ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart16a02 |
|---|---|
| Clone Library Name | barley_pub |
>ASPG2_ARATH (Q8GXG1) Probable L-asparaginase 2 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 2) [Contains: L-asparaginase 2 alpha subunit; L-asparaginase 2 beta subunit] Length = 325 Score = 203 bits (516), Expect = 3e-52 Identities = 97/131 (74%), Positives = 112/131 (85%) Frame = +2 Query: 158 MARWAIAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELET 337 M WAIA+HGGAG+DPNLP RQEEAK++L RCL +G+ LR+ +A+DVVE V+RELET Sbjct: 1 MGGWAIAVHGGAGIDPNLPAERQEEAKQLLTRCLNLGIIALRSNVSAIDVVELVIRELET 60 Query: 338 DPCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYL 517 DP FNSGRGSALT GTVEMEASIMDG RRC AVSG++TV+NP+SLAR VMDKSPHSYL Sbjct: 61 DPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGITTVKNPISLARLVMDKSPHSYL 120 Query: 518 AFHGAEDFARQ 550 AF GAEDFAR+ Sbjct: 121 AFSGAEDFARK 131
>ASPG_LUPLU (Q9ZSD6) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 156 bits (394), Expect = 4e-38 Identities = 81/132 (61%), Positives = 98/132 (74%), Gaps = 1/132 (0%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M W+IA+HGGAG P +LP R++ + L CLQ+GV+ L+A LDVVE VVRELE Sbjct: 1 MGGWSIALHGGAGDIPFSLPPERRKPREEGLRHCLQIGVEALKAQKPPLDVVELVVRELE 60 Query: 335 TDPCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSY 514 FN+G GS LT +GTVEMEASIMDG +C AVSG+STV NP+SLAR VMDK+PH Y Sbjct: 61 NIEHFNAGIGSVLTNSGTVEMEASIMDGNTMKCGAVSGLSTVLNPISLARLVMDKTPHIY 120 Query: 515 LAFHGAEDFARQ 550 LAF GA+DFA+Q Sbjct: 121 LAFQGAQDFAKQ 132
>ASPG_LUPAN (P30364) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 156 bits (394), Expect = 4e-38 Identities = 80/132 (60%), Positives = 99/132 (75%), Gaps = 1/132 (0%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M W+IA+HGGAG P +LP R++ + L CLQ+GV+ L++ LDVVE VVRELE Sbjct: 1 MGGWSIALHGGAGDIPFSLPPERRQPREEGLRHCLQIGVEALKSQKPPLDVVELVVRELE 60 Query: 335 TDPCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSY 514 FN+G GS LT +GTVEMEASIMDG+ +C AVSG+STV NP+SLAR VMDK+PH Y Sbjct: 61 NIQHFNAGIGSVLTNSGTVEMEASIMDGKTMKCGAVSGLSTVLNPISLARLVMDKTPHIY 120 Query: 515 LAFHGAEDFARQ 550 LAF GA+DFA+Q Sbjct: 121 LAFQGAQDFAKQ 132
>ASPG1_ARATH (P50287) L-asparaginase 1 precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase 1) [Contains: L-asparaginase 1 alpha subunit; L-asparaginase 1 beta subunit] Length = 315 Score = 153 bits (387), Expect = 3e-37 Identities = 78/131 (59%), Positives = 96/131 (73%), Gaps = 1/131 (0%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M WAIA+HGGAG P +LP+ R+ + L CL +G+ L++G LDV E VVRELE Sbjct: 1 MVGWAIALHGGAGDIPIDLPDERRIPRESALRHCLDLGISALKSGKPPLDVAELVVRELE 60 Query: 335 TDPCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSY 514 P FN+G+GS LT GTVEMEASIMDG+ +RC AVSG++TV NP+SLAR VM+K+PH Y Sbjct: 61 NHPDFNAGKGSVLTAQGTVEMEASIMDGKTKRCGAVSGLTTVVNPISLARLVMEKTPHIY 120 Query: 515 LAFHGAEDFAR 547 LAF AE FAR Sbjct: 121 LAFDAAEAFAR 131
