ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16b10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009301.1| Triticum aestivum clone wlm1.pk0012.h1:fis, full insert mRNA sequence Length = 1872 Score = 636 bits (321), Expect = e-179 Identities = 351/361 (97%) Strand = Plus / Plus Query: 162 gcaattttaagtacgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcg 221 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 171 gcaatttcaagtacgccttcacctgcgccctctgtgcttccatggccaccatcgtcctcg 230 Query: 222 gctacgacgtcggggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatca 281 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 231 gctacgacgttggggtgatgagcggtgcgtcgctgtacatcaagagggacctgcagatca 290 Query: 282 cggacgtgcagctggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtcct 341 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 291 cggacgtgcagctggagatcatgatgggcatcctgagcgtgtacgcgctcatcgggtcct 350 Query: 342 tcctcggcgcgaggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccg 401 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 351 tcctcggcgcgaggacgtccgactgggtcggccgccgcgtcaccgtcgtcttcgcggccg 410 Query: 402 ccatcttcttcaccggctccttgctcatgggcttcgcggtcaactacgccatgctcatgg 461 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 ccatcttcaccaccggctccttgctcatgggcttcgcggtcaactacgccatgctcatgg 470 Query: 462 tcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtaca 521 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 471 tcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtcgcgccagtgtaca 530 Query: 522 c 522 | Sbjct: 531 c 531 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 78 aaagagaaggagcagaggacaaggaagaaggatcgaggatggcttcagctgcgct 132 ||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 81 aaagaaaaggagcggaggacaaggaagaaggatcgaggatggcttctgctgcgct 135
>gb|BT009264.1| Triticum aestivum clone wlk8.pk0001.a11:fis, full insert mRNA sequence Length = 2109 Score = 232 bits (117), Expect = 9e-58 Identities = 293/349 (83%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcgg 234 ||||||| |||||||| || ||| |||||| || ||||| |||||||||||||| |||| Sbjct: 158 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgacatcgg 217 Query: 235 ggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagct 294 ||||||||||| ||||||||||||||| ||| ||| ||| |||||| ||| ||||| Sbjct: 218 cgtgatgagcggagcgtcgctgtacatccagaaggatctgaagatcaacgacacccagct 277 Query: 295 ggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcga- 353 |||| || | ||||||||||| | ||||||| ||||||| || |||||| ||||| | Sbjct: 278 ggaggtcctcatgggcatcctcaacgtgtactcgctcattggctccttcg-cggcggggc 336 Query: 354 ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttca 413 |||||||||||||| ||||||| ||| ||||| |||| ||||| |||| |||||||||| Sbjct: 337 ggacgtccgactggatcggccggcgcttcaccatcgtcttcgccgccgtcatcttcttcg 396 Query: 414 ccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcg 473 | ||| || | ||||||||||| | ||||||||||||||||||||| |||||||||||| Sbjct: 397 cgggcgccctcatcatgggcttctccgtcaactacgccatgctcatgttcggccgcttcg 456 Query: 474 tcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 | |||||||||||||||| ||||| ||||| | |||||||||||||| Sbjct: 457 tggccggcatcggcgtggggtacgctctcatgatcgcgcccgtgtacac 505
>ref|XM_478893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1536 Score = 198 bits (100), Expect = 1e-47 Identities = 283/344 (82%) Strand = Plus / Plus Query: 179 ttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcggggtg 238 |||||||||||| || ||| ||||||||| ||||| | |||||||| ||| |||||||| Sbjct: 67 ttcacctgcgccatcctcgcctccatggcctccatcattctcggctatgacatcggggtg 126 Query: 239 atgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagctggag 298 |||||||| || |||||||||||||||| |||||| ||||||| ||||||||| ||||| Sbjct: 127 atgagcggcgcatcgctgtacatcaagaaagacctgaagatcactgacgtgcaggtggag 186 Query: 299 atcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcgaggacg 358 ||| ||||||||||||||| | | ||| ||||| | || |||||| || | ||||||| Sbjct: 187 atcctgatgggcatcctgaacatctactcgctcgtcggctccttcgccgcggggaggacg 246 Query: 359 tccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcaccggc 418 | |||||| ||||||| || |||||||||| ||||| |||||| |||||||| || | Sbjct: 247 gcggactggatcggccggcggttcaccgtcgtcttcgctgccgccttcttcttcgccaga 306 Query: 419 tccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgtcacc 478 | | |||||||| ||| | | ||||||||| |||||||||||||||||||| | Sbjct: 307 gctctactcatggggttctccggtgactacgccactctcatggtcggccgcttcgtggcg 366 Query: 479 ggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||| |||||||||| ||||| |||||| | |||||||||||||| Sbjct: 367 ggcgtcggcgtggggtacgcgatcatgatcgcgcccgtgtacac 410
