ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart15e11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463247.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1593 Score = 426 bits (215), Expect = e-116 Identities = 287/311 (92%) Strand = Plus / Plus Query: 169 atggggaagatggtgggcaagagctggcaggagtcgaggctgctgtggcacatcgcgttc 228 ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 atggggaagctggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcgttc 60 Query: 229 ccggccatcctcaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttcgcg 288 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 61 ccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtcggcttcgtg 120 Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 121 ggccacatcggccaggtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgagggc 180 Query: 349 ttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||||| |||||||| |||||||| || ||| |||||||| |||||||||||||| Sbjct: 181 ttcgcctacggtgtcctgctaggcatggggagtgcgttggagacgttgtgcgggcaggcg 240 Query: 409 gtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatctgc 468 ||||| || ||||||||| |||||| ||| |||||||||| ||||| ||||||||||| Sbjct: 241 gtgggtgctgggcaggtgtccatgctaggcgtctacatccaacgctcatggatcatctgt 300 Query: 469 ggcgccgccgc 479 |||||| |||| Sbjct: 301 ggcgccaccgc 311
>dbj|AK068484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I24, full insert sequence Length = 1915 Score = 426 bits (215), Expect = e-116 Identities = 287/311 (92%) Strand = Plus / Plus Query: 169 atggggaagatggtgggcaagagctggcaggagtcgaggctgctgtggcacatcgcgttc 228 ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 185 atggggaagctggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcgttc 244 Query: 229 ccggccatcctcaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttcgcg 288 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 245 ccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtcggcttcgtg 304 Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 305 ggccacatcggccaggtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgagggc 364 Query: 349 ttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||||| |||||||| |||||||| || ||| |||||||| |||||||||||||| Sbjct: 365 ttcgcctacggtgtcctgctaggcatggggagtgcgttggagacgttgtgcgggcaggcg 424 Query: 409 gtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatctgc 468 ||||| || ||||||||| |||||| ||| |||||||||| ||||| ||||||||||| Sbjct: 425 gtgggtgctgggcaggtgtccatgctaggcgtctacatccaacgctcatggatcatctgt 484 Query: 469 ggcgccgccgc 479 |||||| |||| Sbjct: 485 ggcgccaccgc 495
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 321 bits (162), Expect = 1e-84 Identities = 189/198 (95%) Strand = Plus / Minus Query: 169 atggggaagatggtgggcaagagctggcaggagtcgaggctgctgtggcacatcgcgttc 228 ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131746 atggggaagctggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcgttc 131687 Query: 229 ccggccatcctcaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttcgcg 288 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131686 ccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtcggcttcgtg 131627 Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 131626 ggccacatcggccaggtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgagggc 131567 Query: 349 ttcgcctacggcgtcctg 366 ||||||||||| |||||| Sbjct: 131566 ttcgcctacggtgtcctg 131549 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| || ||| |||||||| ||||||||||||||||||| || ||||||||| | Sbjct: 128740 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 128681 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgc 479 ||||| ||| |||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 128680 atgctaggcgtctacatccaacgctcatggatcatctgtggcgccaccgc 128631
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 321 bits (162), Expect = 1e-84 Identities = 189/198 (95%) Strand = Plus / Minus Query: 169 atggggaagatggtgggcaagagctggcaggagtcgaggctgctgtggcacatcgcgttc 228 ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 23683663 atggggaagctggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcgttc 23683604 Query: 229 ccggccatcctcaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttcgcg 288 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 23683603 ccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtcggcttcgtg 23683544 Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23683543 ggccacatcggccaggtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgagggc 23683484 Query: 349 ttcgcctacggcgtcctg 366 ||||||||||| |||||| Sbjct: 23683483 ttcgcctacggtgtcctg 23683466 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| || ||| |||||||| ||||||||||||||||||| || ||||||||| | Sbjct: 23680657 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 23680598 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgc 479 ||||| ||| |||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 23680597 atgctaggcgtctacatccaacgctcatggatcatctgtggcgccaccgc 23680548 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcg 417 ||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 4595844 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcg 4595891 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||| |||||| ||||||||||||||||||||||| Sbjct: 20604799 atggggagcgcggtggagacgctgtgcgggcaggcg 20604764 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 20679167 gctcggaatgggtagcgccgtggagacgctgtgcgggcaggcg 20679125 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 20586600 ggcatgggaagcgcggtggagacgctgtgtgggcaggcg 20586562 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggca 404 |||||||| || ||| ||||||||||||||||||| Sbjct: 20536105 ggcatggggagtgcggtggagacgctgtgcgggca 20536071 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 cgccgccgcgctggcgctcgc 491 ||||||||||||||||||||| Sbjct: 22437171 cgccgccgcgctggcgctcgc 22437191 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 ttcgcgggccacatcggcgaggtcgagctcgccgcc 318 ||||| |||||| ||||||| |||||||||||||| Sbjct: 4588956 ttcgccggccacctcggcgacctcgagctcgccgcc 4588991
>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete sequence Length = 120116 Score = 321 bits (162), Expect = 1e-84 Identities = 189/198 (95%) Strand = Plus / Minus Query: 169 atggggaagatggtgggcaagagctggcaggagtcgaggctgctgtggcacatcgcgttc 228 ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 15717 atggggaagctggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcgttc 15658 Query: 229 ccggccatcctcaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttcgcg 288 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 15657 ccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtcggcttcgtg 15598 Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 15597 ggccacatcggccaggtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgagggc 15538 Query: 349 ttcgcctacggcgtcctg 366 ||||||||||| |||||| Sbjct: 15537 ttcgcctacggtgtcctg 15520 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| || ||| |||||||| ||||||||||||||||||| || ||||||||| | Sbjct: 12711 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 12652 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgc 479 ||||| ||| |||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 12651 atgctaggcgtctacatccaacgctcatggatcatctgtggcgccaccgc 12602
