ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart15d04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 204 bits (103), Expect = 2e-49 Identities = 160/179 (89%) Strand = Plus / Minus Query: 222 tcagacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgt 281 |||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| | Sbjct: 33188441 tcagacacacaatgttgccaaggaattgatgaagtatcactcacaaactcttggatatat 33188382 Query: 282 aattggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgtt 341 ||||| || |||||||||||| |||||| || |||||||||||||| |||||||| || Sbjct: 33188381 tattggcggtaatggccggagaggtgaagcagatcagcttgcaaagggagtcaatttatt 33188322 Query: 342 agtagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatatata 400 ||| || |||||||||||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 33188321 agttgctacaccaggcaggcttttggaccatctgcagaataccaagggattcatatata 33188263 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 17204961 atttgaacttgcatgtttatggagtg 17204986 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gtttatggagtgcaaggatcg 546 ||||||||||||||||||||| Sbjct: 14177249 gtttatggagtgcaaggatcg 14177269
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 204 bits (103), Expect = 2e-49 Identities = 160/179 (89%) Strand = Plus / Minus Query: 222 tcagacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgt 281 |||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| | Sbjct: 33278951 tcagacacacaatgttgccaaggaattgatgaagtatcactcacaaactcttggatatat 33278892 Query: 282 aattggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgtt 341 ||||| || |||||||||||| |||||| || |||||||||||||| |||||||| || Sbjct: 33278891 tattggcggtaatggccggagaggtgaagcagatcagcttgcaaagggagtcaatttatt 33278832 Query: 342 agtagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatatata 400 ||| || |||||||||||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 33278831 agttgctacaccaggcaggcttttggaccatctgcagaataccaagggattcatatata 33278773 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 17198530 atttgaacttgcatgtttatggagtg 17198555 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gtttatggagtgcaaggatcg 546 ||||||||||||||||||||| Sbjct: 14172224 gtttatggagtgcaaggatcg 14172244
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 204 bits (103), Expect = 2e-49 Identities = 160/179 (89%) Strand = Plus / Plus Query: 222 tcagacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgt 281 |||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| | Sbjct: 56114 tcagacacacaatgttgccaaggaattgatgaagtatcactcacaaactcttggatatat 56173 Query: 282 aattggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgtt 341 ||||| || |||||||||||| |||||| || |||||||||||||| |||||||| || Sbjct: 56174 tattggcggtaatggccggagaggtgaagcagatcagcttgcaaagggagtcaatttatt 56233 Query: 342 agtagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatatata 400 ||| || |||||||||||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 56234 agttgctacaccaggcaggcttttggaccatctgcagaataccaagggattcatatata 56292
>ref|XM_469984.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2088 Score = 202 bits (102), Expect = 9e-49 Identities = 159/178 (89%) Strand = Plus / Plus Query: 223 cagacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgta 282 ||||||||||||||||||||||||||| ||||||||||||||||||| || |||||| | Sbjct: 616 cagacacacaatgttgccaaggaattgatgaagtatcactcacaaactcttggatatatt 675 Query: 283 attggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgtta 342 ||||| || |||||||||||| |||||| || |||||||||||||| |||||||| ||| Sbjct: 676 attggcggtaatggccggagaggtgaagcagatcagcttgcaaagggagtcaatttatta 735 Query: 343 gtagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatatata 400 || || |||||||||||||| |||||||||||||| || |||||||| |||||||||| Sbjct: 736 gttgctacaccaggcaggcttttggaccatctgcagaataccaagggattcatatata 793
>gb|AY108050.1| Zea mays PCO134180 mRNA sequence Length = 1544 Score = 167 bits (84), Expect = 5e-38 Identities = 153/176 (86%) Strand = Plus / Plus Query: 223 cagacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgta 282 ||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||| Sbjct: 179 cagacacacaatgttgccaaggagttaatgaaatatcactcacaaactctcggatatgtc 238 Query: 283 attggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgtta 342 |||||||| ||| || |||| ||| ||||| ||||||||||||||| ||||||| ||| Sbjct: 239 attggtggtaataatcgaagaagtgaggctgatcagcttgcaaaggggatcaatttatta 298 Query: 343 gtagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatata 398 || || || ||||||||||| ||||||||||| ||||| |||||| |||||||||| Sbjct: 299 gttgctaccccaggcaggcttttggaccatctacaaaataccaagagtttcatata 354
