ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart15f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4,... 515 e-143
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 515 e-143
3dbj|AK067501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 515 e-143
4emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 515 e-143
5emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4,... 515 e-143
6ref|XM_474080.1| Oryza sativa (japonica cultivar-group), predic... 513 e-142
7dbj|AK106989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 507 e-140
8gb|AY104098.1| Zea mays PCO119647 mRNA sequence 387 e-104
9gb|AY105877.1| Zea mays PCO119646 mRNA sequence 174 2e-40
10gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 48 0.032
11ref|XM_781278.1| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.032
12gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 48 0.032
13emb|Z27080.1|CEF55H2 Caenorhabditis elegans Cosmid F55H2, comple... 46 0.13
14ref|NM_066693.2| Caenorhabditis elegans Vacuolar H ATPase family... 46 0.13
15dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 46 0.13
16emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 46 0.13
17gb|AE017221.1| Thermus thermophilus HB27, complete genome 46 0.13
18ref|XM_476599.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.50
19ref|XM_471734.1| Oryza sativa (japonica cultivar-group), predic... 44 0.50
20emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.50
21emb|BX640436.1| Bordetella parapertussis strain 12822, complete ... 44 0.50
22emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 44 0.50
23emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4,... 44 0.50
24emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4,... 44 0.50
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
27dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
28dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
29dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.50
30dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
31dbj|AK070019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
32dbj|AK065452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.50
33dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.50
34dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for ... 44 0.50
35ref|NM_192555.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
36ref|XM_515296.1| PREDICTED: Pan troglodytes TGFB inducible early... 42 2.0
37gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 2.0
38emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 2.0
39emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 42 2.0
40emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 42 2.0
41emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 42 2.0
42emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 42 2.0
43gb|AC073344.7| Homo sapiens BAC clone RP11-628B17 from 4, comple... 42 2.0
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
45gb|AC093592.3| Homo sapiens BAC clone RP11-50L21 from 4, complet... 42 2.0
46gb|AF178441.1|AF178441 Sinorhizobium meliloti nutrient deprivati... 42 2.0
47dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
48gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.0
49dbj|AK107346.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
50gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.0
51gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.8
52ref|NM_186999.2| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
53gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.8
54gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosom... 40 7.8
55gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, com... 40 7.8
56ref|XM_752079.1| Ustilago maydis 521 hypothetical protein (UM010... 40 7.8
57gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 7.8
58gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 7.8
59emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
60emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
61dbj|AK140355.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 7.8
62gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 7.8
63gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.8
64emb|AJ586111.1| Natrinema sp. XA3-1 16S rRNA gene, 23S rRNA gene... 40 7.8
65gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 7.8
66gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.8
67gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.8
68dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.8
69dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 7.8
70dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
71dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
72dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
73dbj|AK111482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
74dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
75emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.8
76emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 7.8
77gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, comple... 40 7.8 
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
              complete sequence
          Length = 150416

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                          
Query: 88     gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 147
              ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 126205 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 126264

                                                                          
Query: 148    gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 207
              |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 126265 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 126324

                                                                          
Query: 208    gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 267
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 126325 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 126384

                                                                          
Query: 268    cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 327
               ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 126385 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 126444

                                                                          
Query: 328    cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 387
              ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 126445 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 126504

                                                                      
Query: 388    ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
              ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 126505 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 126560



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                          
Query: 452    tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
              ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 126587 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 126646

                                                                          
Query: 512    cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
              |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 126647 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 126706

                   
Query: 572    ctcga 576
              |||||
Sbjct: 126707 ctcga 126711
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                            
Query: 88       gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 147
                ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 32766772 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 32766831

                                                                            
Query: 148      gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 207
                |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 32766832 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 32766891

                                                                            
Query: 208      gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 267
                ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 32766892 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 32766951

                                                                            
Query: 268      cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 327
                 ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 32766952 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 32767011

                                                                            
Query: 328      cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 387
                ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 32767012 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 32767071

                                                                        
Query: 388      ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
                ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 32767072 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 32767127



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                            
Query: 452      tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
                ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 32767154 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 32767213

                                                                            
Query: 512      cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
                |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 32767214 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 32767273

                     
Query: 572      ctcga 576
                |||||
Sbjct: 32767274 ctcga 32767278



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 499      ctgccgcgccgcccacgtcaaggcca 524
                ||||||||||||| ||||||||||||
Sbjct: 13887480 ctgccgcgccgccaacgtcaaggcca 13887505



