ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart15f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete... 44 0.034
2emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chro... 40 0.52
3emb|AL136451.17| Human DNA sequence from clone RP11-162M1 on chr... 40 0.52
4gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368... 40 0.52
5ref|XM_420467.1| PREDICTED: Gallus gallus similar to Jade1 prote... 38 2.1
6gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Ho... 38 2.1
7ref|NM_014631.2| Homo sapiens SH3 and PX domains 2A (SH3PXD2A), ... 38 2.1
8emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 ... 38 2.1
9emb|AL121929.17|HSBA416N2 Human DNA sequence from clone RP11-416... 38 2.1
10emb|Y12734.1|PPFERREDO P.patens mRNA for ferredoxin 38 2.1
11dbj|AK123570.1| Homo sapiens cDNA FLJ41576 fis, clone CTONG2019248 38 2.1
12gb|AC154633.2| Mus musculus BAC clone RP23-296I10 from chromosom... 38 2.1
13emb|BX647371.1|HSM807516 Homo sapiens mRNA; cDNA DKFZp686B16111 ... 38 2.1
14emb|AL833070.2|HSM804381 Homo sapiens mRNA; cDNA DKFZp451A0419 (... 38 2.1
15gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, com... 36 8.2
16gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, c... 36 8.2
17gb|AC161501.4| Mus musculus chromosome 3, clone RP24-150C17, com... 36 8.2
18gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genom... 36 8.2
19gb|AC118069.8| Rattus norvegicus 9 BAC CH230-343O14 (Children's ... 36 8.2
20gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's ... 36 8.2
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 36 8.2
22gb|AC139242.2| Mus musculus BAC clone RP23-435I6 from chromosome... 36 8.2
23gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, c... 36 8.2
24gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosom... 36 8.2
25gb|AC002394.1|HUAC002394 Human Chromosome 16 BAC clone CIT987SK-... 36 8.2
26gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete... 36 8.2
27gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, com... 36 8.2
28gb|AC153623.8| Mus musculus 6 BAC RP23-459F14 (Roswell Park Canc... 36 8.2
29gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 ma... 36 8.2
30emb|AL589880.8| Human DNA sequence from clone RP11-111F16 on chr... 36 8.2
31emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022... 36 8.2
32emb|CR354378.21| Zebrafish DNA sequence from clone CH211-131D10 ... 36 8.2
33emb|AL691510.11| Mouse DNA sequence from clone RP23-125C16 on ch... 36 8.2
34gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell ... 36 8.2
35gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell ... 36 8.2
36gb|AC010007.4| Drosophila melanogaster 3L BAC RP98-17K17 (Roswel... 36 8.2
37gb|AC010564.7| Drosophila melanogaster 3L BAC RP98-27O1 (Roswell... 36 8.2
38emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0... 36 8.2
39gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 ma... 36 8.2
40gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 ma... 36 8.2
41gb|AC079168.22| Homo sapiens Xp BAC RP11-753E22 (Roswell Park Ca... 36 8.2
42gb|AC105410.1| Homo sapiens chromosome 16 clone CTD-2348G11, com... 36 8.2
43gb|AC012652.7| Homo sapiens chromosome 15 clone RP11-46M12 map 1... 36 8.2
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.2
45emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in ... 36 8.2
46emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chr... 36 8.2
47emb|CR339057.6| Zebrafish DNA sequence from clone DKEY-264L20 in... 36 8.2
48emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in... 36 8.2
49gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 ... 36 8.2
50gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 36 8.2
51gb|AC152961.2| Mus musculus 6 BAC RP23-4H14 (Roswell Park Cancer... 36 8.2
52gb|AC152069.4| Mus musculus chromosome 3, clone RP24-403D5, comp... 36 8.2
53gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s... 36 8.2
54gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromos... 36 8.2
55emb|CT030695.5| Mouse DNA sequence from clone RP23-259F10 on chr... 36 8.2
56gb|AC132453.3| Mus musculus BAC clone RP23-200J18 from 6, comple... 36 8.2
57emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 36 8.2
58emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chr... 36 8.2
59emb|AL671215.4| Mouse DNA sequence from clone RP23-277C18 on chr... 36 8.2
60emb|AL833792.10| Mouse DNA sequence from clone RP23-97B23 on chr... 36 8.2 
>gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete sequence
          Length = 111147

 Score = 44.1 bits (22), Expect = 0.034
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 25    ctcccccttctttggattctcc 46
             ||||||||||||||||||||||
Sbjct: 86791 ctcccccttctttggattctcc 86770
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>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete
             sequence
          Length = 189385

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aattcctctcccccttcttt 37
             ||||||||||||||||||||
Sbjct: 22490 aattcctctcccccttcttt 22471
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>emb|AL136451.17| Human DNA sequence from clone RP11-162M1 on chromosome 10, complete
             sequence
          Length = 124392

