Clone Name | bart15h06 |
---|---|
Clone Library Name | barley_pub |
>gb|AF321857.1|AF321857 Lolium rigidum clone FHH-y putative cytochrome P450 mRNA, complete cds Length = 1810 Score = 44.1 bits (22), Expect = 0.021 Identities = 31/34 (91%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctccactacattctgggcaa 43 |||||||||||||| |||||||| |||| ||||| Sbjct: 72 ccttcctcttcctggtccactacgttctcggcaa 105
>gb|AF321856.1|AF321856 Lolium rigidum clone FHH-t putative cytochrome P450 mRNA, complete cds Length = 1775 Score = 44.1 bits (22), Expect = 0.021 Identities = 31/34 (91%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctccactacattctgggcaa 43 |||||||||||||| |||||||| |||| ||||| Sbjct: 66 ccttcctcttcctggtccactacgttctcggcaa 99
>gb|AF321855.1|AF321855 Lolium rigidum clone FHH-v putative cytochrome P450 mRNA, complete cds Length = 1795 Score = 44.1 bits (22), Expect = 0.021 Identities = 31/34 (91%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctccactacattctgggcaa 43 |||||||||||||| |||||||| |||| ||||| Sbjct: 66 ccttcctcttcctggtccactacgttctcggcaa 99
>dbj|AB159039.1| Lolium rigidum mRNA for P450, complete cds, clone:CYP81B1v3 Length = 1554 Score = 44.1 bits (22), Expect = 0.021 Identities = 31/34 (91%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctccactacattctgggcaa 43 |||||||||||||| |||||||| |||| ||||| Sbjct: 35 ccttcctcttcctggtccactacgttctcggcaa 68
>dbj|AB159038.1| Lolium rigidum mRNA for P450, complete cds, clone:CYP81B1v2 Length = 1554 Score = 44.1 bits (22), Expect = 0.021 Identities = 31/34 (91%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctccactacattctgggcaa 43 |||||||||||||| |||||||| |||| ||||| Sbjct: 35 ccttcctcttcctggtccactacgttctcggcaa 68
>dbj|AB159037.1| Lolium rigidum mRNA for P450, complete cds, clone:CYP81B1v1 Length = 1554 Score = 44.1 bits (22), Expect = 0.021 Identities = 31/34 (91%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctccactacattctgggcaa 43 |||||||||||||| |||||||| |||| ||||| Sbjct: 35 ccttcctcttcctggtccactacgttctcggcaa 68
>ref|XM_527554.1| PREDICTED: Pan troglodytes similar to solute carrier family 22 member 1 isoform b; organic cation transporter 1 (LOC472177), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 898 accttcctcttcctgctctactac 921
>gb|AC133191.3| Mus musculus chromosome 18 clone RP23-390K15, complete sequence Length = 212060 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 ccttgaccttcctcttcctgctcc 27 |||||||||||||| ||||||||| Sbjct: 20325 ccttgaccttcctcctcctgctcc 20302
>ref|XM_861483.1| PREDICTED: Canis familiaris similar to CD97 antigen isoform 1 precursor, transcript variant 5 (LOC484904), mRNA Length = 2562 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctccact 30 |||||||||||||||||||| Sbjct: 2249 cttcctcttcctgctccact 2268
>ref|XM_861470.1| PREDICTED: Canis familiaris similar to CD97 antigen isoform 1 precursor, transcript variant 4 (LOC484904), mRNA Length = 2748 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctccact 30 |||||||||||||||||||| Sbjct: 2435 cttcctcttcctgctccact 2454
>ref|XM_847831.1| PREDICTED: Canis familiaris similar to CD97 antigen isoform 1 precursor, transcript variant 2 (LOC484904), mRNA Length = 2782 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctccact 30 |||||||||||||||||||| Sbjct: 2469 cttcctcttcctgctccact 2488
>ref|XM_542020.2| PREDICTED: Canis familiaris similar to CD97 antigen isoform 1 precursor, transcript variant 1 (LOC484904), mRNA Length = 2836 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctccact 30 |||||||||||||||||||| Sbjct: 2523 cttcctcttcctgctccact 2542
>ref|XM_861424.1| PREDICTED: Canis familiaris similar to CD97 antigen isoform 1 precursor, transcript variant 3 (LOC484904), mRNA Length = 2689 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctccact 30 |||||||||||||||||||| Sbjct: 2376 cttcctcttcctgctccact 2395