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 493      ctccgcctgccgcgccgccc 512
                ||||||||||||||||||||
Sbjct: 20390558 ctccgcctgccgcgccgccc 20390539
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>dbj|AK067501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110H12, full
           insert sequence
          Length = 1438

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                       
Query: 88  gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 147
           ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 226 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 285

                                                                       
Query: 148 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 207
           |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 286 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 345

                                                                       
Query: 208 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 267
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 346 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 405

                                                                       
Query: 268 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 327
            ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 406 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 465

                                                                       
Query: 328 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 387
           ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 466 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 525

                                                                   
Query: 388 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 526 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 581



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                       
Query: 452 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
           ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 608 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 667

                                                                       
Query: 512 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
           |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 668 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 727

                
Query: 572 ctcga 576
           |||||
Sbjct: 728 ctcga 732
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>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete
             sequence
          Length = 91539

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                         
Query: 88    gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 147
             ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 37018 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 37077

                                                                         
Query: 148   gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 207
             |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 37078 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 37137

                                                                         
Query: 208   gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 267
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 37138 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 37197

                                                                         
Query: 268   cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 327
              ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 37198 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 37257

                                                                         
Query: 328   cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 387
             ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 37258 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 37317

                                                                     
Query: 388   ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
             ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 37318 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 37373



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                         
Query: 452   tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
             ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 37400 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 37459

                                                                         
Query: 512   cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
             |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 37460 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 37519

                  
Query: 572   ctcga 576
             |||||
Sbjct: 37520 ctcga 37524
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>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
             complete sequence
          Length = 142556

 Score =  515 bits (260), Expect = e-143
 Identities = 332/356 (93%)
 Strand = Plus / Plus

                                                                         
Query: 88    gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 147
             ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 29062 gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 29121

                                                                         
Query: 148   gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 207
             |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 29122 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 29181

                                                                         
Query: 208   gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 267
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 29182 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 29241

                                                                         
Query: 268   cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 327
              ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 29242 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 29301

                                                                         
Query: 328   cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 387
             ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 29302 cgtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 29361

                                                                     
Query: 388   ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
             ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 29362 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 29417



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                         
Query: 452   tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
             ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 29444 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 29503

                                                                         
Query: 512   cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
             |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 29504 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 29563

                  
Query: 572   ctcga 576
             |||||
Sbjct: 29564 ctcga 29568
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>ref|XM_474080.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 810

 Score =  513 bits (259), Expect = e-142
 Identities = 331/355 (93%)
 Strand = Plus / Plus

                                                                       
Query: 89  atgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggtg 148
           |||||||||||||||||| | |||||||||||||||||||||||||||||||||||  ||
Sbjct: 1   atgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcatg 60

                                                                       
Query: 149 aaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgcg 208
           ||||| || ||  |||||||||| || || |||||||| |||||||||||||||||||||
Sbjct: 61  aaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgcg 120

                                                                       
Query: 209 ctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatgggc 268
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 121 ctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatgggg 180

                                                                       
Query: 269 gaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacggc 328
           ||||||||| | || ||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 181 gaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacggc 240

                                                                       
Query: 329 gtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccaccag 388
           || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 gtccgccacgtcgtcctccagtccgtccgctccgcctccctccgcgtccgctcccaccag 300

                                                                  
Query: 389 gagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
           |||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 gagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 355



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                       
Query: 452 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
           ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 382 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 441

                                                                       
Query: 512 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
           |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 442 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 501

                
Query: 572 ctcga 576
           |||||
Sbjct: 502 ctcga 506
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>dbj|AK106989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A07, full
           insert sequence
          Length = 1144

 Score =  507 bits (256), Expect = e-140
 Identities = 331/356 (92%)
 Strand = Plus / Plus

                                                                       
Query: 88  gatgtcggggcagacgcagagactgaacgtggtgccgacggtgacgatgctcggggtggt 147
           ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||  |
Sbjct: 61  gatgtcggggcagacgcagcgcctgaacgtggtgccgacggtgacgatgctcggggtcat 120

                                                                       
Query: 148 gaaggcgcgcctgatcggcgccacgcgggggcacgcgctgctcaagaagaagtcggacgc 207
           |||||| || ||  |||||||||| || || |||||||| ||||||||||||||||||||
Sbjct: 121 gaaggcccggctcgtcggcgccacccgcggccacgcgctcctcaagaagaagtcggacgc 180