>ASPG_LUPAL (P50288) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] Length = 325 Score = 150 bits (379), Expect = 2e-36 Identities = 76/132 (57%), Positives = 97/132 (73%), Gaps = 1/132 (0%) Frame = +2 Query: 158 MARWAIAIHGGAGVDP-NLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELE 334 M W+IA+HGGAG P +LP R++ + L CLQ+G++ L+A LDVVE VVRELE Sbjct: 1 MGGWSIALHGGAGDIPFSLPPERRKPREEGLRHCLQIGIEALKAQNPPLDVVELVVRELE 60 Query: 335 TDPCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSY 514 FN+G GS LT +GTVEMEASIMDG +C AVSG++TV NP+SLAR+VMDK+PH + Sbjct: 61 NIQHFNAGIGSVLTNSGTVEMEASIMDGNTMKCGAVSGLNTVMNPISLARQVMDKTPHIF 120 Query: 515 LAFHGAEDFARQ 550 LAF GA+D +Q Sbjct: 121 LAFQGAQDLGKQ 132
>ASPG_LUPAR (P30362) L-asparaginase precursor (EC 3.5.1.1) (L-asparagine| amidohydrolase) [Contains: L-asparaginase alpha subunit; L-asparaginase beta subunit] (Fragment) Length = 306 Score = 140 bits (352), Expect = 3e-33 Identities = 69/113 (61%), Positives = 87/113 (76%) Frame = +2 Query: 212 PEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDPCFNSGRGSALTRAGTV 391 P R++ + L CLQ+GV+ L+A + LDVVE VVRELE + FN+G GS LT +GTV Sbjct: 1 PPERRKPREEGLRHCLQIGVEALKARKSPLDVVELVVRELENNEHFNAGIGSVLTNSGTV 60 Query: 392 EMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLAFHGAEDFARQ 550 EMEASIMDG+ +C AVSG+STV NP+SLAR VM+K+PH YLAF GA+DFA+Q Sbjct: 61 EMEASIMDGKSMKCGAVSGLSTVLNPISLARLVMEKTPHMYLAFQGAQDFAKQ 113
>ASGX_ECOLI (P37595) Putative L-asparaginase precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase) Length = 321 Score = 104 bits (259), Expect = 2e-22 Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 2/131 (1%) Frame = +2 Query: 158 MARWAIAIHGGAGVDPNLPEHRQEEAKRV--LARCLQVGVDLLRAGATALDVVEAVVREL 331 M + IAIHGGAG Q+E + + L+ ++ G +L AG +ALDVV VR L Sbjct: 1 MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLL 60 Query: 332 ETDPCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHS 511 E P FN+G G+ TR T E++A +MDG + AV+GVS +RNPV AR VM++SPH Sbjct: 61 EECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHV 120 Query: 512 YLAFHGAEDFA 544 + GAE+FA Sbjct: 121 MMIGEGAENFA 131
>ASGX_PYRHO (O57971) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 305 Score = 94.0 bits (232), Expect = 3e-19 Identities = 56/126 (44%), Positives = 76/126 (60%) Frame = +2 Query: 170 AIAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDPCF 349 AI +HGGAG E R + + + VG LR G+ ALD VE ++ LE +P F Sbjct: 3 AIIVHGGAGTIKK--EERIPKVIEGVKEAVIVGWKELRKGS-ALDAVEEAIKVLEDNPIF 59 Query: 350 NSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLAFHG 529 N+G GS LT G VEM+A+IM G+ AV+G+ V+NP+S+AR+VM+K+ H L G Sbjct: 60 NAGTGSVLTIDGKVEMDAAIMRGKTLEAGAVAGIWGVKNPISVARKVMEKTDHVLLVGEG 119 Query: 530 AEDFAR 547 A FAR Sbjct: 120 AVKFAR 125