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gccaattcctctcccccttc 34
             ||||||||||||||||||||
Sbjct: 45205 gccaattcctctcccccttc 45224
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>gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368K8 containing KIAA0998 gene,
              partial cds, complete sequence
          Length = 185964

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     aattcctctcccccttcttt 37
              ||||||||||||||||||||
Sbjct: 108332 aattcctctcccccttcttt 108313
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>ref|XM_420467.1| PREDICTED: Gallus gallus similar to Jade1 protein long isoform; gene
            for apoptosis and differentiation in epithelia
            (LOC422502), mRNA
          Length = 4996

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 22   cctctcccccttctttgga 40
            |||||||||||||||||||
Sbjct: 4329 cctctcccccttctttgga 4311
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>gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 150308

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     attcctctcccccttcttt 37
              |||||||||||||||||||
Sbjct: 110184 attcctctcccccttcttt 110166
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>ref|NM_014631.2| Homo sapiens SH3 and PX domains 2A (SH3PXD2A), mRNA
          Length = 11264

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 21   tcctctcccccttctttgg 39
            |||||||||||||||||||
Sbjct: 7673 tcctctcccccttctttgg 7691
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>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3,
             complete sequence
          Length = 145085

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    cttctttggattctcctcc 49
             |||||||||||||||||||
Sbjct: 27504 cttctttggattctcctcc 27522
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>emb|AL121929.17|HSBA416N2 Human DNA sequence from clone RP11-416N2 on chromosome 10 Contains the
             3' end of the NEURL gene for neuralized-like (Drosophila),
             the 3' end of the SH3MD1 gene for SH3 multiple domains 1
             and seven CpG islands, complete sequence
          Length = 203262

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    tcctctcccccttctttgg 39
             |||||||||||||||||||
Sbjct: 71336 tcctctcccccttctttgg 71318
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>emb|Y12734.1|PPFERREDO P.patens mRNA for ferredoxin
          Length = 888

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 16  ccaattcctctcccccttctttg 38
           |||||||| ||||||||||||||
Sbjct: 82  ccaattcccctcccccttctttg 104
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>dbj|AK123570.1| Homo sapiens cDNA FLJ41576 fis, clone CTONG2019248
          Length = 4018

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  tcctctcccccttctttgg 39
           |||||||||||||||||||
Sbjct: 429 tcctctcccccttctttgg 447
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>gb|AC154633.2| Mus musculus BAC clone RP23-296I10 from chromosome 12, complete
             sequence
          Length = 216169

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    attcctctcccccttcttt 37
             |||||||||||||||||||
Sbjct: 64789 attcctctcccccttcttt 64771
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>emb|BX647371.1|HSM807516 Homo sapiens mRNA; cDNA DKFZp686B16111 (from clone DKFZp686B16111)
          Length = 5420

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 21   tcctctcccccttctttgg 39
            |||||||||||||||||||
Sbjct: 1827 tcctctcccccttctttgg 1845
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>emb|AL833070.2|HSM804381 Homo sapiens mRNA; cDNA DKFZp451A0419 (from clone DKFZp451A0419);
            complete cds
          Length = 4805

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 21   tcctctcccccttctttgg 39
            |||||||||||||||||||
Sbjct: 1214 tcctctcccccttctttgg 1232
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>gb|AC121281.19| Mus musculus chromosome 3, clone RP23-61G16, complete sequence
          Length = 196761

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     tcctctcccccttctttg 38
              ||||||||||||||||||
Sbjct: 115224 tcctctcccccttctttg 115241
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>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence
          Length = 193998

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 20     ttcctctcccccttcttt 37
              ||||||||||||||||||
Sbjct: 148488 ttcctctcccccttcttt 148471
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>gb|AC161501.4| Mus musculus chromosome 3, clone RP24-150C17, complete sequence
          Length = 155378

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 23019 ttcctctcccccttcttt 23036



 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 22960 ttcctctcccccttcttt 22977
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>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete
             sequence
          Length = 141691

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 27615 ttcctctcccccttcttt 27632
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>gb|AC118069.8| Rattus norvegicus 9 BAC CH230-343O14 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 179244

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    attcctctcccccttctt 36
             ||||||||||||||||||
Sbjct: 70873 attcctctcccccttctt 70856
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>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 262323

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     ttctttggattctcctcc 49
              ||||||||||||||||||
Sbjct: 198723 ttctttggattctcctcc 198706
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 20       ttcctctcccccttcttt 37
                ||||||||||||||||||
Sbjct: 24651429 ttcctctcccccttcttt 24651446
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>gb|AC139242.2| Mus musculus BAC clone RP23-435I6 from chromosome 13, complete sequence
          Length = 189431