                                                                       
Query: 208 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccaccaaggagtccatggg 267
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 gctcaccgtgcagttccgcgccatcctcaagaagatcgtcgccgccaaggagtccatggg 240

                                                                       
Query: 268 cgaggccatgcgcgcctcctccttctcgctcgccgaggccaagtacgtggccggcgacgg 327
            ||||||||| | || ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 241 ggaggccatgagggcgtcctccttctccctcgccgaggccaagtacgtcgccggcgacgg 300

                                                                       
Query: 328 cgtgcgccacgtcgtgctccagtccgtccgctccgcctcgctccgcgtccgctcccacca 387
           ||| |||||||| || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 301 cgtccgccacgttgtcctccagtccgtccgctccgcctccctccgcgtccgctcccacca 360

                                                                   
Query: 388 ggagaacgtcgccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 ggagaacgtcgccggtgtcaagctccccaagttcacccacttcgtcgaccccgccg 416



 Score =  184 bits (93), Expect = 2e-43
 Identities = 117/125 (93%)
 Strand = Plus / Plus

                                                                       
Query: 452 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
           ||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| 
Sbjct: 443 tcccccagcctcaccggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcg 502

                                                                       
Query: 512 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
           |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct: 503 cacgtcaaggccatcgaggtgctcgtcgagctcgcctcgctgcagacgtccttcctgacc 562

                
Query: 572 ctcga 576
           |||||
Sbjct: 563 ctcga 567
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>gb|AY104098.1| Zea mays PCO119647 mRNA sequence
          Length = 1235

 Score =  387 bits (195), Expect = e-104
 Identities = 297/331 (89%)
 Strand = Plus / Plus

                                                                       
Query: 113 aacgtggtgccgacggtgacgatgctcggggtggtgaaggcgcgcctgatcggcgccacg 172
           ||||| ||||||||||||||||||||||| ||  ||||||| || ||  ||||||| || 
Sbjct: 120 aacgtcgtgccgacggtgacgatgctcggcgtcatgaaggctcggctcgtcggcgcgacc 179

                                                                       
Query: 173 cgggggcacgcgctgctcaagaagaagtcggacgcgctcaccgtgcagttccgcgccatc 232
           || || ||||||||||| ||||||||||| |||||||| || || |||||||||||||||
Sbjct: 180 cgcggccacgcgctgctgaagaagaagtccgacgcgctgacggtccagttccgcgccatc 239

                                                                       
Query: 233 ctcaagaagatcgtcgccaccaaggagtccatgggcgaggccatgcgcgcctcctccttc 292
           |||||||||||||||||| |||||||||| ||||||||| | ||||||||||||||||||
Sbjct: 240 ctcaagaagatcgtcgccgccaaggagtcgatgggcgagacgatgcgcgcctcctccttc 299

                                                                       
Query: 293 tcgctcgccgaggccaagtacgtggccggcgacggcgtgcgccacgtcgtgctccagtcc 352
           || |||||||||||||||||||| || ||||||||||| ||||||||| | |||||||||
Sbjct: 300 tccctcgccgaggccaagtacgtcgctggcgacggcgtccgccacgtcatcctccagtcc 359

                                                                       
Query: 353 gtccgctccgcctcgctccgcgtccgctcccaccaggagaacgtcgccggggtcaagctg 412
           |||||| | || ||  |||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 360 gtccgcgcggcatccgtccgcgtccgctcccaccaggagaacgtggccggggtcaagctc 419

                                          
Query: 413 cccaagttcacccacttcgtcgaccccgccg 443
           |||||||||||||||||||||||||||||||
Sbjct: 420 cccaagttcacccacttcgtcgaccccgccg 450



 Score =  147 bits (74), Expect = 5e-32
 Identities = 113/126 (89%)
 Strand = Plus / Plus

                                                                       
Query: 452 tcccccagcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcc 511
           ||||| |||||||| ||||| || |||||||| ||||||||| ||||||||||| |||| 
Sbjct: 477 tccccgagcctcacgggcctggcccgcggcgggcagcaggtcgccgcctgccgctccgcg 536

                                                                       
Query: 512 cacgtcaaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcacc 571
           ||||||||||||||||||||||||||||||||||| || || || |||||||||||||| 
Sbjct: 537 cacgtcaaggccatcgaggtgctcgtcgagctcgcatctctgcaaacctccttcctcact 596