>ASGX_PYRAB (Q9V262) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 305 Score = 92.4 bits (228), Expect = 7e-19 Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 3/129 (2%) Frame = +2 Query: 170 AIAIHGGAGV---DPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETD 340 AI +HGGAG + +P+ + + VLA G L+ G+ ALD VE ++ LE + Sbjct: 3 AIIVHGGAGTIRKEERIPKVLEGVREAVLA-----GWKELKKGS-ALDAVEEAIKVLEDN 56 Query: 341 PCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 P FN+G GS LT G VEM+A+IM G+ AV+G+ V+NP+S+AR+VM+K+ H L Sbjct: 57 PIFNAGTGSVLTIDGKVEMDAAIMRGKTLEAGAVAGIWGVKNPISVARKVMEKTDHVLLV 116 Query: 521 FHGAEDFAR 547 GA FAR Sbjct: 117 GEGAVKFAR 125
>ASGX_PYRKO (Q5JHT1) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 306 Score = 91.7 bits (226), Expect = 1e-18 Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 3/129 (2%) Frame = +2 Query: 170 AIAIHGGAGV---DPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETD 340 AI +HGGAG + +P+ + + VLA G L+ G+ ALD VE V+ LE + Sbjct: 3 AIIVHGGAGTIRKEERIPKVIEGVREAVLA-----GWRELKRGS-ALDAVEEAVKALEDN 56 Query: 341 PCFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 P FN+G GS LT G VEM+A+IM G+ AV+G+ V+NP+S+AR+VM+K+ H L Sbjct: 57 PIFNAGTGSVLTLDGKVEMDAAIMRGKTLDAGAVAGIWGVKNPISVARKVMEKTDHVLLI 116 Query: 521 FHGAEDFAR 547 GA FAR Sbjct: 117 GEGAVKFAR 125
>ASGX_PYRFU (Q8U4E6) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 306 Score = 90.1 bits (222), Expect = 4e-18 Identities = 55/126 (43%), Positives = 75/126 (59%) Frame = +2 Query: 170 AIAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDPCF 349 AI +HGGAG E R + + + G L+ G+ ALD VE V+ LE +P F Sbjct: 3 AIIVHGGAGTIRK--EERIPKIIEGVREAVLTGWRELKKGS-ALDAVEEAVKVLEDNPLF 59 Query: 350 NSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLAFHG 529 N+G GS LT G VEM+A+IM G+ AV+G+ V+NP+S+AR+VM+K+ H L G Sbjct: 60 NAGTGSVLTLDGKVEMDAAIMRGKTLDAGAVAGIWGVKNPISVARKVMEKTDHVLLIGEG 119 Query: 530 AEDFAR 547 A FAR Sbjct: 120 AVKFAR 125
>TASP1_HUMAN (Q9H6P5) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/107 (41%), Positives = 62/107 (57%) Frame = +2 Query: 173 IAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDPCFN 352 + +H GAG E + +E K V R Q ++ L+AGA A D V A + ELE P N Sbjct: 44 VLVHAGAGYHS---ESKAKEYKHVCKRACQKAIEKLQAGALATDAVTAALVELEDSPFTN 100 Query: 353 SGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVM 493 +G GS L G +E +ASIMDG+ AV +S ++NPVS+A R++ Sbjct: 101 AGMGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVANRLL 147
>TASP1_MOUSE (Q8R1G1) Threonine aspartase 1 (EC 3.4.25.-) (Taspase-1) [Contains:| Threonine aspartase subunit alpha; Threonine aspartase subunit beta] Length = 420 Score = 80.1 bits (196), Expect = 4e-15 Identities = 44/107 (41%), Positives = 62/107 (57%) Frame = +2 Query: 173 IAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDPCFN 352 + +H GAG E + +E K V R Q ++ L+AGA A D V A + ELE P N Sbjct: 44 VLVHAGAGYHS---ESKAKEYKHVCKRACQKAIEKLQAGALATDAVAAALVELEDSPFTN 100 Query: 353 SGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVM 493 +G GS L G +E +ASIMDG+ AV +S ++NPVS+A R++ Sbjct: 101 AGIGSNLNLLGEIECDASIMDGKSLNFGAVGALSGIKNPVSVAHRLL 147