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 321 bits (162), Expect = 1e-84 Identities = 189/198 (95%) Strand = Plus / Minus Query: 169 atggggaagatggtgggcaagagctggcaggagtcgaggctgctgtggcacatcgcgttc 228 ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 23676691 atggggaagctggtgagcaagagctggcaggagtcgaagctgctgtggcacatcgcgttc 23676632 Query: 229 ccggccatcctcaccgccgtcttccagttctccatcggcttcgtcaccgtcggcttcgcg 288 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 23676631 ccggccatcctgacggccgtcttccagttctccatcggcttcgtcaccgtcggcttcgtg 23676572 Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23676571 ggccacatcggccaggtcgagctcgccgccgtcaccgtcgtcgagaacgtcatcgagggc 23676512 Query: 349 ttcgcctacggcgtcctg 366 ||||||||||| |||||| Sbjct: 23676511 ttcgcctacggtgtcctg 23676494 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| || ||| |||||||| ||||||||||||||||||| || ||||||||| | Sbjct: 23673685 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 23673626 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgc 479 ||||| ||| |||||||||| ||||| ||||||||||| |||||| |||| Sbjct: 23673625 atgctaggcgtctacatccaacgctcatggatcatctgtggcgccaccgc 23673576 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcg 417 ||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 4595959 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcg 4596006 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||| |||||| ||||||||||||||||||||||| Sbjct: 20597828 atggggagcgcggtggagacgctgtgcgggcaggcg 20597793 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 20672196 gctcggaatgggtagcgccgtggagacgctgtgcgggcaggcg 20672154 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 20579629 ggcatgggaagcgcggtggagacgctgtgtgggcaggcg 20579591 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggca 404 |||||||| || ||| ||||||||||||||||||| Sbjct: 20529134 ggcatggggagtgcggtggagacgctgtgcgggca 20529100 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 cgccgccgcgctggcgctcgc 491 ||||||||||||||||||||| Sbjct: 22430200 cgccgccgcgctggcgctcgc 22430220 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 ttcgcgggccacatcggcgaggtcgagctcgccgcc 318 ||||| |||||| ||||||| |||||||||||||| Sbjct: 4589071 ttcgccggccacctcggcgacctcgagctcgccgcc 4589106
>ref|NM_195333.1| Oryza sativa (japonica cultivar-group) putative membrane protein (OSJNBa0034E15.6), mRNA Length = 1395 Score = 244 bits (123), Expect = 2e-61 Identities = 270/319 (84%) Strand = Plus / Plus Query: 189 gagctggcaggagtcgaggctgctgtggcacatcgcgttcccggccatcctcaccgccgt 248 ||||||||||||||||| ||||||||||| | |||| ||||||||| | ||| || | Sbjct: 27 gagctggcaggagtcgaagctgctgtggcgcgtcgccttcccggccgtgctcgtcgagtt 86 Query: 249 cttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcga 308 ||||||||||||||||||||||||| | | |||||| |||||| |||||| |||||| Sbjct: 87 gctccagttctccatcggcttcgtcacggccagcttcgtcggccacctcggcgtggtcga 146 Query: 309 gctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctgct 368 ||||||||| ||||||| |||| ||| | || | |||||||||||||||||||||||| | Sbjct: 147 gctcgccgcggtcaccgccgtcgagagcatcctggagggcttcgcctacggcgtcctgtt 206 Query: 369 cggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtgga 428 |||||||| |||||||||| |||||||||||||||||||||||||| |||| | |||| Sbjct: 207 tggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctgga 266 Query: 429 catgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgcgctggcgct 488 | |||| ||| ||||| | |||| || |||||| | ||||||||| ||||| ||||||| Sbjct: 267 cgtgctcggcctctacgtgcagcagtcgtggatcgtgtgcggcgccaccgcggtggcgct 326 Query: 489 cgcgccgacctacgccttc 507 | ||||||| ||||||||| Sbjct: 327 cacgccgacgtacgccttc 345
>dbj|AK106877.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E04, full insert sequence Length = 1740 Score = 244 bits (123), Expect = 2e-61 Identities = 270/319 (84%) Strand = Plus / Plus Query: 189 gagctggcaggagtcgaggctgctgtggcacatcgcgttcccggccatcctcaccgccgt 248 ||||||||||||||||| ||||||||||| | |||| ||||||||| | ||| || | Sbjct: 90 gagctggcaggagtcgaagctgctgtggcgcgtcgccttcccggccgtgctcgtcgagtt 149 Query: 249 cttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcga 308 ||||||||||||||||||||||||| | | |||||| |||||| |||||| |||||| Sbjct: 150 gctccagttctccatcggcttcgtcacggccagcttcgtcggccacctcggcgtggtcga 209 Query: 309 gctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctgct 368 ||||||||| ||||||| |||| ||| | || | |||||||||||||||||||||||| | Sbjct: 210 gctcgccgcggtcaccgccgtcgagagcatcctggagggcttcgcctacggcgtcctgtt 269 Query: 369 cggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtgga 428 |||||||| |||||||||| |||||||||||||||||||||||||| |||| | |||| Sbjct: 270 tggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctgga 329 Query: 429 catgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgcgctggcgct 488 | |||| ||| ||||| | |||| || |||||| | ||||||||| ||||| ||||||| Sbjct: 330 cgtgctcggcctctacgtgcagcagtcgtggatcgtgtgcggcgccaccgcggtggcgct 389 Query: 489 cgcgccgacctacgccttc 507 | ||||||| ||||||||| Sbjct: 390 cacgccgacgtacgccttc 408
>ref|NM_191377.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 176 bits (89), Expect = 5e-41 Identities = 188/221 (85%) Strand = Plus / Plus Query: 248 tcttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcg 307 ||||||||||| |||||| |||||||||| | ||||| |||||||||||| |||||| Sbjct: 110 tcttccagttcctcatcgggttcgtcaccgcggccttcgtcggccacatcggcaaggtcg 169 Query: 308 agctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctgc 367 |||||||||||||| |||||||| | |||| |||||||| |||||| |||| |||||| Sbjct: 170 agctcgccgccgtctccgtcgtcaacggcgtcgtcgagggcctcgccttcggcctcctgc 229 Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtgg 427 | |||||||| ||||||||||||||||||||||||||||||||||| || |||||| | Sbjct: 230 ttggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgc 289 Query: 428 acatgctgggcatctacatccagcgctcctggatcatctgc 468 ||||||||| ||||| | ||||| || ||| |||||||| Sbjct: 290 ggatgctgggcgtctacctgcagcggtcgtgggtcatctgc 330
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 147 bits (74), Expect = 4e-32 Identities = 107/118 (90%) Strand = Plus / Plus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 |||| ||| |||| |||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 429 cttctccttcggcttcctcctcggcatggggagcgcgctggagacgctgtgcgggcaggc 488 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || ||||||||||||| |||||||||||||||||| |||||||| ||||||||| Sbjct: 489 gttcggggcggggcaggtggccatgctgggcatctacatgcagcgctcgtggatcatc 546
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 7e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggt 425 |||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 35286678 gctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggt 35286737 Query: 426 ggacatgctgggcatctacatccagcgctcctggatcatc 465 || |||||||||||||||||| |||||||| ||||||||| Sbjct: 35286738 ggccatgctgggcatctacatgcagcgctcgtggatcatc 35286777