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 20870892 ccgcgtggaaggccaacgccacggggaggaactccaactccatgagggagttcttggaga 20870951 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctc 110 |||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 20870952 agaattacaaggagacctctggcaaagagaccatcaagctc 20870992 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agaccttggatttgaagttg 522 |||||||||||||||||||| Sbjct: 16876618 agaccttggatttgaagttg 16876599
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 63118 ccgcgtggaaggccaacgccacggggaggaactccaactccatgagggagttcttggaga 63177 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctc 110 |||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 63178 agaattacaaggagacctctggcaaagagaccatcaagctc 63218
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 145921 ccgcgtggaaggccaacgccacggggaggaactccaactccatgagggagttcttggaga 145980 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctc 110 |||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 145981 agaattacaaggagacctctggcaaagagaccatcaagctc 146021
>dbj|AB032061.1| Oryza sativa (japonica cultivar-group) OsPAD1 mRNA for alpha 4 subunit of 20S proteasome, complete cds Length = 1007 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 506 ccgcgtggaaggccaacgccacggggaggaactccaactccatgagggagttcttggaga 565 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctc 110 |||| |||||||| ||||| ||||| ||||||||||||||| Sbjct: 566 agaattacaaggagacctctggcaaagagaccatcaagctc 606
>ref|XM_507323.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1112_E06.28 mRNA Length = 1040 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 598 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 657 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 658 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 712
>ref|XM_483663.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1024 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 578 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 637 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 638 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 692
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 31771 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 31830 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31831 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 31885
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 27526755 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 27526814 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 27526815 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 27526869
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 9045 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 9104 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9105 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 9159
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 90004 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 90063 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 90064 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 90118
>dbj|AK098875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D12, full insert sequence Length = 1024 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 578 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 637 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 638 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 692
>dbj|AK061808.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-A07, full insert sequence Length = 1040 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 598 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 657 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 658 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 712
>gb|U92540.1|OSU92540 Oryza sativa proteasome alpha subunit mRNA, complete cds Length = 939 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||||||||||||| ||||||| || | ||||||||||||||| | |||||||| |||| Sbjct: 545 ccgcctggaaggccaacgccaccggccgcaactccaactccatgcgcgagttcctcgaga 604 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagccct 124 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 605 agaattacaaggacacctccggcaaggagaccatcaagcttgccatccgagccct 659