>dbj|AK119464.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-F04, full insert sequence Length = 1620 Score = 198 bits (100), Expect = 1e-47 Identities = 283/344 (82%) Strand = Plus / Plus Query: 179 ttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcggggtg 238 |||||||||||| || ||| ||||||||| ||||| | |||||||| ||| |||||||| Sbjct: 55 ttcacctgcgccatcctcgcctccatggcctccatcattctcggctatgacatcggggtg 114 Query: 239 atgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagctggag 298 |||||||| || |||||||||||||||| |||||| ||||||| ||||||||| ||||| Sbjct: 115 atgagcggcgcatcgctgtacatcaagaaagacctgaagatcactgacgtgcaggtggag 174 Query: 299 atcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcgaggacg 358 ||| ||||||||||||||| | | ||| ||||| | || |||||| || | ||||||| Sbjct: 175 atcctgatgggcatcctgaacatctactcgctcgtcggctccttcgccgcggggaggacg 234 Query: 359 tccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcaccggc 418 | |||||| ||||||| || |||||||||| ||||| |||||| |||||||| || | Sbjct: 235 gcggactggatcggccggcggttcaccgtcgtcttcgctgccgccttcttcttcgccaga 294 Query: 419 tccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgtcacc 478 | | |||||||| ||| | | ||||||||| |||||||||||||||||||| | Sbjct: 295 gctctactcatggggttctccggtgactacgccactctcatggtcggccgcttcgtggcg 354 Query: 479 ggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||| |||||||||| ||||| |||||| | |||||||||||||| Sbjct: 355 ggcgtcggcgtggggtacgcgatcatgatcgcgcccgtgtacac 398
>ref|XM_478892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1961 Score = 184 bits (93), Expect = 2e-43 Identities = 287/349 (82%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcgg 234 ||||||| |||||||| || ||| |||||| || ||||| ||||||||||||| |||| Sbjct: 136 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 195 Query: 235 ggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagct 294 |||||||||||||||||||||||||||||||| |||| | | |||| |||| | || | Sbjct: 196 ggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacgggaaggt 255 Query: 295 ggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcga- 353 |||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| | Sbjct: 256 ggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcggggc 314 Query: 354 ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttca 413 ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| |||||| Sbjct: 315 ggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattcttcg 374 Query: 414 ccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcg 473 | || | || |||||||| ||||| ||||||||||||||||||||| |||||||||||| Sbjct: 375 cgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgcttcg 434 Query: 474 tcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 | |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 435 tggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 483
>ref|XM_506429.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1301_C12.3 mRNA Length = 1962 Score = 184 bits (93), Expect = 2e-43 Identities = 287/349 (82%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcgg 234 ||||||| |||||||| || ||| |||||| || ||||| ||||||||||||| |||| Sbjct: 137 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 196 Query: 235 ggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagct 294 |||||||||||||||||||||||||||||||| |||| | | |||| |||| | || | Sbjct: 197 ggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacgggaaggt 256 Query: 295 ggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcga- 353 |||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| | Sbjct: 257 ggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcggggc 315 Query: 354 ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttca 413 ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| |||||| Sbjct: 316 ggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattcttcg 375 Query: 414 ccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcg 473 | || | || |||||||| ||||| ||||||||||||||||||||| |||||||||||| Sbjct: 376 cgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgcttcg 435 Query: 474 tcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 | |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 436 tggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 484
>gb|AF416867.1|AF416867 Oryza sativa putative sugar transporter mRNA, complete cds Length = 1860 Score = 184 bits (93), Expect = 2e-43 Identities = 287/349 (82%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcgg 234 ||||||| |||||||| || ||| |||||| || ||||| ||||||||||||| |||| Sbjct: 263 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 322 Query: 235 ggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagct 294 |||||||||||||||||||||||||||||||| |||| | | |||| |||| | || | Sbjct: 323 ggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacgggaaggt 382 Query: 295 ggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcga- 353 |||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| | Sbjct: 383 ggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcggggc 441 Query: 354 ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttca 413 ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| |||||| Sbjct: 442 ggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattcttcg 501 Query: 414 ccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcg 473 | || | || |||||||| ||||| ||||||||||||||||||||| |||||||||||| Sbjct: 502 cgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgcttcg 561 Query: 474 tcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 | |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 562 tggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 610
