ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart15e09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 325 bits (164), Expect = 8e-86 Identities = 227/248 (91%) Strand = Plus / Minus Query: 251 ggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcg 310 ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||| Sbjct: 20461909 ggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtccaggccgccgtgctgtgcg 20461850 Query: 311 gccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcctct 370 |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 20461849 gccgccgccacggggtgcgcctccgcgtgcgcagcggcgggcacgactacgagggcctct 20461790 Query: 371 cgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccg 430 |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 20461789 cgtaccggtccgtgcgccaggaggtgttcgccgtggtcgacctcgccggcctccgctccg 20461730 Query: 431 tgcgcgtcgaccgggccgcgggcaccgcgtgggtggactcgggcgcgacggtcggggagc 490 |||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 20461729 tgcgcgtcaaccgccgcgcggccaccgcgtgggtggactccggcgcgacggtcggggaga 20461670 Query: 491 tgtactac 498 |||||||| Sbjct: 20461669 tgtactac 20461662 Score = 222 bits (112), Expect = 8e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 251 ggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcg 310 ||||| |||| ||| | ||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 20486381 ggccggtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctgcg 20486322 Query: 311 gccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcctct 370 ||||||| ||| ||| ||||||||| | ||||||||||| ||||||||||||||||||| Sbjct: 20486321 gccgccggaacggcgtccgcctccgcatccgcagcggcgggcacgactacgagggcctct 20486262 Query: 371 cgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccg 430 ||||| |||| ||||| || ||| |||||| ||| ||||||||| |||| ||||||||| Sbjct: 20486261 cgtacaggtcggagcggccggagacgttcgccgtgctcgacctcgtcaacatccgcgccg 20486202 Query: 431 tgcgcgtcgaccgggccgcgggcaccgcgtgggtggactcgggcgcgacggtcggggagc 490 | ||||||||| ||| | | |||||||||||||||||| ||||||||| |||||||| Sbjct: 20486201 tccgcgtcgacgcggcgtccgccaccgcgtgggtggactccggcgcgacgctcggggaga 20486142 Query: 491 tgtactac 498 |||||||| Sbjct: 20486141 tgtactac 20486134 Score = 200 bits (101), Expect = 3e-48 Identities = 221/259 (85%), Gaps = 9/259 (3%) Strand = Plus / Minus Query: 249 gaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctg 308 |||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||||| Sbjct: 20438097 gaggccgctctgcatcgtcacgccggccgacgcgtcgcacgtccaggccgccgtgctctg 20438038 Query: 309 cggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcct 368 ||||||| | | | ||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 20438037 cggccgcgccgagggggtgcgcctccgcgcgcgcagcggcgggcacgactacgagggcct 20437978 Query: 369 ctcgtaccggtccgagcgcc---ccgaggtgttcgcggtggtcgacct---cgccaacct 422 |||||||||||||| ||||| |||||||||||||||||||||||| ||||| || Sbjct: 20437977 ctcgtaccggtccgcgcgccgcggcgaggtgttcgcggtggtcgacctcggcgccaggct 20437918 Query: 423 ccgcgccgtgcgcgt---cgaccgggccgcgggcaccgcgtgggtggactcgggcgcgac 479 |||||||||| |||| || | ||| || | ||| ||||||||||| || |||||| | Sbjct: 20437917 ccgcgccgtgagcgtcagcggcgggggcgacgccacggcgtgggtggagtccggcgcgtc 20437858 Query: 480 ggtcggggagctgtactac 498 | ||||||||||||||||| Sbjct: 20437857 gctcggggagctgtactac 20437839 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 306 ctgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgaggg 365 |||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 20421550 ctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcggccacgactacgaggg 20421491 Query: 366 cctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaac 420 ||||||||||||||| ||| ||||||| |||||| | |||||||||| |||| Sbjct: 20421490 cctctcgtaccggtcggagatccccgagccgttcgccatcgtcgacctcgtcaac 20421436 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/136 (83%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 285 ccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcgtgcgcag 344 ||||| ||||||||| |||| |||||||| ||||||| || ||| |||||| |||||| Sbjct: 20389558 ccacgcccaggccgcggtgcggtgcggccggcgccacggggtccgcgtccgcgcgcgcag 20389499 Query: 345 cggcggacacgactacgagggcctctcgtaccggtc---cgagcgccccgaggtgttcgc 401 |||||| |||||||||||||||||||| |||| || ||| |||| |||| |||||| Sbjct: 20389498 cggcgggcacgactacgagggcctctcctacctctccctcgaccgccgcgagcggttcgc 20389439 