>gb|AY103887.1| Zea mays PCO095017 mRNA sequence Length = 1119 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 15 tggaaggcccacgccacggggaggaactccaactccatgagggagttcctggagaagaac 74 ||||||||| | |||||||| |||||||||||||| ||| | |||||||||||||||||| Sbjct: 583 tggaaggccaatgccacgggaaggaactccaactctatgcgtgagttcctggagaagaac 642 Query: 75 tacaaggacacctccggcaaggagaccatcaa 106 |||||||| ||||||||||||||||||||||| Sbjct: 643 tacaaggagacctccggcaaggagaccatcaa 674
>ref|XM_479295.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 526 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccacacacttttct 585 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 354 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccatacaattttct 413 Query: 586 gccaactatgc 596 |||| |||||| Sbjct: 414 gccatctatgc 424
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Minus Query: 526 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccacacacttttct 585 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 26625794 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccatacaattttct 26625735 Query: 586 gccaactatgc 596 |||| |||||| Sbjct: 26625734 gccatctatgc 26625724 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 26510670 atttgaacttgcatgtttatggagtg 26510645 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 23385850 atttgaacttgcatgtttatggagtg 23385825
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Minus Query: 526 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccacacacttttct 585 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 171065 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccatacaattttct 171006 Query: 586 gccaactatgc 596 |||| |||||| Sbjct: 171005 gccatctatgc 170995 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 55941 atttgaacttgcatgtttatggagtg 55916
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Minus Query: 526 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccacacacttttct 585 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 43398 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccatacaattttct 43339 Query: 586 gccaactatgc 596 |||| |||||| Sbjct: 43338 gccatctatgc 43328
>dbj|AK100810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O08, full insert sequence Length = 1310 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 526 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccacacacttttct 585 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 354 gtttatggagtgcaaggatcggaccaagcgtagctctgtgatgttaccatacaattttct 413 Query: 586 gccaactatgc 596 |||| |||||| Sbjct: 414 gccatctatgc 424
>gb|BT016493.1| Zea mays clone Contig326 mRNA sequence Length = 1011 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||| ||||||||| |||| || || | ||||||||||||||| | ||||| || |||| Sbjct: 522 ccgcttggaaggccaacgcaaccggccgcaactccaactccatgcgcgagtttctcgaga 581 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagc 121 |||| |||||||| || ||||| |||||||||||||||||| ||||| |||| Sbjct: 582 agaattacaaggagacgtccggtaaggagaccatcaagctcgccatcagagc 633
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 224 agacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgtaa 283 ||||||||||||||||||||||||| ||| |||||| |||||||| || |||||||||| Sbjct: 19679230 agacacacaatgttgccaaggaattaatgaggtatcattcacaaactcttggatatgtaa 19679289 Query: 284 ttggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgttag 343 ||||||| | || | ||| || ||||| ||||| || || ||| ||||| | |||| Sbjct: 19679290 ttggtggtattgacttgaggggcgaggctgagcagctcgcgaaagggatcaatgtattag 19679349 Query: 344 tagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatatat 399 | ||||| ||||| ||||| |||||||| ||||||| ||||| |||||| |||| Sbjct: 19679350 ttgcaacgccaggaaggcttctggaccatatgcaaaaaaccaaaagtttcaaatat 19679405
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Plus Query: 224 agacacacaatgttgccaaggaattggtgaagtatcactcacaaaccctcggatatgtaa 283 ||||||||||||||||||||||||| ||| |||||| |||||||| || |||||||||| Sbjct: 63686 agacacacaatgttgccaaggaattaatgaggtatcattcacaaactcttggatatgtaa 63745 Query: 284 ttggtggcaatggccggagaactgaagctgaccagcttgcaaagggggtcaatttgttag 343 ||||||| | || | ||| || ||||| ||||| || || ||| ||||| | |||| Sbjct: 63746 ttggtggtattgacttgaggggcgaggctgagcagctcgcgaaagggatcaatgtattag 63805 Query: 344 tagcaacaccaggcaggctgttggaccatctgcaaaacaccaagggtttcatatat 399 | ||||| ||||| ||||| |||||||| ||||||| ||||| |||||| |||| Sbjct: 63806 ttgcaacgccaggaaggcttctggaccatatgcaaaaaaccaaaagtttcaaatat 63861