>gb|AC113528.8| Mus musculus chromosome 18, clone RP23-419F17, complete sequence Length = 217309 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 ccttgaccttcctcttcctgctcc 27 |||||||||||||| ||||||||| Sbjct: 69585 ccttgaccttcctcctcctgctcc 69562
>ref|XM_541185.2| PREDICTED: Canis familiaris similar to solute carrier family 22 member 1 isoform a, transcript variant 1 (LOC484068), mRNA Length = 1608 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 820 accttcctcttcctgctctactac 843
>ref|XM_845878.1| PREDICTED: Canis familiaris similar to solute carrier family 22 member 1 isoform a, transcript variant 3 (LOC484068), mRNA Length = 2150 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 814 accttcctcttcctgctctactac 837
>gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, complete sequence Length = 270063 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctccttgaccttcctcttcctgct 25 |||||||| ||||||||||||||| Sbjct: 52454 ctccttgagcttcctcttcctgct 52431
>emb|AL358876.11| Human DNA sequence from clone RP11-431K24 on chromosome 1 Contains the 3' end of a novel gene (FLJ26758), a 52kDa eukaryotic translation initiation factor 2 subunit 3 gamma (EIF2S3) pseudogene and two novel genes, complete sequence Length = 171183 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ttcctgctccactacattct 37 |||||||||||||||||||| Sbjct: 57111 ttcctgctccactacattct 57130
>emb|AL356575.8| Human DNA sequence from clone RP11-340C20 on chromosome 13 Contains part of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, and a ribosomal protein L15 (RPL15) pseudogene, complete sequence Length = 158527 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tccttgaccttcctcttcct 22 |||||||||||||||||||| Sbjct: 38015 tccttgaccttcctcttcct 38034
>emb|AL353625.5| Human DNA sequence from clone RP11-288H12 on chromosome 6 Contains the 3' end of the IGF2R gene for insulin-like growth factor 2 receptor (cation-independent mannose-6 phosphate receptor, Insulin-like growth factor-2 receptor (mannose-6-phosphate receptor, cation-independent))(MPRI, CD222, CIMPR, M6P-R), the SLC22A1 gene for solute carrier family 22 (organic cation transporter), member 1 (OCT1), a calcium binding protein P22 (calcineurin B homolog, SLC9A1 binding protein, calcineurin homologous protein) (CHP) (SLC9A1BP) pseudogene and two CpG islands, complete sequence Length = 148250 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 121114 accttcctcttcctgctctactac 121137
>gb|AC009318.11| Homo sapiens 12p BAC RP11-996F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203417 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctccttgaccttcctcttc 20 |||||||||||||||||||| Sbjct: 174085 tctccttgaccttcctcttc 174104
>gb|AC116316.4| Homo sapiens BAC clone RP11-1258N14 from 4, complete sequence Length = 130364 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 gaccttcctcttcctgctcc 27 |||||||||||||||||||| Sbjct: 99560 gaccttcctcttcctgctcc 99579
>emb|X98332.1|HSOCTL H.sapiens mRNA for organic cation transporter, liver Length = 1888 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 886 accttcctcttcctgctctactac 909
>gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, complete sequence Length = 194702 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cttcctgctccactacattc 36 |||||||||||||||||||| Sbjct: 59378 cttcctgctccactacattc 59397
>gb|AF257498.2| Homo sapiens chromosome 4 clone SCb-207j3 map 4p, complete sequence Length = 120368 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cttcctgctccactacattc 36 |||||||||||||||||||| Sbjct: 32840 cttcctgctccactacattc 32859
>gb|AC020552.4|AC020552 Homo sapiens BAC clone RP11-431K24 from 1, complete sequence Length = 178820 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ttcctgctccactacattct 37 |||||||||||||||||||| Sbjct: 53254 ttcctgctccactacattct 53273