Query: 402 ggtggtcgacctcgcc 417 |||| ||||||||||| Sbjct: 20389438 ggtgctcgacctcgcc 20389423 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 283 tcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcgtgcgc 342 |||||| ||||||||||||| ||||||||||||| || || ||| |||||| |||| Sbjct: 20466017 tcccacatccaggccgccgtcgtctgcggccgccggcatcgtgtccgcgtccgcgcgcgc 20465958 Query: 343 agcggcggacacgactacgagggcctctcgtaccg 377 |||||||| |||||||||||||| ||||||||||| Sbjct: 20465957 agcggcgggcacgactacgaggggctctcgtaccg 20465923 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 272 ccaccaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcc 331 ||||| |||| || ||||||||||||||||||| ||||||| | |||| | ||| | Sbjct: 20404836 ccaccgacgcctcgcacgtccaggccgccgtgcgctgcggcgtcggccatggcgtctccg 20404777 Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 ||||| ||||||||||| || |||||||||||||| || ||||| Sbjct: 20404776 tccgctcccgcagcggcgggcatgactacgagggcctgtcctaccg 20404731
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 325 bits (164), Expect = 8e-86 Identities = 227/248 (91%) Strand = Plus / Minus Query: 251 ggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcg 310 ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||| Sbjct: 34204 ggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtccaggccgccgtgctgtgcg 34145 Query: 311 gccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcctct 370 |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 34144 gccgccgccacggggtgcgcctccgcgtgcgcagcggcgggcacgactacgagggcctct 34085 Query: 371 cgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccg 430 |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 34084 cgtaccggtccgtgcgccaggaggtgttcgccgtggtcgacctcgccggcctccgctccg 34025 Query: 431 tgcgcgtcgaccgggccgcgggcaccgcgtgggtggactcgggcgcgacggtcggggagc 490 |||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 34024 tgcgcgtcaaccgccgcgcggccaccgcgtgggtggactccggcgcgacggtcggggaga 33965 Query: 491 tgtactac 498 |||||||| Sbjct: 33964 tgtactac 33957 Score = 222 bits (112), Expect = 8e-55 Identities = 214/248 (86%) Strand = Plus / Minus Query: 251 ggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcg 310 ||||| |||| ||| | ||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 58676 ggccggtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctgcg 58617 Query: 311 gccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcctct 370 ||||||| ||| ||| ||||||||| | ||||||||||| ||||||||||||||||||| Sbjct: 58616 gccgccggaacggcgtccgcctccgcatccgcagcggcgggcacgactacgagggcctct 58557 Query: 371 cgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccg 430 ||||| |||| ||||| || ||| |||||| ||| ||||||||| |||| ||||||||| Sbjct: 58556 cgtacaggtcggagcggccggagacgttcgccgtgctcgacctcgtcaacatccgcgccg 58497 Query: 431 tgcgcgtcgaccgggccgcgggcaccgcgtgggtggactcgggcgcgacggtcggggagc 490 | ||||||||| ||| | | |||||||||||||||||| ||||||||| |||||||| Sbjct: 58496 tccgcgtcgacgcggcgtccgccaccgcgtgggtggactccggcgcgacgctcggggaga 58437 Query: 491 tgtactac 498 |||||||| Sbjct: 58436 tgtactac 58429 Score = 200 bits (101), Expect = 3e-48 Identities = 221/259 (85%), Gaps = 9/259 (3%) Strand = Plus / Minus Query: 249 gaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctg 308 |||||||||||||||||| ||||| || ||||||| ||||||||||||||||||||||| Sbjct: 10392 gaggccgctctgcatcgtcacgccggccgacgcgtcgcacgtccaggccgccgtgctctg 10333 Query: 309 cggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcct 368 ||||||| | | | ||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 10332 cggccgcgccgagggggtgcgcctccgcgcgcgcagcggcgggcacgactacgagggcct 10273 Query: 369 ctcgtaccggtccgagcgcc---ccgaggtgttcgcggtggtcgacct---cgccaacct 422 |||||||||||||| ||||| |||||||||||||||||||||||| ||||| || Sbjct: 10272 ctcgtaccggtccgcgcgccgcggcgaggtgttcgcggtggtcgacctcggcgccaggct 10213 Query: 423 ccgcgccgtgcgcgt---cgaccgggccgcgggcaccgcgtgggtggactcgggcgcgac 479 |||||||||| |||| || | ||| || | ||| ||||||||||| || |||||| | Sbjct: 10212 ccgcgccgtgagcgtcagcggcgggggcgacgccacggcgtgggtggagtccggcgcgtc 10153 Query: 480 ggtcggggagctgtactac 498 | ||||||||||||||||| Sbjct: 10152 gctcggggagctgtactac 10134 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 283 tcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcgtgcgc 342 |||||| ||||||||||||| ||||||||||||| || || ||| |||||| |||| Sbjct: 38312 tcccacatccaggccgccgtcgtctgcggccgccggcatcgtgtccgcgtccgcgcgcgc 38253 Query: 343 agcggcggacacgactacgagggcctctcgtaccg 377 |||||||| |||||||||||||| ||||||||||| Sbjct: 38252 agcggcgggcacgactacgaggggctctcgtaccg 38218
