ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart15h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNAJ_METMA (P35515) Chaperone protein dnaJ 30 2.6
2DNAJ2_STRCO (Q9RDD7) Chaperone protein dnaJ 2 28 5.7
3DNAJ2_STRAW (Q82BY4) Chaperone protein dnaJ 2 28 5.7

>DNAJ_METMA (P35515) Chaperone protein dnaJ|
          Length = 389

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = -2

Query: 42  CPECSGAGRGRSRR 1
           CP CSGAGR RSRR
Sbjct: 201 CPTCSGAGRVRSRR 214



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>DNAJ2_STRCO (Q9RDD7) Chaperone protein dnaJ 2|
          Length = 378

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 42  CPECSGAGRGRSRR 1
           CPEC+G GR RSRR
Sbjct: 200 CPECAGDGRVRSRR 213



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>DNAJ2_STRAW (Q82BY4) Chaperone protein dnaJ 2|
          Length = 378

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -2

Query: 42  CPECSGAGRGRSRR 1
           CPEC+G GR RSRR
Sbjct: 200 CPECAGDGRVRSRR 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,706,971
Number of Sequences: 219361
Number of extensions: 19312
Number of successful extensions: 133
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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