>gb|AC007750.3| Homo sapiens BAC clone RP11-576I16 from 2, complete sequence Length = 163681 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 tccttgaccttcctcttcct 22 |||||||||||||||||||| Sbjct: 115140 tccttgaccttcctcttcct 115159
>gb|AC004801.2| Homo sapiens 12 PAC RP1-228P16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 193775 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ttgaccttcctcttcctgct 25 |||||||||||||||||||| Sbjct: 183915 ttgaccttcctcttcctgct 183934
>ref|NM_003057.2| Homo sapiens solute carrier family 22 (organic cation transporter), member 1 (SLC22A1), transcript variant 1, mRNA Length = 1921 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 919 accttcctcttcctgctctactac 942
>ref|NM_153187.1| Homo sapiens solute carrier family 22 (organic cation transporter), member 1 (SLC22A1), transcript variant 2, mRNA Length = 1808 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 919 accttcctcttcctgctctactac 942
>emb|AJ276052.1|HSA276052 Homo sapiens partial oct1 gene for organic cation transporter, exon 4 Length = 2291 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 632 accttcctcttcctgctctactac 655
>gb|DQ227274.1| Canis familiaris CD97 large isoform mRNA, complete cds, alternatively spliced Length = 2632 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctccact 30 |||||||||||||||||||| Sbjct: 2345 cttcctcttcctgctccact 2364
>gb|AC005172.1|AC005172 Homo sapiens chromosome 4 clone B320H23 map 4q25, complete sequence Length = 74935 Score = 40.1 bits (20), Expect = 0.33 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cttcctgctccactacattc 36 |||||||||||||||||||| Sbjct: 13212 cttcctgctccactacattc 13193
>gb|U77086.1|HSU77086 Human organic cation transporter 1 (hOCT1) mRNA, complete cds Length = 1870 Score = 40.1 bits (20), Expect = 0.33 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 accttcctcttcctgctccactac 32 |||||||||||||||||| ||||| Sbjct: 867 accttcctcttcctgctctactac 890
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttgaccttcctcttcctg 23 ||||||||||||||||||| Sbjct: 64846 cttgaccttcctcttcctg 64864
>gb|AC148460.2| Xenopus tropicalis clone CH216-3L17, complete sequence Length = 194144 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tcctcttcctgctccacta 31 ||||||||||||||||||| Sbjct: 157725 tcctcttcctgctccacta 157707
>gb|AC123748.10| Mus musculus chromosome 5, clone RP24-176M16, complete sequence Length = 158365 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 ttcctgctccactacattc 36 ||||||||||||||||||| Sbjct: 12076 ttcctgctccactacattc 12094
>gb|AC110917.11| Mus musculus, clone RP23-155I20, complete sequence Length = 193005 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 ttcctgctccactacattc 36 ||||||||||||||||||| Sbjct: 168931 ttcctgctccactacattc 168949
>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete sequence Length = 159981 Score = 38.2 bits (19), Expect = 1.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 tctccttgaccttcctcttcctg 23 |||||||||| |||||||||||| Sbjct: 123626 tctccttgacattcctcttcctg 123648
>emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on chromosome 4, complete sequence Length = 192031 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 tgaccttcctcttcctgct 25 ||||||||||||||||||| Sbjct: 138571 tgaccttcctcttcctgct 138589
>emb|AL627073.15| Mouse DNA sequence from clone RP23-234E14 on chromosome 4, complete sequence Length = 137991 Score = 38.2 bits (19), Expect = 1.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 gaccttcctcttcctgctc 26 ||||||||||||||||||| Sbjct: 108688 gaccttcctcttcctgctc 108706
>gb|AC164620.5| Mus musculus BAC clone RP23-64H20 from chromosome 18, complete sequence Length = 182838 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 54784 ccttcctcttcctgctcc 54767
