ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16a10 |
|---|---|
| Clone Library Name | barley_pub |
>KRA44_HUMAN (Q9BYR3) Keratin-associated protein 4-4 (Keratin-associated protein| 4.4) (Ultrahigh sulfur keratin-associated protein 4.4) Length = 166 Score = 34.7 bits (78), Expect = 0.18 Identities = 35/112 (31%), Positives = 43/112 (38%), Gaps = 5/112 (4%) Frame = +3 Query: 195 CQSPNSRRTPSCPSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRRQ---RMSCRH 365 CQ+ R T PSC + C C T CR P C C R Q + C+ Sbjct: 26 CQTTCCRTTCCRPSCCVSSCCRPQC--CQTTCCRTTCCHPSCCVSSCCRPQCCQSVCCQP 83 Query: 366 TLLCPSS-RSLNYRIWLC-PRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPS 515 T P ++ R C P C R Q C CQS+ C+ T CPS Sbjct: 84 TCCRPQCCQTTCCRTTCCRPSCCRPQ----C-------CQSVCCQPTCCCPS 124
>CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| Length = 1027 Score = 33.5 bits (75), Expect = 0.40 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 16/102 (15%) Frame = +3 Query: 195 CQSPNSRRTPSCPSCQSLNYLTLSCPKCHTL-*CRKRQRS---------PKCHTPWCRRR 344 C +P + CP C+ Y+T++ P C +L C ++S C T C+ R Sbjct: 436 CLNPVTVPGECCPVCEEPTYITMAPPACGSLDNCTLLEQSCAFGFRLDPSGCRTCACKSR 495 Query: 345 QRM------SCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKC 452 + + SC TL CP + I C C+ R R KC Sbjct: 496 EELCGGLMASC--TLKCPFGFQTD--IHGCDVCQCRPRHKKC 533
>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein| 4.5) (Ultrahigh sulfur keratin-associated protein 4.5) Length = 186 Score = 33.1 bits (74), Expect = 0.52 Identities = 32/102 (31%), Positives = 37/102 (36%), Gaps = 5/102 (4%) Frame = +3 Query: 225 SCPSCQSLNYLTLSCPKC-HTL*CRKRQRSPKCHTPWCRRR--QRMSCRHTLLCPSSRSL 395 S S QS CP C T CR P C P C + + +C H C SS Sbjct: 8 SVSSEQSCGLENCCCPSCCQTTCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCISSCCR 67 Query: 396 NY--RIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPS 515 Y C C R C T C++ CR T CPS Sbjct: 68 PYCCESSCCRPCCCRPSC--CQTTC---CRTTCCRTTCCCPS 104
>KR410_HUMAN (Q9BYQ7) Keratin-associated protein 4-10 (Keratin-associated| protein 4.10) (Ultrahigh sulfur keratin-associated protein 4.10) Length = 127 Score = 33.1 bits (74), Expect = 0.52 Identities = 30/108 (27%), Positives = 36/108 (33%), Gaps = 3/108 (2%) Frame = +3 Query: 195 CQSPNSRRTPSCPSCQSLNYLTLSCPK---CHTL*CRKRQRSPKCHTPWCRRRQRMSCRH 365 C+ + T CPSC + SC + C T CR P C C+ R SC Sbjct: 25 CRPSCCQTTCCCPSCVVSSCCRPSCSQTTCCQTTCCRPSCCRPVC----CQTTCRPSCGV 80 Query: 366 TLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLC 509 + C R L C T R C SC R L C Sbjct: 81 SSCC--------------------RPLCCQTTCRPSCGVSSCCRPLCC 108
>TPM4_DROME (P49455) Tropomyosin 1, isoforms 33/34 (Tropomyosin II)| Length = 518 Score = 32.7 bits (73), Expect = 0.68 Identities = 24/60 (40%), Positives = 26/60 (43%) Frame = -2 Query: 434 ASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPASQGVALRAREGE 255 A PA A P A A+ A A A A P +PA A AP A A A A EGE Sbjct: 455 APPADGAAPPAEAAAAPADAAAPAAEAAPAEAPAAEATAAEAPPAEAAPAEAAPAAAEGE 514