>dbj|AK102676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033102G08, full insert sequence Length = 1961 Score = 184 bits (93), Expect = 2e-43 Identities = 287/349 (82%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcgg 234 ||||||| |||||||| || ||| |||||| || ||||| ||||||||||||| |||| Sbjct: 136 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 195 Query: 235 ggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagct 294 |||||||||||||||||||||||||||||||| |||| | | |||| |||| | || | Sbjct: 196 ggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacgggaaggt 255 Query: 295 ggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcga- 353 |||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| | Sbjct: 256 ggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcggggc 314 Query: 354 ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttca 413 ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| |||||| Sbjct: 315 ggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattcttcg 374 Query: 414 ccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcg 473 | || | || |||||||| ||||| ||||||||||||||||||||| |||||||||||| Sbjct: 375 cgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgcttcg 434 Query: 474 tcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 | |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 435 tggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 483
>dbj|AK059423.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E03, full insert sequence Length = 1962 Score = 184 bits (93), Expect = 2e-43 Identities = 287/349 (82%), Gaps = 2/349 (0%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacgacgtcgg 234 ||||||| |||||||| || ||| |||||| || ||||| ||||||||||||| |||| Sbjct: 137 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacgatatcgg 196 Query: 235 ggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagct 294 |||||||||||||||||||||||||||||||| |||| | | |||| |||| | || | Sbjct: 197 ggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacgggaaggt 256 Query: 295 ggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcga- 353 |||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| | Sbjct: 257 ggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcggggc 315 Query: 354 ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttca 413 ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| |||||| Sbjct: 316 ggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattcttcg 375 Query: 414 ccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcg 473 | || | || |||||||| ||||| ||||||||||||||||||||| |||||||||||| Sbjct: 376 cgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgcttcg 435 Query: 474 tcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 | |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 436 tggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 484
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 167 bits (84), Expect = 5e-38 Identities = 240/292 (82%) Strand = Plus / Minus Query: 231 tcggggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgc 290 |||||||||||||||| || |||||||||||||||| |||||| ||||||| ||||||| Sbjct: 23532635 tcggggtgatgagcggcgcatcgctgtacatcaagaaagacctgaagatcactgacgtgc 23532576 Query: 291 agctggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcg 350 || |||||||| ||||||||||||||| | | ||| ||||| | || |||||| || | Sbjct: 23532575 aggtggagatcctgatgggcatcctgaacatctactcgctcgtcggctccttcgccgcgg 23532516 Query: 351 cgaggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttct 410 ||||||| | |||||| ||||||| || |||||||||| ||||| |||||| |||||| Sbjct: 23532515 ggaggacggcggactggatcggccggcggttcaccgtcgtcttcgctgccgccttcttct 23532456 Query: 411 tcaccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgct 470 || || | | | |||||||| ||| | | ||||||||| |||||||||||||||| Sbjct: 23532455 tcgccagagctctactcatggggttctccggtgactacgccactctcatggtcggccgct 23532396 Query: 471 tcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 |||| | ||| |||||||||| ||||| |||||| | |||||||||||||| Sbjct: 23532395 tcgtggcgggcgtcggcgtggggtacgcgatcatgatcgcgcccgtgtacac 23532344 Score = 153 bits (77), Expect = 7e-34 Identities = 241/293 (82%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 231 tcggggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgc 290 |||||||||||||||||||||||||||||||||||| |||| | | |||| |||| | Sbjct: 23528982 tcggggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacggga 23529041 Query: 291 agctggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcg 350 || ||||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| Sbjct: 23529042 aggtggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcg 23529100 Query: 351 cga-ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttc 409 | ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| ||| Sbjct: 23529101 gggcggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattc 23529160 Query: 410 ttcaccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgc 469 ||| | || | || |||||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 23529161 ttcgcgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgc 23529220 Query: 470 ttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||| |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 23529221 ttcgtggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 23529273 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacg 227 ||||||| |||||||| || ||| |||||| || ||||| |||||||||||| Sbjct: 23528827 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacg 23528879