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 30     ccttctttggattctcct 47
              ||||||||||||||||||
Sbjct: 176549 ccttctttggattctcct 176532
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>gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, complete sequence
          Length = 221034

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 30    ccttctttggattctcct 47
             ||||||||||||||||||
Sbjct: 96945 ccttctttggattctcct 96928
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>gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosome 1, complete sequence
          Length = 197488

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    aattcctctcccccttct 35
             ||||||||||||||||||
Sbjct: 23476 aattcctctcccccttct 23459
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>gb|AC002394.1|HUAC002394 Human Chromosome 16 BAC clone CIT987SK-A-211C6, complete sequence
          Length = 107910

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 28    ccccttctttggattctc 45
             ||||||||||||||||||
Sbjct: 68889 ccccttctttggattctc 68906
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>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence
          Length = 226443

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    aattcctctcccccttct 35
             ||||||||||||||||||
Sbjct: 51910 aattcctctcccccttct 51927
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>gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, complete sequence
          Length = 196932

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 20   ttcctctcccccttcttt 37
            ||||||||||||||||||
Sbjct: 5086 ttcctctcccccttcttt 5069
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>gb|AC153623.8| Mus musculus 6 BAC RP23-459F14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205825

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 20     ttcctctcccccttcttt 37
              ||||||||||||||||||
Sbjct: 187935 ttcctctcccccttcttt 187918
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>gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 map 1, complete sequence
          Length = 191415

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 83564 ttcctctcccccttcttt 83547
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>emb|AL589880.8| Human DNA sequence from clone RP11-111F16 on chromosome X Contains a
             eukaryotic translation initiation factor 4B (EIF4B)
             pseudogene and a novel pseudogene (PRO1843), complete
             sequence
          Length = 71509

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 19304 ttcctctcccccttcttt 19287
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>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the
              3' end of the OPRL1 gene for opiate receptor-like 1
              protein, the GPR8 gene encoding a G protein-coupled
              receptor, the KIAA0835 gene encoding a protein similar to
              the myelin transcription factor 1 (MYT1), a novel gene, 7
              CpG islands, ESTs, STSs and GSSs, complete sequence
          Length = 179888

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 38     ggattctcctccgtcttt 55
              ||||||||||||||||||
Sbjct: 106139 ggattctcctccgtcttt 106122
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>emb|CR354378.21| Zebrafish DNA sequence from clone CH211-131D10 in linkage group 7,
             complete sequence
          Length = 162741

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 32    ttctttggattctcctcc 49
             ||||||||||||||||||
Sbjct: 52895 ttctttggattctcctcc 52878
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>emb|AL691510.11| Mouse DNA sequence from clone RP23-125C16 on chromosome 11 Contains a
             ribosomal protein S6 (Rps6) pseudogene, complete sequence
          Length = 116174

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 34    ctttggattctcctccgtcttt 55
             |||||||||||||||| |||||
Sbjct: 88010 ctttggattctcctccatcttt 88031
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>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 182635

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 26    tcccccttctttggattctcct 47
             ||||| ||||||||||||||||
Sbjct: 92370 tccccgttctttggattctcct 92391
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>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187230

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 26    tcccccttctttggattctcct 47
             ||||| ||||||||||||||||
Sbjct: 27666 tccccgttctttggattctcct 27645
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>gb|AC010007.4| Drosophila melanogaster 3L BAC RP98-17K17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 175481

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 36     ttggattctcctccgtct 53
              ||||||||||||||||||
Sbjct: 158889 ttggattctcctccgtct 158906
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>gb|AC010564.7| Drosophila melanogaster 3L BAC RP98-27O1 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 196594

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 36    ttggattctcctccgtct 53
             ||||||||||||||||||
Sbjct: 22595 ttggattctcctccgtct 22612
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>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from
             chromosome 3 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136470

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 83475 ttcctctcccccttcttt 83492
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>gb|AC006526.8| Arabidopsis thaliana chromosome 2 clone F11C10 map CIC02E07, complete
             sequence
          Length = 95214

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 31    cttctttggattctcctc 48
             ||||||||||||||||||
Sbjct: 62699 cttctttggattctcctc 62716
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>gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 map CIC06C03, complete
            sequence
          Length = 84825

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 31   cttctttggattctcctc 48
            ||||||||||||||||||
Sbjct: 3637 cttctttggattctcctc 3654
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>gb|AC079168.22| Homo sapiens Xp BAC RP11-753E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151012

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     ttctttggattctcctcc 49
              ||||||||||||||||||
Sbjct: 110526 ttctttggattctcctcc 110509
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>gb|AC105410.1| Homo sapiens chromosome 16 clone CTD-2348G11, complete sequence
          Length = 133838