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 143 bits (72), Expect = 7e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggt 425 |||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 37012 gctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggt 37071 Query: 426 ggacatgctgggcatctacatccagcgctcctggatcatc 465 || |||||||||||||||||| |||||||| ||||||||| Sbjct: 37072 ggccatgctgggcatctacatgcagcgctcgtggatcatc 37111
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 143 bits (72), Expect = 7e-31 Identities = 93/100 (93%) Strand = Plus / Plus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggt 425 |||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 98728 gctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggt 98787 Query: 426 ggacatgctgggcatctacatccagcgctcctggatcatc 465 || |||||||||||||||||| |||||||| ||||||||| Sbjct: 98788 ggccatgctgggcatctacatgcagcgctcgtggatcatc 98827
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 139 bits (70), Expect = 1e-29 Identities = 151/178 (84%) Strand = Plus / Plus Query: 189 gagctggcaggagtcgaggctgctgtggcacatcgcgttcccggccatcctcaccgccgt 248 ||||||||||||||||| ||||||||||| | |||| ||||||||| | ||| || | Sbjct: 25167 gagctggcaggagtcgaagctgctgtggcgcgtcgccttcccggccgtgctcgtcgagtt 25226 Query: 249 cttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcga 308 ||||||||||||||||||||||||| | | |||||| |||||| |||||| |||||| Sbjct: 25227 gctccagttctccatcggcttcgtcacggccagcttcgtcggccacctcggcgtggtcga 25286 Query: 309 gctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctg 366 ||||||||| ||||||| |||| ||| | || | |||||||||||||||||||||||| Sbjct: 25287 gctcgccgcggtcaccgccgtcgagagcatcctggagggcttcgcctacggcgtcctg 25344 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| |||||||||| |||||||||||||||||||||||||| |||| | ||||| Sbjct: 25451 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 25510 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgcgctggcgctc 489 |||| ||| ||||| | |||| || |||||| | ||||||||| ||||| |||||||| Sbjct: 25511 gtgctcggcctctacgtgcagcagtcgtggatcgtgtgcggcgccaccgcggtggcgctc 25570 Query: 490 gcgccgacctacgccttc 507 ||||||| ||||||||| Sbjct: 25571 acgccgacgtacgccttc 25588
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 139 bits (70), Expect = 1e-29 Identities = 151/178 (84%) Strand = Plus / Plus Query: 189 gagctggcaggagtcgaggctgctgtggcacatcgcgttcccggccatcctcaccgccgt 248 ||||||||||||||||| ||||||||||| | |||| ||||||||| | ||| || | Sbjct: 6227609 gagctggcaggagtcgaagctgctgtggcgcgtcgccttcccggccgtgctcgtcgagtt 6227668 Query: 249 cttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcga 308 ||||||||||||||||||||||||| | | |||||| |||||| |||||| |||||| Sbjct: 6227669 gctccagttctccatcggcttcgtcacggccagcttcgtcggccacctcggcgtggtcga 6227728 Query: 309 gctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctg 366 ||||||||| ||||||| |||| ||| | || | |||||||||||||||||||||||| Sbjct: 6227729 gctcgccgcggtcaccgccgtcgagagcatcctggagggcttcgcctacggcgtcctg 6227786 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| |||||||||| |||||||||||||||||||||||||| |||| | ||||| Sbjct: 6227893 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 6227952 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgcgctggcgctc 489 |||| ||| ||||| | |||| || |||||| | ||||||||| ||||| |||||||| Sbjct: 6227953 gtgctcggcctctacgtgcagcagtcgtggatcgtgtgcggcgccaccgcggtggcgctc 6228012 Query: 490 gcgccgacctacgccttc 507 ||||||| ||||||||| Sbjct: 6228013 acgccgacgtacgccttc 6228030 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 9778350 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 9778390 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 9736970 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 9736926 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 9718717 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 9718673 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ggcgccgccgcgctggcgct 488 |||||||||||||||||||| Sbjct: 18354291 ggcgccgccgcgctggcgct 18354310 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 cgccgccgcgctggcgctcg 490 |||||||||||||||||||| Sbjct: 1677688 cgccgccgcgctggcgctcg 1677669
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 139 bits (70), Expect = 1e-29 Identities = 151/178 (84%) Strand = Plus / Plus Query: 189 gagctggcaggagtcgaggctgctgtggcacatcgcgttcccggccatcctcaccgccgt 248 ||||||||||||||||| ||||||||||| | |||| ||||||||| | ||| || | Sbjct: 6229195 gagctggcaggagtcgaagctgctgtggcgcgtcgccttcccggccgtgctcgtcgagtt 6229254 Query: 249 cttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcga 308 ||||||||||||||||||||||||| | | |||||| |||||| |||||| |||||| Sbjct: 6229255 gctccagttctccatcggcttcgtcacggccagcttcgtcggccacctcggcgtggtcga 6229314 Query: 309 gctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctg 366 ||||||||| ||||||| |||| ||| | || | |||||||||||||||||||||||| Sbjct: 6229315 gctcgccgcggtcaccgccgtcgagagcatcctggagggcttcgcctacggcgtcctg 6229372 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| |||||||||| |||||||||||||||||||||||||| |||| | ||||| Sbjct: 6229479 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 6229538 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgcggcgccgccgcgctggcgctc 489 |||| ||| ||||| | |||| || |||||| | ||||||||| ||||| |||||||| Sbjct: 6229539 gtgctcggcctctacgtgcagcagtcgtggatcgtgtgcggcgccaccgcggtggcgctc 6229598 Query: 490 gcgccgacctacgccttc 507 ||||||| ||||||||| Sbjct: 6229599 acgccgacgtacgccttc 6229616 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 9784389 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 9784429 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 9743009 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 9742965 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 9724756 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 9724712 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ggcgccgccgcgctggcgct 488 |||||||||||||||||||| Sbjct: 18364344 ggcgccgccgcgctggcgct 18364363 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 cgccgccgcgctggcgctcg 490 |||||||||||||||||||| Sbjct: 1677639 cgccgccgcgctggcgctcg 1677620
>ref|XM_483803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1635 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 ||||||| |||| |||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 279 cttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgcgggcaggc 338 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||| Sbjct: 339 gttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctggatcatc 396
>ref|XM_483802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 ||||||| |||| |||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 130 cttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgcgggcaggc 189 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||| Sbjct: 190 gttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctggatcatc 247