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 167 bits (84), Expect = 5e-38 Identities = 240/292 (82%) Strand = Plus / Minus Query: 231 tcggggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgc 290 |||||||||||||||| || |||||||||||||||| |||||| ||||||| ||||||| Sbjct: 93028 tcggggtgatgagcggcgcatcgctgtacatcaagaaagacctgaagatcactgacgtgc 92969 Query: 291 agctggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcg 350 || |||||||| ||||||||||||||| | | ||| ||||| | || |||||| || | Sbjct: 92968 aggtggagatcctgatgggcatcctgaacatctactcgctcgtcggctccttcgccgcgg 92909 Query: 351 cgaggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttct 410 ||||||| | |||||| ||||||| || |||||||||| ||||| |||||| |||||| Sbjct: 92908 ggaggacggcggactggatcggccggcggttcaccgtcgtcttcgctgccgccttcttct 92849 Query: 411 tcaccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgct 470 || || | | | |||||||| ||| | | ||||||||| |||||||||||||||| Sbjct: 92848 tcgccagagctctactcatggggttctccggtgactacgccactctcatggtcggccgct 92789 Query: 471 tcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 |||| | ||| |||||||||| ||||| |||||| | |||||||||||||| Sbjct: 92788 tcgtggcgggcgtcggcgtggggtacgcgatcatgatcgcgcccgtgtacac 92737 Score = 153 bits (77), Expect = 7e-34 Identities = 241/293 (82%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 231 tcggggtgatgagcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgc 290 |||||||||||||||||||||||||||||||||||| |||| | | |||| |||| | Sbjct: 89375 tcggggtgatgagcggggcgtcgctgtacatcaagaaggacttcaacatcagtgacggga 89434 Query: 291 agctggagatcatgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcg 350 || ||||| | | |||||||| |||| | | ||| ||||||| || |||||| ||||| Sbjct: 89435 aggtggaggttctcatgggcatactgaacctctactcgctcatcggctccttcg-cggcg 89493 Query: 351 cga-ggacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttc 409 | ||||||| |||||| ||||||| || |||| |||||||||| |||| ||| ||| Sbjct: 89494 gggcggacgtcggactggatcggccggcggtacaccatcgtgttcgccgccgtcatattc 89553 Query: 410 ttcaccggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgc 469 ||| | || | || |||||||| ||||| ||||||||||||||||||||| |||||||| Sbjct: 89554 ttcgcgggggcgttcctcatggggttcgccgtcaactacgccatgctcatgttcggccgc 89613 Query: 470 ttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||| |||||||||||||||||||||| ||||| | ||||| |||||||| Sbjct: 89614 ttcgtggccggcatcggcgtgggctacgcgctcatgatcgcgccggtgtacac 89666 Score = 42.1 bits (21), Expect = 1.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 175 cgccttcacctgcgccctctgcgcttccatggccaccatcgtcctcggctacg 227 ||||||| |||||||| || ||| |||||| || ||||| |||||||||||| Sbjct: 89220 cgccttcgcctgcgccatcctcgcctccatgacctccatcctcctcggctacg 89272
>ref|NM_189409.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1536 Score = 127 bits (64), Expect = 4e-26 Identities = 226/280 (80%) Strand = Plus / Plus Query: 243 gcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagctggagatca 302 ||||||||||||||| ||||||| |||| || ||||||||||||| || |||||||| Sbjct: 68 gcggggcgtcgctgttcatcaaggaggacatgaagatcacggacgtcgaggtggagatcc 127 Query: 303 tgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcgaggacgtccg 362 || | |||||||| | | | ||| | ||| | || |||||| || || |||| |||| Sbjct: 128 tgctcggcatcctcaacctctactccctcgtcggctccttcgccgccggccggacctccg 187 Query: 363 actgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcaccggctcct 422 ||||| ||||||||||| ||||| || | |||| || | |||||||||| |||| || Sbjct: 188 actggatcggccgccgcctcaccatcatcctcgccgcggtcatcttcttcgtcggcgcca 247 Query: 423 tgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgtcaccggca 482 | | |||||| || | ||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 248 tcatgatgggcctctccgtcaactaccccatgctcatggccggccgcttcgtcgccggca 307 Query: 483 tcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||| ||||||||| ||||| | |||||||| ||||| Sbjct: 308 tcggcgtcggctacgccttcatgatcgcgcccgtctacac 347
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 4e-26 Identities = 226/280 (80%) Strand = Plus / Minus Query: 243 gcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagctggagatca 302 ||||||||||||||| ||||||| |||| || ||||||||||||| || |||||||| Sbjct: 42630292 gcggggcgtcgctgttcatcaaggaggacatgaagatcacggacgtcgaggtggagatcc 42630233 Query: 303 tgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcgaggacgtccg 362 || | |||||||| | | | ||| | ||| | || |||||| || || |||| |||| Sbjct: 42630232 tgctcggcatcctcaacctctactccctcgtcggctccttcgccgccggccggacctccg 42630173 Query: 363 actgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcaccggctcct 422 ||||| ||||||||||| ||||| || | |||| || | |||||||||| |||| || Sbjct: 42630172 actggatcggccgccgcctcaccatcatcctcgccgcggtcatcttcttcgtcggcgcca 42630113 Query: 423 tgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgtcaccggca 482 | | |||||| || | ||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 42630112 tcatgatgggcctctccgtcaactaccccatgctcatggccggccgcttcgtcgccggca 42630053 Query: 483 tcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||| ||||||||| ||||| | |||||||| ||||| Sbjct: 42630052 tcggcgtcggctacgccttcatgatcgcgcccgtctacac 42630013 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cgtgggctacgccatcatggtggcg 511 ||||||| ||||||||||||||||| Sbjct: 5899216 cgtgggcgacgccatcatggtggcg 5899240 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cgccttcacctgcgccctct 194 |||||||||||||||||||| Sbjct: 23624036 cgccttcacctgcgccctct 23624017