>gb|AC162525.4| Mus musculus BAC clone RP23-188O11 from chromosome 17, complete sequence Length = 196013 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 21 ctgctccactacattctgggca 42 ||||||||||||||| |||||| Sbjct: 87322 ctgctccactacattttgggca 87301
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 tgaccttcctcttcctgc 24 |||||||||||||||||| Sbjct: 1719241 tgaccttcctcttcctgc 1719224
>gb|AC167723.3| Mus musculus BAC RP23-297A10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196622 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 163633 ccttcctcttcctgctcc 163616
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 10020 ccttcctcttcctgctcc 10003
>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete sequence Length = 163417 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 tctccttgaccttcctct 18 |||||||||||||||||| Sbjct: 33163 tctccttgaccttcctct 33146
>ref|XM_753688.1| Ustilago maydis 521 hypothetical protein (UM02634.1) partial mRNA Length = 5289 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 13 tcctcttcctgctccactacat 34 |||| ||||||||||||||||| Sbjct: 2468 tcctgttcctgctccactacat 2489
>emb|CT025605.11| Mouse DNA sequence from clone RP23-259D11 on chromosome 13, complete sequence Length = 188616 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 cttgaccttcctcttcct 22 |||||||||||||||||| Sbjct: 84549 cttgaccttcctcttcct 84566
>ref|XM_381574.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG01398.1) partial mRNA Length = 420 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 cttgaccttcctcttcct 22 |||||||||||||||||| Sbjct: 180 cttgaccttcctcttcct 197
>gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome 7, complete sequence Length = 150343 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 cctcttcctgctccacta 31 |||||||||||||||||| Sbjct: 39300 cctcttcctgctccacta 39283
>ref|XM_807818.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510531.30) partial mRNA Length = 3141 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cttcctcttcctgctcca 28 |||||||||||||||||| Sbjct: 2248 cttcctcttcctgctcca 2231
>ref|XM_814281.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511817.310) partial mRNA Length = 3135 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cttcctcttcctgctcca 28 |||||||||||||||||| Sbjct: 2242 cttcctcttcctgctcca 2225
>gb|AC124774.4| Mus musculus BAC clone RP23-49E5 from 15, complete sequence Length = 227514 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 ccttgaccttcctcttcc 21 |||||||||||||||||| Sbjct: 204739 ccttgaccttcctcttcc 204722
>gb|AC116584.2| Mus musculus BAC clone RP23-353J13 from 15, complete sequence Length = 220203 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 ccttgaccttcctcttcc 21 |||||||||||||||||| Sbjct: 118178 ccttgaccttcctcttcc 118195
>emb|CR720540.2|CNS0GIWY Tetraodon nigroviridis full-length cDNA Length = 593 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 550 ccttcctcttcctgctcc 567
>emb|CR716729.2|CNS0GFZ6 Tetraodon nigroviridis full-length cDNA Length = 609 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 566 ccttcctcttcctgctcc 583
>emb|CR716532.2|CNS0GFTP Tetraodon nigroviridis full-length cDNA Length = 608 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 565 ccttcctcttcctgctcc 582
>emb|CR716058.2|CNS0GFGM Tetraodon nigroviridis full-length cDNA Length = 620 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 577 ccttcctcttcctgctcc 594
>emb|CR714217.2|CNS0GE1H Tetraodon nigroviridis full-length cDNA Length = 608 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 565 ccttcctcttcctgctcc 582
>emb|CR711164.2|CNS0GBOO Tetraodon nigroviridis full-length cDNA Length = 608 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 565 ccttcctcttcctgctcc 582
>emb|CR710510.2|CNS0GB6I Tetraodon nigroviridis full-length cDNA Length = 670 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 627 ccttcctcttcctgctcc 644