>gb|AY107760.1| Zea mays PCO113667 mRNA sequence Length = 1128 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 10 ccgcctggaaggcccacgccacggggaggaactccaactccatgagggagttcctggaga 69 |||| ||||||||| |||| || || | ||||||||||||||| | ||||| || |||| Sbjct: 553 ccgcttggaaggccaacgcaaccggccgcaactccaactccatgcgcgagtttctcgaga 612 Query: 70 agaactacaaggacacctccggcaaggagaccatcaagctcaccatccgagc 121 |||| |||||||| || ||||| |||||||||||||||||| ||||| |||| Sbjct: 613 agaattacaaggagacgtccggtaaggagaccatcaagctcgccatcagagc 664
>emb|CR710932.2|CNS0GBI8 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 282 tgagggagttcctggagaagaactaca 308
>emb|CR706129.2|CNS0G7ST Tetraodon nigroviridis full-length cDNA Length = 915 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR692644.2|CNS0FXE8 Tetraodon nigroviridis full-length cDNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR685186.2|CNS0FRN2 Tetraodon nigroviridis full-length cDNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR684668.2|CNS0FR8O Tetraodon nigroviridis full-length cDNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR679521.2|CNS0FN9P Tetraodon nigroviridis full-length cDNA Length = 917 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR674601.2|CNS0FJHR Tetraodon nigroviridis full-length cDNA Length = 917 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR671855.2|CNS0FHDH Tetraodon nigroviridis full-length cDNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR670706.2|CNS0FGHK Tetraodon nigroviridis full-length cDNA Length = 917 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 577 tgagggagttcctggagaagaactaca 603
>emb|CR663629.2|CNS0FB0Z Tetraodon nigroviridis full-length cDNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR660686.2|CNS0F8R8 Tetraodon nigroviridis full-length cDNA Length = 916 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 576 tgagggagttcctggagaagaactaca 602
>emb|CR641097.2|CNS0ETN3 Tetraodon nigroviridis full-length cDNA Length = 914 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 ||||||||||||||||||||||||||| Sbjct: 575 tgagggagttcctggagaagaactaca 601
>ref|NM_126012.2| Arabidopsis thaliana PAD2; endopeptidase/ peptidase/ threonine endopeptidase AT5G66140 (PAD2) mRNA, complete cds Length = 1072 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 39 aactccaactccatgagggagttcctggagaagaactacaa 79 ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 540 aactccaactctattagggaattcctcgagaagaactacaa 580
>emb|Y13180.1|ATY13180 Arabidopsis thaliana mRNA for proteasome subunit prc6c Length = 740 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 39 aactccaactccatgagggagttcctggagaagaactacaa 79 ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 529 aactccaactctattagggaattcctcgagaagaactacaa 569
>emb|Y13179.1|ATY13179 Arabidopsis thaliana mRNA for proteasome subunit prc6b Length = 717 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 39 aactccaactccatgagggagttcctggagaagaactacaa 79 ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 506 aactccaactctattagggaattcctcgagaagaactacaa 546
>dbj|AB011474.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2A18 Length = 79899 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 39 aactccaactccatgagggagttcctggagaagaactacaa 79 ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 54277 aactccaactctattagggaattcctcgagaagaactacaa 54237
>gb|AF043523.1|AF043523 Arabidopsis thaliana 20S proteasome subunit PAD2 (PAD2) mRNA, complete cds Length = 942 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 39 aactccaactccatgagggagttcctggagaagaactacaa 79 ||||||||||| || ||||| ||||| |||||||||||||| Sbjct: 536 aactccaactctattagggaattcctcgagaagaactacaa 576
>gb|BC065608.1| Danio rerio zgc:77139, mRNA (cDNA clone MGC:77139 IMAGE:6961125), complete cds Length = 1290 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 |||||||||| |||||||||||||||| Sbjct: 607 tgagggagtttctggagaagaactaca 633
>ref|NM_213166.1| Danio rerio zgc:77139 (zgc:77139), mRNA Length = 1290 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactaca 78 |||||||||| |||||||||||||||| Sbjct: 607 tgagggagtttctggagaagaactaca 633
>ref|NM_117677.3| Arabidopsis thaliana ATRH1; ATP-dependent helicase AT4G15850 (ATRH1) mRNA, complete cds Length = 1866 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 632 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 681
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 36606 atttgaacttgcatgtttatggagtg 36581
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 37705 atttgaacttgcatgtttatggagtg 37730
>gb|AY072082.1| Arabidopsis thaliana At4g15850 mRNA sequence Length = 1865 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 630 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 679