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 127 bits (64), Expect = 4e-26 Identities = 226/280 (80%) Strand = Plus / Minus Query: 243 gcggggcgtcgctgtacatcaagagggacctgcagatcacggacgtgcagctggagatca 302 ||||||||||||||| ||||||| |||| || ||||||||||||| || |||||||| Sbjct: 151175 gcggggcgtcgctgttcatcaaggaggacatgaagatcacggacgtcgaggtggagatcc 151116 Query: 303 tgatgggcatcctgagcgtgtacgcgctcatagggtccttcctcggcgcgaggacgtccg 362 || | |||||||| | | | ||| | ||| | || |||||| || || |||| |||| Sbjct: 151115 tgctcggcatcctcaacctctactccctcgtcggctccttcgccgccggccggacctccg 151056 Query: 363 actgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcaccggctcct 422 ||||| ||||||||||| ||||| || | |||| || | |||||||||| |||| || Sbjct: 151055 actggatcggccgccgcctcaccatcatcctcgccgcggtcatcttcttcgtcggcgcca 150996 Query: 423 tgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgtcaccggca 482 | | |||||| || | ||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 150995 tcatgatgggcctctccgtcaactaccccatgctcatggccggccgcttcgtcgccggca 150936 Query: 483 tcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||| ||||||||| ||||| | |||||||| ||||| Sbjct: 150935 tcggcgtcggctacgccttcatgatcgcgcccgtctacac 150896
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 5067091 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 5067150 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 5067151 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 5067210 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 5067211 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 5067258 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 456 tcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccg 515 ||||| ||||||||||||| ||||| | || ||||||||||| ||||| | ||||| | Sbjct: 5080923 tcatgctcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccgg 5080982 Query: 516 tgtacac 522 ||||||| Sbjct: 5080983 tgtacac 5080989 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 448 cgccatgctcatggtcggccgcttcgtcaccggcatcggcgt 489 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 21901594 cgccatgctcatcgtcggccgcatcctcctcggcatcggcgt 21901553
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0064E16, from chromosome 3, complete sequence Length = 139123 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 131545 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 131604 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 131605 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 131664 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 131665 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 131712
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Minus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 102616 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 102557 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 102556 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 102497 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 102496 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 102449 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 456 tcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccg 515 ||||| ||||||||||||| ||||| | || ||||||||||| ||||| | ||||| | Sbjct: 88784 tcatgctcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccgg 88725 Query: 516 tgtacac 522 ||||||| Sbjct: 88724 tgtacac 88718
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 5066306 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 5066365 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 5066366 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 5066425 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 5066426 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 5066473 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 456 tcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccg 515 ||||| ||||||||||||| ||||| | || ||||||||||| ||||| | ||||| | Sbjct: 5080138 tcatgctcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccgg 5080197 Query: 516 tgtacac 522 ||||||| Sbjct: 5080198 tgtacac 5080204 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Minus Query: 448 cgccatgctcatggtcggccgcttcgtcaccggcatcggcgt 489 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 21894623 cgccatgctcatcgtcggccgcatcctcctcggcatcggcgt 21894582
>dbj|AK103915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A02, full insert sequence Length = 2167 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 468 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 527 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 528 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 587 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 588 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 635
>dbj|AK099273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058J16, full insert sequence Length = 2252 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 469 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 528 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 529 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 588 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 589 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 636