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 ||||||| |||| |||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 28178346 cttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgcgggcaggc 28178287 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||| Sbjct: 28178286 gttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctggatcatc 28178229 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||| |||||||||||||||||||||||||||||| Sbjct: 23707990 ggcatggcgagcgcgctggagacgctgtgcgggcaggcg 23708028 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggacatg 432 ||||| ||||||||||||||||| |||||||| || | |||||| |||| ||||| Sbjct: 27587545 atggggagcgcgctggagacgctatgcgggcaagcttttggcgcgaagcagcatcacatg 27587486 Query: 433 ctgggcatctacatccagcgctc 455 |||||||||||| | |||||||| Sbjct: 27587485 ctgggcatctacttgcagcgctc 27587463
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 ||||||| |||| |||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 61819 cttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgcgggcaggc 61760 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||| Sbjct: 61759 gttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctggatcatc 61702
>dbj|AK105950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C12, full insert sequence Length = 1635 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 ||||||| |||| |||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 279 cttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgcgggcaggc 338 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||| Sbjct: 339 gttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctggatcatc 396
>dbj|AK103815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147C23, full insert sequence Length = 1597 Score = 115 bits (58), Expect = 2e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggc 407 ||||||| |||| |||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 130 cttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgcgggcaggc 189 Query: 408 ggtgggcgcggggcaggtggacatgctgggcatctacatccagcgctcctggatcatc 465 | | || || ||||||||| |||||||||| ||||| ||||||| |||||||||||| Sbjct: 190 gttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctggatcatc 247
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 248 tcttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcg 307 ||||||||||| |||||| |||||||||| | ||||| |||||||||||| |||||| Sbjct: 32265296 tcttccagttcctcatcgggttcgtcaccgcggccttcgtcggccacatcggcaaggtcg 32265237 Query: 308 agctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctg 366 |||||||||||||| |||||||| | |||| |||||||| |||||| |||| ||||| Sbjct: 32265236 agctcgccgccgtctccgtcgtcaacggcgtcgtcgagggcctcgccttcggcctcctg 32265178 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| ||||||||||||||||||||||||||||||||||| || |||||| | Sbjct: 32265083 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 32265024 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgc 468 ||||||||| ||||| | ||||| || ||| |||||||| Sbjct: 32265023 atgctgggcgtctacctgcagcggtcgtgggtcatctgc 32264985 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 109 acactagctagctggcctggcctg 132 |||||||||||||||||||||||| Sbjct: 42383722 acactagctagctggcctggcctg 42383699
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 248 tcttccagttctccatcggcttcgtcaccgtcggcttcgcgggccacatcggcgaggtcg 307 ||||||||||| |||||| |||||||||| | ||||| |||||||||||| |||||| Sbjct: 136049 tcttccagttcctcatcgggttcgtcaccgcggccttcgtcggccacatcggcaaggtcg 135990 Query: 308 agctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcctg 366 |||||||||||||| |||||||| | |||| |||||||| |||||| |||| ||||| Sbjct: 135989 agctcgccgccgtctccgtcgtcaacggcgtcgtcgagggcctcgccttcggcctcctg 135931 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggac 429 |||||||| ||||||||||||||||||||||||||||||||||| || |||||| | Sbjct: 135836 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 135777 Query: 430 atgctgggcatctacatccagcgctcctggatcatctgc 468 ||||||||| ||||| | ||||| || ||| |||||||| Sbjct: 135776 atgctgggcgtctacctgcagcggtcgtgggtcatctgc 135738
>ref|NM_187397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1515 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 339 catcgagggcttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtg 398 |||| ||| ||||||||||||| || ||||||| |||||||||||| ||||||||||||| Sbjct: 162 catccaggtcttcgcctacggcctcatgctcgggatgggcagcgcggtggagacgctgtg 221 Query: 399 cgggcaggcg 408 |||||||||| Sbjct: 222 cgggcaggcg 231
>dbj|AK120864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025C14, full insert sequence Length = 1864 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 339 catcgagggcttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtg 398 |||| ||| ||||||||||||| || ||||||| |||||||||||| ||||||||||||| Sbjct: 385 catccaggtcttcgcctacggcctcatgctcgggatgggcagcgcggtggagacgctgtg 444 Query: 399 cgggcaggcg 408 |||||||||| Sbjct: 445 cgggcaggcg 454
>ref|XM_462973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1654 Score = 79.8 bits (40), Expect = 8e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 305 tcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcc 364 ||||||||||||||| | || ||| | | | || |||| ||| ||||||||||||| || Sbjct: 354 tcgagctcgccgccgcctccctcggcaacaccggcatccaggtcttcgcctacggcctca 413 Query: 365 tgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||| || ||||| |||||| ||||||||||||||||||||||| Sbjct: 414 tgctggggatggggagcgcggtggagacgctgtgcgggcaggcg 457
>ref|XM_462988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1913 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 305 tcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcc 364 ||||||||||||||| | || ||| | | |||| |||| || |||||||||||| || Sbjct: 281 tcgagctcgccgccgcctccctcggcaataacggcatccagatgttcgcctacggcctca 340 Query: 365 tgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 341 tgctcggaatgggtagcgccgtggagacgctgtgcgggcaggcg 384
>gb|BT009378.1| Triticum aestivum clone wlm96.pk031.e10:fis, full insert mRNA sequence Length = 1558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 289 ggccacatcggcgaggtcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggc 348 |||||||||||||| |||||||||||||| || || ||| | | |||||||| || Sbjct: 78 ggccacatcggcgacctcgagctcgccgccttctccatcgcctccaccgtcatcgccgga 137 Query: 349 ttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||| || ||| ||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 138 ttcaacttcgggttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcg 197
>dbj|AK102204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087G07, full insert sequence Length = 1918 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 305 tcgagctcgccgccgtcaccgtcgtccagaacgtcatcgagggcttcgcctacggcgtcc 364 ||||||||||||||| | || ||| | | |||| |||| || |||||||||||| || Sbjct: 295 tcgagctcgccgccgcctccctcggcaataacggcatccagatgttcgcctacggcctca 354 Query: 365 tgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 355 tgctcggaatgggtagcgccgtggagacgctgtgcgggcaggcg 398
>ref|XM_482980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2066 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 362 tcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 372 tcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcg 418
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 19858294 gctcgggatgggcagcgcggtggagacgctgtgcgggcaggcg 19858336 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 385 ctggagacgctgtgcgggcaggcg 408 |||||||||||||||||||||||| Sbjct: 18904863 ctggagacgctgtgcgggcaggcg 18904840