>ASGX_SYNY3 (P74383) Putative L-asparaginase (EC 3.5.1.1) (L-asparagine| amidohydrolase) Length = 329 Score = 65.5 bits (158), Expect = 1e-10 Identities = 42/126 (33%), Positives = 67/126 (53%) Frame = +2 Query: 173 IAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDPCFN 352 + IHGGA + + ++ L + + + L AG +A+D V LE +P FN Sbjct: 5 LIIHGGASSLDD--KGGLATVRQSLHQIVAAVYETLTAGGSAMDAVVQGCELLENEPRFN 62 Query: 353 SGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLAFHGA 532 +G GS L G V M AS+MDG + S V VS ++NP+ +A+ + ++ L+ +GA Sbjct: 63 AGTGSVLQSDGQVRMSASLMDGDRQNFSGVINVSRIKNPIQMAQFLQGQTDR-ILSDYGA 121 Query: 533 EDFARQ 550 D AR+ Sbjct: 122 ADLARE 127
>ASPG4_ARATH (O65268) Putative L-asparaginase 4 precursor (EC 3.5.1.1)| (L-asparagine amidohydrolase 4) [Contains: L-asparaginase 4 alpha subunit; L-asparaginase 4 beta subunit] Length = 407 Score = 65.1 bits (157), Expect = 1e-10 Identities = 39/106 (36%), Positives = 51/106 (48%) Frame = +2 Query: 164 RWAIAIHGGAGVDPNLPEHRQEEAKRVLARCLQVGVDLLRAGATALDVVEAVVRELETDP 343 R+ +A+H GAG E R CL L + +D V A ++ LE DP Sbjct: 11 RFFVAVHVGAGYHAAANEKALRSVMR--RACLAASTILRQDSGECIDAVSAAIQVLEDDP 68 Query: 344 CFNSGRGSALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLA 481 N+GRGS LT G VE +AS+MDG V V VRN + +A Sbjct: 69 STNAGRGSNLTEDGHVECDASLMDGDSGMFGGVGAVPGVRNAIKIA 114
>ASPG_FLAME (Q47898) N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 340 Score = 60.8 bits (146), Expect = 2e-09 Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Frame = +2 Query: 275 LLRAGATALDVVEAVVRELETDPCFNS-GRGSALTRAGTVEMEASIMDGRGRRCSAVSGV 451 +L G ALD VE VR +E DP S G G R G V ++A IMD +V+ + Sbjct: 69 VLSKGGKALDAVEKGVRLVEDDPTERSVGYGGRPDRDGRVTLDACIMD-ENYNIGSVACM 127 Query: 452 STVRNPVSLARRVMDKSPHSYLAFHGAEDFA 544 ++NP+S+AR VM+K+PH L GA +FA Sbjct: 128 EHIKNPISVARAVMEKTPHVMLVGDGALEFA 158
>ASPG_MOUSE (Q64191) N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 346 Score = 52.4 bits (124), Expect = 9e-07 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Frame = +2 Query: 278 LRAGATALDVVEAVVRELETDPCFNS-GRGSALTRAGTVEMEASIMDGRGRRCSAVSGVS 454 L +G +ALD VE E + C + G G + G ++A IMDG AV G+ Sbjct: 47 LLSGGSALDAVENGCAVCEKEQCDGTVGFGGSPDEGGETTLDAMIMDGTAMDVGAVGGLR 106 Query: 455 TVRNPVSLARRVMDKSPHSYLAFHGAEDFA 544 ++N + +ARRV++ + H+ L A FA Sbjct: 107 RIKNAIGVARRVLEHTTHTLLVGDSATKFA 136