>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4 Length = 205065 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 171149 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 171198
>emb|Y11154.1|ATDEADBLH Arabidopsis thaliana mRNA for DEAD box-like RNA helicase, partial Length = 1573 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 319 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 368
>emb|Y11187.1|AT23KB A.thaliana RH1, TC1, G14587-5, G14587-6, and PRL1 genes Length = 23918 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 208 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 257
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 96354 atttgaacttgcatgtttatggagtg 96379
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 60057 atttgaacttgcatgtttatggagtg 60032
>emb|AL662937.4|OSJN00140 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027G07, complete sequence Length = 179021 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 164960 atttgaacttgcatgtttatggagtg 164935
>emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 42 Length = 195068 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 128203 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 128252
>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence Length = 234778 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 tggagaagaactacaaggacac 85 |||||||||||||||||||||| Sbjct: 72055 tggagaagaactacaaggacac 72034
>gb|AC087542.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0073D04, complete sequence Length = 155372 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 92424 atttgaacttgcatgtttatggagtg 92399
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 22722860 atttgaacttgcatgtttatggagtg 22722835
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 3668934 atttgaacttgcatgtttatggagtg 3668909
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 14767275 atttgaacttgcatgtttatggagtg 14767250
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 23727250 atttgaacttgcatgtttatggagtg 23727225 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 30452230 gaagaacgtcaaggacacctccggcaagg 30452202
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 6410964 atttgaacttgcatgtttatggagtg 6410989 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 513 tttgaagttgcatgtttatggagtg 537 |||||| |||||||||||||||||| Sbjct: 27326681 tttgaacttgcatgtttatggagtg 27326657
>emb|BX826445.1|CNS0A3B1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1776 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 598 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 647
>emb|BX828250.1|CNS0A2ZB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1793 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 610 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 659
>emb|BX828160.1|CNS0A2X9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1789 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 595 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 644
>emb|BX827970.1|CNS0A2ZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZE10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1770 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 593 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 642
>emb|BX827963.1|CNS0A2Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1774 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 340 ttagtagcaacaccaggcaggctgttggaccatctgcaaaacaccaaggg 389 ||||||||||||||||| |||||| |||| ||| | | ||||||||||| Sbjct: 595 ttagtagcaacaccaggaaggctgatggatcatatcaacaacaccaaggg 644
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 67074 atttgaacttgcatgtttatggagtg 67049
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665D10 Length = 134967 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 33359 atttgaacttgcatgtttatggagtg 33384
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 5747 atttgaacttgcatgtttatggagtg 5722
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 37834 atttgaacttgcatgtttatggagtg 37809
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 14775516 atttgaacttgcatgtttatggagtg 14775491
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 512 atttgaagttgcatgtttatggagtg 537 ||||||| |||||||||||||||||| Sbjct: 3677628 atttgaacttgcatgtttatggagtg 3677603
>ref|XM_467615.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1012 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 342 gaagaacgtcaaggacacctccggcaagg 370
