>PRPX_HORVU (P16273) Pathogen-related protein|
          Length = 235

 Score =  170 bits (430), Expect = 3e-42
 Identities = 84/143 (58%), Positives = 99/143 (69%)
 Frame = +3

Query: 126 AEDSSGGDKYRSHLAGEGEKNTVWRHGAPPTYDAVNSLFEAGRTQEWPEGSLEETVQNAI 305
           A    GGDKYRS L G+GEK TVWRHGAPP YD VN LFE  RT+EW EGS+EE VQ  +
Sbjct: 2   ASAEGGGDKYRSFLHGDGEKKTVWRHGAPPNYDLVNKLFEEERTKEWAEGSVEEKVQRLL 61

Query: 306 KTWEMELSHKARIEDFKSVSPGRFTLSVNGGRALTGEETLAMGSYNALLASPILPGAGAY 485
           KTWEME+ HK R ED KSV+   ++ S NG + LT EE +AMG YNA LA+ + P    Y
Sbjct: 62  KTWEMEMVHKVRPEDQKSVNLKNYSASTNGLKPLTREEVMAMGGYNAFLATTLPPEHRIY 121

Query: 486 DAAAETFESSHDLFRSAFPRGFA 554
           D  AE+ ES+   F +AFPRGFA
Sbjct: 122 DPEAESVESATSTFLTAFPRGFA 144

>HIS6_RHORT (Q2RNA7) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 252

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
 Frame = +3

Query: 348 DFKSVSPGRFTLSVNGGRALTG-------EETLAMGSYNALLAS 458
           D KSV PGRF +  +GGR  TG       +  +A+G+   LL S
Sbjct: 130 DAKSVGPGRFEIFTHGGRKATGLDAVDWAKRMVALGAGEILLTS 173

>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)|
          Length = 564

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 274 PSGHSWVLPASKRLFTASYVGGAPCRHTVFFSPSPAR*DRYLSPPEESSACAAI 113
           P G + + P+   L  ++++G A  RH  F SP+  R    ++P   +S  AA+
Sbjct: 449 PPGSASLPPSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAAL 502

>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)|
          Length = 562

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 274 PSGHSWVLPASKRLFTASYVGGAPCRHTVFFSPSPAR*DRYLSPPEESSACAAI 113
           P G + + P+   L  ++++G A  RH  F SP+  R    ++P   +S  AA+
Sbjct: 447 PPGSASLPPSGAPLGLSTFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAAL 500

>HFLC_VIBPA (P40606) Protein hflC (EC 3.4.-.-)|
          Length = 326

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/75 (32%), Positives = 34/75 (45%)
 Frame = +3

Query: 201 HGAPPTYDAVNSLFEAGRTQEWPEGSLEETVQNAIKTWEMELSHKARIEDFKSVSPGRFT 380
           H   P +D V  L    +T +   G  +  V +  K   ++   K RIEDF     GR+ 
Sbjct: 53  HFKMPLFDRVKQLDARIQTMD---GRADRFVTSEKKDVIIDSYVKWRIEDF-----GRYY 104

Query: 381 LSVNGGRALTGEETL 425
           L+  GG +LT E  L
Sbjct: 105 LATGGGNSLTAEALL 119

>HFLC_VIBCH (Q9KV08) Protein hflC (EC 3.4.-.-)|
          Length = 326

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = +3

Query: 201 HGAPPTYDAVNSLFEAGRTQEWPEGSLEETVQNAIKTWEMELSHKARIEDFKSVSPGRFT 380
           H   P +D V +L    +T +   G  +  V +  K   ++   K RIEDF     G++ 
Sbjct: 53  HFKMPLFDRVKTLDARIQTMD---GRSDRFVTSEKKDVIIDTYVKWRIEDF-----GQYY 104

Query: 381 LSVNGGRALTGEETL 425
           L+  GG ALT E  L
Sbjct: 105 LATGGGNALTAEALL 119

>OLEE1_BETVE (O49813) Olee1-like protein precursor|
          Length = 166

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 150 CRRRRNPLLVPPSDQRSDTHAGSPRRAADGDHGGECC 40
           CR R    L+  SD  +D  +G+ R   DGDH  E C
Sbjct: 59  CRNREGGTLIYSSDSETDK-SGTYRIPVDGDHEEEIC 94

>PLXA1_HUMAN (Q9UIW2) Plexin-A1 precursor (Semaphorin receptor NOV)|
          Length = 1896

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
 Frame = -2

Query: 358  DLKSSMRALCDSSISHVLIAFCTVSSSDP--SGHSWVLPASKRLFTAS----YVGGAPCR 197
            D     RAL     + V   F  VS S    SG +W+      L   S     VGG PC 
Sbjct: 943  DCSPHYRALSPKRFTFVTPTFYRVSPSRGPLSGGTWIGIEGSHLNAGSDVAVSVGGRPCS 1002

Query: 196  HTVFFSPSPAR*DRYLSPPEESSACAAIRSEIRHAR 89
                FS   +R  R L+PP +S   A I   I  A+
Sbjct: 1003 ----FSWRNSREIRCLTPPGQSPGSAPIIININRAQ 1034

>HIS6_RHOS4 (P50937) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 253

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 348 DFKSVSPGRFTLSVNGGRALTGEETLA 428
           D K+V+PGR+ +  +GGR  TG + +A
Sbjct: 130 DAKTVAPGRWEIFTHGGRRATGIDAVA 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,678,831
Number of Sequences: 219361
Number of extensions: 1218634
Number of successful extensions: 4326
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4326
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)