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 22944 gctcgggatgggcagcgcggtggagacgctgtgcgggcaggcg 22986
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 98453 gctcgggatgggcagcgcggtggagacgctgtgcgggcaggcg 98495
>dbj|AK067748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118K06, full insert sequence Length = 2067 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 362 tcctgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 372 tcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcg 418
>dbj|AK101639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055G23, full insert sequence Length = 1734 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 348 cttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtgcgggca 404 ||||||||||||| || |||| |||||||| || ||| ||||||||||||||||||| Sbjct: 388 cttcgcctacggcctcatgctgggcatggggagtgcggtggagacgctgtgcgggca 444
>gb|BT018805.1| Zea mays clone EL01N0529G01.d mRNA sequence Length = 1984 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcg 417 ||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 440 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcg 487
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcg 417 ||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct: 36799 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcg 36846 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 ttcgcgggccacatcggcgaggtcgagctcgccgcc 318 ||||| |||||| ||||||| |||||||||||||| Sbjct: 29911 ttcgccggccacctcggcgacctcgagctcgccgcc 29946
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||| |||||||||||||||||||||||||||||| Sbjct: 115586 ggcatggcgagcgcgctggagacgctgtgcgggcaggcg 115624
>ref|NM_195893.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBa0045C13.2), mRNA Length = 1434 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 251 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 291
>ref|NM_195888.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.11), mRNA Length = 975 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 199 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 243
>ref|NM_195885.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.8), mRNA Length = 1545 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 280 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 324
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 130875 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 130915 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 89495 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 89451 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 71242 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 71198
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 10829 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 10869
>dbj|AK105578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E01, full insert sequence Length = 1782 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 379 agcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcag 423 ||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 432 agcgcgctggacacgctgtgcgggcaggcgtacggcgcggggcag 476
>dbj|AK103119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H22, full insert sequence Length = 1743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 313 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 353
>dbj|AK073245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012J16, full insert sequence Length = 1759 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 368 tcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||||||| ||||||||||| |||||||||||||||||| Sbjct: 324 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcg 364
>emb|AM183309.1| Colocasia esculenta microsatellite, clone Ces-1B03 Length = 242 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 379 agcgcgctggagacgctgtgcgggcaggc 407 ||||||||||||||||||||||||||||| Sbjct: 179 agcgcgctggagacgctgtgcgggcaggc 207
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||| |||||| ||||||||||||||||||||||| Sbjct: 18556 atggggagcgcggtggagacgctgtgcgggcaggcg 18521 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 366 gctcggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 92924 gctcggaatgggtagcgccgtggagacgctgtgcgggcaggcg 92882 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 357 ggcatgggaagcgcggtggagacgctgtgtgggcaggcg 319
>gb|BT008917.1| Triticum aestivum clone wpa1c.pk009.o19:fis, full insert mRNA sequence Length = 1977 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 339 catcgagggcttcgcctacggcgtcctgctcggcatgggcagcgcgctggagacgctgtg 398 |||| ||| ||||||||||||| || |||| |||||||| || ||| ||||||| || || Sbjct: 391 catccaggtcttcgcctacggcctcatgcttggcatggggagtgcggtggagactctatg 450 Query: 399 cgggcaggcggtgggcgcggggcaggtggacatgctgggcatctacat 446 ||||||||| |||||| || | |||||||||||||||||||| Sbjct: 451 tgggcaggcgtacggcgcgaacaagttcgacatgctgggcatctacat 498
>ref|XM_483675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1936 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggacatg 432 ||||| ||||||||||||||||| |||||||| || | |||||| |||| ||||| Sbjct: 439 atggggagcgcgctggagacgctatgcgggcaagcttttggcgcgaagcagcatcacatg 498 Query: 433 ctgggcatctacatccagcgctc 455 |||||||||||| | |||||||| Sbjct: 499 ctgggcatctacttgcagcgctc 521
>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete sequence Length = 101073 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||||| |||||| ||||||||||||| ||||||||| Sbjct: 100665 ggcatgggaagcgcggtggagacgctgtgtgggcaggcg 100627 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 370 ggcatgggcagcgcgctggagacgctgtgcgggca 404 |||||||| || ||| ||||||||||||||||||| Sbjct: 50170 ggcatggggagtgcggtggagacgctgtgcgggca 50136
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggacatg 432 ||||| ||||||||||||||||| |||||||| || | |||||| |||| ||||| Sbjct: 69835 atggggagcgcgctggagacgctatgcgggcaagcttttggcgcgaagcagcatcacatg 69776 Query: 433 ctgggcatctacatccagcgctc 455 |||||||||||| | |||||||| Sbjct: 69775 ctgggcatctacttgcagcgctc 69753
>dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043J23, full insert sequence Length = 1936 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcggggcaggtggacatg 432 ||||| ||||||||||||||||| |||||||| || | |||||| |||| ||||| Sbjct: 439 atggggagcgcgctggagacgctatgcgggcaagcttttggcgcgaagcagcatcacatg 498 Query: 433 ctgggcatctacatccagcgctc 455 |||||||||||| | |||||||| Sbjct: 499 ctgggcatctacttgcagcgctc 521
>gb|BT019018.1| Zea mays clone Contig516.F mRNA sequence Length = 1546 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 384 gctggagacgctgtgcgggcaggcggtgggcgcg 417 ||||||||||||||||||||||||| | |||||| Sbjct: 14 gctggagacgctgtgcgggcaggcgttcggcgcg 47
