Clone Name | bart16a06 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_196170.1| Oryza sativa (japonica cultivar-group) putative anthranilate N-benzoyltransferase (OSJNBa0032N04.2), mRNA Length = 1305 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 agtccatgggcaccgcccggctg 46 ||||||||||||||||| ||||| Sbjct: 883 agtccatgggcaccgccgggctg 861
>ref|XM_366837.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02913.4) partial mRNA Length = 3765 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagcaccaacacggccg 23 ||||||||||||||||||| Sbjct: 907 aaaagcaccaacacggccg 925
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 agtccatgggcaccgcccggctg 46 ||||||||||||||||| ||||| Sbjct: 17448 agtccatgggcaccgccgggctg 17426
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 agtccatgggcaccgcccggctg 46 ||||||||||||||||| ||||| Sbjct: 11699387 agtccatgggcaccgccgggctg 11699365
>gb|AY957390.1| Pseudomonas stutzeri NosL (nosL), NosY (nosY), and NosF (nosF) genes, complete cds; NosD-like (nosD) gene, complete sequence; and NosZ (nosZ) and NosR (nosR) genes, complete cds Length = 8000 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 aacacggccgagtccatgg 32 ||||||||||||||||||| Sbjct: 3337 aacacggccgagtccatgg 3355
>ref|XM_223196.3| PREDICTED: Rattus norvegicus WD repeat and FYVE domain containing 3 (predicted) (Wdfy3_predicted), mRNA Length = 11516 Score = 38.2 bits (19), Expect = 1.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 gagtccatgggcaccgccc 41 ||||||||||||||||||| Sbjct: 2488 gagtccatgggcaccgccc 2470
>dbj|AK066965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092H19, full insert sequence Length = 996 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 agtccatgggcaccgcccggctg 46 ||||||||||||||||| ||||| Sbjct: 486 agtccatgggcaccgccgggctg 464
>dbj|AK060656.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A04, full insert sequence Length = 1482 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 agtccatgggcaccgcccggctg 46 ||||||||||||||||| ||||| Sbjct: 972 agtccatgggcaccgccgggctg 950
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 1.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 agtccatgggcaccgcccggctg 46 ||||||||||||||||| ||||| Sbjct: 11706727 agtccatgggcaccgccgggctg 11706705
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 36.2 bits (18), Expect = 5.7 Identities = 24/26 (92%) Strand = Plus / Plus Query: 18 cggccgagtccatgggcaccgcccgg 43 ||||||||||||| ||||| |||||| Sbjct: 126702 cggccgagtccatcggcacggcccgg 126727
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 29 atgggcaccgcccggctg 46 |||||||||||||||||| Sbjct: 62483 atgggcaccgcccggctg 62500
>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence Length = 184296 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 aaggaaaagcaccaacac 18 |||||||||||||||||| Sbjct: 24530 aaggaaaagcaccaacac 24547
>gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosome 17, complete sequence Length = 188307 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 aaggaaaagcaccaacac 18 |||||||||||||||||| Sbjct: 37646 aaggaaaagcaccaacac 37629
>gb|AC002301.1|HUAC002301 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-328A3, complete sequence Length = 105485 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 aaggaaaagcaccaacac 18 |||||||||||||||||| Sbjct: 62526 aaggaaaagcaccaacac 62543
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 36.2 bits (18), Expect = 5.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 25 gtccatgggcaccgcccggctg 46 |||||||| ||||||||||||| Sbjct: 264809 gtccatggacaccgcccggctg 264830
>gb|AC023831.9| Homo sapiens chromosome 16 clone RP11-74E23, complete sequence Length = 174007 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 aaggaaaagcaccaacac 18 |||||||||||||||||| Sbjct: 42237 aaggaaaagcaccaacac 42220
>gb|AC007570.23| Homo sapiens 12 BAC RP11-968O1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167679 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 agtccatgggcaccgccc 41 |||||||||||||||||| Sbjct: 128933 agtccatgggcaccgccc 128916
>gb|AF363455.1| Porcine enterovirus 10 strain LP 54 polyprotein gene, complete cds Length = 7401 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 19 ggccgagtccatgggcac 36 |||||||||||||||||| Sbjct: 1615 ggccgagtccatgggcac 1598
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 24 agtccatgggcaccgccc 41 |||||||||||||||||| Sbjct: 109620 agtccatgggcaccgccc 109603
>gb|AC156459.2| Mus musculus BAC clone RP23-269A9 from chromosome 13, complete sequence Length = 188142 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 aaggaaaagcaccaacac 18 |||||||||||||||||| Sbjct: 86738 aaggaaaagcaccaacac 86721
>gb|AC009133.7| Homo sapiens chromosome 16 clone RP11-504I2, complete sequence Length = 174363 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 aaggaaaagcaccaacac 18 |||||||||||||||||| Sbjct: 101484 aaggaaaagcaccaacac 101467
>ref|XM_321156.2| Anopheles gambiae str. PEST ENSANGP00000007930 (ENSANGG00000005985), partial mRNA Length = 2094 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 29 atgggcaccgcccggctg 46 |||||||||||||||||| Sbjct: 1761 atgggcaccgcccggctg 1744
>gb|DQ075325.1| Synechococcus sp. UW92 assimilatory nitrate reductase (narB) gene, partial cds Length = 657 Score = 36.2 bits (18), Expect = 5.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 gcaccaacacggccgagt 26 |||||||||||||||||| Sbjct: 116 gcaccaacacggccgagt 133 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 250,257 Number of Sequences: 3902068 Number of extensions: 250257 Number of successful extensions: 57999 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57916 Number of HSP's gapped (non-prelim): 83 length of query: 46 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 26 effective length of database: 17,155,003,908 effective search space: 446030101608 effective search space used: 446030101608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)