>ref|XM_506954.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0072H09.39 mRNA Length = 1021 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 351 gaagaacgtcaaggacacctccggcaagg 379
>emb|AL589993.5| Human DNA sequence from clone RP11-57K17 on chromosome 6 Contains the 3' end of the gene for serologically defined breast cancer antigen NY-BR-15 (LOC221312) and a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 24 (DDX24) pseudogene, complete sequence Length = 96246 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 tccgttccctcctccgaccctccat 202 ||||||||||||||| ||||||||| Sbjct: 37396 tccgttccctcctcctaccctccat 37372
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 gtttatggagtgcaaggatcg 546 ||||||||||||||||||||| Sbjct: 51540 gtttatggagtgcaaggatcg 51560
>gb|AC108162.4| Homo sapiens BAC clone RP11-686G17 from 4, complete sequence Length = 185624 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 ttccctcctccgaccctccat 202 ||||||||||||||||||||| Sbjct: 157832 ttccctcctccgaccctccat 157812
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 513 tttgaagttgcatgtttatggagtg 537 |||||| |||||||||||||||||| Sbjct: 9576 tttgaacttgcatgtttatggagtg 9552
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 513 tttgaagttgcatgtttatggagtg 537 |||||| |||||||||||||||||| Sbjct: 107198 tttgaacttgcatgtttatggagtg 107174
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 133090 gaagaacgtcaaggacacctccggcaagg 133062
>dbj|AP004888.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0617A09 Length = 134804 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 58278 gaagaacgtcaaggacacctccggcaagg 58250
>dbj|AK070160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046D09, full insert sequence Length = 1021 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 351 gaagaacgtcaaggacacctccggcaagg 379
>dbj|AK059941.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F08, full insert sequence Length = 1012 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 gaagaactacaaggacacctccggcaagg 96 ||||||| |||||||||||||||||||| Sbjct: 342 gaagaacgtcaaggacacctccggcaagg 370
>ref|XM_514761.1| PREDICTED: Pan troglodytes similar to Proteasome subunit alpha type 7 (Proteasome subunit RC6-1) (LOC458383), mRNA Length = 920 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 633 gagttcctggagaagaacta 652
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttat 531 |||||||||||||||||||| Sbjct: 29348 atttgaagttgcatgtttat 29367
>ref|XM_459222.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D18337g) partial mRNA Length = 1869 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 acacttttctgccaactatg 595 |||||||||||||||||||| Sbjct: 948 acacttttctgccaactatg 967
>gb|BC004427.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, transcript variant 1, mRNA (cDNA clone MGC:3755 IMAGE:2819923), complete cds Length = 967 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 581 gagttcctggagaagaacta 600
>ref|XM_915991.2| PREDICTED: Mus musculus RIKEN cDNA 4932431H17 gene (4932431H17Rik), mRNA Length = 1591 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tcctggagaagaactacaag 80 |||||||||||||||||||| Sbjct: 1446 tcctggagaagaactacaag 1465
>ref|XM_446026.1| Candida glabrata CBS138, CAGL0F01199g partial mRNA Length = 765 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 52 tgagggagttcctggagaagaactacaa 79 ||||||||||| ||||||| |||||||| Sbjct: 515 tgagggagttcttggagaaaaactacaa 542
>gb|BC014999.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7, mRNA (cDNA clone IMAGE:4851079), containing frame-shift errors Length = 798 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 591 gagttcctggagaagaacta 610
>emb|CR663983.2|CNS0FBAT Tetraodon nigroviridis full-length cDNA Length = 1468 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ttcctggagaagaactacaa 79 |||||||||||||||||||| Sbjct: 780 ttcctggagaagaactacaa 799
>ref|XM_671651.1| Plasmodium berghei strain ANKA hypothetical protein (PB000439.02.0) partial mRNA Length = 1230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 aatgcacactgtcataacta 494 |||||||||||||||||||| Sbjct: 115 aatgcacactgtcataacta 96
>emb|BX548015.15| Zebrafish DNA sequence from clone DKEY-18J14 in linkage group 1, complete sequence Length = 238174 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 agtaaaaatgtttataaaca 443 |||||||||||||||||||| Sbjct: 130303 agtaaaaatgtttataaaca 130284