>emb|CR708320.2|CNS0G9HO Tetraodon nigroviridis full-length cDNA Length = 603 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 560 ccttcctcttcctgctcc 577
>emb|CR706931.2|CNS0G8F3 Tetraodon nigroviridis full-length cDNA Length = 588 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 545 ccttcctcttcctgctcc 562
>gb|AC004453.1| Homo sapiens PAC clone RP5-844F9 from 7, complete sequence Length = 146500 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tctccttgaccttcctct 18 |||||||||||||||||| Sbjct: 111574 tctccttgaccttcctct 111591
>emb|CR702693.2|CNS0G55D Tetraodon nigroviridis full-length cDNA Length = 542 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 499 ccttcctcttcctgctcc 516
>emb|CR691179.2|CNS0FW9J Tetraodon nigroviridis full-length cDNA Length = 602 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 565 ccttcctcttcctgctcc 582
>emb|CR697064.2|CNS0G0T0 Tetraodon nigroviridis full-length cDNA Length = 595 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 552 ccttcctcttcctgctcc 569
>emb|CR687396.2|CNS0FTCG Tetraodon nigroviridis full-length cDNA Length = 611 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 568 ccttcctcttcctgctcc 585
>emb|CR679934.2|CNS0FNL6 Tetraodon nigroviridis full-length cDNA Length = 594 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 551 ccttcctcttcctgctcc 568
>emb|CR671147.2|CNS0FGTT Tetraodon nigroviridis full-length cDNA Length = 591 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 548 ccttcctcttcctgctcc 565
>emb|CR669695.2|CNS0FFPH Tetraodon nigroviridis full-length cDNA Length = 596 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 553 ccttcctcttcctgctcc 570
>emb|CR666460.2|CNS0FD7M Tetraodon nigroviridis full-length cDNA Length = 560 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 517 ccttcctcttcctgctcc 534
>emb|CR665549.2|CNS0FCIB Tetraodon nigroviridis full-length cDNA Length = 591 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 548 ccttcctcttcctgctcc 565
>emb|CR665413.2|CNS0FCEJ Tetraodon nigroviridis full-length cDNA Length = 608 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 565 ccttcctcttcctgctcc 582
>emb|CR664521.2|CNS0FBPR Tetraodon nigroviridis full-length cDNA Length = 592 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 549 ccttcctcttcctgctcc 566
>emb|CR658532.2|CNS0F73E Tetraodon nigroviridis full-length cDNA Length = 593 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 550 ccttcctcttcctgctcc 567
>emb|CR657280.2|CNS0F64M Tetraodon nigroviridis full-length cDNA Length = 588 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 545 ccttcctcttcctgctcc 562
>gb|AC155929.6| Mus musculus BAC clone RP24-75H6 from chromosome 10, complete sequence Length = 191193 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 ttcctcttcctgctccac 29 |||||||||||||||||| Sbjct: 52503 ttcctcttcctgctccac 52520
>emb|CR635217.2|CNS0EP3R Tetraodon nigroviridis full-length cDNA Length = 819 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 776 ccttcctcttcctgctcc 793
>gb|AC161585.2| Mus musculus BAC clone RP24-506J9 from chromosome 13, complete sequence Length = 211181 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 cttgaccttcctcttcct 22 |||||||||||||||||| Sbjct: 40656 cttgaccttcctcttcct 40673
>gb|AC110980.6| Rattus norvegicus 4 BAC CH230-94D15 (Children's Hospital Oakland Research Institute) complete sequence Length = 87812 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 accttcctcttcctgctc 26 |||||||||||||||||| Sbjct: 75907 accttcctcttcctgctc 75924
