ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart15d04 |
|---|---|
| Clone Library Name | barley_pub |
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 97.4 bits (241), Expect = 3e-20 Identities = 46/63 (73%), Positives = 52/63 (82%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VAKEL+KYH QT G VIGG RR EAD+L KGVNLLVATPGRLLDHLQNTKGF+++ Sbjct: 176 QIFGVAKELLKYHHQTFGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFR 235 Query: 403 RLK 411 L+ Sbjct: 236 NLR 238
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 96.7 bits (239), Expect = 5e-20 Identities = 45/63 (71%), Positives = 54/63 (85%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+++HSQT G VIGG RR EA++LAKGVNLL+ATPGRLLDHLQNTKGF++K Sbjct: 126 QIFGVARELMEFHSQTFGIVIGGANRRQEAEKLAKGVNLLIATPGRLLDHLQNTKGFVFK 185 Query: 403 RLK 411 LK Sbjct: 186 NLK 188
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 95.9 bits (237), Expect = 8e-20 Identities = 45/63 (71%), Positives = 53/63 (84%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+++HSQT G VIGG RR EAD+L KGVN+L+ATPGRLLDHLQNTKGFI+K Sbjct: 121 QIFGVARELMEFHSQTFGIVIGGANRRQEADKLMKGVNILIATPGRLLDHLQNTKGFIFK 180 Query: 403 RLK 411 LK Sbjct: 181 NLK 183
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 94.0 bits (232), Expect = 3e-19 Identities = 45/63 (71%), Positives = 52/63 (82%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q V +EL+++HSQT G VIGG RR EA++L KGVNLLVATPGRLLDHLQNTKGFI+K Sbjct: 116 QIFGVVRELMEFHSQTFGIVIGGANRRQEAEKLMKGVNLLVATPGRLLDHLQNTKGFIFK 175 Query: 403 RLK 411 LK Sbjct: 176 NLK 178
>HAS1_YEAST (Q03532) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-) (Helicase| associated with SET1 protein 1) Length = 505 Score = 94.0 bits (232), Expect = 3e-19 Identities = 43/63 (68%), Positives = 53/63 (84%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+++HSQT G VIGG RR EA++L KGVN+L+ATPGRLLDHLQNTKGF++K Sbjct: 129 QIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFK 188 Query: 403 RLK 411 LK Sbjct: 189 NLK 191
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 94.0 bits (232), Expect = 3e-19 Identities = 44/63 (69%), Positives = 52/63 (82%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL +YHSQT G VIGG RR EA++L KGVNLL+ATPGRLLDHLQNT+GF++K Sbjct: 227 QIFGVARELCQYHSQTYGIVIGGANRRAEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFK 286 Query: 403 RLK 411 LK Sbjct: 287 NLK 289
>HAS1_CRYNE (Q5KMN6) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 607 Score = 92.0 bits (227), Expect = 1e-18 Identities = 43/63 (68%), Positives = 52/63 (82%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VAKEL++ HSQT G ++GG R+ EAD+L KGVNL+VATPGRLLDHLQNTKGF++K Sbjct: 216 QIFGVAKELMQGHSQTFGVLMGGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFK 275 Query: 403 RLK 411 LK Sbjct: 276 NLK 278
>HAS1_USTMA (Q4P6N0) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 517 Score = 90.9 bits (224), Expect = 3e-18 Identities = 42/63 (66%), Positives = 50/63 (79%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VAKEL+ +H QT G ++GG RR EAD+L KGVNL+VATPGRLLDHLQNTKGF++ Sbjct: 137 QIFGVAKELMAHHHQTFGIIMGGANRRAEADKLQKGVNLIVATPGRLLDHLQNTKGFVFS 196 Query: 403 RLK 411 LK Sbjct: 197 NLK 199
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 90.9 bits (224), Expect = 3e-18 Identities = 42/63 (66%), Positives = 52/63 (82%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+ +HSQT G VIGG RR EA++L KGVNLL+ATPGRLLDHLQNT+GF++K Sbjct: 191 QIFGVARELMAHHSQTFGIVIGGANRRQEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFK 250 Query: 403 RLK 411 +K Sbjct: 251 NVK 253
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 90.1 bits (222), Expect = 4e-18 Identities = 42/63 (66%), Positives = 52/63 (82%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q + VA++L+ HSQTLG VIGGN RR E ++L KGVNLLV TPGRLLDHLQN++GF++K Sbjct: 218 QIYGVARDLMANHSQTLGIVIGGNNRRQEEEKLNKGVNLLVCTPGRLLDHLQNSQGFVFK 277 Query: 403 RLK 411 LK Sbjct: 278 NLK 280
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 90.1 bits (222), Expect = 4e-18 Identities = 43/63 (68%), Positives = 50/63 (79%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+ HSQT G VIGG RR EA++L KGVNLL+ATPGRLLDHLQNT GF++K Sbjct: 215 QIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFK 274 Query: 403 RLK 411 LK Sbjct: 275 NLK 277
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 87.4 bits (215), Expect = 3e-17 Identities = 41/63 (65%), Positives = 50/63 (79%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q +EL+ +HSQT G VIGG RR EA++L KGVNLLVATPGRLLDHLQNT+GF++K Sbjct: 206 QIFGQVRELLAHHSQTYGIVIGGANRRAEAEKLMKGVNLLVATPGRLLDHLQNTQGFVFK 265 Query: 403 RLK 411 L+ Sbjct: 266 NLR 268
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 86.3 bits (212), Expect = 6e-17 Identities = 43/63 (68%), Positives = 51/63 (80%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+ +HSQT G VIGG RR EA++LAKGVNLL+ATPGRLLDHLQNT F++K Sbjct: 202 QIFGVARELMAHHSQTYGIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTP-FVFK 260 Query: 403 RLK 411 LK Sbjct: 261 NLK 263
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 83.6 bits (205), Expect = 4e-16 Identities = 41/63 (65%), Positives = 50/63 (79%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+K HSQT G VIGG RR EA++L KGVNLL+ATPGRLLDHLQNT F++K Sbjct: 194 QIFGVARELMKNHSQTYGVVIGGANRRAEAEKLGKGVNLLIATPGRLLDHLQNTP-FVFK 252 Query: 403 RLK 411 ++ Sbjct: 253 NMR 255
>HAS1_CANAL (Q5AK59) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 565 Score = 83.2 bits (204), Expect = 5e-16 Identities = 42/63 (66%), Positives = 51/63 (80%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q VA+EL+++HSQT G VIGG RR EA +LAKGVNLLVATPGRLLDHL+NT+ F++ Sbjct: 195 QIFGVARELMQFHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQ-FVFS 253 Query: 403 RLK 411 LK Sbjct: 254 NLK 256
>PIT_DROME (Q9VD51) Probable ATP-dependent RNA helicase pitchoune (EC 3.6.1.-)| Length = 680 Score = 81.3 bits (199), Expect = 2e-15 Identities = 36/63 (57%), Positives = 49/63 (77%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 QT V KEL+ +H T G V+GG+ R+ E+++L KG+N+LVATPGRLLDHLQN+ F+YK Sbjct: 274 QTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYK 333 Query: 403 RLK 411 L+ Sbjct: 334 NLQ 336
>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) (Myc-regulated DEAD box protein) (MrDb) Length = 670 Score = 80.5 bits (197), Expect = 3e-15 Identities = 35/63 (55%), Positives = 47/63 (74%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 QT V KEL+ +H T G ++GG+ R EA +L G+N++VATPGRLLDH+QNT GF+YK Sbjct: 266 QTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYK 325 Query: 403 RLK 411 L+ Sbjct: 326 NLQ 328
>DDX18_MOUSE (Q8K363) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) Length = 660 Score = 78.6 bits (192), Expect = 1e-14 Identities = 34/63 (53%), Positives = 46/63 (73%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 QT V KEL+ +H T G ++GG+ R E +L G+N++VATPGRLLDH+QNT GF+YK Sbjct: 256 QTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYK 315 Query: 403 RLK 411 L+ Sbjct: 316 NLQ 318
>PSA7_ORYSA (O04861) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit alpha-4) Length = 248 Score = 77.8 bits (190), Expect = 2e-14 Identities = 37/43 (86%), Positives = 41/43 (95%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKETIKLTIRALIE 131 T +AWKA+ATGRNSNSMREFLEKNYK+TSGKETIKL IRAL+E Sbjct: 153 TFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLE 195
>PSA7_LYCES (O24030) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit alpha-4) Length = 259 Score = 73.6 bits (179), Expect = 4e-13 Identities = 34/43 (79%), Positives = 40/43 (93%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKETIKLTIRALIE 131 T +AWKA+ATGRNSNS REFLEKNYK+TSG+ET+KL IRAL+E Sbjct: 154 TFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRALLE 196
>PSA7B_ARATH (O24616) Proteasome subunit alpha type 7-B (EC 3.4.25.1)| (Proteasome subunit alpha type 4) (20S proteasome alpha subunit D-2) (Proteasome component 6B) (Proteasome component 6C) Length = 250 Score = 73.2 bits (178), Expect = 5e-13 Identities = 34/43 (79%), Positives = 41/43 (95%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKETIKLTIRALIE 131 T +AWKA+ATGRNSNS+REFLEKNYK++SG+ETIKL IRAL+E Sbjct: 154 TFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLE 196
>PSA7_CICAR (Q9SXU1) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit alpha-4) Length = 249 Score = 72.8 bits (177), Expect = 7e-13 Identities = 33/43 (76%), Positives = 41/43 (95%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKETIKLTIRALIE 131 T +AWKA+ATGRNSNS+REFLEKN+K+TSG+ET+KL IRAL+E Sbjct: 154 TFSAWKANATGRNSNSIREFLEKNFKETSGQETVKLAIRALLE 196
>PSA7A_ARATH (P30186) Proteasome subunit alpha type 7-A (EC 3.4.25.1)| (Proteasome subunit alpha type 4) (20S proteasome alpha subunit D-1) (TAS-G64) (Proteasome component 6A) Length = 250 Score = 71.6 bits (174), Expect = 2e-12 Identities = 32/43 (74%), Positives = 41/43 (95%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKETIKLTIRALIE 131 T +AWKA+ATGRNSNS+REFLEKNYK+++G+ET+KL IRAL+E Sbjct: 154 TFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRALLE 196
>DBP7_DEBHA (Q6BKH3) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 798 Score = 58.2 bits (139), Expect = 2e-08 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Frame = +1 Query: 220 SQTHNVAKELVKYHSQTL-GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFI 396 +Q + V + LV+ H + G VIGG +++E +L KGVN+LVATPGRL DH++NT Sbjct: 252 TQIYGVLETLVRCHHHIVPGIVIGGEKKKSEKARLRKGVNILVATPGRLADHMENTTSLD 311 Query: 397 YKRLK 411 +L+ Sbjct: 312 VSQLR 316
