031,019 Number of Sequences: 3902068 Number of extensions: 5031019 Number of successful extensions: 259613 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 258629 Number of HSP's gapped (non-prelim): 968 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