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 468 cggcgccgccgcgctggcgctcgcgc 493 |||||||||||||||||||||||||| Sbjct: 3047068 cggcgccgccgcgctggcgctcgcgc 3047043 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 470 gcgccgccgcgctggcgctcgcgc 493 |||||||||||||||||||||||| Sbjct: 4360142 gcgccgccgcgctggcgctcgcgc 4360165 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 471 cgccgccgcgctggcgctcgcgccg 495 ||||||||||| ||||||||||||| Sbjct: 579777 cgccgccgcgcaggcgctcgcgccg 579753 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 cgccgcgctggcgctcgcgc 493 |||||||||||||||||||| Sbjct: 3983866 cgccgcgctggcgctcgcgc 3983885 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 tcggcgaggtcgagctcgcc 315 |||||||||||||||||||| Sbjct: 2185756 tcggcgaggtcgagctcgcc 2185775
>ref|XM_450946.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1712 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 282 cttcgcgggccacatcggcgaggtcgagctcgccgcc 318 |||||| |||||||||||||| |||||||||||||| Sbjct: 278 cttcgccggccacatcggcgacctcgagctcgccgcc 314
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 282 cttcgcgggccacatcggcgaggtcgagctcgccgcc 318 |||||| |||||||||||||| |||||||||||||| Sbjct: 17722772 cttcgccggccacatcggcgacctcgagctcgccgcc 17722808
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 282 cttcgcgggccacatcggcgaggtcgagctcgccgcc 318 |||||| |||||||||||||| |||||||||||||| Sbjct: 31406 cttcgccggccacatcggcgacctcgagctcgccgcc 31442
>dbj|AK103478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130E19, full insert sequence Length = 1712 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 282 cttcgcgggccacatcggcgaggtcgagctcgccgcc 318 |||||| |||||||||||||| |||||||||||||| Sbjct: 278 cttcgccggccacatcggcgacctcgagctcgccgcc 314
>gb|BT024034.1| Zea mays clone EL01N0423H06 mRNA sequence Length = 1933 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 365 tgctcggcatgggcagcgcgctggagacgctgtgcgggcaggcggtgggcgcg 417 |||| ||||||| ||||||||||||||||||| || ||||||| | |||||| Sbjct: 397 tgctgggcatggcgagcgcgctggagacgctgtccgtgcaggcgttcggcgcg 449
>ref|XM_462971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 373 atgggcagcgcgctggagacgctgtgcgggcaggcg 408 ||||| |||||| ||||||||||||| ||||||||| Sbjct: 1 atgggaagcgcggtggagacgctgtgtgggcaggcg 36
>ref|XM_478265.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 385 ctggagacgctgtgcgggcaggcg 408 |||||||||||||||||||||||| Sbjct: 292 ctggagacgctgtgcgggcaggcg 315
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 109 acactagctagctggcctggcctg 132 |||||||||||||||||||||||| Sbjct: 155679 acactagctagctggcctggcctg 155656
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 109 acactagctagctggcctggcctg 132 |||||||||||||||||||||||| Sbjct: 43060 acactagctagctggcctggcctg 43037
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 385 ctggagacgctgtgcgggcaggcg 408 |||||||||||||||||||||||| Sbjct: 6848 ctggagacgctgtgcgggcaggcg 6825
>dbj|AK120682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C05, full insert sequence Length = 1623 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 385 ctggagacgctgtgcgggcaggcg 408 |||||||||||||||||||||||| Sbjct: 388 ctggagacgctgtgcgggcaggcg 411
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 290 gccacatcggcgaggtcgagctcgccg 316 ||||||||||||||||||||| ||||| Sbjct: 988819 gccacatcggcgaggtcgagcccgccg 988845 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 gctggcgctcgcgccgacct 499 |||||||||||||||||||| Sbjct: 3119815 gctggcgctcgcgccgacct 3119834
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 ggcgccgccgcgctggcgctcgc 491 ||||||||||||||||||||||| Sbjct: 2659723 ggcgccgccgcgctggcgctcgc 2659745
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 471 cgccgccgcgctggcgctcgcgc 493 ||||||||||||||||||||||| Sbjct: 2726224 cgccgccgcgctggcgctcgcgc 2726246
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtc 306 ||||||||||||||||||||||| Sbjct: 3873503 tcgcgggccacatcggcgaggtc 3873525
>gb|AF005842.1|AF005842 Rhodobacter sphaeroides C4-dicarboxylate binding-protein precursor (dctP), small integral membrane transport protein (dctQ) and large integral membrane transport protein (dctM) genes, complete cds Length = 3718 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 469 ggcgccgccgcgctggcgctcgc 491 ||||||||||||||||||||||| Sbjct: 154 ggcgccgccgcgctggcgctcgc 176
>ref|NM_118696.3| Arabidopsis thaliana antiporter/ drug transporter AT4G25640 mRNA, complete cds Length = 1790 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 292 cacatcggcgaggtcgagctcgccgccgtc 321 ||||||||||| ||||||||| |||||||| Sbjct: 278 cacatcggcgaagtcgagctctccgccgtc 307
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 467 gcggcgccgccgcgctggcgctcgcg 492 |||||||||||| ||||||||||||| Sbjct: 234994 gcggcgccgccgagctggcgctcgcg 234969
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 292 cacatcggcgaggtcgagctcgccgccgtc 321 ||||||||||| ||||||||| |||||||| Sbjct: 161012 cacatcggcgaagtcgagctctccgccgtc 160983
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Minus Query: 292 cacatcggcgaggtcgagctcgccgccgtc 321 ||||||||||| ||||||||| |||||||| Sbjct: 9505 cacatcggcgaagtcgagctctccgccgtc 9476
>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE), beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative methoxymalonyl-CoA synthase (sorC), reductase (sorR), soraphen polyketide synthase A (sorA), soraphen polyketide synthase B (sorB), O-methyltransferase (sorM), beta-mannanase, and xylanse-arabinofuranosidase bifunctional enzyme genes, complete cds; and unknown genes Length = 67523 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 289 ggccacatcggcgaggtcgagctcgc 314 |||||||||||||||| ||||||||| Sbjct: 34804 ggccacatcggcgagggcgagctcgc 34779
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 470 gcgccgccgcgctggcgctcgc 491 |||||||||||||||||||||| Sbjct: 3436537 gcgccgccgcgctggcgctcgc 3436558
>dbj|AB091435.1| Burkholderia multivorans genes for probable lipoprotein transmembrane, 3-isopropylmalate dehydratase large and small subunits, 3-isopropylmalate dehydrogenase oxidoreductase, aspartate-semialdehyde dehydrogenase, probable transmembrane protein, tRNA pseudouridine synthase, N-(5'-phosphoribosyl) anthranilate isomerase, tryptophan synthase beta chain, probable DNA-methyltransferasee, tryptophan synthase alpha chain, acetyl-CoA carboxylase beta subunit, partial and complete cds Length = 12977 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 471 cgccgccgcgctggcgctcgcg 492 |||||||||||||||||||||| Sbjct: 1973 cgccgccgcgctggcgctcgcg 1994
>ref|NM_126449.3| Arabidopsis thaliana antiporter/ drug transporter/ transporter AT2G04080 mRNA, complete cds Length = 1626 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtcgagctcgccg 316 |||| ||||||||||||||| | |||||||||| Sbjct: 224 tcgccggccacatcggcgagttggagctcgccg 256
>ref|NM_019892.3| Homo sapiens inositol polyphosphate-5-phosphatase, 72 kDa (INPP5E), mRNA Length = 3440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gggcaggcggtgggcgcgggg 420 ||||||||||||||||||||| Sbjct: 974 gggcaggcggtgggcgcgggg 954
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 471 cgccgccgcgctggcgctcgc 491 ||||||||||||||||||||| Sbjct: 32418 cgccgccgcgctggcgctcgc 32438
>gb|BC028032.1| Homo sapiens inositol polyphosphate-5-phosphatase, 72 kDa, mRNA (cDNA clone MGC:39911 IMAGE:5242186), complete cds Length = 3440 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gggcaggcggtgggcgcgggg 420 ||||||||||||||||||||| Sbjct: 974 gggcaggcggtgggcgcgggg 954