>ASPG_MACFA (Q4R6C4) N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase precursor| (EC 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosy Length = 346 Score = 51.2 bits (121), Expect = 2e-06 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Frame = +2 Query: 278 LRAGATALDVVEAVVRELETDPCFNS-GRGSALTRAGTVEMEASIMDGRGRRCSAVSGVS 454 L +G +ALD VE+ ET+ C S G G + G ++A IM+G AV + Sbjct: 47 LASGGSALDAVESGCAMCETEQCGGSVGFGGSPDELGETTLDAMIMEGTTMDVGAVGDLR 106 Query: 455 TVRNPVSLARRVMDKSPHSYLAFHGAEDFA 544 ++N + +AR+V++ + H+ L A FA Sbjct: 107 RIKNAIGVARKVLEHTTHTLLVGESATKFA 136
>ASPG_SPOFR (O02467) N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (EC| 3.5.1.26) (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) [Contains: Glycosylasparaginase alpha chain; Glycosylasparagin Length = 320 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Frame = +2 Query: 272 DLLRAGATALDVVEAVVRELETDPCFNS-GRGSALTRAGTVEMEASIMDGRGRRCSAVSG 448 ++L+ ALD VE E + C + G G + G ++A IMDG AV+ Sbjct: 22 EVLKDEGKALDAVEQGGIVCENEQCDRTVGYGGSPDEDGETTLDAFIMDGSTMNVGAVAA 81 Query: 449 VSTVRNPVSLARRVMDKSPHSYLAFHGAEDFA 544 + +++ +S+AR VM+ + HS+LA A FA Sbjct: 82 LRRIKSAISVARHVMEYTTHSFLAGELATKFA 113
>CCA_XYLFT (Q87DS9) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 416 Score = 32.3 bits (72), Expect = 0.92 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 337 RLQLPHHGLHHVQRGGAGAQQVDAHLQAPGQHPLGLLLAVLRQVRVHARAAVDGNGPARH 158 R PHH +H QRG A QQ+ L+ P + L+A + VH + + N Sbjct: 266 RATWPHHPMHE-QRGMAPTQQLSERLKVPRNYQQLALIACREHLNVHRLSKLHDNTVYEL 324 Query: 157 VRAC 146 ++ C Sbjct: 325 LQRC 328
>FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (Protein fat)| Length = 5147 Score = 32.3 bits (72), Expect = 0.92 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +2 Query: 365 SALTRAGTVEMEASIMDGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLAFHGA 532 ++L+ G S++DGR A+SG T RNP + + PH+Y F + Sbjct: 4995 NSLSGDGKYSTSKSLLDGRSPVSRALSGGETSRNPPTTVVKTPPIPPHAYDGFESS 5050
>CCA_XYLFA (Q9PDL7) Multifunctional CCA protein [Includes: CCA-adding enzyme| (EC 2.7.7.25) (EC 2.7.7.21) (tRNA nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT); 2'-nucleotidase (EC 3.1.3.-); 2',3'-cycli Length = 416 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -3 Query: 337 RLQLPHHGLHHVQRGGAGAQQVDAHLQAPGQHPLGLLLAVLRQVRVH 197 R PHH +H QRG A QQ+ L+ P + L+A + VH Sbjct: 266 RATWPHHPMHE-QRGMAPTQQLSERLKVPRDYQQLALIACREHLNVH 311
>YIGI_SHIFL (P0ADP4) Hypothetical protein yigI| Length = 155 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 371 LTRAGTVEMEASIM-DGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 L+R GT+++ + GRG R +A S + N V++AR + Y+A Sbjct: 96 LSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIA 146
>YIGI_SALTY (P0A1U0) Hypothetical protein yigI| Length = 155 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 371 LTRAGTVEMEASIM-DGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 L+R GT+++ + GRG R +A S + N V++AR + Y+A Sbjct: 96 LSRMGTIDLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIA 146
