>gb|AC154815.2| Mus musculus BAC clone RP24-534C22 from chromosome 9, complete sequence
          Length = 173315

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    caactaaacagtatgatgacac 53
             ||||||||||||||||||||||
Sbjct: 90798 caactaaacagtatgatgacac 90777

>gb|AF121782.1| Homo sapiens chromosome 21q22.3 PAC 206A10, complete sequence
          Length = 142742

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 33    aactaaacagtatgatgacacc 54
             ||||||||||||||||||||||
Sbjct: 60396 aactaaacagtatgatgacacc 60375

>emb|AL163280.2|HS21C080 Homo sapiens chromosome 21 segment HS21C080
          Length = 340000

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 33     aactaaacagtatgatgacacc 54
              ||||||||||||||||||||||
Sbjct: 284576 aactaaacagtatgatgacacc 284555

>gb|AC154319.2| Mus musculus BAC clone RP23-331I13 from chromosome 9, complete sequence
          Length = 196331

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    caactaaacagtatgatgacac 53
             ||||||||||||||||||||||
Sbjct: 31960 caactaaacagtatgatgacac 31939

>dbj|BS000162.1| Pan troglodytes chromosome 22 clone:PTB-060F12, map 22, complete
             sequences
          Length = 156288

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 33    aactaaacagtatgatgacacc 54
             ||||||||||||||||||||||
Sbjct: 10692 aactaaacagtatgatgacacc 10671

>emb|AL954228.1|CH179K04 Pan troglodytes chromosome 22 BAC CH251-179K04, complete sequence
          Length = 182532

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 33    aactaaacagtatgatgacacc 54
             ||||||||||||||||||||||
Sbjct: 28595 aactaaacagtatgatgacacc 28574

>gb|AC151586.3| Nematostella vectensis clone JGIAFIN-297A12, complete sequence
          Length = 39239

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    acagtatgatgacaccacac 58
             ||||||||||||||||||||
Sbjct: 18204 acagtatgatgacaccacac 18223

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 6        acattgcaaatgttgtattc 25
                ||||||||||||||||||||
Sbjct: 18759035 acattgcaaatgttgtattc 18759016

>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21,
              complete sequence
          Length = 160456

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      acattgcaaatgttgtattc 25
              ||||||||||||||||||||
Sbjct: 108198 acattgcaaatgttgtattc 108179

>gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, complete sequence
          Length = 250096

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    caaatgttgtattccacaac 31
             ||||||||||||||||||||
Sbjct: 28635 caaatgttgtattccacaac 28654

>gb|AC149064.3| Mus musculus BAC clone RP23-140I7 from 18, complete sequence
          Length = 183953

 Score = 40.1 bits (20), Expect = 0.54
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     caaatgttgtattccacaac 31
              ||||||||||||||||||||
Sbjct: 117474 caaatgttgtattccacaac 117493

>emb|AL357150.7| Human DNA sequence from clone RP11-122C9 on chromosome 1p21.2-22.1
             Contains a ribosomal protein L7 (RPL7) pseudogene, the
             PTBP2 gene for polypyrimidine tract binding protein 2 and
             a CpG island, complete sequence
          Length = 187378

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     gacattgcaaatgttgtat 23
             |||||||||||||||||||
Sbjct: 70048 gacattgcaaatgttgtat 70066

>ref|XM_623851.1| PREDICTED: Apis mellifera similar to CG5484-PC, isoform C
           (LOC551459), mRNA
          Length = 1179

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 13  aaatgttgtattccacaaccaactaaa 39
           ||||||||| ||||| |||||||||||
Sbjct: 446 aaatgttgttttccagaaccaactaaa 420

>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence
          Length = 128575

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    gcaaatgttgtattccac 28
             ||||||||||||||||||
Sbjct: 96478 gcaaatgttgtattccac 96495

>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence
          Length = 157258

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    gcaaatgttgtattccac 28
             ||||||||||||||||||
Sbjct: 52926 gcaaatgttgtattccac 52943

>emb|AL356106.6| Human DNA sequence from clone RP4-685B19 on chromosome 1q34.13-34.3,
             complete sequence
          Length = 52479

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     acattgcaaatgttgtat 23
             ||||||||||||||||||
Sbjct: 36674 acattgcaaatgttgtat 36657

>emb|AL354830.8| Human DNA sequence from clone RP11-193G17 on chromosome 13 Contains the
             gene for a novel protein similar to prothymosin, complete
             sequence
          Length = 152555

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 27    acaaccaactaaacagta 44
             ||||||||||||||||||
Sbjct: 34474 acaaccaactaaacagta 34457

>gb|AC147816.2| Xenopus tropicalis clone CH216-106C24, complete sequence
          Length = 152642

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    tgcaaatgttgtattcca 27
             ||||||||||||||||||
Sbjct: 47973 tgcaaatgttgtattcca 47990

>emb|BX469929.9| Zebrafish DNA sequence from clone DKEYP-24B8 in linkage group 8, complete
              sequence
          Length = 149287

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 17     gttgtattccacaaccaactaaacag 42
              ||||||||||| || |||||||||||
Sbjct: 125139 gttgtattccaaaagcaactaaacag 125164

>gb|AC117516.5| Homo sapiens 3 BAC RP11-845C18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172997

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 24    tccacaaccaactaaaca 41
             ||||||||||||||||||
Sbjct: 49673 tccacaaccaactaaaca 49690

>emb|AL670778.15| Mouse DNA sequence from clone RP23-234A24 on chromosome X, complete
            sequence
          Length = 201720

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 11   gcaaatgttgtattccac 28
            ||||||||||||||||||
Sbjct: 4542 gcaaatgttgtattccac 4559

>emb|BX950864.17| Zebrafish DNA sequence from clone DKEY-158B13 in linkage group 19,
             complete sequence
          Length = 185429

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 6     acattgcaaatgttgtat 23
             ||||||||||||||||||
Sbjct: 75199 acattgcaaatgttgtat 75182

>emb|BX005319.6| Zebrafish DNA sequence from clone DKEY-10F23, complete sequence
          Length = 225639

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 7      cattgcaaatgttgtatt 24
              ||||||||||||||||||
Sbjct: 225530 cattgcaaatgttgtatt 225513

>dbj|AB071182.1| Bombyx mori BmNOS mRNA for nitric oxide synthase, complete cds
          Length = 4698

 Score = 36.2 bits (18), Expect = 8.4
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 37   aaacagtatgatgacacc 54
            ||||||||||||||||||
Sbjct: 2101 aaacagtatgatgacacc 2118


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 467,153
Number of Sequences: 3902068
Number of extensions: 467153
Number of successful extensions: 30899
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30854
Number of HSP's gapped (non-prelim): 45
length of query: 59
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 38
effective length of database: 17,151,101,840
effective search space: 651741869920
effective search space used: 651741869920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)