>dbj|AK073505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H14, full insert sequence Length = 1813 Score = 325 bits (164), Expect = 8e-86 Identities = 227/248 (91%) Strand = Plus / Plus Query: 251 ggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcg 310 ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||| Sbjct: 278 ggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtccaggccgccgtgctgtgcg 337 Query: 311 gccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcctct 370 |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 338 gccgccgccacggggtgcgcctccgcgtgcgcagcggcgggcacgactacgagggcctct 397 Query: 371 cgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccg 430 |||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 398 cgtaccggtccgtgcgccaggaggtgttcgccgtggtcgacctcgccggcctccgctccg 457 Query: 431 tgcgcgtcgaccgggccgcgggcaccgcgtgggtggactcgggcgcgacggtcggggagc 490 |||||||| |||| ||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 458 tgcgcgtcaaccgccgcgcggccaccgcgtgggtggactccggcgcgacggtcggggaga 517 Query: 491 tgtactac 498 |||||||| Sbjct: 518 tgtactac 525
>dbj|AK109673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B05, full insert sequence Length = 1972 Score = 222 bits (112), Expect = 8e-55 Identities = 214/248 (86%) Strand = Plus / Plus Query: 251 ggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcg 310 ||||| |||| ||| | ||||| || ||||| |||||||||||||||||||||||||||| Sbjct: 291 ggccggtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctgcg 350 Query: 311 gccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggcctct 370 ||||||| ||| ||| ||||||||| | ||||||||||| ||||||||||||||||||| Sbjct: 351 gccgccggaacggcgtccgcctccgcatccgcagcggcgggcacgactacgagggcctct 410 Query: 371 cgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccg 430 ||||| |||| ||||| || ||| |||||| ||| ||||||||| |||| ||||||||| Sbjct: 411 cgtacaggtcggagcggccggagacgttcgccgtgctcgacctcgtcaacatccgcgccg 470 Query: 431 tgcgcgtcgaccgggccgcgggcaccgcgtgggtggactcgggcgcgacggtcggggagc 490 | ||||||||| ||| | | |||||||||||||||||| ||||||||| |||||||| Sbjct: 471 tccgcgtcgacgcggcgtccgccaccgcgtgggtggactccggcgcgacgctcggggaga 530 Query: 491 tgtactac 498 |||||||| Sbjct: 531 tgtactac 538
>gb|BT009387.1| Triticum aestivum clone wlm96.pk035.d7:fis, full insert mRNA sequence Length = 1805 Score = 172 bits (87), Expect = 7e-40 Identities = 270/331 (81%) Strand = Plus / Plus Query: 146 cgagcatccccagcgagcgcgtattgacgccgagttcgccgtcgttcacttccgtcctgg 205 ||||||||||| || ||| ||| || |||||||| ||||| |||||||| | | || Sbjct: 149 cgagcatcccccgccagctcgtgttcacgccgagctcgccctcgttcacgccgctgctca 208 Query: 206 tgtcgtccatccggaaccccaagttcttcaccccgacgactgtgaggccgctctgcatcg 265 ||| |||||||||||||||||||||||||| || | || ||||||||||| | ||| Sbjct: 209 agtcctccatccggaaccccaagttcttcacgcccagcaccgtgaggccgctgtatatca 268 Query: 266 tgacgcccaccaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacg 325 | ||||| || ||||| |||||||| |||||||||||||| ||||||||||| || Sbjct: 269 tcacgccgacgaacgcctcccacgtgcaggccgccgtgctgtgcggccgccggagcgggc 328 Query: 326 tgcgcctccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccggtccgagc 385 ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| || Sbjct: 329 tgcgcatccgcgtgcgcagcggcgggcacgactacgagggcctgtcgtaccggtccgtgc 388 Query: 386 gccccgaggtgttcgcggtggtcgacctcgccaacctccgcgccgtgcgcgtcgaccggg 445 || ||||| |||||| ||| | ||||| | | |||||| |||||||| |||||| | Sbjct: 389 gcgccgagtcgttcgccgtgcttgacctgtcgagcctccgtgccgtgcgggtcgacgcgc 448 Query: 446 ccgcgggcaccgcgtgggtggactcgggcgc 476 |||| ||||||||||||||||| ||||| Sbjct: 449 aggcggcgaccgcgtgggtggactccggcgc 479
>emb|AJ862831.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele B Length = 1644 Score = 167 bits (84), Expect = 4e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 247 gtgaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctc 306 |||| |||||||| |||| | || ||||||||||| |||||| ||||| |||| ||| | Sbjct: 220 gtgaagccgctctacatcatcacccccaccaacgcctcccacatccagtccgcggtggtg 279 Query: 307 tgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggc 366 ||||||||||| |||| ||| ||| |||||||||| |||||||| ||||||||||||||| Sbjct: 280 tgcggccgccggcacggcgtccgcatccgcgtgcggagcggcggccacgactacgagggc 339 Query: 367 ctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctc 414 || ||||||||||||||||||||||||| |||||| || ||||||||| Sbjct: 340 ctgtcgtaccggtccgagcgccccgaggcgttcgccgtcgtcgacctc 387