>gb|BC110356.1| Homo sapiens inositol polyphosphate-5-phosphatase, 72 kDa, mRNA (cDNA clone IMAGE:5248521), complete cds Length = 1615 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gggcaggcggtgggcgcgggg 420 ||||||||||||||||||||| Sbjct: 993 gggcaggcggtgggcgcgggg 973
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3' end of the gene for activator of G-protein signalling 3 (AGS3), two novel genes, the CARD9 gene for caspase recruitment domain family member 9, the SNAPC4 gene for a 190kDa small nuclear RNA activating complex polypeptide 4, the SDCCAG3 gene for serologically defined colon cancer antigen 3, the INPP5E gene for a 72kDa inositol polyphosphate-5-phosphatase, the gene for phosphatidylinositol polyphosphate 5-phosphatase type IV (PPI5PIV), a novel gene (KIAA0310), the 3' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and twenty CpG islands, complete sequence Length = 188462 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 400 gggcaggcggtgggcgcgggg 420 ||||||||||||||||||||| Sbjct: 82455 gggcaggcggtgggcgcgggg 82475
>emb|AL832846.1|HSM804157 Homo sapiens mRNA; cDNA DKFZp667G1325 (from clone DKFZp667G1325) Length = 3400 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gggcaggcggtgggcgcgggg 420 ||||||||||||||||||||| Sbjct: 993 gggcaggcggtgggcgcgggg 973
>gb|AY026363.3| Streptomyces venezuelae decarboxylase JadN (jadN), JadX (jadX), NDP-hexose 2,3-dehydratase (jadO), NDP-hexose 3-ketoreductase (jadP), NDP-glucose phosphate nucleotidyltransferase (jadQ), glycosyltransferase (jadS), NDP-hexose 4,6-dehydratase (jadT), NDP-4-keto-6-deoxyhexose 5-epimerase (jadU), NDP-4-keto-6-deoxyhexose 4-ketoreductase (jadV), JadR* (jadR*), and JadY (jadY) genes, complete cds; and JadZ (jadZ) gene, partial cds Length = 12543 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gagctcgccgccgtcaccgtcgtcc 331 ||||||||||||||||||| ||||| Sbjct: 1666 gagctcgccgccgtcaccgccgtcc 1690
>gb|AC007178.6| Arabidopsis thaliana chromosome 2 clone F3L12 map mi320, complete sequence Length = 116149 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtcgagctcgccg 316 |||| ||||||||||||||| | |||||||||| Sbjct: 45244 tcgccggccacatcggcgagttggagctcgccg 45276
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 360 cgtcctgctcggcatgggcagcgcgctgg 388 ||||||||||||| ||||| ||||||||| Sbjct: 293683 cgtcctgctcggcgtgggcggcgcgctgg 293711 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 catcggcgaggtcgagctcgccgcc 318 |||||||||||||||||| |||||| Sbjct: 34658 catcggcgaggtcgagcttgccgcc 34682
>ref|XM_393740.2| PREDICTED: Apis mellifera similar to CG2380-PA, isoform A (LOC410259), mRNA Length = 2382 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 298 ggcgaggtcgagctcgccgccgtca 322 |||||| |||||||||||||||||| Sbjct: 1784 ggcgagttcgagctcgccgccgtca 1760
>emb|BX819408.1|CNS0A9RE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZE11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1489 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtcgagctcgccg 316 |||| ||||||||||||||| | |||||||||| Sbjct: 169 tcgccggccacatcggcgagttggagctcgccg 201
>emb|BX819355.1|CNS0A82E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1494 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtcgagctcgccg 316 |||| ||||||||||||||| | |||||||||| Sbjct: 169 tcgccggccacatcggcgagttggagctcgccg 201
>gb|BT005511.1| Arabidopsis thaliana clone U50644 unknown protein (At2g04080) mRNA, complete cds Length = 1462 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtcgagctcgccg 316 |||| ||||||||||||||| | |||||||||| Sbjct: 164 tcgccggccacatcggcgagttggagctcgccg 196
>gb|AC026620.17| Homo sapiens chromosome 17, clone RP11-443G13, complete sequence Length = 156300 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 tgatggggaagatggtgggca 187 ||||||||||||||||||||| Sbjct: 95981 tgatggggaagatggtgggca 95961
>gb|AF187891.1|AF187891 Homo sapiens phosphatidylinositol polyphosphate 5-phosphatase type IV mRNA, complete cds Length = 3109 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 400 gggcaggcggtgggcgcgggg 420 ||||||||||||||||||||| Sbjct: 693 gggcaggcggtgggcgcgggg 673
>dbj|AK118147.1| Arabidopsis thaliana At2g04080 mRNA for unknown protein, complete cds, clone: RAFL19-45-A01 Length = 1599 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 284 tcgcgggccacatcggcgaggtcgagctcgccg 316 |||| ||||||||||||||| | |||||||||| Sbjct: 173 tcgccggccacatcggcgagttggagctcgccg 205
>ref|NM_194693.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0020E23.10), mRNA Length = 1728 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 cgccgccgcgctggcgctcg 490 |||||||||||||||||||| Sbjct: 174 cgccgccgcgctggcgctcg 193
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence Length = 121820 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 301 gaggtcgagctcgccgccgtcaccgtcg 328 |||||| ||||||||||||| ||||||| Sbjct: 72557 gaggtcaagctcgccgccgtgaccgtcg 72530
>ref|XM_462962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1206 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 atgggcagcgcgctggagacgctgtgcgggca 404 ||||| || ||| ||||||||||||||||||| Sbjct: 1 atggggagtgcggtggagacgctgtgcgggca 32
>ref|NM_187667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 330 Score = 40.1 bits (20), Expect = 7.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 283 ttcgcgggccacatcggcgaggtcgagctcgccgcc 318 ||||| |||||| ||||||| |||||||||||||| Sbjct: 211 ttcgccggccacctcggcgacctcgagctcgccgcc 246
>ref|XM_472177.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 ctggagacgctgtgcgggcaggcg 408 ||||| |||||||||||||||||| Sbjct: 280 ctggacacgctgtgcgggcaggcg 303
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 tcgagctcgccgccgtcaccgtcg 328 |||||||||||||| ||||||||| Sbjct: 62743 tcgagctcgccgccatcaccgtcg 62720
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 tcggcgaggtcgagctcgccgccg 319 |||||||||||| ||||||||||| Sbjct: 1382664 tcggcgaggtcgcgctcgccgccg 1382641
>ref|XM_598135.2| PREDICTED: Bos taurus similar to glutamate receptor, metabotropic 2 precursor (LOC519904), mRNA Length = 2857 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tgcgggcaggcggtgggcgc 416 |||||||||||||||||||| Sbjct: 1406 tgcgggcaggcggtgggcgc 1425
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 gcgctcgcgccgacctacgc 503 |||||||||||||||||||| Sbjct: 2200331 gcgctcgcgccgacctacgc 2200350
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 gcaggcggtgggcgcggggc 421 |||||||||||||||||||| Sbjct: 852816 gcaggcggtgggcgcggggc 852835
>gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, complete sequence Length = 241576 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gggcgcggggcaggtggaca 430 |||||||||||||||||||| Sbjct: 136610 gggcgcggggcaggtggaca 136629
>gb|AC116119.12| Mus musculus chromosome 12, clone RP23-76D19, complete sequence Length = 264410 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 agaactcctctctcacatccatcc 66 |||| ||||||||||||||||||| Sbjct: 152438 agaattcctctctcacatccatcc 152415
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 cgcgctggcgctcgcgccga 496 |||||||||||||||||||| Sbjct: 500805 cgcgctggcgctcgcgccga 500786