>PRM2_MOUSE (P07978) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| PP2-A; PP2-C; PP2-D; PP2-B (Protamine MP2)] Length = 107 Score = 32.7 bits (73), Expect = 0.68 Identities = 26/67 (38%), Positives = 31/67 (46%) Frame = +3 Query: 297 KRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRC 476 KR+RS CRRR+R SCRH R + R CRR +R RRRC Sbjct: 65 KRRRS-------CRRRRRHSCRH-------RRRHRR-----GCRRSRR--------RRRC 97 Query: 477 QSMSCRR 497 + CRR Sbjct: 98 RCRKCRR 104
>KR413_HUMAN (Q9BYU7) Keratin-associated protein 4-13 (Keratin-associated| protein 4.13) (Ultrahigh sulfur keratin-associated protein 4.13) Length = 106 Score = 32.3 bits (72), Expect = 0.89 Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 11/89 (12%) Frame = +3 Query: 276 CHTL*CRKRQRSPKCHTPWCRRR---QRMSCRHTLLCPSSRSLNYRIWLC--PRCRRRQR 440 C T CR P C P C R Q + C+ T CPS Y + C P+C + R Sbjct: 26 CQTTCCRTTCCRPSCCRPSCCRPQCCQSVCCQPTCCCPS-----YCVSSCCRPQCCQTTR 80 Query: 441 SLKCHTPWRR------RCQSMSCRRTLLC 509 C T R RC C ++L C Sbjct: 81 ---CRTTCCRPSCCVSRCYRPHCGQSLCC 106
>PF21A_HUMAN (Q96BD5) PHD finger protein 21A (BRAF35-HDAC complex protein BHC80)| (BHC80a) Length = 680 Score = 32.3 bits (72), Expect = 0.89 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = +3 Query: 291 CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPW 464 CRK + C T C R + C L P +++ +W+CPRC+ + + PW Sbjct: 494 CRKSGQLLMCDT--CSRVYHLDC----LDPPLKTIPKGMWICPRCQDQMLKKEEAIPW 545
>PF21A_MOUSE (Q6ZPK0) PHD finger protein 21A (BRAF35-HDAC complex protein BHC80)| (mBHC80) (BHC80a) Length = 659 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = +3 Query: 291 CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPW 464 CRK + C T C R + C L P +++ +W+CPRC+ + + PW Sbjct: 474 CRKSGQLLMCDT--CSRVYHLDC----LEPPLKTIPKGMWICPRCQDQMLKKEEAIPW 525
>HSPC_ELECI (P83183) Cysteine-rich protamine| Length = 84 Score = 32.0 bits (71), Expect = 1.2 Identities = 27/68 (39%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +3 Query: 327 PWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSL--KCHTPWRRRCQSMSCRRT 500 P CR R + CR SRS C RCRRR + KC RRR + RR Sbjct: 6 PRCRPRCKPRCR-------SRSKKR----CRRCRRRCSRIVKKC---CRRRSKCCRRRRR 51 Query: 501 LLCPSPRK 524 CP PRK Sbjct: 52 CPCPCPRK 59
>PRM2_RATFU (Q91VE1) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 105 Score = 31.6 bits (70), Expect = 1.5 Identities = 21/55 (38%), Positives = 24/55 (43%) Frame = +3 Query: 291 CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCH 455 CR+R+R CH RRR R CR RS R C +CRR CH Sbjct: 68 CRRRRRHSCCH----RRRHRRGCR--------RSRRRRRCKCRKCRRH-----CH 105 Score = 29.6 bits (65), Expect = 5.8 Identities = 25/67 (37%), Positives = 30/67 (44%) Frame = +3 Query: 297 KRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRC 476 KR+RS CRRR+R SC H R + R CRR +R RRRC Sbjct: 63 KRRRS-------CRRRRRHSCCH-------RRRHRR-----GCRRSRR--------RRRC 95 Query: 477 QSMSCRR 497 + CRR Sbjct: 96 KCRKCRR 102