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 278 acgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcg 337 ||||||||||||||||||||||||||| ||||||| ||| || ||| |||||||||| Sbjct: 74481 acgcgtcccacgtccaggccgccgtgcggtgcggccaccggagcggcgtccgcctccgcg 74422 Query: 338 tgcgcagcggcggacacgactacgagggcctctcgtaccggtccgagcgccccgaggtgt 397 ||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| || Sbjct: 74421 tgcgcagcggcgggcacgactacgagggcctctcgtaccgcgccgtgcgcgccgagacgt 74362 Query: 398 tcgcggtggtcgacctcgccaacctccgcgccgtgcgcgtc 438 |||| ||| ||||||||||| |||||||||||||||||| Sbjct: 74361 tcgccgtgctcgacctcgccgggctccgcgccgtgcgcgtc 74321 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 457 gcgtgggtggactcgggcgcgacggtcggggagctgtactac 498 |||||||||||||| ||||| ||| |||||||||| |||||| Sbjct: 74302 gcgtgggtggactccggcgccacgctcggggagctctactac 74261
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 278 acgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcg 337 ||||||||||||||||||||||||||| ||||||| ||| || ||| |||||||||| Sbjct: 17006874 acgcgtcccacgtccaggccgccgtgcggtgcggccaccggagcggcgtccgcctccgcg 17006815 Query: 338 tgcgcagcggcggacacgactacgagggcctctcgtaccggtccgagcgccccgaggtgt 397 ||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| || Sbjct: 17006814 tgcgcagcggcgggcacgactacgagggcctctcgtaccgcgccgtgcgcgccgagacgt 17006755 Query: 398 tcgcggtggtcgacctcgccaacctccgcgccgtgcgcgtc 438 |||| ||| ||||||||||| |||||||||||||||||| Sbjct: 17006754 tcgccgtgctcgacctcgccgggctccgcgccgtgcgcgtc 17006714 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 457 gcgtgggtggactcgggcgcgacggtcggggagctgtactac 498 |||||||||||||| ||||| ||| |||||||||| |||||| Sbjct: 17006695 gcgtgggtggactccggcgccacgctcggggagctctactac 17006654
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 278 acgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcg 337 ||||||||||||||||||||||||||| ||||||| ||| || ||| |||||||||| Sbjct: 17101526 acgcgtcccacgtccaggccgccgtgcggtgcggccaccggagcggcgtccgcctccgcg 17101467 Query: 338 tgcgcagcggcggacacgactacgagggcctctcgtaccggtccgagcgccccgaggtgt 397 ||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||| || Sbjct: 17101466 tgcgcagcggcgggcacgactacgagggcctctcgtaccgcgccgtgcgcgccgagacgt 17101407 Query: 398 tcgcggtggtcgacctcgccaacctccgcgccgtgcgcgtc 438 |||| ||| ||||||||||| |||||||||||||||||| Sbjct: 17101406 tcgccgtgctcgacctcgccgggctccgcgccgtgcgcgtc 17101366 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 457 gcgtgggtggactcgggcgcgacggtcggggagctgtactac 498 |||||||||||||| ||||| ||| |||||||||| |||||| Sbjct: 17101347 gcgtgggtggactccggcgccacgctcggggagctctactac 17101306
>emb|AJ862834.1| Hordeum vulgare partial horv4 gene for pollen allergen Hor v 4 Length = 1608 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 247 gtgaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctc 306 |||| |||||||| |||| | || ||||||||| | |||||| ||||| | || ||| | Sbjct: 214 gtgaagccgctctacatcatcacccccaccaacacctcccacatccagtctgctgtggtg 273 Query: 307 tgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggc 366 ||||||||||| |||| ||| |||||||||||||| |||||||| ||||||||||||||| Sbjct: 274 tgcggccgccggcacggcgtccgcctccgcgtgcggagcggcggccacgactacgagggc 333 Query: 367 ctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctc 414 || ||||||||||||||||||||||||| |||||| || || |||||| Sbjct: 334 ctgtcgtaccggtccgagcgccccgaggcgttcgccgtcgtagacctc 381
>emb|AJ512487.2|PPR512487 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele A1 Length = 1567 Score = 149 bits (75), Expect = 1e-32 Identities = 144/167 (86%) Strand = Plus / Plus Query: 247 gtgaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctc 306 |||| |||| ||| |||||| || ||||||||||| |||||| ||||| |||||||| | Sbjct: 175 gtgaagccgatctacatcgtcacccccaccaacgcctcccacatccagtccgccgtggtg 234 Query: 307 tgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggc 366 ||||||||||| |||| || ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 235 tgcggccgccggcacggtgtccgcatccgcgtgcgcagcggcgggcacgactacgagggc 294 Query: 367 ctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacct 413 ||||||||||||||| || ||||||| |||||| || |||||||| Sbjct: 295 ctctcgtaccggtccctgcagcccgaggagttcgccgtcgtcgacct 341