                 
Query: 572 ctcgac 577
           ||||||
Sbjct: 597 ctcgac 602
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>gb|AY105877.1| Zea mays PCO119646 mRNA sequence
          Length = 964

 Score =  174 bits (88), Expect = 2e-40
 Identities = 112/120 (93%)
 Strand = Plus / Plus

                                                                       
Query: 458 agcctcaccggcctcgcgcgcggcggccagcaggtctccgcctgccgcgccgcccacgtc 517
           ||||| || |||||||| |||||||| ||||||||| |||||||||||||||| ||||||
Sbjct: 90  agccttacgggcctcgcccgcggcgggcagcaggtcgccgcctgccgcgccgcgcacgtc 149

                                                                       
Query: 518 aaggccatcgaggtgctcgtcgagctcgcctccctccagacctccttcctcaccctcgac 577
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 150 aaggccatcgaggtgctcgtcgagctcgcctcgctccagacctccttcctcacgctcgac 209



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                         
Query: 398 gccggggtcaagctgcccaagttcacccacttcgtcgaccccgccg 443
           |||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 12  gccggggtcaagctcccgaagttcactcacttcgtcgaccccgccg 57
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 466     cggcctcgcgcgcggcggccagca 489
               ||||||||||||||||||||||||
Sbjct: 2457603 cggcctcgcgcgcggcggccagca 2457580
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>ref|XM_781278.1| PREDICTED: Strongylocentrotus purpuratus similar to Vacuolar ATP
           synthase subunit D (V-ATPase D subunit) (Vacuolar proton
           pump D subunit) (V-ATPase 28 kDa accessory protein)
           (LOC581267), mRNA
          Length = 744

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 539 gagctcgcctccctccagacctccttcctcac 570
           ||||| ||||||||||||||||||||| ||||
Sbjct: 436 gagctagcctccctccagacctccttcatcac 467
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 465     ccggcctcgcgcgcggcggccagcaggt 492
               ||||||||| ||||||||||||||||||
Sbjct: 1142623 ccggcctcgtgcgcggcggccagcaggt 1142650
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>emb|Z27080.1|CEF55H2 Caenorhabditis elegans Cosmid F55H2, complete sequence
          Length = 22950

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 517   caaggccatcgaggtgctcgtcgagctcgcc 547
             ||||||||||||  |||||||||||||||||
Sbjct: 11666 caaggccatcgaattgctcgtcgagctcgcc 11696
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>ref|NM_066693.2| Caenorhabditis elegans Vacuolar H ATPase family member (vha-14)
           (vha-14) mRNA, complete cds
          Length = 1152

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 517 caaggccatcgaggtgctcgtcgagctcgcc 547
           ||||||||||||  |||||||||||||||||
Sbjct: 435 caaggccatcgaattgctcgtcgagctcgcc 465
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 550    cctccagacctccttcctcaccc 572
              |||||||||||||||||||||||
Sbjct: 191408 cctccagacctccttcctcaccc 191430
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 466     cggcctcgcgcgcggcggccagc 488
               |||||||||||||||||||||||
Sbjct: 1348074 cggcctcgcgcgcggcggccagc 1348052



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     cgccatcctcaagaagatcg 245
               ||||||||||||||||||||
Sbjct: 3175222 cgccatcctcaagaagatcg 3175203



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 114     acgtggtgccgacggtgacgatgc 137
               ||||||||||||||| ||||||||
Sbjct: 2918585 acgtggtgccgacggcgacgatgc 2918562
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 550     cctccagacctccttcctcaccc 572
               |||||||||||||||||||||||
Sbjct: 1698388 cctccagacctccttcctcaccc 1698366
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>ref|XM_476599.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3268

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 487 gcaggtctccgcctgccgcgccgccc 512
           ||||||||||||||||| ||||||||
Sbjct: 299 gcaggtctccgcctgcctcgccgccc 324
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>ref|XM_471734.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2046

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 499 ctgccgcgccgcccacgtcaaggcca 524
           ||||||||||||| ||||||||||||
Sbjct: 93  ctgccgcgccgccaacgtcaaggcca 118
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>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16
          Length = 123385