>FBLN4_MOUSE (Q9WVJ9) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (Mutant p53-binding protein 1) Length = 443 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 16 CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLHEQCSTTP 141 CL++ +A K E G LCLPR +A + LH + P Sbjct: 58 CLTIPEACKGEMKCINHYGGYLCLPRSAAVISDLHGEGPPPP 99
>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent| kinase inhibitor p57) (p57KIP2) Length = 316 Score = 31.2 bits (69), Expect = 2.0 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = -2 Query: 443 APLASPAPWAQPNAVVQASGAR-A*QGVAAAHPLASPAPRGVALR--APLALPASQGVAL 273 AP +PAP P+A Q S + A QG PLA G++ R A A ++ G A+ Sbjct: 205 APAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAASANGAAI 264 Query: 272 RAREGEVV 249 + G ++ Sbjct: 265 KKLSGPLI 272 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/55 (40%), Positives = 24/55 (43%) Frame = -2 Query: 455 VALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 291 V AP +PAP A P A A A A P +PAP VA AP PA Sbjct: 153 VLAPAPAPAPAPVAAPVAAPVAVAVLA--PAPAPAPAPAPAPAPVAAPAPAPAPA 205 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 440 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 291 P+ +PAP P V A+ A VA P +PAP AP+A PA Sbjct: 152 PVLAPAPAPAPAPV--AAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPA 199
>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein| dromsopa) Length = 83 Score = 31.2 bits (69), Expect = 2.0 Identities = 23/55 (41%), Positives = 23/55 (41%) Frame = -2 Query: 455 VALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPA 291 VAL P PA P A A A AAA P A PAP AP A PA Sbjct: 15 VALARPQEDPANLPAPEAAAAPPAAAAAPPAAAAAPPAPPAPPAA---APQAAPA 66
>FTSZ1_RHIME (P30327) Cell division protein ftsZ homolog 1| Length = 590 Score = 30.8 bits (68), Expect = 2.6 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 8/78 (10%) Frame = -2 Query: 455 VALQAPLASPAPWAQPNAVVQA--------SGARA*QGVAAAHPLASPAPRGVALRAPLA 300 +A +A +A+PAP QP+ +A +G + P A PAPR V ++AP+ Sbjct: 394 IAARAQVAAPAPQPQPHLQEEAFRPQSKLFAGVAPTEAAPVMRP-AQPAPRPVEMQAPVQ 452 Query: 299 LPASQGVALRAREGEVVQ 246 P Q ++ +VV+ Sbjct: 453 -PQMQAQPVQQEPTQVVR 469
>FBLN4_HUMAN (O95967) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (UPH1 protein) Length = 443 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 16 CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLHEQCSTTP 141 CL++ +A K E G LCLPR +A + LH + P Sbjct: 58 CLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPP 99
>FBLN4_CRIGR (O55058) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (H411 protein) Length = 443 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 16 CLSLIDAHKQEHHAAQQRHGLLCLPRGSAALMQLHEQCSTTP 141 CL++ +A K E G LCLPR +A + LH + P Sbjct: 58 CLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPP 99
>PRM2_RAT (P11248) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 104 Score = 30.4 bits (67), Expect = 3.4 Identities = 26/76 (34%), Positives = 33/76 (43%) Frame = +3 Query: 267 CPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSL 446 C + H + KR+RS CRRR+R SCRH R + R CRR +R Sbjct: 54 CKRLHRI--HKRRRS-------CRRRRRHSCRH-------RRRHRR-----GCRRSRR-- 90 Query: 447 KCHTPWRRRCQSMSCR 494 RR C+ CR Sbjct: 91 ------RRSCRCRKCR 100