>emb|AJ512488.2|PPR512488 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele B1 Length = 1580 Score = 139 bits (70), Expect = 1e-29 Identities = 118/134 (88%) Strand = Plus / Plus Query: 247 gtgaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctc 306 |||| |||||||| |||| | || |||||||||| |||||| ||||| |||||||| | Sbjct: 175 gtgaagccgctctacatcatcacccccaccaacgtctcccacatccagtccgccgtggtg 234 Query: 307 tgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggc 366 ||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 235 tgcggccgccgccacagcgtccgcatccgcgtgcgcagcggcgggcacgactacgagggc 294 Query: 367 ctctcgtaccggtc 380 |||||||||||||| Sbjct: 295 ctctcgtaccggtc 308
>gb|DQ251188.1| Phleum pratense major pollen allergen Phl p 4 precursor, mRNA, complete cds Length = 1741 Score = 139 bits (70), Expect = 1e-29 Identities = 118/134 (88%) Strand = Plus / Plus Query: 247 gtgaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctc 306 |||| |||||||| |||| | || |||||||||| |||||| ||||| |||||||| | Sbjct: 261 gtgaagccgctctacatcatcacccccaccaacgtctcccacatccagtccgccgtggtg 320 Query: 307 tgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggc 366 ||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 321 tgcggccgccgccacagcgtccgcatccgcgtgcgcagcggcgggcacgactacgagggc 380 Query: 367 ctctcgtaccggtc 380 |||||||||||||| Sbjct: 381 ctctcgtaccggtc 394
>emb|AJ862833.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele B Length = 1603 Score = 127 bits (64), Expect = 4e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 271 cccaccaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgc 330 ||||||||||| |||||| |||| |||| ||| | ||||||||||| |||| ||| ||| Sbjct: 235 cccaccaacgcctcccacatccaatccgcggtggtgtgcggccgccggcacggcgtccgc 294 Query: 331 ctccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccggtccgagcgcccc 390 ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| Sbjct: 295 ctccgcgtgcggagcggcggccacgactacgagggcctgtcgtaccggtccgagaaaccc 354 Query: 391 gaggtgttcgcggtggtcgacctc 414 ||| |||||| || ||||||||| Sbjct: 355 gagacgttcgccgtcgtcgacctc 378
>gb|AY451241.1| Cynodon dactylon FAD-linked oxidoreductase BG60 mRNA, complete cds Length = 1569 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 274 accaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctc 333 |||||||| |||||| |||||||||||||| | ||||||||||| |||| | ||||| || Sbjct: 259 accaacgcctcccacatccaggccgccgtggtgtgcggccgccggcacggcatgcgcatc 318 Query: 334 cgcgtgcgcagcggcggacacgactacgagggcctctcgtaccggtccgag 384 ||||||||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 319 cgcgtgcgcagtggcgggcacgactacgaggggctgtcgtaccggtccgag 369
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Minus Query: 306 ctgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgaggg 365 |||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 144945 ctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcggccacgactacgaggg 144886 Query: 366 cctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaac 420 ||||||||||||||| ||| ||||||| |||||| | |||||||||| |||| Sbjct: 144885 cctctcgtaccggtcggagatccccgagccgttcgccatcgtcgacctcgtcaac 144831 Score = 91.7 bits (46), Expect = 2e-15 Identities = 114/136 (83%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 285 ccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcctccgcgtgcgcag 344 ||||| ||||||||| |||| |||||||| ||||||| || ||| |||||| |||||| Sbjct: 112953 ccacgcccaggccgcggtgcggtgcggccggcgccacggggtccgcgtccgcgcgcgcag 112894 Query: 345 cggcggacacgactacgagggcctctcgtaccggtc---cgagcgccccgaggtgttcgc 401 |||||| |||||||||||||||||||| |||| || ||| |||| |||| |||||| Sbjct: 112893 cggcgggcacgactacgagggcctctcctacctctccctcgaccgccgcgagcggttcgc 112834 Query: 402 ggtggtcgacctcgcc 417 |||| ||||||||||| Sbjct: 112833 ggtgctcgacctcgcc 112818 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 272 ccaccaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcc 331 ||||| |||| || ||||||||||||||||||| ||||||| | |||| | ||| | Sbjct: 128231 ccaccgacgcctcgcacgtccaggccgccgtgcgctgcggcgtcggccatggcgtctccg 128172 Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 ||||| ||||||||||| || |||||||||||||| || ||||| Sbjct: 128171 tccgctcccgcagcggcgggcatgactacgagggcctgtcctaccg 128126