>DBP7_CANAL (Q59S50) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 727 Score = 56.2 bits (134), Expect = 7e-08 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Frame = +1 Query: 220 SQTHNVAKELVKYHSQTL-GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFI 396 +Q + V + L + H + G VIGG +++E +L KG N+LVATPGRL DHL+NTK Sbjct: 226 TQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLENTKTLD 285 Query: 397 YKRLK 411 +L+ Sbjct: 286 ISQLR 290
>PSA7_DICDI (P34120) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| component DD5) Length = 250 Score = 54.7 bits (130), Expect = 2e-07 Identities = 25/41 (60%), Positives = 33/41 (80%) Frame = +3 Query: 9 TAWKAHATGRNSNSMREFLEKNYKDTSGKETIKLTIRALIE 131 ++WKA A GR+S S+ EFLEKNY D S +E+IKL +RAL+E Sbjct: 157 SSWKAAAIGRSSKSVGEFLEKNYTDVSEEESIKLAVRALLE 197
>DBP4_YARLI (Q6CGD1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 740 Score = 54.3 bits (129), Expect = 3e-07 Identities = 28/63 (44%), Positives = 39/63 (61%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q V +++ + HS + G VIGG EAD+LAK +N+L+ TPGRLL H+ T GF Sbjct: 126 QIFQVLRKIGRCHSFSAGLVIGGKDVAMEADRLAK-LNILICTPGRLLQHMDQTSGFDLS 184 Query: 403 RLK 411 +K Sbjct: 185 NVK 187
>DDX31_HUMAN (Q9H8H2) Probable ATP-dependent RNA helicase DDX31 (EC 3.6.1.-)| (DEAD box protein 31) (Helicain) Length = 851 Score = 54.3 bits (129), Expect = 3e-07 Identities = 24/64 (37%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTL-GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIY 399 Q+ + ++L+K + + G ++GG R++E +L KG+N+L++TPGRL+DH+++TK + Sbjct: 320 QSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHF 379 Query: 400 KRLK 411 RL+ Sbjct: 380 SRLR 383
>DBP7_ASPOR (Q2UE66) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 760 Score = 52.4 bits (124), Expect = 1e-06 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = +1 Query: 259 HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 H G VIGG +++E +L KG+N+LVATPGRL DHL+NT+ Sbjct: 253 HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQ 295
>DBP7_EMENI (Q5BGX6) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 778 Score = 52.4 bits (124), Expect = 1e-06 Identities = 24/43 (55%), Positives = 32/43 (74%) Frame = +1 Query: 259 HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 H G VIGG +++E +L KG+N+LVATPGRL DHL+NT+ Sbjct: 266 HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQ 308
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 52.0 bits (123), Expect = 1e-06 Identities = 24/44 (54%), Positives = 33/44 (75%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 V+GG T+A L+K +++VATPGRL+DHL+NTKGF + LK Sbjct: 166 VVGGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLK 209
>DBP7_NEUCR (Q7S873) ATP-dependent RNA helicase dbp-7 (EC 3.6.1.-)| Length = 814 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/36 (61%), Positives = 29/36 (80%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 VIGG +++E ++ KGVN+L+ATPGRL DHL NTK Sbjct: 265 VIGGESKKSEKARIRKGVNILIATPGRLTDHLDNTK 300
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 51.6 bits (122), Expect = 2e-06 Identities = 24/44 (54%), Positives = 32/44 (72%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG T+A L+K ++LV TPGRL+DHL+NTKGF K LK Sbjct: 148 IVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLK 191
>DBP7_ASPFU (Q4WV71) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 758 Score = 51.6 bits (122), Expect = 2e-06 Identities = 24/43 (55%), Positives = 31/43 (72%) Frame = +1 Query: 259 HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 H G VIGG +++E +L KG+N+LVATPGRL DHL NT+ Sbjct: 253 HWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLDNTQ 295
>DBP7_GIBZE (Q4HZ68) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 744 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVI-GGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 Q H V ++L++ + I GG ++ E ++ KGVN LVATPGRL DH+ NTK Sbjct: 244 QVHTVLEKLIRPFPWLVSTAITGGESKKAEKARIRKGVNFLVATPGRLADHIDNTK 299
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/57 (43%), Positives = 37/57 (64%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q V +++ + HS + G VIGG + EA++L + +N+LV TPGR+L HL T GF Sbjct: 144 QIFEVLRKIGRNHSFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQTAGF 199
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 50.4 bits (119), Expect = 4e-06 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + +++++ S ++GG +++ L+K +++VATPGRL+DHL Sbjct: 112 LAPTRELAYQISQQVTSLGSGIGVRTAVLVGGMDMMSQSIALSKRPHIIVATPGRLMDHL 171 Query: 376 QNTKGFIYKRLK 411 +NTKGF K LK Sbjct: 172 ENTKGFSLKSLK 183
>DBP7_YEAST (P36120) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-) (DEAD box| protein 7) Length = 742 Score = 50.4 bits (119), Expect = 4e-06 Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Frame = +1 Query: 220 SQTHNVAKELVKY-HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 SQ ++V LV H +IGG +++E +L KG N ++ TPGR+LDHLQNTK Sbjct: 235 SQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHLQNTK 291
>PSA7L_MOUSE (Q9CWH6) Proteasome subunit alpha type 7-like (EC 3.4.25.1)| Length = 250 Score = 50.4 bits (119), Expect = 4e-06 Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKD---TSGKETIKLTIRALIE 131 T AWKA+A GR++ ++REFLEKNY + ++ KE IKL I+AL+E Sbjct: 154 TYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLE 199
>DBP7_KLULA (Q6CK32) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 740 Score = 50.4 bits (119), Expect = 4e-06 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Frame = +1 Query: 220 SQTHNVAKELVKY-HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 +Q + V EL + H +IGG +++E +L KG N ++ TPGR+LDHLQNTK Sbjct: 239 NQIYQVTSELAQCCHFLVPCLLIGGERKKSEKARLRKGANFIIGTPGRVLDHLQNTK 295
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 50.1 bits (118), Expect = 5e-06 Identities = 21/44 (47%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A L + ++++ATPGRL+DHL+NTKGF K LK Sbjct: 175 IVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLKNLK 218
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 50.1 bits (118), Expect = 5e-06 Identities = 23/44 (52%), Positives = 32/44 (72%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A LA+ +++VATPGRL+DHL+NTKGF K LK Sbjct: 146 IVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALK 189
>PSA7_CARAU (Q9PTW9) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit alpha 4) Length = 251 Score = 49.7 bits (117), Expect = 6e-06 Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKD---TSGKETIKLTIRALIE 131 T AWKA+A GR++ ++REFLEKNY D S + IKL I+AL+E Sbjct: 154 TYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLE 199
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 49.7 bits (117), Expect = 6e-06 Identities = 20/44 (45%), Positives = 32/44 (72%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A L + ++++ATPGRL+DHL+NTKGF ++LK Sbjct: 183 IVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLK 226
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 49.3 bits (116), Expect = 8e-06 Identities = 20/44 (45%), Positives = 32/44 (72%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A L + ++++ATPGRL+DHL+NTKGF ++LK Sbjct: 169 IVGGMSMMDQARDLMRKPHIIIATPGRLMDHLENTKGFNLRKLK 212
>PSA7L_HUMAN (Q8TAA3) Proteasome subunit alpha type 7-like (EC 3.4.25.1)| Length = 256 Score = 49.3 bits (116), Expect = 8e-06 Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKD---TSGKETIKLTIRALIE 131 T AWKA+A GR++ ++REFLEKNY + S E IKL I+AL+E Sbjct: 160 TYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLE 205
>DBP7_SCHPO (O60173) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 709 Score = 49.3 bits (116), Expect = 8e-06 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 3/58 (5%) Frame = +1 Query: 223 QTHNVAKELVKY---HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 Q +NVA +L H VIGG +++E ++ KGVN+L+ TPGRL DHL+NT+ Sbjct: 231 QIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIGTPGRLADHLENTE 288
>DBP7_ASHGO (Q754J2) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 710 Score = 49.3 bits (116), Expect = 8e-06 Identities = 20/36 (55%), Positives = 28/36 (77%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 ++GG +++E +L KG N +V TPGR+LDHLQNTK Sbjct: 245 LVGGERKKSEKARLRKGANFIVGTPGRMLDHLQNTK 280
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/44 (50%), Positives = 32/44 (72%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +++ L K +++VATPGRLLDHL+NTKGF + LK Sbjct: 154 IVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLK 197
>PSA7_RAT (P48004) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit RC6-1) Length = 254 Score = 48.9 bits (115), Expect = 1e-05 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE---TIKLTIRALIE 131 T AWKA+A GR + S+REFLEKNY D + + TIKL I+AL+E Sbjct: 158 TYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLE 203
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 48.9 bits (115), Expect = 1e-05 Identities = 22/44 (50%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG ++ L K +++VATPGRLLDHL+NTKGF + LK Sbjct: 148 IVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLK 191
>PSA7_MOUSE (Q9Z2U0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit RC6-1) Length = 248 Score = 48.9 bits (115), Expect = 1e-05 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE---TIKLTIRALIE 131 T AWKA+A GR + S+REFLEKNY D + + TIKL I+AL+E Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLE 197
>PSA7_HUMAN (O14818) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit RC6-1) (Proteasome subunit XAPC7) Length = 248 Score = 48.9 bits (115), Expect = 1e-05 Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE---TIKLTIRALIE 131 T AWKA+A GR + S+REFLEKNY D + + TIKL I+AL+E Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLE 197