>emb|AL590365.14| Human DNA sequence from clone RP11-455B2 on chromosome 10 Contains the gene for a novel thioesterase domain containing protein (FLJ11106), the gene for ribonuclease P (38kD) (RPP38), the gene for a novel protein (FLJ38219), the gene for a novel protein, the NMT2 gene for N-myristoyltransferase 2, the 3' end of the gene for a novel protein (LOC221061), a novel gene, a pseudogene similar to part of glyceraldehyde-3-phosphate dehydrogenase (GAPD)(G3PD,GAPDH), a peptidylprolyl isomerase A (cyclophilin A) (PPIA)(CYPA,CYPH) pseudogene, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa (NDUFA4)(MLRQ) pseudogene and three CpG islands, complete sequence Length = 194802 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 9 accttcctcttcctgctc 26 |||||||||||||||||| Sbjct: 41353 accttcctcttcctgctc 41336
>emb|AL512638.5| Human DNA sequence from clone RP4-663N10 on chromosome 1 Contains the 5' end of the NGFB gene for nerve growth factor (beta polypeptide), the 3' end of a novel gene, a renin (REN) pseudogene and one CpG island, complete sequence Length = 177066 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctcca 28 |||||||||||||||||| Sbjct: 146632 cttcctcttcctgctcca 146649
>gb|AC158926.4| Mus musculus chromosome 3, clone RP24-93J4, complete sequence Length = 185247 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 5114 ccttcctcttcctgctcc 5097
>gb|AC161001.4| Mus musculus BAC clone RP23-30A18 from chromosome 14, complete sequence Length = 215474 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 85541 ccttcctcttcctgctcc 85558
>gb|AC124904.3| Equus caballus clone CH241-137P22, complete sequence Length = 95553 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tctccttgaccttcctct 18 |||||||||||||||||| Sbjct: 77056 tctccttgaccttcctct 77073
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence Length = 202157 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tctccttgaccttcctct 18 |||||||||||||||||| Sbjct: 21828 tctccttgaccttcctct 21845
>emb|BX323574.12| Zebrafish DNA sequence from clone DKEY-180F8, complete sequence Length = 171724 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 18 ttcctgctccactacattctgg 39 ||||| |||||||||||||||| Sbjct: 145079 ttcctactccactacattctgg 145058
>gb|AC010408.6| Homo sapiens chromosome 5 clone CTD-2156G10, complete sequence Length = 71806 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 9720 ccttcctcttcctgctcc 9737
>gb|AC010210.24| Homo sapiens 3 BAC RP11-933H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152823 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 cttcctcttcctgctcca 28 |||||||||||||||||| Sbjct: 75236 cttcctcttcctgctcca 75253
>gb|AC110761.3| Homo sapiens BAC clone RP11-45C13 from 4, complete sequence Length = 153458 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 ccttgaccttcctcttcc 21 |||||||||||||||||| Sbjct: 106579 ccttgaccttcctcttcc 106562
>gb|AC084217.7| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-327P24, complete sequence Length = 216988 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 tgaccttcctcttcctgctcca 28 |||||||||||||||| ||||| Sbjct: 78514 tgaccttcctcttcctcctcca 78535
>gb|AC055723.22| Homo sapiens 3 BAC RP11-201E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166787 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 accttcctcttcctgctc 26 |||||||||||||||||| Sbjct: 113453 accttcctcttcctgctc 113470
>ref|XM_690517.1| PREDICTED: Danio rerio similar to EGF-like-domain, multiple 3 (LOC567225), mRNA Length = 2592 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 tcctcttcctgctccact 30 |||||||||||||||||| Sbjct: 1439 tcctcttcctgctccact 1422
>gb|AC175203.2| Sporobolomyces roseus clone JGIBAIF-5E21, complete sequence Length = 35046 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 tctccttgaccttcctcttcct 22 ||||||||||| |||||||||| Sbjct: 34192 tctccttgaccgtcctcttcct 34213
>ref|XM_691339.1| PREDICTED: Danio rerio similar to ryanodine receptor 1, skeletal muscle (LOC568030), mRNA Length = 1953 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 cttcctcttcctgctcca 28 |||||||||||||||||| Sbjct: 1747 cttcctcttcctgctcca 1730