>dbj|AK072611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A01, full insert sequence Length = 2030 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 306 ctgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgaggg 365 |||||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 316 ctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcggccacgactacgaggg 375 Query: 366 cctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctcgccaac 420 ||||||||||||||| ||| ||||||| |||||| | |||||||||| |||| Sbjct: 376 cctctcgtaccggtcggagatccccgagccgttcgccatcgtcgacctcgtcaac 430
>emb|AJ862832.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele A Length = 1603 Score = 111 bits (56), Expect = 2e-21 Identities = 140/168 (83%) Strand = Plus / Plus Query: 247 gtgaggccgctctgcatcgtgacgcccaccaacgcgtcccacgtccaggccgccgtgctc 306 |||| |||||||| |||| | || ||||||||||| || ||| ||||| |||| ||| | Sbjct: 211 gtgaagccgctctacatcatcacccccaccaacgcctcgcacatccagtccgcggtggtg 270 Query: 307 tgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgactacgagggc 366 ||||| ||||| ||| ||| ||||||||||| || |||||||| ||||||||||||||| Sbjct: 271 tgcggacgccggcacagcgtccgcctccgcgtccggagcggcggccacgactacgagggc 330 Query: 367 ctctcgtaccggtccgagcgccccgaggtgttcgcggtggtcgacctc 414 || ||||||||||||||| |||||| |||||| || ||||||||| Sbjct: 331 ctgtcgtaccggtccgagaaacccgagacgttcgccgtcgtcgacctc 378
>emb|AJ862830.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele A Length = 1603 Score = 111 bits (56), Expect = 2e-21 Identities = 122/144 (84%) Strand = Plus / Plus Query: 271 cccaccaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgc 330 ||||||||||| || ||| ||||| |||| ||| | ||||||||||| |||| | | ||| Sbjct: 238 cccaccaacgcctcgcacatccagtccgcggtggtgtgcggccgccggcacggcatccgc 297 Query: 331 ctccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccggtccgagcgcccc 390 ||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||| ||| Sbjct: 298 ctccgcgtgcggagcggcggccacgactacgagggcctgtcgtaccggtctgagaaaccc 357 Query: 391 gaggtgttcgcggtggtcgacctc 414 ||| |||||| || ||||||||| Sbjct: 358 gagacgttcgccgtcgtcgacctc 381
>emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen allergen Lol p 4 Length = 1272 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 298 gccgtgctctgcggccgccgccacgacgtgcgcctccgcgtgcgcagcggcggacacgac 357 |||||| | ||||||||||| ||||||| ||| ||||||| ||||||||||| |||||| Sbjct: 2 gccgtggtgtgcggccgccgttacgacgtccgcatccgcgtacgcagcggcgggcacgac 61 Query: 358 tacgagggcctctcgtaccg 377 |||||||||||||||||||| Sbjct: 62 tacgagggcctctcgtaccg 81
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0008E07, complete sequence Length = 146679 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 106106 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtaccg 106151
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 12338628 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtaccg 12338673
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 7689749 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtaccg 7689794
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 26014 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtaccg 26059
>ref|NM_192799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3201 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtac 375 |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 2462 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtac 2419
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtac 375 |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 24483701 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtac 24483744 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| ||| |||||||||||||||||||||| Sbjct: 10209768 tccgcgcgcgcagcggcgggcacaactacgagggcctctcgtaccg 10209723
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtac 375 |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 64085 tccgcgcgcgcagcggcgggcacgactacgagggcctctcgtac 64128
>ref|XM_462837.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| ||| |||||||||||||||||||||| Sbjct: 674 tccgcgcgcgcagcggcgggcacaactacgagggcctctcgtaccg 719
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| ||| |||||||||||||||||||||| Sbjct: 75082 tccgcgcgcgcagcggcgggcacaactacgagggcctctcgtaccg 75037
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 |||||| |||||||||||| ||| |||||||||||||||||||||| Sbjct: 134367 tccgcgcgcgcagcggcgggcacaactacgagggcctctcgtaccg 134322