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 48.9 bits (115), Expect = 1e-05 Identities = 21/44 (47%), Positives = 33/44 (75%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +++ LAK ++++ATPGRL+DHL+NTKGF + LK Sbjct: 126 IVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALK 169
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Frame = +1 Query: 175 RSVPSSDPP*LAPRGS---QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLV 345 R VP+S L P Q +NVA +L Y T ++GG R + + L K ++++ Sbjct: 369 RKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENILKKRPDVII 428 Query: 346 ATPGRLLDHLQNTKGFIYKRLK 411 ATPGR +DH++N+ F L+ Sbjct: 429 ATPGRFIDHMRNSASFTVDTLE 450
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/59 (38%), Positives = 35/59 (59%) Frame = +1 Query: 217 GSQTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 G Q H+V K+L ++ S T +GG +++ L ++L+ATPGRL+DHL N F Sbjct: 268 GIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSF 326
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 48.5 bits (114), Expect = 1e-05 Identities = 21/44 (47%), Positives = 33/44 (75%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +++ LAK ++++ATPGRL+DHL+NTKGF + LK Sbjct: 126 IVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALK 169
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 48.5 bits (114), Expect = 1e-05 Identities = 22/44 (50%), Positives = 32/44 (72%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +++ L K +++VATPGRLLDHL+NTKGF + LK Sbjct: 154 LVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLK 197
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/57 (40%), Positives = 36/57 (63%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q V +++ +YH+ + G VIGG + E ++L + +N+LV TPGR+L HL T F Sbjct: 135 QIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQTAFF 190
>DDX10_HUMAN (Q13206) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 48.1 bits (113), Expect = 2e-05 Identities = 23/57 (40%), Positives = 35/57 (61%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 QT V +++ K H + G +IGG + EA+++ +N+LV TPGRLL H+ T F Sbjct: 156 QTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDETVSF 211
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 48.1 bits (113), Expect = 2e-05 Identities = 21/44 (47%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A L + ++LVATPGR++DHL++TKGF K LK Sbjct: 167 IVGGMDMMDQARDLMRKPHILVATPGRIMDHLEHTKGFSLKNLK 210
>DBP4_GIBZE (Q4IAS1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 793 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = +1 Query: 220 SQTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 +Q V +++ HS + G VIGG + EA++L + +N+LV TPGR+L H T GF Sbjct: 137 AQIFEVLRKVGTKHSFSAGLVIGGKSLKEEAERLDR-MNILVCTPGRMLQHFDQTAGF 193
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 47.8 bits (112), Expect = 2e-05 Identities = 22/57 (38%), Positives = 36/57 (63%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q V +++ +YH+ + G +IGG + E ++L + +N+LV TPGR+L HL T F Sbjct: 132 QIFEVLRKIGRYHTFSAGLIIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQTAMF 187
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/57 (40%), Positives = 36/57 (63%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q V +++ +YH+ + G VIGG + E ++L + +N+LV TPGR+L HL T F Sbjct: 134 QIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQTALF 189
>DBP7_CANGA (Q8TFL3) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 715 Score = 47.4 bits (111), Expect = 3e-05 Identities = 19/36 (52%), Positives = 27/36 (75%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 +IGG +++E +L KG N ++ TPGR+LDH QNTK Sbjct: 238 LIGGERKKSEKARLRKGCNFIIGTPGRILDHFQNTK 273
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 47.0 bits (110), Expect = 4e-05 Identities = 19/63 (30%), Positives = 39/63 (61%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYK 402 Q H+VA ++ + + IGG + + +L K ++++ATPGR +DH++N++GF + Sbjct: 345 QCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVE 404 Query: 403 RLK 411 ++ Sbjct: 405 NIE 407
>PSA7B_XENLA (Q9PVQ1) Proteasome subunit alpha type 7-B (EC 3.4.25.1)| (Proteasome subunit alpha 4-B) Length = 247 Score = 47.0 bits (110), Expect = 4e-05 Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE---TIKLTIRALIE 131 T AWKA+A GR + S+REFLEK+Y D + + TIKL I+AL+E Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLE 197
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 47.0 bits (110), Expect = 4e-05 Identities = 20/44 (45%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A L + +++VATPGR++DHL++TKGF K LK Sbjct: 85 IVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLK 128
>PSA7A_XENLA (Q9PVY6) Proteasome subunit alpha type 7-A (EC 3.4.25.1)| (Proteasome subunit alpha 4-A) Length = 248 Score = 47.0 bits (110), Expect = 4e-05 Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE---TIKLTIRALIE 131 T AWKA+A GR + S+REFLEK+Y D + + TIKL I+AL+E Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLE 197
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 47.0 bits (110), Expect = 4e-05 Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP + ++++ V+ T+G ++GG +++ L+K +++VATPGRL DH Sbjct: 178 LAPTRELAYQISQQ-VEALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVATPGRLQDH 236 Query: 373 LQNTKGFIYKRLK 411 L+NTKGF + L+ Sbjct: 237 LENTKGFSLRGLQ 249
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Frame = +1 Query: 175 RSVPSSDPP*LAPRGS---QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLV 345 R VP+S L P Q +NVA +L + T ++GG R + + L K ++++ Sbjct: 377 RKVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQLVGGFSLREQENILKKRPDVII 436 Query: 346 ATPGRLLDHLQNTKGFIYKRLK 411 ATPGR +DH++N+ F L+ Sbjct: 437 ATPGRFIDHMRNSPSFTVDTLE 458
>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 735 Score = 46.6 bits (109), Expect = 5e-05 Identities = 22/57 (38%), Positives = 35/57 (61%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 QT ++ + HS + G +IGGN + E ++L++ +N+LV TPGRLL H+ F Sbjct: 126 QTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSR-MNILVCTPGRLLQHIDQAVNF 181
>DDX10_MOUSE (Q80Y44) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 46.6 bits (109), Expect = 5e-05 Identities = 22/54 (40%), Positives = 34/54 (62%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 QT V +++ K H + G +IGG + EA+++ +N+LV TPGRLL H+ T Sbjct: 156 QTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDET 208
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 46.6 bits (109), Expect = 5e-05 Identities = 21/59 (35%), Positives = 35/59 (59%) Frame = +1 Query: 217 GSQTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 G Q H+V ++L ++ + T +GG +++ L ++L+ATPGRL+DHL N F Sbjct: 302 GIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSF 360
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 46.2 bits (108), Expect = 7e-05 Identities = 21/44 (47%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG T+A L K +++VATPGRLLDHL+ TKGF + ++ Sbjct: 192 ILGGMDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQ 235
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/44 (47%), Positives = 30/44 (68%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A L K +++VATPGRL+DHL+ TKGF + LK Sbjct: 162 IVGGLDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLK 205
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 45.1 bits (105), Expect = 2e-04 Identities = 22/56 (39%), Positives = 36/56 (64%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 Q + V ++ KY S + G VIGG + E ++++K +N+L+ TPGRLL H+ + G Sbjct: 128 QIYEVLVKIGKYMSFSAGLVIGGKDVKFEMERVSK-INILIGTPGRLLQHMDQSVG 182
>PSA7_YEAST (P40303) Proteasome component PRE6 (EC 3.4.25.1) (Macropain subunit| PRE6) (Proteinase YSCE subunit PRE6) (Multicatalytic endopeptidase complex subunit PRE6) Length = 254 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 4/45 (8%) Frame = +3 Query: 9 TAWKAHATGRNSNSMREFLEKNY----KDTSGKETIKLTIRALIE 131 ++W A GRNS ++REFLEKNY + +E +KLT+R+L+E Sbjct: 157 SSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLE 201
>PSA7_SCHPO (Q10329) Probable proteasome subunit alpha type 7 (EC 3.4.25.1)| Length = 259 Score = 42.7 bits (99), Expect = 8e-04 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = +3 Query: 12 AWKAHATGRNSNSMREFLEKNYKD-TSGKETIKLTIRALIE 131 AWKA A GR S + RE+LEKN+K+ S ETI L + +L+E Sbjct: 157 AWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLE 197
>DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 613 Score = 42.7 bits (99), Expect = 8e-04 Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKY-HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q + K+L + ++ +G +GG R + +QL ++++ATPGRL+DH++N+ F Sbjct: 214 QVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSF 271
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q +V K++ ++ S T G +GG R + L ++++ATPGR +DH++N+ F Sbjct: 317 QVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASF 374
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 42.4 bits (98), Expect = 0.001 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q +V K+L K+ S T G +GG R + L ++++ATPGR++DH++N+ F Sbjct: 305 QVADVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRPDIVIATPGRIIDHIRNSASF 362
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 42.0 bits (97), Expect = 0.001 Identities = 19/57 (33%), Positives = 35/57 (61%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q + V ++ K+ + + G VIGG E +++++ +N+L+ TPGR+L H+ GF Sbjct: 128 QIYEVLSKIGKHTTFSAGLVIGGKDVTFEKERISR-INILIGTPGRILQHMDQAVGF 183