>YIGI_SALTI (P0A1U1) Hypothetical protein yigI| Length = 155 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 371 LTRAGTVEMEASIM-DGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 L+R GT+++ + GRG R +A S + N V++AR + Y+A Sbjct: 96 LSRMGTIDLRVDYLRPGRGNRFTATSSLLRAGNKVAVARVELHNEDQLYIA 146
>YIGI_ECOLI (P0ADP2) Hypothetical protein yigI| Length = 155 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 371 LTRAGTVEMEASIM-DGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 L+R GT+++ + GRG R +A S + N V++AR + Y+A Sbjct: 96 LSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIA 146
>YIGI_ECOL6 (P0ADP3) Hypothetical protein yigI| Length = 155 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = +2 Query: 371 LTRAGTVEMEASIM-DGRGRRCSAVSGVSTVRNPVSLARRVMDKSPHSYLA 520 L+R GT+++ + GRG R +A S + N V++AR + Y+A Sbjct: 96 LSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIA 146
>UVRC_PSEFL (P32966) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 607 Score = 30.0 bits (66), Expect = 4.5 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Frame = +2 Query: 254 CLQVGVDLLRAGATALDVVEAVVRELETDPCFNSGRGSALT--RAGTVEMEASIMDGRGR 427 CLQ + +A L E ++ F GR +ALT + +E AS +D Sbjct: 166 CLQYQIKRCKAPCVGLVEAEVYAEDVRHSVMFLEGRSNALTDELSAGMEQAASTLD---- 221 Query: 428 RCSAVSGVSTVRNPVSLARRVMDK 499 + +R+ +SL RRV D+ Sbjct: 222 ----FEKAAELRDQISLLRRVQDQ 241
>UVRC_PSEF5 (Q4KAR9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 607 Score = 29.6 bits (65), Expect = 5.9 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Frame = +2 Query: 254 CLQVGVDLLRAGATALDVVEAVVRELETDPCFNSGRGSALTRAGTVEME--ASIMDGRGR 427 CLQ + +A L E ++ F GR +ALT + ME AS +D Sbjct: 166 CLQYQIKRCKAPCVGLVEPEVYAEDVRHSVMFLEGRSNALTDELSTAMEAAASTLD---- 221 Query: 428 RCSAVSGVSTVRNPVSLARRVMDK 499 + +R+ +SL RRV D+ Sbjct: 222 ----FEKAAELRDQISLLRRVQDQ 241
>BRN3_CHICK (Q91998) Brain-specific homeobox/POU domain protein 3 (Brn-3)| Length = 341 Score = 29.6 bits (65), Expect = 5.9 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = +1 Query: 94 THRSAFRHLAQHTTTVTYTHAHGALGH 174 +H SA H+A H+ + +H HG H Sbjct: 149 SHMSAINHMAHHSQPMNMSHPHGLASH 175
>UVRC_PSEPF (Q3KBQ0) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 607 Score = 29.3 bits (64), Expect = 7.8 Identities = 21/82 (25%), Positives = 35/82 (42%) Frame = +2 Query: 254 CLQVGVDLLRAGATALDVVEAVVRELETDPCFNSGRGSALTRAGTVEMEASIMDGRGRRC 433 CLQ + +A L E ++ F GR ALT + ME + ++ R Sbjct: 166 CLQYQIKRCKAPCVGLVEPEVYAEDVRHSVMFLEGRSHALTNELSTAMEEAAINLEFER- 224 Query: 434 SAVSGVSTVRNPVSLARRVMDK 499 + +R+ ++L RRV D+ Sbjct: 225 -----AAELRDQIALLRRVQDQ 241 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,485,021 Number of Sequences: 219361 Number of extensions: 946054 Number of successful extensions: 3639 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3631 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