>emb|AL078633.32|HS1005F21 Human DNA sequence from clone RP5-1005F21 on chromosome 20 Contains the PSMA7 gene for proteasome (prosome, macropain) subunit alpha type 7, the HRH3 gene for histamine receptor H3, the SS18L1 gene for synovial sarcoma translocation gene on chromosome 18-like 1, the GTPBP5 gene for GTP binding protein 5 (putative), the 3' end of the C20orf40 gene for a novel protein similar to Pleurodeles waltlii RAP55 protein and seven CpG islands, complete sequence Length = 100976 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 97422 gagttcctggagaagaacta 97441
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 acacttttctgccaactatg 595 |||||||||||||||||||| Sbjct: 1415150 acacttttctgccaactatg 1415169
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 tttcatatataagagactaa 409 |||||||||||||||||||| Sbjct: 129673 tttcatatataagagactaa 129654
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 52 tgagggagttcctggagaagaactacaa 79 ||||||||||| ||||||| |||||||| Sbjct: 124554 tgagggagttcttggagaaaaactacaa 124527
>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence Length = 176135 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gagcaagaccttggatttga 517 |||||||||||||||||||| Sbjct: 129092 gagcaagaccttggatttga 129111
>gb|BT007466.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, partial cds Length = 747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 508 gagttcctggagaagaacta 527
>gb|AC165057.2| Phakopsora pachyrhizi clone JGIAFNA-1561A7, complete sequence Length = 31405 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ggtttcatatataagagact 407 |||||||||||||||||||| Sbjct: 20840 ggtttcatatataagagact 20859
>gb|AC165054.1| Phakopsora pachyrhizi clone JGIAFNA-1345A14, complete sequence Length = 37601 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ggtttcatatataagagact 407 |||||||||||||||||||| Sbjct: 21319 ggtttcatatataagagact 21338
>gb|BT007165.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 mRNA, complete cds Length = 747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 508 gagttcctggagaagaacta 527
>emb|CR857931.1| Pongo pygmaeus mRNA; cDNA DKFZp469N104 (from clone DKFZp469N104) Length = 1056 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 561 gagttcctggagaagaacta 580
>emb|CR615593.1| full-length cDNA clone CS0DI074YF03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 900 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 539 gagttcctggagaagaacta 558
>gb|DQ397857.1| Cenarchaeum symbiosum clone C04D12, complete sequence Length = 40123 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 aaaaatgtttataaacacca 446 |||||||||||||||||||| Sbjct: 26122 aaaaatgtttataaacacca 26103
>dbj|AK127210.1| Homo sapiens cDNA FLJ45277 fis, clone BRHIP3001079, weakly similar to Proteasome subunit alpha type 7 (EC 3.4.99.46) Length = 3699 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 2358 gagttcctggagaagaacta 2377
>emb|CR624293.1| full-length cDNA clone CS0DF011YJ24 of Fetal brain of Homo sapiens (human) Length = 786 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 557 gagttcctggagaagaacta 576
>emb|CR621598.1| full-length cDNA clone CS0DC002YG05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 714 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 351 gagttcctggagaagaacta 370
>emb|CR622362.1| full-length cDNA clone CS0DM009YO06 of Fetal liver of Homo sapiens (human) Length = 889 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 618 gagttcctggagaagaacta 637
>emb|CR618955.1| full-length cDNA clone CS0DB003YC01 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 926 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 618 gagttcctggagaagaacta 637
>emb|CR616396.1| full-length cDNA clone CS0DC027YF09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 590 gagttcctggagaagaacta 609
>emb|CR611945.1| full-length cDNA clone CS0DK003YA15 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 973 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 643 gagttcctggagaagaacta 662
>gb|AC021698.12| Homo sapiens chromosome 11, clone RP11-430L3, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ttccctcctccgaccctcca 201 |||||||||||||||||||| Sbjct: 2892 ttccctcctccgaccctcca 2911
>emb|CR603718.1| full-length cDNA clone CS0DI042YM18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 953 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 590 gagttcctggagaagaacta 609
>emb|CR600945.1| full-length cDNA clone CS0DC026YF03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1023 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 730 gagttcctggagaagaacta 749