>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 771 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKY-HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q +V K++ ++ ++ G +GG R + QL ++++ATPGRL+DH++N+ F Sbjct: 344 QVCDVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSF 401
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKY-HSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q +V K + K+ + T G +GG R + L ++++ATPGR +DHL+N+ F Sbjct: 319 QVADVGKNIGKFVNGLTFGLAVGGLNLRQQEQALKTRPDIVIATPGRFIDHLRNSASF 376
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKYHSQT-LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q +V K+L +Y S G +GG R + +L +++ATPGR +DH++N+ F Sbjct: 338 QVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQELKTRPEVVIATPGRFIDHVRNSPSF 395
>PSA7_CHICK (O13268) Proteasome subunit alpha type 7 (EC 3.4.25.1) (GPRO-28)| Length = 249 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE---TIKLTIRALIE 131 T AWKA+A GR + S+R EKNY D + + TIKL I+AL+E Sbjct: 152 TYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLE 197
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 40.8 bits (94), Expect = 0.003 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = +1 Query: 223 QTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q +V K++ ++ S T G +GG R + L ++++ATPGR +DH++N+ F Sbjct: 292 QVADVGKKIGQFVSNLTFGLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASF 349
>PSA72_DROME (Q24178) Proteasome subunit alpha type 7-1A (EC 3.4.25.1)| (Testis-specific proteasome 28 kDa subunit 1A) (Testis-specific alpha4-t1 proteasome subunit) Length = 249 Score = 40.8 bits (94), Expect = 0.003 Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYKD---TSGKETIKLTIRALIE 131 +KA ATGR +N++REF EK Y D T+ + IKL +RAL+E Sbjct: 158 YKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLE 199
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 Q + V ++ + S + G VIGG + E +++++ +N+L+ TPGR+L HL G Sbjct: 128 QIYEVLTKIGSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVG 182
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 ++P + + LVK S T G VIGG E +++AK +N+L+ TPGR+L H+ Sbjct: 119 ISPTRELAMQIYEVLVKIGSHTQFSAGLVIGGKDVNFELERIAK-INILIGTPGRILQHM 177 Query: 376 QNTKG 390 G Sbjct: 178 DQAVG 182
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 40.4 bits (93), Expect = 0.004 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQN 381 LAP + VAK+ + ++ GG +++ +Q+ G+++LV TPGR+ DHLQ+ Sbjct: 214 LAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINQIRNGIDILVGTPGRIKDHLQS 273
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP + +E +K+ + LG VIGG R + +L G +++ATPGRL+D Sbjct: 474 LAPTRELAQQIEEETIKF-GKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDV 532 Query: 373 LQN 381 L+N Sbjct: 533 LEN 535
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 40.0 bits (92), Expect = 0.005 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP + +E +K+ + LG VIGG R + +L G +++ATPGRL+D Sbjct: 474 LAPTRELAQQIEEETIKF-GKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDV 532 Query: 373 LQN 381 L+N Sbjct: 533 LEN 535
>PSA7_TRYBB (Q9NDA2) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S| proteasome subunit alpha-4) Length = 247 Score = 39.7 bits (91), Expect = 0.007 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKDTSGKE-TIKLTIRALIE 131 T +AW A A GRN + EF+EKNY+D ++ + I+AL+E Sbjct: 152 TSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLE 195
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 39.7 bits (91), Expect = 0.007 Identities = 17/57 (29%), Positives = 33/57 (57%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGF 393 Q ++V K + K+ +GG +++ +L +++ATPGRL+DH++N+ F Sbjct: 423 QCYSVGKSIAKFTDIRFCLCVGGLSVKSQEAELKLRPEVVIATPGRLIDHVRNSASF 479
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 38.9 bits (89), Expect = 0.011 Identities = 24/82 (29%), Positives = 42/82 (51%) Frame = +1 Query: 148 IDTTAVVLLRSVPSSDPP*LAPRGSQTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAK 327 I TT VV+L +P+ + Q H VA +L + +GG + + +L Sbjct: 325 IPTTRVVVL--LPTRE------LAIQCHAVATKLAAFTDIKFTLAVGGLSLKAQELELKL 376 Query: 328 GVNLLVATPGRLLDHLQNTKGF 393 ++++ATPGR +DH++N+ F Sbjct: 377 RPDVIIATPGRFIDHMRNSASF 398
>PSA71_DROME (P22769) Proteasome subunit alpha type 7-1 (EC 3.4.25.1)| (Proteasome 28 kDa subunit 1) (PROS-Dm28.1) Length = 249 Score = 38.9 bits (89), Expect = 0.011 Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 3/42 (7%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYKD---TSGKETIKLTIRALIE 131 +KA+ATGR++ +REF EK+Y++ + +KL IRAL+E Sbjct: 158 YKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLE 199
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 38.5 bits (88), Expect = 0.015 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQN 381 LAP + VAK+ + ++ GG +++ + + G+++LV TPGR+ DHLQ+ Sbjct: 217 LAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQS 276
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 38.5 bits (88), Expect = 0.015 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRL 408 ++GG +A L ++L+ATPGRL+DHL NT F L Sbjct: 331 LVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSAL 373
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 38.5 bits (88), Expect = 0.015 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQN 381 LAP + V+K+ + ++ GG + +++ G+++LV TPGR+ DHLQN Sbjct: 338 LAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQN 397 Query: 382 TK 387 K Sbjct: 398 GK 399
>PSA71_DROVI (O16811) Proteasome subunit alpha type 7-1 (EC 3.4.25.1)| (Proteasome 28 kDa subunit 1) Length = 247 Score = 38.1 bits (87), Expect = 0.019 Identities = 18/42 (42%), Positives = 31/42 (73%), Gaps = 3/42 (7%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYKD---TSGKETIKLTIRALIE 131 +KA+ATG ++ ++REF EK Y++ ++ + +KL IRAL+E Sbjct: 156 YKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRALLE 197
>DBP8_GIBZE (Q4I662) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 547 Score = 38.1 bits (87), Expect = 0.019 Identities = 15/35 (42%), Positives = 26/35 (74%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 V GG+ RT+A ++ K ++++ATPGRL DH++ + Sbjct: 218 VTGGSDMRTQAIEIGKRPHVIIATPGRLADHIRTS 252
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 38.1 bits (87), Expect = 0.019 Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP + E K+ ++ LG+ V+GG+ ++ Q+++G +++VATPGRLLD Sbjct: 331 LAPTRELAQQIQVEGNKF-AEPLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDC 389 Query: 373 LQ 378 L+ Sbjct: 390 LE 391
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 38.1 bits (87), Expect = 0.019 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI--GGNGRRTEADQLAKGVNLLVATPGRLLD--- 369 L P V E KY + L V GG R + ++L KGV++++ATPGRL D Sbjct: 322 LTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQM 381 Query: 370 -HLQNTKGFIYKRLKE 414 + N K Y L E Sbjct: 382 SNFVNLKNITYLVLDE 397
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 38.1 bits (87), Expect = 0.019 Identities = 15/44 (34%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A +L++ ++++ATPGRL DHL+++ F K+++ Sbjct: 104 IVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIR 147
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 37.7 bits (86), Expect = 0.025 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 9/68 (13%) Frame = +1 Query: 205 LAPRGSQTHNVAKE---LVKYHSQTLGY------VIGGNGRRTEADQLAKGVNLLVATPG 357 LAP + KE + K S+ Y ++GG+ + L++G ++LVATPG Sbjct: 260 LAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPG 319 Query: 358 RLLDHLQN 381 RL+D L+N Sbjct: 320 RLIDSLEN 327
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 37.7 bits (86), Expect = 0.025 Identities = 18/36 (50%), Positives = 25/36 (69%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG R + LA+GV +++ATPGRLLD L++ K Sbjct: 223 VYGGVPRGQQIRDLARGVEIVIATPGRLLDMLESGK 258
>DBP4_CANAL (Q5AF95) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 37.7 bits (86), Expect = 0.025 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 Q V ++ KY++ + G V GG + E +++++ +N+LV TPGR+ HL G Sbjct: 135 QIFEVLTKIGKYNTFSAGLVTGGKDVQFEKERVSR-MNILVGTPGRISQHLNEAVG 189
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 37.4 bits (85), Expect = 0.033 Identities = 15/44 (34%), Positives = 31/44 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 ++GG +A +L++ ++++ATPGRL DHL+++ F K+++ Sbjct: 104 IVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQ 147
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 37.4 bits (85), Expect = 0.033 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 + P + KE K+ S+TLG V GG G + +L +G ++V TPGR++D Sbjct: 451 MTPTRELALQITKECKKF-SKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509 Query: 373 LQNTKG 390 L G Sbjct: 510 LAANSG 515
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 37.4 bits (85), Expect = 0.033 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 + P + KE K+ S+TLG V GG G + +L +G ++V TPGR++D Sbjct: 451 MTPTRELALQITKECKKF-SKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509 Query: 373 LQNTKG 390 L G Sbjct: 510 LAANSG 515
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 37.4 bits (85), Expect = 0.033 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 + P + KE K+ S+TLG V GG G + +L +G ++V TPGR++D Sbjct: 451 MTPTRELALQITKECKKF-SKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509 Query: 373 LQNTKG 390 L G Sbjct: 510 LAANSG 515
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 37.4 bits (85), Expect = 0.033 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 + P + KE K+ S+TLG V GG G + +L +G ++V TPGR++D Sbjct: 451 MTPTRELALQITKECKKF-SKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509 Query: 373 LQNTKG 390 L G Sbjct: 510 LAANSG 515