>ref|XM_481787.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1650 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 326 tgcgcctccgcgtgcgcagcggcggacacgactacgagggcctctcgtac 375 ||||| |||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 296 tgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtac 345
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 326 tgcgcctccgcgtgcgcagcggcggacacgactacgagggcctctcgtac 375 ||||| |||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 15504538 tgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtac 15504489
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 326 tgcgcctccgcgtgcgcagcggcggacacgactacgagggcctctcgtac 375 ||||| |||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 52296 tgcgcatccgcgtgcgcagcggcgcgcacagctacgagggcctctcgtac 52247
>dbj|AK105176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H12, full insert sequence Length = 1757 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 272 ccaccaacgcgtcccacgtccaggccgccgtgctctgcggccgccgccacgacgtgcgcc 331 ||||| |||| || ||||||||||||||||||| ||||||| | |||| | ||| | Sbjct: 300 ccaccgacgcctcgcacgtccaggccgccgtgcgctgcggcgtcggccatggcgtctccg 359 Query: 332 tccgcgtgcgcagcggcggacacgactacgagggcctctcgtaccg 377 ||||| ||||||||||| || |||||||||||||| || ||||| Sbjct: 360 tccgctcccgcagcggcgggcatgactacgagggcctgtcctaccg 405
>ref|XM_470576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 gccgtgcgcgtcgaccgggccg 448 |||||||||||||||||||||| Sbjct: 762 gccgtgcgcgtcgaccgggccg 783
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 gccgtgcgcgtcgaccgggccg 448 |||||||||||||||||||||| Sbjct: 4871130 gccgtgcgcgtcgaccgggccg 4871109 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ctctcgtcgagcatccccag 158 |||||||||||||||||||| Sbjct: 7037954 ctctcgtcgagcatccccag 7037973
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 gccgtgcgcgtcgaccgggccg 448 |||||||||||||||||||||| Sbjct: 124417 gccgtgcgcgtcgaccgggccg 124438
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 452 gcaccgcgtgggtggactcgggcgcg 477 |||||||||||||||| ||||||||| Sbjct: 1967410 gcaccgcgtgggtggattcgggcgcg 1967385
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 427 gccgtgcgcgtcgaccgggccg 448 |||||||||||||||||||||| Sbjct: 4870345 gccgtgcgcgtcgaccgggccg 4870324 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ctctcgtcgagcatccccag 158 |||||||||||||||||||| Sbjct: 7035849 ctctcgtcgagcatccccag 7035868
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 405 ggtcgacctcgccaacctccgcgccg 430 ||||||||||||||||| |||||||| Sbjct: 2041615 ggtcgacctcgccaaccgccgcgccg 2041590
>ref|NM_118200.1| Arabidopsis thaliana electron carrier/ oxidoreductase AT4G20820 mRNA, complete cds Length = 1599 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 agcggcggacacgactacgagggcctctc 371 ||||| |||||||||||||| |||||||| Sbjct: 340 agcggaggacacgactacgaaggcctctc 368
>gb|AC119431.13| Mus musculus chromosome 1, clone RP24-100O3, complete sequence Length = 205163 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 126 cttcctccagtgcctctcgtc 146 ||||||||||||||||||||| Sbjct: 100506 cttcctccagtgcctctcgtc 100486
>gb|AC121606.3| Mus musculus BAC clone RP23-314H5 from chromosome 1, complete sequence Length = 200095 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 cttcctccagtgcctctcgtc 146 ||||||||||||||||||||| Sbjct: 192374 cttcctccagtgcctctcgtc 192394
>emb|AL161553.2|ATCHRIV53 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 53 Length = 197568 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 agcggcggacacgactacgagggcctctc 371 ||||| |||||||||||||| |||||||| Sbjct: 154644 agcggaggacacgactacgaaggcctctc 154672
>emb|AL080254.1|ATF21C20 Arabidopsis thaliana DNA chromosome 4, BAC clone F21C20 (ESSA project) Length = 69563 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 agcggcggacacgactacgagggcctctc 371 ||||| |||||||||||||| |||||||| Sbjct: 59161 agcggaggacacgactacgaaggcctctc 59189
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 1.7 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Minus Query: 291 ccaggccgccgtg-ctctgcggccgccgccacg 322 ||||||||||||| | ||||||||||||||||| Sbjct: 533951 ccaggccgccgtggccctgcggccgccgccacg 533919