>dbj|AK070417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048F11, full insert sequence Length = 2300 Score = 87.7 bits (44), Expect = 3e-14 Identities = 137/168 (81%) Strand = Plus / Plus Query: 355 gacgtccgactgggtcggccgccgcgtcaccgtcgtgttcgcggccgccatcttcttcac 414 ||||||||||||| | ||||| || |||| | ||| |||| ||||||||||||||||| Sbjct: 469 gacgtccgactggctgggccggcggtacaccatggtgctcgccgccgccatcttcttcac 528 Query: 415 cggctccttgctcatgggcttcgcggtcaactacgccatgctcatggtcggccgcttcgt 474 ||| | | ||||||||| |||| |||||||| | ||||||| |||||||||||| Sbjct: 529 gggcgcgctcctcatgggcctcgccccgaactacgcgttcctcatggccggccgcttcgt 588 Query: 475 caccggcatcggcgtgggctacgccatcatggtggcgcccgtgtacac 522 ||||||||||||| |||||||| ||||| | |||||||||||||| Sbjct: 589 ggccggcatcggcgtcggctacgcgctcatgatcgcgcccgtgtacac 636
>gb|AF482011.1| Prunus cerasus sorbitol transporter mRNA, complete cds Length = 1927 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 443 aactacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatc 502 ||||||||| | ||||||||||| || ||||| |||| |||||||| ||||||||| || Sbjct: 401 aactacgccttcctcatggtcggtcggttcgtagccggaatcggcgtcggctacgccctc 460 Query: 503 atg 505 ||| Sbjct: 461 atg 463
>dbj|AB125647.1| Malus x domestica MdSOT4 mRNA for sorbitol transporter, complete cds Length = 2173 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 442 caactacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgcc 499 ||||||| || | |||||| ||||||||||||| ||||| ||||||| ||||||||| Sbjct: 483 caactacaccttcctcatgtgcggccgcttcgtcgccggcctcggcgtcggctacgcc 540 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 tccgactgggtcggccgccgc 379 ||||||||||||||||||||| Sbjct: 400 tccgactgggtcggccgccgc 420
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 467 cgcttcgtcaccggcatcggcgtgggc 493 ||||||||||||||||||||| ||||| Sbjct: 291062 cgcttcgtcaccggcatcggcctgggc 291088
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 456 tcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcatggtggcgcccg 515 ||||| ||||||||||||| ||||| | || ||||||||||| ||||| | ||||| | Sbjct: 175597 tcatgctcggccgcttcgtggccggcgtgggtgtgggctacgcgctcatgatcgcgccgg 175538 Query: 516 tgtacac 522 ||||||| Sbjct: 175537 tgtacac 175531
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 474 tcaccggcatcggcgtgggctacgcca 500 |||||| |||||||||||||||||||| Sbjct: 3520143 tcaccgccatcggcgtgggctacgcca 3520169
>ref|NM_184958.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1810 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 448 cgccatgctcatggtcggccgcttcgtcaccggcatcggcgt 489 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 520 cgccatgctcatcgtcggccgcatcctcctcggcatcggcgt 561
>ref|XM_472711.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1554 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 436 cgcggtcaactacgccatgctcatggtcggccgc 469 |||||||||| |||||||||||| ||||||||| Sbjct: 390 cgcggtcaacatcgccatgctcatcgtcggccgc 423
>gb|AC110227.6| Mus musculus chromosome 9, clone RP24-331H14, complete sequence Length = 196758 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 gagcagaggacaaggaagaagg 108 |||||||||||||||||||||| Sbjct: 196290 gagcagaggacaaggaagaagg 196269
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 382 caccgtcgtgttcgcggccgcc 403 |||||||||||||||||||||| Sbjct: 167460 caccgtcgtgttcgcggccgcc 167439
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 436 cgcggtcaactacgccatgctcatggtcggccgc 469 |||||||||| |||||||||||| ||||||||| Sbjct: 56612 cgcggtcaacatcgccatgctcatcgtcggccgc 56645
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 436 cgcggtcaactacgccatgctcatggtcggccgc 469 |||||||||| |||||||||||| ||||||||| Sbjct: 161515 cgcggtcaacatcgccatgctcatcgtcggccgc 161548
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 436 cgcggtcaactacgccatgctcatggtcggccgc 469 |||||||||| |||||||||||| ||||||||| Sbjct: 22719415 cgcggtcaacatcgccatgctcatcgtcggccgc 22719448
>gb|AC158237.2| Mus musculus BAC clone RP23-142I8 from chromosome 9, complete sequence Length = 179606 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 gagcagaggacaaggaagaagg 108 |||||||||||||||||||||| Sbjct: 18400 gagcagaggacaaggaagaagg 18379
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 448 cgccatgctcatggtcggccgcttcgtcaccggcatcggcgt 489 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 107422 cgccatgctcatcgtcggccgcatcctcctcggcatcggcgt 107463
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 466 ccgcttcgtcaccggcatcggc 487 |||||||||||||||||||||| Sbjct: 567771 ccgcttcgtcaccggcatcggc 567750
>dbj|AK072059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111I22, full insert sequence Length = 1847 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 436 cgcggtcaactacgccatgctcatggtcggccgc 469 |||||||||| |||||||||||| ||||||||| Sbjct: 483 cgcggtcaacatcgccatgctcatcgtcggccgc 516
>dbj|AK071180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082A15, full insert sequence Length = 1827 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 448 cgccatgctcatggtcggccgcttcgtcaccggcatcggcgt 489 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 530 cgccatgctcatcgtcggccgcatcctcctcggcatcggcgt 571
>dbj|AB052884.1| Oryza sativa OsMST2 mRNA for monosaccharide transporter 2, complete cds Length = 1569 Score = 44.1 bits (22), Expect = 0.45 Identities = 37/42 (88%) Strand = Plus / Plus Query: 448 cgccatgctcatggtcggccgcttcgtcaccggcatcggcgt 489 |||||||||||| ||||||||| || || |||||||||||| Sbjct: 405 cgccatgctcatcgtcggccgcatcctcctcggcatcggcgt 446