>DBP4_DEBHA (Q6BXG0) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 766 Score = 37.4 bits (85), Expect = 0.033 Identities = 19/56 (33%), Positives = 34/56 (60%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 Q V ++ K+++ + G V GG + E ++++K +N+LV TPGR+ HL + G Sbjct: 133 QIFEVLVKIGKHNNFSAGLVTGGKDVKYEKERVSK-MNILVGTPGRISQHLNESVG 187
>DBP73_DROME (P26802) Probable ATP-dependent RNA helicase Dbp73D (EC 3.6.1.-)| (DEAD box protein 73D) Length = 687 Score = 37.4 bits (85), Expect = 0.033 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +1 Query: 334 NLLVATPGRLLDHLQNTKGFIYKRLK 411 +++V TPGRL+DHL TKGF K LK Sbjct: 275 DIVVTTPGRLVDHLHATKGFCLKSLK 300
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 37.4 bits (85), Expect = 0.033 Identities = 18/54 (33%), Positives = 30/54 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 Q N A++ +G V GG R + + + +G ++++ATPGRLLD + T Sbjct: 333 QIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRT 386
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 37.4 bits (85), Expect = 0.033 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQ-TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQN 381 LAP + V+K+ + ++ GG + +++ G+++LV TPGR+ DH+QN Sbjct: 266 LAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQN 325 Query: 382 TK 387 K Sbjct: 326 GK 327
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 37.0 bits (84), Expect = 0.043 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI--GGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 L P +V E KY + L + GG R + + ++KGV++++ATPGRL D Sbjct: 302 LTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQM 361 Query: 379 N 381 N Sbjct: 362 N 362
>RHLB_YERPS (Q66G19) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 37.0 bits (84), Expect = 0.043 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H+ A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 99 QIHSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 148
>RHLB_YERPE (Q8ZAD8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 37.0 bits (84), Expect = 0.043 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H+ A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 99 QIHSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 148
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 37.0 bits (84), Expect = 0.043 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = +1 Query: 232 NVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 N +K+L+ H L GG + L KG ++V TPGRLLDHL+ Sbjct: 96 NFSKKLIGVHVLAL---YGGQRYDLQLKSLRKGPQIIVGTPGRLLDHLK 141
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 36.6 bits (83), Expect = 0.056 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQ---TLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + E K+ + T+ ++GG+ +A L G ++VATPGRL+D L Sbjct: 375 LAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCL 434 Query: 376 Q 378 + Sbjct: 435 E 435
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 36.6 bits (83), Expect = 0.056 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + K+ VK+ + V GG + + L +GV++++ATPGRL+D++ Sbjct: 90 LAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYV 149 Query: 376 QNTK 387 + K Sbjct: 150 KQHK 153
>DBP8_EMENI (Q5B3H7) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 525 Score = 36.6 bits (83), Expect = 0.056 Identities = 18/37 (48%), Positives = 26/37 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 + GG R++A +LA +++VATPGRL DH+ NT G Sbjct: 197 ITGGTDMRSQAIELAGRPHVVVATPGRLADHI-NTSG 232
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 36.6 bits (83), Expect = 0.056 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 LAP + E VK+ + LG+ V+GG + +A + +G L+VATPGRLLD Sbjct: 245 LAPTRELAMQIKDEAVKFCAP-LGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLD 302
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 36.6 bits (83), Expect = 0.056 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + K+ VK+ + V GG + + L +GV++++ATPGRL+D++ Sbjct: 90 LAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYV 149 Query: 376 QNTK 387 + K Sbjct: 150 KQHK 153
>DBP8_NEUCR (Q7RYZ7) ATP-dependent RNA helicase dbp-8 (EC 3.6.1.-)| Length = 626 Score = 36.6 bits (83), Expect = 0.056 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 + GG R +A LAK +L++ATPGRL DH++ + Sbjct: 297 ITGGADMRKQAIDLAKRPHLVIATPGRLADHIRTS 331
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 36.6 bits (83), Expect = 0.056 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + K+ VK+ + V GG + + L +GV++++ATPGRL+D++ Sbjct: 90 LAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYV 149 Query: 376 QNTK 387 + K Sbjct: 150 KQHK 153
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 36.6 bits (83), Expect = 0.056 Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 1/43 (2%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ-NTKGFIYKR 405 ++GG +A L + ++++ATPGRL+DHL+ + +GF ++ Sbjct: 168 IVGGMNMMDQARDLMRKPHIIIATPGRLMDHLEVHKRGFALRK 210
>RHLB_ERWCT (Q6CZD9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 429 Score = 36.2 bits (82), Expect = 0.073 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H+ A+ L LG GG+G + L GV++LV T GRL+D+ Sbjct: 98 QIHSDAEALSHLTGLKLGLAYGGDGYDKQLKVLENGVDILVGTTGRLIDY 147
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 36.2 bits (82), Expect = 0.073 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP + E K+ +Q LG+ ++GG+ +A L G +++ATPGRL+D Sbjct: 448 LAPTRELAQQIEIEARKF-TQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDC 506 Query: 373 LQ 378 ++ Sbjct: 507 IE 508
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 36.2 bits (82), Expect = 0.073 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + +E K+ S + V GG + + LA+GV + +ATPGRL+D L Sbjct: 184 LAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDML 243 Query: 376 QNTK 387 + K Sbjct: 244 ETGK 247
>DHH1_NEUCR (Q7S5D9) ATP-dependent RNA helicase dhh-1 (EC 3.6.1.-)| Length = 569 Score = 35.8 bits (81), Expect = 0.096 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V K L K+ + GG G R + +L V+++V TPGR+LD Sbjct: 128 QTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILD 176
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 35.8 bits (81), Expect = 0.096 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 7/77 (9%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + KE K+ + + V GG + + L +GV +L+ATPGRL+D L Sbjct: 192 LAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDML 251 Query: 376 Q----NTKGFIYKRLKE 414 + N K Y L E Sbjct: 252 EIGKTNLKRVTYLVLDE 268
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 35.8 bits (81), Expect = 0.096 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 5/63 (7%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAK-GVNLLVATPGRLLD 369 LAP + KE K+ + LGY +IGG+ + +++ + GV+L+VATPGRL+D Sbjct: 252 LAPTRELALQITKEAEKF-CKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVD 310 Query: 370 HLQ 378 ++ Sbjct: 311 SIE 313
>RHLB_SHIFL (P0A8K0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 35.8 bits (81), Expect = 0.096 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 98 QIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 147
>RHLB_SALTY (P0A2P0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 35.8 bits (81), Expect = 0.096 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 98 QIHADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 147
>RHLB_SALTI (P0A2P1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 35.8 bits (81), Expect = 0.096 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 98 QIHADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 147
>RHLB_ECOLI (P0A8J8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 35.8 bits (81), Expect = 0.096 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 98 QIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 147
>RHLB_ECOL6 (P0A8J9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 35.8 bits (81), Expect = 0.096 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 98 QIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 147
>RHLB_ECO57 (Q8XAT4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 35.8 bits (81), Expect = 0.096 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q H A+ L + LG GG+G + L GV++L+ T GRL+D+ Sbjct: 98 QIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDY 147
>DHH1_GIBZE (Q4HW67) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 486 Score = 35.8 bits (81), Expect = 0.096 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V K L K+ + GG G R + +L V+++V TPGR+LD Sbjct: 125 QTSQVCKTLGKHLGINVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILD 173
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 35.8 bits (81), Expect = 0.096 Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL-------QN 381 Q VA L Y +GG R + ++L GV+++V TPGR+ D L N Sbjct: 114 QIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDN 173 Query: 382 TKGFIYKRLKEW--RGSKNVYKHQGFHKL 462 K FI E RG K V H F KL Sbjct: 174 LKLFILDEADEMLSRGFK-VQIHDIFKKL 201
>DBP6_SCHPO (Q76PD3) ATP-dependent RNA helicase dbp6 (EC 3.6.1.-)| Length = 604 Score = 35.8 bits (81), Expect = 0.096 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Frame = +1 Query: 175 RSVPSSDPP*LAPRGSQTHNVAKELVKYHSQTLGYVIGGNGRRT--------EADQLAKG 330 R+VP + P T VAK Y S V G+++ D+ Sbjct: 201 RTVPRLRCVVIVPTRELTVQVAKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECR 260 Query: 331 VNLLVATPGRLLDHLQNTKGFIYKRLK 411 +++LV+TPGRL+DH++N + F + L+ Sbjct: 261 IDVLVSTPGRLVDHIRNDESFSLQHLR 287