>MTB1_BACSQ (Q9LAI2) Modification methylase BslI (EC 2.1.1.113) (N-4| cytosine-specific methyltransferase BslI) (M.BslI) Length = 912 Score = 30.4 bits (67), Expect = 3.4 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = +3 Query: 207 NSRRTPSCPSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSS 386 + RR P CPSC SLN S P+ + RS +C +P+C R + + S Sbjct: 464 DQRRIP-CPSCGSLNISGNSYPEIN-------NRSWECKSPYCPDRSKSNRGKRY----S 511 Query: 387 RSLNYRIW 410 + NY W Sbjct: 512 KKSNYMQW 519
>PRTC1_PORGI (P59916) Collagenase precursor (EC 3.4.-.-)| Length = 334 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 70 HGLLCLPRGSAALMQLHEQCSTTPRGGCAR 159 HG LC+ + LHE S+ RG CA+ Sbjct: 96 HGALCMAVSGKCYLSLHEHNSSANRGACAQ 125
>RS11_PYRAE (Q8ZTM9) 30S ribosomal protein S11P| Length = 133 Score = 30.0 bits (66), Expect = 4.4 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = -2 Query: 458 GVALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPASQGV 279 G ++A P+PWA A +A+ +G+ A H + P G ++ P AS + Sbjct: 41 GQVVRADKDKPSPWAAMQAAYKAAQLALARGINAVH-IKVRGPGGYGMKVP-GPGASAAI 98 Query: 278 ALRAREGEVV 249 AR G V+ Sbjct: 99 RALARSGLVI 108
>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated| protein 10.1) (High sulfur keratin-associated protein 10.1) (Keratin-associated protein 18-1) (Keratin-associated protein 18.1) Length = 282 Score = 30.0 bits (66), Expect = 4.4 Identities = 30/114 (26%), Positives = 38/114 (33%), Gaps = 6/114 (5%) Frame = +3 Query: 195 CQSP-NSRRTPSCPSCQSLNYLTLSCPKCHTL*CRKRQRSPKCHTPWCRRR-----QRMS 356 CQS S TPSC S + C C P C P C + Q+ S Sbjct: 67 CQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCMPVCCKPVCCLPTCSKDSSSCCQQSS 126 Query: 357 CRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRCQSMSCRRTLLCPSP 518 C+ T SS + + +C C+ C CQ SC SP Sbjct: 127 CQPTCCASSSSQQSCCVPVC--CKPVCYVPTCSESSSSCCQQSSCHPACCTSSP 178
>HSP1_TRAJO (Q8MJS8) Sperm protamine P1| Length = 50 Score = 29.6 bits (65), Expect = 5.8 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +3 Query: 291 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 431 CR + RS C CRRR+R SCR YR+ RCRR Sbjct: 6 CRSQSRSRCCRPRRRCRRRRRQSCRARRRATRCCRRRYRL----RCRR 49
>SSI2_STRLO (P35706) Trypsin inhibitor STI2 precursor| Length = 144 Score = 29.6 bits (65), Expect = 5.8 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 11/80 (13%) Frame = -2 Query: 458 GVALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPL------ASPAPRGVALRAPLAL 297 G AL P A+PA P+A+V G AAA PL +P G LA Sbjct: 24 GAALATPAAAPASLYAPSALVLTVGHGT--SAAAASPLRAVTLNCAPTASGTHPAPALAC 81 Query: 296 PASQGV-----ALRAREGEV 252 +GV AL+AR+G + Sbjct: 82 ADLRGVGGDIDALKARDGVI 101
>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3| Length = 950 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = +3 Query: 264 SCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPR---CRRR 434 +CP H RK + +C + +HTLLCP R +CPR C+ Sbjct: 736 NCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPDFA----RRGICPRGSQCQLL 791 Query: 435 QRSLKCH 455 R+ K H Sbjct: 792 HRNQKRH 798