>emb|BX824406.1|CNS0A6Z0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH46ZH09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1614 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 343 agcggcggacacgactacgagggcctctc 371 ||||| |||||||||||||| |||||||| Sbjct: 1266 agcggaggacacgactacgaaggcctctc 1238
>gb|BC061776.1| Rattus norvegicus fucosyltransferase 4, mRNA (cDNA clone MGC:72456 IMAGE:5621698), complete cds Length = 4012 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cctccgcgccgtgcgcgtcg 439 |||||||||||||||||||| Sbjct: 495 cctccgcgccgtgcgcgtcg 476
>ref|NM_115082.2| Arabidopsis thaliana unknown protein AT3G52220 mRNA, complete cds Length = 1007 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gaggtgttcgcggtggtcga 410 |||||||||||||||||||| Sbjct: 95 gaggtgttcgcggtggtcga 114
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 agcgccccgaggtgttcgcggtggtcga 410 |||||| |||||||||||||||| |||| Sbjct: 4953291 agcgccgcgaggtgttcgcggtgctcga 4953264
>emb|AL135785.10| Human DNA sequence from clone RP11-113O24 on chromosome 9p11-13.3 Contains a novel gene, possible ortholog of mouse insulin-like growth factor binding protein 7 (IGFBP7), a novel gene similar to aldehyde dehydrogenase 1 family, member B1 (ALDH5, ALDHX, MGC2230) (ALDH1B1), a novel gene and four CpG islands, complete sequence Length = 166207 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 ccgggccgcgggcaccgcgtgggt 464 ||||||||||||||||||| |||| Sbjct: 12711 ccgggccgcgggcaccgcgcgggt 12734
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 cgcggtggtcgacctcgcca 418 |||||||||||||||||||| Sbjct: 46003 cgcggtggtcgacctcgcca 45984
>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15 Length = 77350 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gaggtgttcgcggtggtcga 410 |||||||||||||||||||| Sbjct: 24472 gaggtgttcgcggtggtcga 24453
>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15 Length = 123209 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gaggtgttcgcggtggtcga 410 |||||||||||||||||||| Sbjct: 119994 gaggtgttcgcggtggtcga 119975
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ctctcgtcgagcatccccag 158 |||||||||||||||||||| Sbjct: 44411 ctctcgtcgagcatccccag 44392
>gb|BT006279.1| Arabidopsis thaliana At3g52220 mRNA, complete cds Length = 714 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gaggtgttcgcggtggtcga 410 |||||||||||||||||||| Sbjct: 20 gaggtgttcgcggtggtcga 39
>gb|AF370547.1|AF370547 Arabidopsis thaliana putative protein (F4F15.330) mRNA, complete cds Length = 1005 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gaggtgttcgcggtggtcga 410 |||||||||||||||||||| Sbjct: 94 gaggtgttcgcggtggtcga 113
>gb|AY957485.1| Rhodococcus ruber cytochrome P450 monooxygenase gene, complete cds Length = 2454 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 tcgcggtggtcgacctcgcc 417 |||||||||||||||||||| Sbjct: 2301 tcgcggtggtcgacctcgcc 2282
>ref|NM_022219.2| Rattus norvegicus fucosyltransferase 4 (Fut4), mRNA Length = 4012 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cctccgcgccgtgcgcgtcg 439 |||||||||||||||||||| Sbjct: 495 cctccgcgccgtgcgcgtcg 476
>dbj|AK110049.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-C09, full insert sequence Length = 3547 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 gacctcgccaacctccgcgc 428 |||||||||||||||||||| Sbjct: 3411 gacctcgccaacctccgcgc 3392
>dbj|AB049938.1| Rattus norvegicus mRNA for alpha1,3-fucosyltransferase, complete cds Length = 1302 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cctccgcgccgtgcgcgtcg 439 |||||||||||||||||||| Sbjct: 140 cctccgcgccgtgcgcgtcg 121
>dbj|AB023642.1| Streptomyces griseus genes for negative regulator in initiation of differentiation, sigma factor of sigB family, DNA-binding protein, complete cds Length = 3613 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 ccgcgccgtgcgcgtcgaccgggc 446 ||||||||| |||||||||||||| Sbjct: 3274 ccgcgccgtccgcgtcgaccgggc 3251 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,433,296 Number of Sequences: 3902068 Number of extensions: 2433296 Number of successful extensions: 49832 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 49109 Number of HSP's gapped (non-prelim): 712 length of query: 498 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 476 effective length of database: 17,147,199,772 effective search space: 8162067091472 effective search space used: 8162067091472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