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 475  gcgcggcggccagcaggtctccgcct 500
            ||||||||||||||||||| ||||||
Sbjct: 7611 gcgcggcggccagcaggtcgccgcct 7586
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>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 475    gcgcggcggccagcaggtctccgcct 500
              ||||||||||||||||||| ||||||
Sbjct: 143439 gcgcggcggccagcaggtcgccgcct 143414
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 475    gcgcggcggccagcaggtctccgcct 500
              ||||||||||||||||||| ||||||
Sbjct: 169226 gcgcggcggccagcaggtcgccgcct 169201
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>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03,
              complete sequence
          Length = 175555

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 499    ctgccgcgccgcccacgtcaaggcca 524
              ||||||||||||| ||||||||||||
Sbjct: 101143 ctgccgcgccgccaacgtcaaggcca 101168
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>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22,
            complete sequence
          Length = 174430

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 499  ctgccgcgccgcccacgtcaaggcca 524
            ||||||||||||| ||||||||||||
Sbjct: 1360 ctgccgcgccgccaacgtcaaggcca 1385
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 487     gcaggtctccgcctgccgcgccgccc 512
               ||||||||||||||||| ||||||||
Sbjct: 2123509 gcaggtctccgcctgcctcgccgccc 2123484



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 430      cgtcgaccccgccggcgcctcctccccc 457
                ||||||| ||||||||||| ||||||||
Sbjct: 23693746 cgtcgacgccgccggcgccccctccccc 23693719
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 522      ccatcgaggtgctcgtcgagctcgcc 547
                ||||||||||| ||||||||||||||
Sbjct: 29681451 ccatcgaggtgttcgtcgagctcgcc 29681426



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 501     gccgcgccgcccacgtcaaggccatcga 528
               |||||||||||| |||||||||| ||||
Sbjct: 8045834 gccgcgccgccctcgtcaaggccttcga 8045807
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>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0712G01
          Length = 87056

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 522   ccatcgaggtgctcgtcgagctcgcc 547
             ||||||||||| ||||||||||||||
Sbjct: 54565 ccatcgaggtgttcgtcgagctcgcc 54540
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>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1663_H12
          Length = 125422

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 522    ccatcgaggtgctcgtcgagctcgcc 547
              ||||||||||| ||||||||||||||
Sbjct: 125036 ccatcgaggtgttcgtcgagctcgcc 125011
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 465     ccggcctcgcgcgcggcggccagcag 490
               ||||||||| ||||||||||||||||
Sbjct: 2546274 ccggcctcgtgcgcggcggccagcag 2546249
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>dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D08, full
            insert sequence
          Length = 1380

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 522  ccatcgaggtgctcgtcgagctcgcc 547
            ||||||||||| ||||||||||||||
Sbjct: 1163 ccatcgaggtgttcgtcgagctcgcc 1138
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>dbj|AK070019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039B14, full
           insert sequence
          Length = 2399

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 499 ctgccgcgccgcccacgtcaaggcca 524
           ||||||||||||| ||||||||||||
Sbjct: 273 ctgccgcgccgccaacgtcaaggcca 298
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>dbj|AK065452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M19, full
           insert sequence
          Length = 3635

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 487 gcaggtctccgcctgccgcgccgccc 512
           ||||||||||||||||| ||||||||
Sbjct: 298 gcaggtctccgcctgcctcgccgccc 323
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>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1417_E01
          Length = 118058

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 487   gcaggtctccgcctgccgcgccgccc 512
             ||||||||||||||||| ||||||||
Sbjct: 79302 gcaggtctccgcctgcctcgccgccc 79277
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>dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein,
            complete cds, clone:R1479
          Length = 1223

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 522  ccatcgaggtgctcgtcgagctcgcc 547
            ||||||||||| ||||||||||||||
Sbjct: 1006 ccatcgaggtgttcgtcgagctcgcc 981
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>ref|NM_192555.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 299 gccgaggccaagtacgtggccggcgacggcgtg 331
           ||||||||||||||| | ||||||| |||||||
Sbjct: 652 gccgaggccaagtacctcgccggcgtcggcgtg 684
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>ref|XM_515296.1| PREDICTED: Pan troglodytes TGFB inducible early growth response 2
            (LOC459023), mRNA
          Length = 2377

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 438  ccgccggcgcctcctccccca 458
            |||||||||||||||||||||
Sbjct: 2286 ccgccggcgcctcctccccca 2266
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 466     cggcctcgcgcgcggcggcca 486
               |||||||||||||||||||||
Sbjct: 2408509 cggcctcgcgcgcggcggcca 2408489