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 35.4 bits (80), Expect = 0.13 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + +E K+ + V GG R + L +GV + +ATPGRLLD L Sbjct: 201 LAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDML 260 Query: 376 QNTK 387 + K Sbjct: 261 DSNK 264
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 35.4 bits (80), Expect = 0.13 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP + E K+ ++ LG+ ++GG+ +A L G +++ATPGRL+D Sbjct: 451 LAPTRELAQQIEIEAKKF-TEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDC 509 Query: 373 LQ 378 ++ Sbjct: 510 IE 511
>DBP45_DROME (Q07886) Probable ATP-dependent RNA helicase Dbp45A (EC 3.6.1.-)| (DEAD box protein 45A) Length = 521 Score = 35.4 bits (80), Expect = 0.13 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 V GG + E+ +L + +++VA PGRL DHL F + LK Sbjct: 109 VSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLK 152
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 35.4 bits (80), Expect = 0.13 Identities = 17/34 (50%), Positives = 23/34 (67%) Frame = +1 Query: 274 GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 G V GG + + L +GV++LVATPGRL+D L Sbjct: 206 GCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFL 239
>DHH1_ASPOR (Q2U5A2) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 511 Score = 35.0 bits (79), Expect = 0.16 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT +V K L K+ + GG G + +L V++LV TPGR+LD Sbjct: 130 QTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLD 178
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 35.0 bits (79), Expect = 0.16 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%) Frame = +1 Query: 130 REAAGSIDTTAVVLLRSVPSSDPP*LAPRGSQTHNVAKELVKYHSQTLGYV-------IG 288 + G T +V +L+ + DP A + T +A+++ K S Y+ IG Sbjct: 74 QSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133 Query: 289 GNGRRTEADQLAKGVNLLVATPGRLLD 369 G R + +L G++++V TPGR+ D Sbjct: 134 GTSVRDDQRKLEAGIHVVVGTPGRVGD 160
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 35.0 bits (79), Expect = 0.16 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + KE K+ + V GG + + L +GV +L+ATPGRL+D L Sbjct: 193 LAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDML 252 Query: 376 Q----NTKGFIYKRLKE 414 + N K Y L E Sbjct: 253 EIGKTNLKRVTYLVLDE 269
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 35.0 bits (79), Expect = 0.16 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%) Frame = +1 Query: 223 QTHNVAK---ELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 QTH + + L++ S L IGG + + + + GV+++VATPGRL+D LQ Sbjct: 272 QTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQ 329
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 35.0 bits (79), Expect = 0.16 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%) Frame = +1 Query: 223 QTHNVAK---ELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 QTH + + L++ S L IGG + + + + GV+++VATPGRL+D LQ Sbjct: 272 QTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQ 329
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q NV + Y + T+ IGG + + + GV ++V TPGR+ D ++ Sbjct: 106 QIQNVITHIGLYLNVTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIE 157
>DBP8_ASPOR (Q2UKX3) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 443 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 + GG R++A L++ ++++ATPGRL DH+ NT G Sbjct: 115 ITGGTDMRSQALALSQRPHVVIATPGRLADHI-NTSG 150
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 34.7 bits (78), Expect = 0.21 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQN 381 ++GG+ + L G ++L+ATPGRLLD L N Sbjct: 291 IVGGHSMSDISHTLRNGCDILIATPGRLLDVLDN 324
>RHLB_PHOLL (Q7MYL2) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/50 (32%), Positives = 29/50 (58%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 Q ++ A++L + +G GG+G + L GV++L+ T GRL+D+ Sbjct: 99 QIYSDAEDLAQATGLKMGLAYGGDGYDKQLKILESGVDILIGTTGRLIDY 148
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +1 Query: 238 AKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 A L+++ +G + GG G + +QLA ++LV T GRL+D Sbjct: 103 ADALIEHCGLKMGVIYGGEGYEGQKEQLAAQPDILVGTTGRLID 146
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/31 (51%), Positives = 20/31 (64%) Frame = +1 Query: 286 GGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 GG + D L +++VATPGRLLDHLQ Sbjct: 108 GGQPFGMQRDSLQHAPHIIVATPGRLLDHLQ 138
>DHH1_ASPFU (Q4WWD3) ATP-dependent RNA helicase dhh1 (EC 3.6.1.-)| Length = 507 Score = 34.7 bits (78), Expect = 0.21 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V K L K+ + GG G + +L V++LV TPGR+LD Sbjct: 130 QTSQVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLD 178
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 34.7 bits (78), Expect = 0.21 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 L+P + KE++ + + + GG+ + ++L KGV ++V TPGR++D Sbjct: 373 LSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDL 432 Query: 373 LQNTKG 390 L G Sbjct: 433 LAANSG 438
>PRP5_KLULA (Q6CKI1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 812 Score = 34.7 bits (78), Expect = 0.21 Identities = 13/38 (34%), Positives = 26/38 (68%) Frame = +1 Query: 283 IGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFI 396 +GG+ + + ++L +GV+++VATPGR +D + G + Sbjct: 355 VGGSELKQQINELKRGVDIIVATPGRFIDLMTLNSGHL 392
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 34.7 bits (78), Expect = 0.21 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q +N A L K G GG+G + + +GV++L+ T GR++D+++ Sbjct: 97 QINNDAALLTKATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVK 148
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 34.3 bits (77), Expect = 0.28 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + KE K+ + V GG R + +L +G +++ATPGRL+D L Sbjct: 189 LAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDML 248 Query: 376 QNTK 387 + K Sbjct: 249 EAGK 252
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 34.3 bits (77), Expect = 0.28 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + + VK+ + GG + + L KG ++++ATPGRL+D+L Sbjct: 90 LAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQREMLRKGADVVIATPGRLIDYL 149 Query: 376 Q 378 + Sbjct: 150 K 150
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 34.3 bits (77), Expect = 0.28 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + + VK+ + GG + + L KG ++++ATPGRL+D+L Sbjct: 90 LAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIATPGRLIDYL 149 Query: 376 Q 378 + Sbjct: 150 K 150
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 34.3 bits (77), Expect = 0.28 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +1 Query: 286 GGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 GGN + + +L +G ++VATPGRL+D L G Sbjct: 670 GGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGG 704
>DDX51_MOUSE (Q6P9R1) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 639 Score = 34.3 bits (77), Expect = 0.28 Identities = 13/26 (50%), Positives = 21/26 (80%) Frame = +1 Query: 334 NLLVATPGRLLDHLQNTKGFIYKRLK 411 +++VATPGRL+DH+ T GF ++L+ Sbjct: 313 DIVVATPGRLVDHIDQTPGFSLQQLR 338
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 34.3 bits (77), Expect = 0.28 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKE---LVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 +AP +AK+ L K+ +G V GG + L +GV++L+ T GR++D++ Sbjct: 90 MAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYV 149 Query: 376 Q 378 + Sbjct: 150 R 150
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 34.3 bits (77), Expect = 0.28 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 Q VA + K + GG + + L +GV + +ATPGRL+D L++ K Sbjct: 180 QVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 34.3 bits (77), Expect = 0.28 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 Q VA + K + GG + + L +GV + +ATPGRL+D L++ K Sbjct: 180 QVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGK 234
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 34.3 bits (77), Expect = 0.28 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + +E+ K+ + V GG + + L++GV + +ATPGRL+D L Sbjct: 211 LAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDML 270 Query: 376 QNTK 387 ++ K Sbjct: 271 ESGK 274
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 34.3 bits (77), Expect = 0.28 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG + + LA+GV + +ATPGRL+D L+ K Sbjct: 234 VYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGK 269
>DDX51_HUMAN (Q8N8A6) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 666 Score = 34.3 bits (77), Expect = 0.28 Identities = 13/26 (50%), Positives = 21/26 (80%) Frame = +1 Query: 334 NLLVATPGRLLDHLQNTKGFIYKRLK 411 +++VATPGRL+DH+ T GF ++L+ Sbjct: 341 DIVVATPGRLVDHIDQTPGFSLQQLR 366
>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 34.3 bits (77), Expect = 0.28 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 7/58 (12%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGY-------VIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 QTH + + K H Q G +GG D +++GV+++VATPGRL+D L Sbjct: 268 QTHEIIQHYSK-HLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDML 324
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 34.3 bits (77), Expect = 0.28 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 QTH V KE K + + GG+G + + ++++ATPGR L HL+ Sbjct: 205 QTHKVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATPGRFL-HLK 255
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 33.9 bits (76), Expect = 0.36 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = +1 Query: 220 SQTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 SQ H+ A++ V GG T+ Q+ +G +LL ATPGRL+D ++ Sbjct: 289 SQIHDEARKFTYRSWVKPAVVYGGADIVTQLRQIERGCDLLSATPGRLVDLME 341