>gb|AC136191.5| Rattus norvegicus BAC CH230-52I17 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 221923 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 1459 ccttcctcttcctgctcc 1476
>gb|AC101979.13| Mus musculus chromosome 3, clone RP24-338A7, complete sequence Length = 161025 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 50772 ccttcctcttcctgctcc 50755
>gb|AC153141.7| Mus musculus BAC clone RP23-268A17 from chromosome 10, complete sequence Length = 221824 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 ttcctcttcctgctccac 29 |||||||||||||||||| Sbjct: 184301 ttcctcttcctgctccac 184318
>gb|AC008645.5| Homo sapiens chromosome 5 clone CTB-181L5, complete sequence Length = 104390 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ttcctcttcctgctccac 29 |||||||||||||||||| Sbjct: 59705 ttcctcttcctgctccac 59688
>gb|AC016598.5|AC016598 Homo sapiens chromosome 5 clone CTD-2050E21, complete sequence Length = 159866 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 ttcctcttcctgctccac 29 |||||||||||||||||| Sbjct: 61710 ttcctcttcctgctccac 61727
>ref|XM_233620.3| PREDICTED: Rattus norvegicus similar to PR-domain zinc finger protein 2 (Retinoblastoma protein-interacting zinc-finger protein) (Zinc finger protein RIZ) (LOC313678), mRNA Length = 5211 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 3227 ccttcctcttcctgctcc 3244
>gb|U89945.1|OTU89945 Oncorhynchus tshawytscha heat shock protein hsp90 mRNA, complete cds Length = 2633 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 tctccttgaccttcctcttcct 22 |||||||||||||| ||||||| Sbjct: 987 tctccttgaccttcttcttcct 966
>gb|AC133936.5| Mus musculus BAC clone RP24-399H1 from chromosome 6, complete sequence Length = 177971 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 gaccttcctcttcctgct 25 |||||||||||||||||| Sbjct: 67905 gaccttcctcttcctgct 67922
>gb|AC140466.3| Mus musculus BAC clone RP24-392F9 from 6, complete sequence Length = 148392 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 69003 ccttcctcttcctgctcc 68986
>gb|AC140217.3| Mus musculus BAC clone RP23-279O5 from 8, complete sequence Length = 224205 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 105044 ccttcctcttcctgctcc 105027
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence Length = 225816 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 160610 ccttcctcttcctgctcc 160627
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 tctccttgaccttcctct 18 |||||||||||||||||| Sbjct: 530022 tctccttgaccttcctct 530039
>gb|U17837.1|RRU17837 Rattus sp. zinc finger protein RIZ mRNA, complete cds Length = 6152 Score = 36.2 bits (18), Expect = 5.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 ccttcctcttcctgctcc 27 |||||||||||||||||| Sbjct: 3316 ccttcctcttcctgctcc 3333
>dbj|AB021490.2| Oryzias latipes gene for membrane guanylyl cyclase OlGC1, complete cds Length = 96891 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 17 cttcctgctccactacattctg 38 |||||||||||||| ||||||| Sbjct: 87890 cttcctgctccactccattctg 87911
>emb|AL355177.14| Mouse DNA sequence from clone RP21-61H21 on chromosome 5, complete sequence Length = 134781 Score = 36.2 bits (18), Expect = 5.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 tgaccttcctcttcctgctcca 28 |||||||||||||||| ||||| Sbjct: 56362 tgaccttcctcttcctcctcca 56341 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 542,993 Number of Sequences: 3902068 Number of extensions: 542993 Number of successful extensions: 193642 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 193307 Number of HSP's gapped (non-prelim): 335 length of query: 43 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 23 effective length of database: 17,155,003,908 effective search space: 394565089884 effective search space used: 394565089884 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)