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 317     gccggcgacggcgtgcgccacgtcgtgc 344
               |||| |||||||||||||| ||||||||
Sbjct: 1473124 gccgccgacggcgtgcgccgcgtcgtgc 1473097
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 471   tcgcgcgcggcggccagcagg 491
             |||||||||||||||||||||
Sbjct: 80992 tcgcgcgcggcggccagcagg 81012
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 471    tcgcgcgcggcggccagcagg 491
              |||||||||||||||||||||
Sbjct: 199141 tcgcgcgcggcggccagcagg 199121
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 466    cggcctcgcgcgcggcggccagcag 490
              ||||||||||||| |||||||||||
Sbjct: 226582 cggcctcgcgcgccgcggccagcag 226558
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 381  cccaccaggagaacgtcgccg 401
            |||||||||||||||||||||
Sbjct: 6388 cccaccaggagaacgtcgccg 6408
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 424    ccacttcgtcgaccccgccgg 444
              |||||||||||||||||||||
Sbjct: 234269 ccacttcgtcgaccccgccgg 234289
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>gb|AC073344.7| Homo sapiens BAC clone RP11-628B17 from 4, complete sequence
          Length = 192573

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 554   cagacctccttcctcaccctc 574
             |||||||||||||||||||||
Sbjct: 54699 cagacctccttcctcaccctc 54719
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 299      gccgaggccaagtacgtggccggcgacggcgtg 331
                ||||||||||||||| | ||||||| |||||||
Sbjct: 22911133 gccgaggccaagtacctcgccggcgtcggcgtg 22911101
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>gb|AC093592.3| Homo sapiens BAC clone RP11-50L21 from 4, complete sequence
          Length = 184533

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 554   cagacctccttcctcaccctc 574
             |||||||||||||||||||||
Sbjct: 94175 cagacctccttcctcaccctc 94195
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>gb|AF178441.1|AF178441 Sinorhizobium meliloti nutrient deprivation-responsive gene cluster,
            partial sequence
          Length = 4762

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 424  ccacttcgtcgaccccgccgg 444
            |||||||||||||||||||||
Sbjct: 3217 ccacttcgtcgaccccgccgg 3237
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 299    gccgaggccaagtacgtggccggcgacggcgtg 331
              ||||||||||||||| | ||||||| |||||||
Sbjct: 114690 gccgaggccaagtacctcgccggcgtcggcgtg 114658
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 523    catcgaggtgctcgtcgagctcgcc 547
              |||||| ||||||||||||||||||
Sbjct: 681830 catcgacgtgctcgtcgagctcgcc 681806
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>dbj|AK107346.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-G10, full
           insert sequence
          Length = 1175

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 299 gccgaggccaagtacgtggccggcgacggcgtg 331
           ||||||||||||||| | ||||||| |||||||
Sbjct: 755 gccgaggccaagtacctcgccggcgtcggcgtg 787
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 470     ctcgcgcgcggcggccagcag 490
               |||||||||||||||||||||
Sbjct: 3374992 ctcgcgcgcggcggccagcag 3375012
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 465     ccggcctcgcgcgcggcggc 484
               ||||||||||||||||||||
Sbjct: 3700110 ccggcctcgcgcgcggcggc 3700091
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>ref|NM_186999.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 cgtcgaccccgccggcgcctcctccccc 457
           ||||||| ||||||||||| ||||||||
Sbjct: 350 cgtcgacgccgccggcgccccctccccc 323
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    ctcgcgcgcggcggccagca 489
              ||||||||||||||||||||
Sbjct: 255731 ctcgcgcgcggcggccagca 255712
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>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete
             sequence
          Length = 155876

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   cggcgcctcctcccccagcc 461
             ||||||||||||||||||||
Sbjct: 80444 cggcgcctcctcccccagcc 80425
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>gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, complete sequence
          Length = 185754

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    cctcctcccccagcctcacc 466
              ||||||||||||||||||||
Sbjct: 117614 cctcctcccccagcctcacc 117633
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>ref|XM_752079.1| Ustilago maydis 521 hypothetical protein (UM01025.1) partial mRNA
          Length = 1845

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 267 gcgaggccatgcgcgcctcctccttctc 294
           ||||||||||||||||| ||| ||||||
Sbjct: 331 gcgaggccatgcgcgccgccttcttctc 304
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     cgccatcctcaagaagatcg 245
               ||||||||||||||||||||
Sbjct: 3412949 cgccatcctcaagaagatcg 3412930
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 229     catcctcaagaagatcgtcgccaccaag 256
               ||||||||| |||||| |||||||||||
Sbjct: 3724371 catcctcaacaagatcatcgccaccaag 3724344
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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
              complete sequence
          Length = 143301