>PF21B_HUMAN (Q96EK2) PHD finger protein 21B| Length = 531 Score = 29.6 bits (65), Expect = 5.8 Identities = 16/62 (25%), Positives = 26/62 (41%) Frame = +3 Query: 279 HTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHT 458 H C++ C T C +SC L P ++ +W+CPRC+++ Sbjct: 354 HCAACKRGANLQPCGT--CPGAYHLSC----LEPPLKTAPKGVWVCPRCQQKALKKDEGV 407 Query: 459 PW 464 PW Sbjct: 408 PW 409
>IF2_PSEPK (Q88DV7) Translation initiation factor IF-2| Length = 846 Score = 29.6 bits (65), Expect = 5.8 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -2 Query: 395 QASGARA*QGVAAAHPLASPAPRGVALRAPLA--LPASQGVALRARE 261 QA+G+ A AA P +PA VA AP+ PAS+ A RA E Sbjct: 137 QAAGSAAAAPAPAAKPEPAPAAAPVAAPAPVVADAPASEDAAARAAE 183
>HSP1_TRAPL (Q7JHM9) Sperm protamine P1| Length = 50 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +3 Query: 291 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 431 CR + RS C CRRR+R SCR YR+ RCRR Sbjct: 6 CRSQSRSRCCRPRRRCRRRRRRSCRARRRATRCCRRRYRL----RCRR 49
>HSP1_TRAGE (Q7JHM8) Sperm protamine P1| Length = 50 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +3 Query: 291 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 431 CR + RS C CRRR+R SCR YR+ RCRR Sbjct: 6 CRSQSRSRCCRPRRRCRRRRRRSCRARRRATRCCRRRYRL----RCRR 49
>HSP1_TRAFR (Q9GKQ4) Sperm protamine P1| Length = 50 Score = 29.3 bits (64), Expect = 7.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = +3 Query: 291 CRKRQRSPKCHTPW-CRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRR 431 CR + RS C CRRR+R SCR YR+ RCRR Sbjct: 6 CRSQSRSRCCRPRRRCRRRRRRSCRARRRATRCCRRRYRL----RCRR 49
>HSP1_CYNVA (Q8WP00) Sperm protamine P1| Length = 46 Score = 29.3 bits (64), Expect = 7.6 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 Query: 420 RCRRRQRSLKCHTPWRRRCQSMSCRR 497 RCRRR+RS + RRR SCRR Sbjct: 11 RCRRRRRSCRRRRRCRRRRARRSCRR 36
>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11| Length = 154 Score = 29.3 bits (64), Expect = 7.6 Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 8/107 (7%) Frame = -2 Query: 434 ASPAPWAQ----PNAVVQASGARA*QGVAAA----HPLASPAPRGVALRAPLALPASQGV 279 ASP+P A P Q+S A AAA HP A+P P G + AP SQG Sbjct: 7 ASPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTPMGAPMGAP-----SQGP 61 Query: 278 ALRAREGEVVQXXXXXXXXXXXXXXXXXAPGRSDVVDTPSRAQPPLG 138 L + G S P+ A P G Sbjct: 62 GLMKQMAATAGGVAIGSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAG 108
>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| (Fragment) Length = 1028 Score = 29.3 bits (64), Expect = 7.6 Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 16/102 (15%) Frame = +3 Query: 195 CQSPNSRRTPSCPSCQSLNYLTLSCPKCHTL-*CRKRQRS---------PKCHTPWCRRR 344 C P CP C+ Y+T+ P C L C +++ C T C+ R Sbjct: 433 CMHPVKVPGECCPVCEEPTYITIDPPACGELSNCSLKEKDCVYGFKLDHNGCRTCQCKIR 492 Query: 345 QRM------SCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKC 452 + + +C TL CP + + C C+ R R KC Sbjct: 493 EELCLGLKRAC--TLDCPFGFLTD--VHNCELCQCRPRPKKC 530