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 33.9 bits (76), Expect = 0.36 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + ++ G + GG + L +G ++V TPGRLLDH Sbjct: 79 LAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDH 138 Query: 373 LQ 378 L+ Sbjct: 139 LK 140
>PSMA_HALSA (P57697) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 253 Score = 33.9 bits (76), Expect = 0.36 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNY-KDTSGKETIKLTIRALIEG 134 T WKA A G N ++EFLE Y S + I L +RAL EG Sbjct: 158 TSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNEG 202
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 33.9 bits (76), Expect = 0.36 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q NV + Y T+ IGG + + GV ++V TPGR+LD ++ Sbjct: 106 QIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGVQIVVGTPGRVLDMIE 157
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 33.5 bits (75), Expect = 0.48 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V + L Y + +GG R + LA GV+++V TPGR+ D L+ Sbjct: 124 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLR 175
>DHH1_YARLI (Q6C0X2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 522 Score = 33.5 bits (75), Expect = 0.48 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V K L K+ + GG R + +L V++LV TPGR+LD Sbjct: 111 QTSQVCKTLGKHLGIKVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLD 159
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 33.5 bits (75), Expect = 0.48 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + +G + GG + L +G ++V TPGRLLDH Sbjct: 80 LAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQGPQIVVGTPGRLLDH 139 Query: 373 LQ 378 L+ Sbjct: 140 LK 141
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 33.5 bits (75), Expect = 0.48 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 +IGG+ + GV+++VATPGRL+D L+ Sbjct: 271 IIGGHQYEETVHSVRNGVHIVVATPGRLIDSLE 303
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 33.5 bits (75), Expect = 0.48 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 +AP + E K+ + LG+ ++GG+ +A L G ++VATPGRLLD Sbjct: 370 MAPTRELVQQIETEARKF-AGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDC 428 Query: 373 LQ 378 ++ Sbjct: 429 IE 430
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 33.5 bits (75), Expect = 0.48 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V + L Y + +GG R + LA GV+++V TPGR+ D L+ Sbjct: 123 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLR 174
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 33.5 bits (75), Expect = 0.48 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V + L Y + +GG R + LA GV+++V TPGR+ D L+ Sbjct: 120 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLR 171
>DBP8_ASPFU (Q4WXW1) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 526 Score = 33.5 bits (75), Expect = 0.48 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 + GG R +A LA ++++ATPGRL DH++++ Sbjct: 198 ITGGTDMRPQAIALAGRPHVVIATPGRLADHIKSS 232
>PRP5_CANGA (Q6FML5) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 33.5 bits (75), Expect = 0.48 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 286 GGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 GG+ + + D+L GV + +ATPGR +D L G + L+ Sbjct: 362 GGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVSTLR 403
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 33.5 bits (75), Expect = 0.48 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG R + +L +G +L+VATPGRL D L+ K Sbjct: 262 VYGGADIRQQIRELERGCDLIVATPGRLNDLLERGK 297
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 33.1 bits (74), Expect = 0.62 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + +G + GG + L +G ++V TPGRLLDH Sbjct: 80 LAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQGPQIVVGTPGRLLDH 139 Query: 373 LQ 378 L+ Sbjct: 140 LK 141
>DHH1_KLULA (Q6CSZ7) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 514 Score = 33.1 bits (74), Expect = 0.62 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V + L K+ + GG R + +L + V++LV TPGR+LD Sbjct: 119 QTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLD 167
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 33.1 bits (74), Expect = 0.62 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 + GG + + L +GV + VATPGRL+D L+ K Sbjct: 217 IYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGK 252
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 33.1 bits (74), Expect = 0.62 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGY----VIGGNGRRTEADQLAKGVNLLVATPGRLLDH 372 + P + KE K+ S++L V GG G + +L +G ++V TPGR++D Sbjct: 419 MTPTRELALQITKECKKF-SKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 477 Query: 373 LQNTKG 390 L G Sbjct: 478 LGANNG 483
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 33.1 bits (74), Expect = 0.62 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG + Q+ G NLLVATPGRL D L+ Sbjct: 276 VYGGASIDNQIKQMRYGCNLLVATPGRLTDLLE 308
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 33.1 bits (74), Expect = 0.62 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + + G + GG + L +G ++V TPGRLLDH Sbjct: 79 LAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDH 138 Query: 373 LQ 378 L+ Sbjct: 139 LK 140
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 33.1 bits (74), Expect = 0.62 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + + G + GG + L +G ++V TPGRLLDH Sbjct: 79 LAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDH 138 Query: 373 LQ 378 L+ Sbjct: 139 LK 140
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 33.1 bits (74), Expect = 0.62 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + + G + GG + L +G ++V TPGRLLDH Sbjct: 79 LAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDH 138 Query: 373 LQ 378 L+ Sbjct: 139 LK 140
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 33.1 bits (74), Expect = 0.62 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTLGYVI----GGNGRRTEADQLAKGVNLLVATPGRLLDH 372 LAP VA+ + + G + GG + L +G ++V TPGRLLDH Sbjct: 79 LAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDH 138 Query: 373 LQ 378 L+ Sbjct: 139 LK 140
>PSA2_SCHPO (O94579) Probable proteasome subunit alpha type 2 (EC 3.4.25.1)| Length = 245 Score = 32.7 bits (73), Expect = 0.81 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +3 Query: 3 TRTAWKAHATGRNSNSMREFLEKNYKD 83 T AWKA A G++S + + FLEK Y D Sbjct: 154 TYFAWKATAIGKSSTAAKTFLEKRYND 180
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 32.7 bits (73), Expect = 0.81 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 + GG+ + L +G ++V TPGR++DHL+ Sbjct: 116 IYGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLE 148
>PSA4_SPIOL (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) Length = 250 Score = 32.7 bits (73), Expect = 0.81 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYK-DTSGKETIKLTIRAL 125 WKA A G N+ + + L+++YK D + ++ +KL ++AL Sbjct: 159 WKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKAL 196
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 32.7 bits (73), Expect = 0.81 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%) Frame = +1 Query: 238 AKELVKYHSQTLGYVIGGNGRRTEADQL-AKGVNLLVATPGRLLDHLQNTKGFIYKRLKE 414 A +L KY + + +GG + QL A+ ++LVATPGRLLD N +G ++ + E Sbjct: 103 AADLTKYTNLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDF--NQRGEVHLDMVE 160
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 32.7 bits (73), Expect = 0.81 Identities = 17/56 (30%), Positives = 26/56 (46%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 Q H K +K GG R + +L +G ++V TPGR++D L +G Sbjct: 685 QIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQG 740
>DHH1_SCHPO (Q09181) Putative ATP-dependent RNA helicase ste13 (EC 3.6.1.-)| Length = 485 Score = 32.7 bits (73), Expect = 0.81 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V K L K+ + + GG R + +L V+++V TPGR+LD Sbjct: 127 QTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLD 175
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 32.7 bits (73), Expect = 0.81 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V + L K+ + GG R + +L + V++LV TPGR+LD Sbjct: 112 QTSQVVRTLGKHCGISCMVTTGGTNLRDDIMRLNEPVHVLVGTPGRVLD 160
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 32.7 bits (73), Expect = 0.81 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q VA E + + GG + + L +GV + +ATPGRL+D L+ Sbjct: 182 QVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 233
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 32.7 bits (73), Expect = 0.81 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q VA E + + GG + + L +GV + +ATPGRL+D L+ Sbjct: 182 QVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 233
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 32.7 bits (73), Expect = 0.81 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + E+ K+ + V GG + + L++GV + +ATPGRL+D L Sbjct: 209 LAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDML 268 Query: 376 Q 378 + Sbjct: 269 E 269
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 32.7 bits (73), Expect = 0.81 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q A+EL ++ + + GG + D +L+VATPGRLL +++ Sbjct: 91 QVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIK 142
>SPB4_KLULA (Q6CN92) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 596 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%) Frame = +1 Query: 220 SQTHNVAKELVKYHSQTL----GYVIGGNGRRTEADQLAKGVN----LLVATPGRLLDHL 375 SQ H+V ++ +KY+ L ++ G + D + + +LV TPGR+LD L Sbjct: 97 SQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRDDINSFTDNRPQILVGTPGRVLDFL 156 Query: 376 QNT 384 Q T Sbjct: 157 QKT 159