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    ctccgcctgccgcgccgccc 512
              ||||||||||||||||||||
Sbjct: 121191 ctccgcctgccgcgccgccc 121172
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>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13,
            complete sequence
          Length = 113960

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 493  ctccgcctgccgcgccgccc 512
            ||||||||||||||||||||
Sbjct: 3978 ctccgcctgccgcgccgccc 3959
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>dbj|AK140355.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430220N06 product:bromodomain
           adjacent to zinc finger domain, 2A, full insert sequence
          Length = 3741

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 cggcgcctcctcccccagcc 461
           ||||||||||||||||||||
Sbjct: 537 cggcgcctcctcccccagcc 518
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 474     cgcgcggcggccagcaggtc 493
               ||||||||||||||||||||
Sbjct: 2871771 cgcgcggcggccagcaggtc 2871752
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 135     tgctcggggtggtgaaggcg 154
               ||||||||||||||||||||
Sbjct: 2886570 tgctcggggtggtgaaggcg 2886551
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>emb|AJ586111.1| Natrinema sp. XA3-1 16S rRNA gene, 23S rRNA gene (partial), IGS and
           ITS1, strain XA3-1
          Length = 5887

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 323 gacggcgtgcgccacgtcgt 342
           ||||||||||||||||||||
Sbjct: 513 gacggcgtgcgccacgtcgt 494
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 416    aagttcacccacttcgtcga 435
              ||||||||||||||||||||
Sbjct: 725882 aagttcacccacttcgtcga 725901
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     ccccgccggcgcctcctccc 455
               ||||||||||||||||||||
Sbjct: 1094790 ccccgccggcgcctcctccc 1094809
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 470     ctcgcgcgcggcggccagcaggtc 493
               ||||||||||| ||||||||||||
Sbjct: 4687881 ctcgcgcgcggtggccagcaggtc 4687904



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 317     gccggcgacggcgtgcgccacgtc 340
               |||||||||||| |||||||||||
Sbjct: 4213687 gccggcgacggcctgcgccacgtc 4213710
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 228     ccatcctcaagaagatcgtc 247
               ||||||||||||||||||||
Sbjct: 6634093 ccatcctcaagaagatcgtc 6634112
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     tcaccggcctcgcgcgcggc 481
               ||||||||||||||||||||
Sbjct: 2428017 tcaccggcctcgcgcgcggc 2427998
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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0046H10
          Length = 155544

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 501    gccgcgccgcccacgtcaaggccatcga 528
              |||||||||||| |||||||||| ||||
Sbjct: 153352 gccgcgccgccctcgtcaaggccttcga 153325
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>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592E11
          Length = 153734

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 501   gccgcgccgcccacgtcaaggccatcga 528
             |||||||||||| |||||||||| ||||
Sbjct: 69603 gccgcgccgccctcgtcaaggccttcga 69576
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 430   cgtcgaccccgccggcgcctcctccccc 457
             ||||||| ||||||||||| ||||||||
Sbjct: 38360 cgtcgacgccgccggcgccccctccccc 38333
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>dbj|AK111482.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B08, full
           insert sequence
          Length = 1181

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 493 ctccgcctgccgcgccgccc 512
           ||||||||||||||||||||
Sbjct: 89  ctccgcctgccgcgccgccc 108
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>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full
           insert sequence
          Length = 1690

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 430 cgtcgaccccgccggcgcctcctccccc 457
           ||||||| ||||||||||| ||||||||
Sbjct: 351 cgtcgacgccgccggcgccccctccccc 324
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     caagaagatcgtcgccacca 254
               ||||||||||||||||||||
Sbjct: 4781245 caagaagatcgtcgccacca 4781226
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   acgtggccggcgacggcgtg 331
             ||||||||||||||||||||
Sbjct: 76870 acgtggccggcgacggcgtg 76889
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>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence
          Length = 228657

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    cggcgcctcctcccccagcc 461
              ||||||||||||||||||||
Sbjct: 212816 cggcgcctcctcccccagcc 212797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,790,610
Number of Sequences: 3902068
Number of extensions: 3790610
Number of successful extensions: 98587
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93413
Number of HSP's gapped (non-prelim): 5174
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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