ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart15d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non... 65 2e-10
2GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2... 43 5e-04
3GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1... 42 0.001
4TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 32 1.6
5TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 31 2.1
6TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo... 31 2.8
7TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloro... 30 6.2

>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green|
           plastid, chloroplast precursor (CTPT)
          Length = 402

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 35/98 (35%), Positives = 46/98 (46%)
 Frame = +2

Query: 275 TPSADEVAAGGGIAGTVQLGAMIVAWYLLNIYFNIYNKXXXXXXXXXXXYTITAFQLAFG 454
           T   +E    G +   ++LG +   WYL NIYFNIYNK            T+T  Q A G
Sbjct: 84  TAVPEEGEGSGKMTKVLELGLLFAMWYLFNIYFNIYNK--QVLKALHAPMTVTLVQFAVG 141

Query: 455 SLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTV 568
           S++I FMWA  L+  PK+S             H LG +
Sbjct: 142 SVLITFMWALNLYKRPKISAAQLAAILPLAVVHTLGNL 179



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>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast|
           precursor
          Length = 388

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 24/85 (28%), Positives = 35/85 (41%)
 Frame = +2

Query: 314 AGTVQLGAMIVAWYLLNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARLH 493
           A  +++G     W+ LN+ FNIYNK           +  +   LA GSL++   WA R+ 
Sbjct: 92  AQKLKIGIYFATWWALNVVFNIYNK--KVLNAFPYPWLTSTLSLACGSLMMLVSWATRIA 149

Query: 494 PVPKLSXXXXXXXXXXXXGHMLGTV 568
             PK               H +G V
Sbjct: 150 DAPKTDLEFWKTLFPVAVAHTIGHV 174



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>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast|
           precursor
          Length = 388

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
 Frame = +2

Query: 278 PSADEVAAG---GGIAGTVQLGAMIVAWYLLNIYFNIYNKXXXXXXXXXXXYTITAFQLA 448
           P  D+ AA       A  +++G     W+ LN+ FNIYNK           +  +   LA
Sbjct: 77  PIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNK--KVLNAYPYPWLTSTLSLA 134

Query: 449 FGSLVIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTV 568
            GSL++   WA  +   PK               H +G V
Sbjct: 135 AGSLMMLISWAVGIVETPKTDFDFWKTLFPVAVAHTIGHV 174



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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 23/96 (23%), Positives = 31/96 (32%)
 Frame = +2

Query: 281 SADEVAAGGGIAGTVQLGAMIVAWYLLNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSL 460
           S+ +   G     T+  G     WY LN+ FNI NK           Y ++   LA G +
Sbjct: 96  SSGDAKVGFFNKATLTTGFFFFMWYFLNVIFNILNK--KIYNYFPYPYFVSVIHLAVGVV 153

Query: 461 VIFFMWAARLHPVPKLSXXXXXXXXXXXXGHMLGTV 568
                W   L     +              H LG V
Sbjct: 154 YCLVSWGVGLPKRAPIDSTQLKLLTPVAFCHALGHV 189



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>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
 Frame = +2

Query: 272 LTPSADEVAAGGGIAGTVQLG-----------AMIVAWYLLNIYFNIYNKXXXXXXXXXX 418
           L P     A GG  AG  ++G            +++ WY LN+ FNI NK          
Sbjct: 75  LKPVRAASAEGGDSAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNK--KIYNYFPY 132

Query: 419 XYTITAFQLAFGSLVIFFMWAARL 490
            Y ++   L  G +     W+  L
Sbjct: 133 PYFVSVIHLFVGVVYCLVSWSVGL 156



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>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 18/53 (33%), Positives = 22/53 (41%)
 Frame = +2

Query: 332 GAMIVAWYLLNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARL 490
           G     WY LN+ FNI NK           Y ++A  LA G +     WA  L
Sbjct: 107 GFFFFMWYFLNVIFNILNK--KIYNYFPYPYFVSAIHLAVGVVYCLGGWAVGL 157



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>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E30)
          Length = 402

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +2

Query: 332 GAMIVAWYLLNIYFNIYNKXXXXXXXXXXXYTITAFQLAFGSLVIFFMWAARL 490
           G     WY LN+ FNI NK           Y ++   LA G +     W   L
Sbjct: 101 GFFFFTWYFLNVIFNILNK--KIYNYFPYPYFVSVIHLAVGVVYCLVSWTVGL 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.121    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,075,914
Number of Sequences: 219361
Number of extensions: 350027
Number of successful extensions: 607
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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