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 28.9 bits (63), Expect = 9.9 Identities = 26/76 (34%), Positives = 32/76 (42%) Frame = +3 Query: 297 KRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRRQRSLKCHTPWRRRC 476 KR+RSPK H R R+R S S + R + R R R + HTP RRR Sbjct: 1890 KRKRSPK-HRSKSRERKRKR---------SSSRDNRKTVRARSRTPSRRSRSHTPSRRRR 1939 Query: 477 QSMSCRRTLLCPSPRK 524 RR SP + Sbjct: 1940 SRSVGRRRSFSISPSR 1955
>GCDC_ACIFE (Q9ZAA7) Glutaconyl-CoA decarboxylase gamma subunit (EC 4.1.1.70)| (Biotin carrier) Length = 145 Score = 28.9 bits (63), Expect = 9.9 Identities = 22/61 (36%), Positives = 25/61 (40%) Frame = -2 Query: 458 GVALQAPLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAPLALPASQGV 279 G AP A AP A P A A+ AA P +PA A AP A PA+ Sbjct: 22 GAVTAAPAAPAAPAAAPAAAPVAAAP-------AAAPAPAPAAAPAAAPAPAAKPAAAAP 74 Query: 278 A 276 A Sbjct: 75 A 75
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +2 Query: 356 LPPHPAMPELPKPELPHL 409 LPP PA+P P+P PHL Sbjct: 992 LPPQPALPVRPEPLQPHL 1009
>FTSKL_DEIRA (Q9RXB5) Hypothetical ftsK-like protein DR0400| Length = 980 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -2 Query: 440 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVALRAP--LALPASQ 285 P++SP P P + AS + A A +PAP GV+ R LALP+ Q Sbjct: 452 PVSSPGPSPVPVSPASASVSHAAPWEEPAAGRPAPAPSGVSRRGATRLALPSEQ 505
>PRM2_PIG (P19757) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 92 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = +3 Query: 300 RQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPRCRRR 434 R RS CRRR+R +CRH R + R RCRRR Sbjct: 51 RHRSHTRRRRSCRRRRRRACRHRRHRRGCRRIRRR----RRCRRR 91
>I3MS_BRANA (Q00650) Microspore-specific protein I3| Length = 156 Score = 28.9 bits (63), Expect = 9.9 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -2 Query: 440 PLASPAPWAQPNAVVQASGARA*QGVAAAHPLASPAPRGVA 318 P A+ AP A P A A+ A A A P A+PAP+ A Sbjct: 112 PGAAAAPRAAPAAAPAAAPAAAPAAAPAPKPAAAPAPKPAA 152
>PRTC2_PORGI (P33437) Collagenase precursor (EC 3.4.-.-)| Length = 330 Score = 28.9 bits (63), Expect = 9.9 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +1 Query: 70 HGLLCLPRGSAALMQLHEQCSTTPRGGCAR 159 HG LC+ + LHE ++ RG CA+ Sbjct: 94 HGALCMAVSGKCYLSLHEHNTSANRGACAQ 123
>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3| Length = 948 Score = 28.9 bits (63), Expect = 9.9 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%) Frame = +3 Query: 264 SCPKCHTL*CRKRQRSPKCHTPWCRRRQRMSCRHTLLCPSSRSLNYRIWLCPR---CRRR 434 +CP H RK + +C + +HTLLCP R CPR C+ Sbjct: 741 NCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPDFA----RRGACPRGAQCQLL 796 Query: 435 QRSLKCHT 458 R+ K H+ Sbjct: 797 HRTQKRHS 804 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,652,710 Number of Sequences: 219361 Number of extensions: 1278669 Number of successful extensions: 4829 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4764 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