>ref|NM_188368.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1218 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cgtgggctacgccatcatggtggcg 511 ||||||| ||||||||||||||||| Sbjct: 396 cgtgggcgacgccatcatggtggcg 420
>gb|AY592976.1| Malus x domestica sorbitol transporter (SOT1) mRNA, complete cds Length = 2010 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 tccgactgggtcggccgccgc 379 ||||||||||||||||||||| Sbjct: 260 tccgactgggtcggccgccgc 280
>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete sequence Length = 178544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 gctggagatcatgatgggcat 312 ||||||||||||||||||||| Sbjct: 130563 gctggagatcatgatgggcat 130543
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 445 ctacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcat 504 ||||||| |||||||| || |||||||||||| || ||||||| |||| | || || | Sbjct: 112675 ctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgt 112616 Query: 505 ggtggcgcccgtgtaca 521 || ||||||||||||| Sbjct: 112615 cgtcgcgcccgtgtaca 112599
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Plus Query: 445 ctacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcat 504 ||||||| |||||||| || |||||||||||| || ||||||| |||| | || || | Sbjct: 97423 ctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgt 97482 Query: 505 ggtggcgcccgtgtaca 521 || ||||||||||||| Sbjct: 97483 cgtcgcgcccgtgtaca 97499
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 tcggccgcttcgtcaccggca 482 ||||||||||||||||||||| Sbjct: 4882905 tcggccgcttcgtcaccggca 4882885
>gb|AY237400.1| Malus x domestica sorbitol transporter (SOT1) mRNA, complete cds Length = 2012 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 tccgactgggtcggccgccgc 379 ||||||||||||||||||||| Sbjct: 260 tccgactgggtcggccgccgc 280
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 445 ctacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcat 504 ||||||| |||||||| || |||||||||||| || ||||||| |||| | || || | Sbjct: 24311566 ctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgt 24311507 Query: 505 ggtggcgcccgtgtaca 521 || ||||||||||||| Sbjct: 24311506 cgtcgcgcccgtgtaca 24311490
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cgtgggctacgccatcatggtggcg 511 ||||||| ||||||||||||||||| Sbjct: 102957 cgtgggcgacgccatcatggtggcg 102981
>dbj|AK106745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B11, full insert sequence Length = 1614 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Plus Query: 445 ctacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcat 504 ||||||| |||||||| || |||||||||||| || ||||||| |||| | || || | Sbjct: 398 ctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgt 457 Query: 505 ggtggcgcccgtgtaca 521 || ||||||||||||| Sbjct: 458 cgtcgcgcccgtgtaca 474
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 379 cgtcaccgtcgtgttcgcggccgcc 403 |||||||||||| |||||||||||| Sbjct: 1487610 cgtcaccgtcgttttcgcggccgcc 1487634
>dbj|AK066635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071A07, full insert sequence Length = 3495 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 cgtgggctacgccatcatggtggcg 511 ||||||| ||||||||||||||||| Sbjct: 555 cgtgggcgacgccatcatggtggcg 579
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 63/77 (81%) Strand = Plus / Minus Query: 445 ctacgccatgctcatggtcggccgcttcgtcaccggcatcggcgtgggctacgccatcat 504 ||||||| |||||||| || |||||||||||| || ||||||| |||| | || || | Sbjct: 24623235 ctacgccgcgctcatggccgcgcgcttcgtcaccagcgtcggcgtcggcttctccctcgt 24623176 Query: 505 ggtggcgcccgtgtaca 521 || ||||||||||||| Sbjct: 24623175 cgtcgcgcccgtgtaca 24623159
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 cgctgtacatcaagagggacc 272 ||||||||||||||||||||| Sbjct: 177020 cgctgtacatcaagagggacc 177000
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 466 ccgcttcgtcaccggcatcggcgtgggc 493 |||||||||||| ||||||||| ||||| Sbjct: 1096651 ccgcttcgtcacgggcatcggcatgggc 1096678
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 ggcatcggcgtgggctacgccatc 502 ||||||||| |||||||||||||| Sbjct: 142580 ggcatcggcatgggctacgccatc 142557
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 catcttcttcaccggctccttgct 426 |||||||||||||||||| ||||| Sbjct: 2204211 catcttcttcaccggctcgttgct 2204234
>ref|XM_859373.1| PREDICTED: Canis familiaris similar to squamous cell carcinoma antigen recognized by T cells 3, transcript variant 3 (LOC486319), mRNA Length = 3665 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cagttcactcatcactaggc 29 |||||||||||||||||||| Sbjct: 3554 cagttcactcatcactaggc 3535
>ref|XM_543445.2| PREDICTED: Canis familiaris similar to squamous cell carcinoma antigen recognized by T cells 3, transcript variant 1 (LOC486319), mRNA Length = 3734 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cagttcactcatcactaggc 29 |||||||||||||||||||| Sbjct: 3623 cagttcactcatcactaggc 3604
>ref|XM_859334.1| PREDICTED: Canis familiaris similar to squamous cell carcinoma antigen recognized by T cells 3, transcript variant 2 (LOC486319), mRNA Length = 3680 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cagttcactcatcactaggc 29 |||||||||||||||||||| Sbjct: 3569 cagttcactcatcactaggc 3550
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 ggcatcggcgtgggctacgccatc 502 ||||||||| |||||||||||||| Sbjct: 142589 ggcatcggcatgggctacgccatc 142566
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 ggcatcggcgtgggctacgccatc 502 ||||||||| |||||||||||||| Sbjct: 142629 ggcatcggcatgggctacgccatc 142606