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 ccgccgcgctggcgctcgcg 492 |||||||||||||||||||| Sbjct: 2447734 ccgccgcgctggcgctcgcg 2447715
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gctcgccgccgtcaccgtcg 328 |||||||||||||||||||| Sbjct: 1115259 gctcgccgccgtcaccgtcg 1115240
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 cgccgcgctggcgctcgcgc 493 |||||||||||||||||||| Sbjct: 2477219 cgccgcgctggcgctcgcgc 2477200
>gb|AC092489.4| Oryza sativa chromosome 10 BAC OSJNBa0066I08 genomic sequence, complete sequence Length = 25375 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ggcgccgccgcgctggcgct 488 |||||||||||||||||||| Sbjct: 4882 ggcgccgccgcgctggcgct 4901
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 cgccgccgcgctggcgctcg 490 |||||||||||||||||||| Sbjct: 1677688 cgccgccgcgctggcgctcg 1677669
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 gccatcctcaccgccgtcttccag 255 ||||||||||||| |||||||||| Sbjct: 2122591 gccatcctcaccggcgtcttccag 2122568
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 gcgctcgcgccgacctacgc 503 |||||||||||||||||||| Sbjct: 361954 gcgctcgcgccgacctacgc 361973
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 gcggcgccgccgcgctggcg 486 |||||||||||||||||||| Sbjct: 82635 gcggcgccgccgcgctggcg 82654
>gb|AC025098.5| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0020E23, complete sequence Length = 151359 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 cgccgccgcgctggcgctcg 490 |||||||||||||||||||| Sbjct: 74785 cgccgccgcgctggcgctcg 74766
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 gcgctcgcgccgacctacgc 503 |||||||||||||||||||| Sbjct: 1626347 gcgctcgcgccgacctacgc 1626328
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 ctggagacgctgtgcgggcaggcg 408 ||||| |||||||||||||||||| Sbjct: 18223993 ctggacacgctgtgcgggcaggcg 18224016
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gcggcgccgccgcgctggcg 486 |||||||||||||||||||| Sbjct: 19433015 gcggcgccgccgcgctggcg 19432996 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcgccgccgtcaccgtcgtccag 333 |||||||||| ||||||||||||| Sbjct: 10766077 ctcgccgccgccaccgtcgtccag 10766054
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 509 cggngcccatcctccgcgcgctc 531 ||| ||||||||||||||||||| Sbjct: 28780722 cggagcccatcctccgcgcgctc 28780744
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 tcgagctcgccgccgtcaccgtcg 328 |||||||||||||| ||||||||| Sbjct: 25328139 tcgagctcgccgccatcaccgtcg 25328116
>gb|AF546141.1| Streptomyces ghanaensis UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10371 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 tcgagctcgccgccgtcacc 324 |||||||||||||||||||| Sbjct: 3801 tcgagctcgccgccgtcacc 3820
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 ggcgctcgcgccgacctacg 502 |||||||||||||||||||| Sbjct: 2286680 ggcgctcgcgccgacctacg 2286699 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gctcgccgccgtcaccgtcg 328 |||||||||||||||||||| Sbjct: 703713 gctcgccgccgtcaccgtcg 703694
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 40.1 bits (20), Expect = 7.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 509 cggngcccatcctccgcgcgctc 531 ||| ||||||||||||||||||| Sbjct: 88497 cggagcccatcctccgcgcgctc 88519
>dbj|AK106931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-C03, full insert sequence Length = 2328 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcgccgccgtcaccgtcgtccag 333 |||||||||| ||||||||||||| Sbjct: 425 ctcgccgccgccaccgtcgtccag 402
>dbj|AK099847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109H18, full insert sequence Length = 2227 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcgccgccgtcaccgtcgtccag 333 |||||||||| ||||||||||||| Sbjct: 342 ctcgccgccgccaccgtcgtccag 319
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gccgcgctggcgctcgcgcc 494 |||||||||||||||||||| Sbjct: 2713629 gccgcgctggcgctcgcgcc 2713648 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 ggcgaggtcgagctcgccgc 317 |||||||||||||||||||| Sbjct: 166091 ggcgaggtcgagctcgccgc 166110
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cggcatgggcagcgcgctgg 388 |||||||||||||||||||| Sbjct: 124864 cggcatgggcagcgcgctgg 124845
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 369 cggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||||| | |||| || || |||||||||||||||||| Sbjct: 133768 cggcatggccggcgccctcgacacgctgtgcgggcaggcg 133729
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 369 cggcatgggcagcgcgctggagacgctgtgcgggcaggcg 408 |||||||| | |||| || || |||||||||||||||||| Sbjct: 126236 cggcatggccggcgccctcgacacgctgtgcgggcaggcg 126197
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cgtcaccgtcggcttcgcgg 289 |||||||||||||||||||| Sbjct: 1974299 cgtcaccgtcggcttcgcgg 1974318
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gcgccgccgcgctggcgctc 489 |||||||||||||||||||| Sbjct: 4108156 gcgccgccgcgctggcgctc 4108137
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cgtcaccgtcggcttcgcgg 289 |||||||||||||||||||| Sbjct: 2342195 cgtcaccgtcggcttcgcgg 2342176 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 tcatctgcggcgccgccgcgctgg 484 ||||| |||||||||||||||||| Sbjct: 1761456 tcatccgcggcgccgccgcgctgg 1761433
>gb|L20945.1|CREEZYA Chlamydomonas reinhardtii ezy-1 mRNA, complete cds Length = 1904 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gctcgccgccgtcaccgtcg 328 |||||||||||||||||||| Sbjct: 785 gctcgccgccgtcaccgtcg 766
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gcggcgccgccgcgctggcg 486 |||||||||||||||||||| Sbjct: 19359242 gcggcgccgccgcgctggcg 19359223 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcgccgccgtcaccgtcgtccag 333 |||||||||| ||||||||||||| Sbjct: 10765776 ctcgccgccgccaccgtcgtccag 10765753
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcgccgccgtcaccgtcgtccag 333 |||||||||| ||||||||||||| Sbjct: 130926 ctcgccgccgccaccgtcgtccag 130903
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 ctggagacgctgtgcgggcaggcg 408 ||||| |||||||||||||||||| Sbjct: 59667 ctggacacgctgtgcgggcaggcg 59690
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ctcgccgccgtcaccgtcgtccag 333 |||||||||| ||||||||||||| Sbjct: 32426 ctcgccgccgccaccgtcgtccag 32403
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 gcggcgccgccgcgctggcg 486 |||||||||||||||||||| Sbjct: 110709 gcggcgccgccgcgctggcg 110690
>gb|AC164977.2| Mus musculus BAC clone RP23-446B6 from chromosome 14, complete sequence Length = 179146 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gggcgcggggcaggtggaca 430 |||||||||||||||||||| Sbjct: 175625 gggcgcggggcaggtggaca 175606
>gb|AC018413.10| Homo sapiens chromosome 18, clone RP11-17M16, complete sequence Length = 112797 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gcgggcaggcggtgggcgcggggc 421 |||||| ||||||||||||||||| Sbjct: 72961 gcgggcgggcggtgggcgcggggc 72938 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,055,665 Number of Sequences: 3902068 Number of extensions: 4055665 Number of successful extensions: 98320 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91704 Number of HSP's gapped (non-prelim): 6612 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