>emb|CR600734.1| full-length cDNA clone CS0DC018YO10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 984 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 622 gagttcctggagaagaacta 641
>emb|CR596694.1| full-length cDNA clone CS0DI011YL02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 815 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 607 gagttcctggagaagaacta 626
>gb|DQ407830.1| Ictalurus punctatus clone SEEB08 proteasome alpha 7 subunit mRNA, partial cds Length = 448 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ttcctggagaagaactacaa 79 |||||||||||||||||||| Sbjct: 85 ttcctggagaagaactacaa 104
>dbj|AK133299.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932431H17 product:hypothetical Glutamic acid-rich region profile containing protein, full insert sequence Length = 2789 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 tcctggagaagaactacaag 80 |||||||||||||||||||| Sbjct: 2069 tcctggagaagaactacaag 2088
>gb|AC079064.6| Homo sapiens chromosome 11, clone RP11-485O14, complete sequence Length = 164009 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttccctcctccgaccctcca 201 |||||||||||||||||||| Sbjct: 29743 ttccctcctccgaccctcca 29724
>gb|BC001895.1|BC001895 Homo sapiens, Similar to proteasome (prosome, macropain) subunit, alpha type, 7, clone IMAGE:3535769, mRNA Length = 805 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 596 gagttcctggagaagaacta 615
>ref|NM_002792.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), mRNA Length = 984 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 623 gagttcctggagaagaacta 642
>gb|AF054185.1|AF054185 Homo sapiens proteasome subunit HSPC mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 593 gagttcctggagaagaacta 612
>gb|AF130109.1|AF130109 Homo sapiens clone FLB5740 PRO1512 mRNA, complete cds Length = 1517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 1132 gagttcctggagaagaacta 1151
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 atttgaagttgcatgtttat 531 |||||||||||||||||||| Sbjct: 21436265 atttgaagttgcatgtttat 21436284
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agaccttggatttgaagttg 522 |||||||||||||||||||| Sbjct: 6431 agaccttggatttgaagttg 6412
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 agaccttggatttgaagttg 522 |||||||||||||||||||| Sbjct: 74309 agaccttggatttgaagttg 74290
>gb|AY892046.1| Synthetic construct Homo sapiens clone FLH024047.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 508 gagttcctggagaagaacta 527
>gb|AY892045.1| Synthetic construct Homo sapiens clone FLH024046.01L proteasome subunit alpha type 7 (PSMA7) mRNA, partial cds Length = 747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 508 gagttcctggagaagaacta 527
>gb|AY889591.1| Synthetic construct Homo sapiens clone FLH024051.01X proteasome subunit alpha type 7 (PSMA7) mRNA, complete cds Length = 747 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 508 gagttcctggagaagaacta 527
>emb|BX088579.5| Zebrafish DNA sequence from clone CH211-198C19 in linkage group 16, complete sequence Length = 214474 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tgtttataaacaccaagggt 451 |||||||||||||||||||| Sbjct: 53446 tgtttataaacaccaagggt 53427
>emb|AL954130.8| Zebrafish DNA sequence from clone CH211-214D1 in linkage group 16, complete sequence Length = 235236 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 tgtttataaacaccaagggt 451 |||||||||||||||||||| Sbjct: 32546 tgtttataaacaccaagggt 32527
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 tttataaacaccaagggttt 453 |||||||||||||||||||| Sbjct: 105101 tttataaacaccaagggttt 105082
>gb|AF022815.1|AF022815 Homo sapiens proteasome subunit XAPC7 mRNA, complete cds Length = 893 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 gagttcctggagaagaacta 76 |||||||||||||||||||| Sbjct: 532 gagttcctggagaagaacta 551
>emb|AL365476.1|LMFLUNK02 Leishmania major Friedlin cosmid clones L8382, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 28334 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tgagggagttcctggagaag 71 |||||||||||||||||||| Sbjct: 11947 tgagggagttcctggagaag 11928 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,962,176 Number of Sequences: 3902068 Number of extensions: 4962176 Number of successful extensions: 98083 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97160 Number of HSP's gapped (non-prelim): 923 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