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 28    ccccttctttggattctc 45
             ||||||||||||||||||
Sbjct: 17715 ccccttctttggattctc 17732
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>gb|AC012652.7| Homo sapiens chromosome 15 clone RP11-46M12 map 15q15, complete
             sequence
          Length = 169825

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 1     ccatcagtcctcccgcca 18
             ||||||||||||||||||
Sbjct: 87220 ccatcagtcctcccgcca 87237
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 20       ttcctctcccccttcttt 37
                ||||||||||||||||||
Sbjct: 24568898 ttcctctcccccttcttt 24568915
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>emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in linkage group 7, complete
              sequence
          Length = 223845

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 32     ttctttggattctcctcc 49
              ||||||||||||||||||
Sbjct: 159446 ttctttggattctcctcc 159429
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>emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chromosome X, complete
             sequence
          Length = 77486

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    tcctctcccccttctttg 38
             ||||||||||||||||||
Sbjct: 72586 tcctctcccccttctttg 72603
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>emb|CR339057.6| Zebrafish DNA sequence from clone DKEY-264L20 in linkage group 7,
             complete sequence
          Length = 109226

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 40    attctcctccgtcttttc 57
             ||||||||||||||||||
Sbjct: 81096 attctcctccgtcttttc 81113
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>emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in linkage group 14,
             complete sequence
          Length = 144393

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 32    ttctttggattctcctcc 49
             ||||||||||||||||||
Sbjct: 80884 ttctttggattctcctcc 80867
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>gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 of 83 of the complete
              sequence
          Length = 302131

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 36     ttggattctcctccgtct 53
              ||||||||||||||||||
Sbjct: 145631 ttggattctcctccgtct 145648
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
             sequence
          Length = 290970

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 26    tcccccttctttggattctcct 47
             ||||| ||||||||||||||||
Sbjct: 81311 tccccgttctttggattctcct 81332
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>gb|AC152961.2| Mus musculus 6 BAC RP23-4H14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227467

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    caattcctctcccccttc 34
             ||||||||||||||||||
Sbjct: 41408 caattcctctcccccttc 41425
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>gb|AC152069.4| Mus musculus chromosome 3, clone RP24-403D5, complete sequence
          Length = 185511

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 20     ttcctctcccccttcttt 37
              ||||||||||||||||||
Sbjct: 121673 ttcctctcccccttcttt 121690



 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 20     ttcctctcccccttcttt 37
              ||||||||||||||||||
Sbjct: 121614 ttcctctcccccttcttt 121631
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>gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s DS03179 (D226), DS06357
             (D230), DS03404 (D231), DS06962 (D232), and DS07291
             (D240)), complete sequence
          Length = 268369

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 36    ttggattctcctccgtct 53
             ||||||||||||||||||
Sbjct: 66777 ttggattctcctccgtct 66760
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>gb|AC171274.2| Gallus gallus BAC clone CH261-121C13 from chromosome ul, complete
             sequence
          Length = 218983

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    caattcctctcccccttc 34
             ||||||||||||||||||
Sbjct: 86620 caattcctctcccccttc 86637
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>emb|CT030695.5| Mouse DNA sequence from clone RP23-259F10 on chromosome 9, complete
             sequence
          Length = 173589

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    ttctttggattctcctcc 49
             ||||||||||||||||||
Sbjct: 94331 ttctttggattctcctcc 94348
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>gb|AC132453.3| Mus musculus BAC clone RP23-200J18 from 6, complete sequence
          Length = 206248

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 17    caattcctctcccccttc 34
             ||||||||||||||||||
Sbjct: 13532 caattcctctcccccttc 13515
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 33     tctttggattctcctccgtctt 54
              |||| |||||||||||||||||
Sbjct: 527409 tcttgggattctcctccgtctt 527388
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>emb|AL844893.9| Mouse DNA sequence from clone RP23-355H24 on chromosome 2, complete
              sequence
          Length = 175570

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 19     attcctctcccccttctt 36
              ||||||||||||||||||
Sbjct: 155996 attcctctcccccttctt 156013
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>emb|AL671215.4| Mouse DNA sequence from clone RP23-277C18 on chromosome X, complete
              sequence
          Length = 182633

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 16     ccaattcctctccccctt 33
              ||||||||||||||||||
Sbjct: 147198 ccaattcctctccccctt 147181
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>emb|AL833792.10| Mouse DNA sequence from clone RP23-97B23 on chromosome X, complete
             sequence
          Length = 225818

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 20    ttcctctcccccttcttt 37
             ||||||||||||||||||
Sbjct: 12490 ttcctctcccccttcttt 12507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 489,229
Number of Sequences: 3902068
Number of extensions: 489229
Number of successful extensions: 46497
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46374
Number of HSP's gapped (non-prelim): 123
length of query: 58
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 37
effective length of database: 17,151,101,840
effective search space: 634590768080
effective search space used: 634590768080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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