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 32.7 bits (73), Expect = 0.81 Identities = 15/34 (44%), Positives = 22/34 (64%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQN 381 ++GG+ + L G ++LVATPGRLLD L + Sbjct: 250 IVGGHSLEEISANLRDGCDILVATPGRLLDCLDS 283
>RHLB_HAEIN (P44922) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 415 Score = 32.7 bits (73), Expect = 0.81 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q N A+ L K GG+G + + +GV++L+ T GR++D+++ Sbjct: 98 QISNDAEFLAKASGLKTALAYGGDGYDKQLQAIERGVDILIGTTGRVIDYVK 149
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 32.7 bits (73), Expect = 0.81 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +1 Query: 247 LVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 L Y + + V+GG +A QL + + ++ATPGRL H+ N+ Sbjct: 100 LGSYMNIRVALVVGGESIVDQALQLQRKPHFIIATPGRLAHHILNS 145
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 32.7 bits (73), Expect = 0.81 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQTL---GYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + +E+ K+ + V GG + + L++GV + +ATPGRL+D L Sbjct: 213 LAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDML 272 Query: 376 QNTK 387 + K Sbjct: 273 EAGK 276
>YOQ2_CAEEL (P34640) Putative ATP-dependent RNA helicase ZK512.2 in chromosome| III (EC 3.6.1.-) Length = 578 Score = 32.7 bits (73), Expect = 0.81 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +1 Query: 325 KGVNLLVATPGRLLDHLQNTKGFIYKRLK 411 K VN+LVATPGRL +Q+ K I ++++ Sbjct: 130 KNVNILVATPGRLFQIIQHEKTLIARKMR 158
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 32.7 bits (73), Expect = 0.81 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V + L K+ + GG R + +L + V++LV TPGR+LD Sbjct: 129 QTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLD 177
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG ++ Q+ +G +LLVATPGRL+D ++ Sbjct: 305 VYGGADIGSQLRQIERGCDLLVATPGRLVDLIE 337
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG ++ Q+ +G +LLVATPGRL+D ++ Sbjct: 307 VYGGADIGSQLRQIERGCDLLVATPGRLVDLIE 339
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG ++ Q+ +G +LLVATPGRL+D ++ Sbjct: 309 VYGGADIGSQLRQIERGCDLLVATPGRLVDLIE 341
>DBP8_KLULA (Q6CXW0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 L P +A++ + S + V+GG +A +L K + ++ATPGRL H+ Sbjct: 78 LTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESIVQQAIELQKRPHFIIATPGRLAHHV 137 Query: 376 QNT 384 N+ Sbjct: 138 LNS 140
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNT 384 ++GG +A +L + + +VATPGRL DH+ N+ Sbjct: 103 IVGGEDIVKQALELQRRPHFVVATPGRLADHILNS 137
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/49 (34%), Positives = 25/49 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 Q V + L Y + +GG R + LA GV+++V TPGR+ D Sbjct: 124 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFD 172
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKYHSQT---LGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 L+P + E VK+ + + GG + + +L++GV+++VATPGRL D L Sbjct: 223 LSPTRELATQIQAEAVKFGKSSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDIL 282 Query: 376 Q 378 + Sbjct: 283 E 283
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V + L Y + +GG R + L+ GV+++V TPGR+ D L+ Sbjct: 123 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 174
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V + L Y + +GG R + L+ GV+++V TPGR+ D L+ Sbjct: 123 QIEKVMRALGDYLGVKVTACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLR 174
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V L + + IGG R +A+ L G ++V TPGR+ D ++ Sbjct: 105 QIQKVVMALALHMDVKVHACIGGTDPREDAEALRAGAQIVVGTPGRVFDMIE 156
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 Q V + L Y + +GG R + L GV+++V TPGR+ D L+ Sbjct: 122 QIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLR 173
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 32.3 bits (72), Expect = 1.1 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 7/77 (9%) Frame = +1 Query: 205 LAPRGSQTHNVAKELVKY-HSQTLGY--VIGGNGRRTEADQLAKGVNLLVATPGRLLDHL 375 LAP + E K+ HS + V GG + + L++G +++ATPGRL+D L Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251 Query: 376 Q----NTKGFIYKRLKE 414 + N K Y L E Sbjct: 252 EIGKTNLKRVTYLVLDE 268
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG + L +G +LLVATPGRL+D ++ K Sbjct: 299 VYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGK 334
>PSMA_SULSO (Q9UXC6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 241 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYK-DTSGKETIKLTIRAL 125 ++A A G+ + EFLEKNYK D + +ETI L ++AL Sbjct: 162 YQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKAL 199
>DHH1_CANAL (Q5AAW3) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 549 Score = 32.3 bits (72), Expect = 1.1 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLLD 369 QT V + L K+ GG R + +L V++LV TPGR+LD Sbjct: 113 QTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLD 161
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG ++ Q+ +G +LLVATPGRL+D ++ Sbjct: 313 VYGGADIGSQLRQIERGCDLLVATPGRLVDLIE 345
>PSMA_PYRAE (Q8ZVM1) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 243 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 21 AHATGRNSNSMREFLEKNYK-DTSGKETIKLTIRAL 125 A A G S ++ EFLEKNYK D E I+L ++AL Sbjct: 163 ATAIGAESGTITEFLEKNYKFDMEMGECIELALKAL 198
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG + + L++GV + +ATPGRL+D L+ Sbjct: 247 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLE 279
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 32.0 bits (71), Expect = 1.4 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQ 378 V GG + + L++GV + +ATPGRL+D L+ Sbjct: 228 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLE 260
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 32.0 bits (71), Expect = 1.4 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 4/74 (5%) Frame = +1 Query: 205 LAPRGSQTHNVAKE---LVKYHSQTLGYVIGGNGRRTEADQL-AKGVNLLVATPGRLLDH 372 +AP +AK+ L KY + +GG + QL A+ ++LVATPGRLLD Sbjct: 90 IAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDF 149 Query: 373 LQNTKGFIYKRLKE 414 N +G ++ + E Sbjct: 150 --NQRGEVHLDMVE 161
>PSMA_THEK1 (O24733) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYKDTSGK-ETIKLTIRAL 125 WKA A G N+ E++Y+D GK + IKL I AL Sbjct: 161 WKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILAL 198
>PSMA_PYRKO (Q5JIU9) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +3 Query: 15 WKAHATGRNSNSMREFLEKNYKDTSGK-ETIKLTIRAL 125 WKA A G N+ E++Y+D GK + IKL I AL Sbjct: 161 WKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILAL 198
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 32.0 bits (71), Expect = 1.4 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +3 Query: 12 AWKAHATGRNSNSMREFLEKNYK-DTSGKETIKLTIRAL 125 AWKA A G N+ E+ YK D S +E IKL I AL Sbjct: 160 AWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFAL 198
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG + L +G +LLVATPGRL+D ++ K Sbjct: 298 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK 333
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG + L +G +LLVATPGRL+D ++ K Sbjct: 341 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK 376
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 32.0 bits (71), Expect = 1.4 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 286 GGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTKG 390 GG+ ++ +L KG ++V TPGR++D L G Sbjct: 426 GGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSG 460
>PSA2_ORYSA (Q9LSU2) Proteasome subunit alpha type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit B) (20S proteasome subunit alpha-2) Length = 235 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 12 AWKAHATGRNSNSMREFLEKNY-KDTSGKETIKLTIRALIEG 134 +WKA A G+N ++ + FLEK Y +D + I I L EG Sbjct: 157 SWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEG 198
>PSA2B_ARATH (Q8L4A7) Proteasome subunit alpha type 2-B (EC 3.4.25.1) (20S| proteasome alpha subunit B-2) Length = 235 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 12 AWKAHATGRNSNSMREFLEKNY-KDTSGKETIKLTIRALIEG 134 +WKA A G+N ++ + FLEK Y +D + I I L EG Sbjct: 157 SWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEG 198
>PSA2A_ARATH (O23708) Proteasome subunit alpha type 2-A (EC 3.4.25.1) (20S| proteasome alpha subunit B) (Proteasome component 3) Length = 235 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +3 Query: 12 AWKAHATGRNSNSMREFLEKNY-KDTSGKETIKLTIRALIEG 134 +WKA A G+N ++ + FLEK Y +D + I I L EG Sbjct: 157 SWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEG 198
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +1 Query: 223 QTHNVAKELVKYHSQTLGYVIGGNGRRTEADQLAKGVNLLVATPGRLL 366 QT KEL K+ ++GG+ + L + ++++ATPGRL+ Sbjct: 180 QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLV 227
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG + L +G +LLVATPGRL+D ++ K Sbjct: 299 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK 334
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 280 VIGGNGRRTEADQLAKGVNLLVATPGRLLDHLQNTK 387 V GG + L +G +LLVATPGRL+D ++ K Sbjct: 298 VYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGK 333 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,334,054 Number of Sequences: 219361 Number of extensions: 1576019 Number of successful extensions: 4485 Number of sequences better than 10.0: 344 Number of HSP's better than 10.0 without gapping: 4310 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4475 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