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 catcttcttcaccggctccttgct 426 ||||||||||||||||||| |||| Sbjct: 3813250 catcttcttcaccggctccctgct 3813273
>gb|AY742789.1| Nitrosovibrio sp. RY6A 3-phosphoglycerate kinase (cbbK) gene, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcgcttccatggccaccatc 214 |||||||||||||||||||| Sbjct: 241 gcgcttccatggccaccatc 260
>gb|AY742788.1| Nitrosovibrio sp. RY3C 3-phosphoglycerate kinase (cbbK) gene, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcgcttccatggccaccatc 214 |||||||||||||||||||| Sbjct: 241 gcgcttccatggccaccatc 260
>gb|AY742787.1| Nitrosovibrio sp. FJI82 3-phosphoglycerate kinase (cbbK) gene, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 gcgcttccatggccaccatc 214 |||||||||||||||||||| Sbjct: 241 gcgcttccatggccaccatc 260
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 agaaggagcagaggacaaggaagaagga 109 |||||||| |||||| |||||||||||| Sbjct: 16675 agaaggagaagaggaaaaggaagaagga 16702
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 gacaaggaagaaggatcgag 114 |||||||||||||||||||| Sbjct: 814187 gacaaggaagaaggatcgag 814168
>gb|AC140227.7| Mus musculus BAC clone RP24-487N2 from chromosome 8, complete sequence Length = 188262 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gcagaggacaaggaagaagg 108 |||||||||||||||||||| Sbjct: 110391 gcagaggacaaggaagaagg 110372
>gb|AY443246.1| Yuhina zantholeuca recombination activating protein 2 (RAG2) gene, partial cds Length = 1152 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 aggagcagaggacaaggaagaaggatcg 112 ||||| ||||||||||||||||| |||| Sbjct: 942 aggagaagaggacaaggaagaagaatcg 969
>gb|AY443245.1| Vireo philadelphia recombination activating protein 2 (RAG2) gene, partial cds Length = 1143 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 85 aggagcagaggacaaggaagaaggatcg 112 ||||| ||||||||||||||||| |||| Sbjct: 933 aggagaagaggacaaggaagaagaatcg 960
>gb|AC011503.4|AC011503 Homo sapiens chromosome 19 clone CTB-92J24, complete sequence Length = 104082 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 aaaaagagaaggagcagaggacaaggaa 103 |||||||||||||| |||||| |||||| Sbjct: 26264 aaaaagagaaggaggagaggagaaggaa 26291
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1085F01 Length = 163671 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cgccttcacctgcgccctct 194 |||||||||||||||||||| Sbjct: 1740 cgccttcacctgcgccctct 1721
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 457 catggtcggccgcttcgtcaccggcatcggcg 488 |||||||||| ||||| || |||||||||||| Sbjct: 6766744 catggtcggcggcttcctcgccggcatcggcg 6766775
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 tcaccggcatcggcgtgggc 493 |||||||||||||||||||| Sbjct: 2896085 tcaccggcatcggcgtgggc 2896104 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 tcggccgcttcgtcaccggcatcg 485 ||||||||||| |||||||||||| Sbjct: 575923 tcggccgcttcctcaccggcatcg 575946
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cgccttcacctgcgccctct 194 |||||||||||||||||||| Sbjct: 86735 cgccttcacctgcgccctct 86716
>dbj|AK058620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B07, full insert sequence Length = 1587 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gcttcgtcaccggcatcggc 487 |||||||||||||||||||| Sbjct: 917 gcttcgtcaccggcatcggc 936
>gb|AF039694.1|AF039694 Homo sapiens antigen NY-CO-16 mRNA, complete cds Length = 1298 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 82 agaaggagcagaggacaaggaagaagga 109 |||||||| |||||| |||||||||||| Sbjct: 935 agaaggagaagaggaaaaggaagaagga 962
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 catcttcttcaccggctccttgct 426 |||||||||||| ||||||||||| Sbjct: 4687883 catcttcttcacaggctccttgct 4687906
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 428 atgggcttcgcggtcaactacgcc 451 ||||||| |||||||||||||||| Sbjct: 262311 atgggctacgcggtcaactacgcc 262334
>gb|AF002817.1|AF002817 Thiocapsa roseopersicina stable NiFe hydrogenase small subunit precursor (hydS), intergenic sequence protein 1 (isp1), intergenic sequence protein 2 (isp2), and stable NiFe hydrogenase large subunit (hydL) genes, complete cds Length = 7873 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 caactacgccatgctcatgg 461 |||||||||||||||||||| Sbjct: 1602 caactacgccatgctcatgg 1621
>gb|AF058302.1|AF058302 Streptomyces roseofulvus frenolicin biosynthetic gene cluster, complete sequence Length = 25306 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgtcaccggcatcggcgtgg 491 |||||||||||||||||||| Sbjct: 14353 cgtcaccggcatcggcgtgg 14372
>gb|L26338.1|STMFPS Streptomyces roseofulvus frenolicin polyketide synthase genes, complete cds Length = 5530 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgtcaccggcatcggcgtgg 491 |||||||||||||||||||| Sbjct: 58 cgtcaccggcatcggcgtgg 77 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,490,056 Number of Sequences: 3902068 Number of extensions: 3490056 Number of successful extensions: 78309 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76736 Number of HSP's gapped (non-prelim): 1562 length of query: 522 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 499 effective length of database: 17,143,297,704 effective search space: 8554505554296 effective search space used: 8554505554296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
