ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart15c10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002O16, full insert sequence Length = 1042 Score = 238 bits (120), Expect = 2e-59 Identities = 203/231 (87%) Strand = Plus / Plus Query: 280 atggacgccatcaagcaggcgctgatgctcttcctccacagcaagctcaccatgtgcccc 339 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 286 atggacgccgtcaagcaggcgctcctgctcttcgtccacagcaagctcaccatgtgcccc 345 Query: 340 gaccaccgcttcgccttctcctccctcggcgacaccgtctccttgctaagcaaagaattc 399 || ||||||||||||||| |||||||||||||||||||||||||| ||| || || ||| Sbjct: 346 gatcaccgcttcgccttcgcctccctcggcgacaccgtctccttggtaaagaaggatttc 405 Query: 400 accagtgatgctgcttcttcaattgagacaatccagtccctggctgctactgaaacgaga 459 | ||||||||||| |||| || | ||| ||||||| ||||||| ||| | ||||||||| Sbjct: 406 agcagtgatgctggttctgcagtggaggcaatccaatccctggatgcgtcggaaacgaga 465 Query: 460 tatgcagtggctgatctcactcagctcttncagatagcatacgaggaaggg 510 ||||| |||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 466 tatgcgatggctgatctcactcagctcttcaagatagcttaccaggaaggg 516 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 90 gttctcgctgccgccgagccgcctcccgctggaggacatcctcttctgcgtcgacgtcgg 149 |||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 93 gttcacgctgcagccgagccgcctcccgccggaggacatgctcttctgcgtcgacgtcga 152 Query: 150 cgccgaggcgcgctccgagatga 172 | ||| ||||||||||||||| Sbjct: 153 cctggagacgcgctccgagatga 175
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 161 bits (81), Expect = 3e-36 Identities = 99/105 (94%) Strand = Plus / Minus Query: 280 atggacgccatcaagcaggcgctgatgctcttcctccacagcaagctcaccatgtgcccc 339 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 2584864 atggacgccgtcaagcaggcgctcctgctcttcgtccacagcaagctcaccatgtgcccc 2584805 Query: 340 gaccaccgcttcgccttctcctccctcggcgacaccgtctccttg 384 || ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2584804 gatcaccgcttcgccttcgcctccctcggcgacaccgtctccttg 2584760 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 90 gttctcgctgccgccgagccgcctcccgctggaggacatcctcttctgcgtcgacgtcgg 149 |||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 2585057 gttcacgctgcagccgagccgcctcccgccggaggacatgctcttctgcgtcgacgtcga 2584998 Query: 150 cgccgaggcgcgctccgagatga 172 | ||| ||||||||||||||| Sbjct: 2584997 cctggagacgcgctccgagatga 2584975 Score = 93.7 bits (47), Expect = 6e-16 Identities = 97/114 (85%) Strand = Plus / Minus Query: 397 ttcaccagtgatgctgcttcttcaattgagacaatccagtccctggctgctactgaaacg 456 |||| ||||||||||| |||| || | ||| ||||||| ||||||| ||| | |||||| Sbjct: 2584418 ttcagcagtgatgctggttctgcagtggaggcaatccaatccctggatgcgtcggaaacg 2584359 Query: 457 agatatgcagtggctgatctcactcagctcttncagatagcatacgaggaaggg 510 |||||||| |||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 2584358 agatatgcgatggctgatctcactcagctcttcaagatagcttaccaggaaggg 2584305 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 8188226 tcctcctcctccgccggcgc 8188245
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 161 bits (81), Expect = 3e-36 Identities = 99/105 (94%) Strand = Plus / Minus Query: 280 atggacgccatcaagcaggcgctgatgctcttcctccacagcaagctcaccatgtgcccc 339 ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 40205 atggacgccgtcaagcaggcgctcctgctcttcgtccacagcaagctcaccatgtgcccc 40146 Query: 340 gaccaccgcttcgccttctcctccctcggcgacaccgtctccttg 384 || ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 40145 gatcaccgcttcgccttcgcctccctcggcgacaccgtctccttg 40101 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 90 gttctcgctgccgccgagccgcctcccgctggaggacatcctcttctgcgtcgacgtcgg 149 |||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 40398 gttcacgctgcagccgagccgcctcccgccggaggacatgctcttctgcgtcgacgtcga 40339 Query: 150 cgccgaggcgcgctccgagatga 172 | ||| ||||||||||||||| Sbjct: 40338 cctggagacgcgctccgagatga 40316 Score = 93.7 bits (47), Expect = 6e-16 Identities = 97/114 (85%) Strand = Plus / Minus Query: 397 ttcaccagtgatgctgcttcttcaattgagacaatccagtccctggctgctactgaaacg 456 |||| ||||||||||| |||| || | ||| ||||||| ||||||| ||| | |||||| Sbjct: 39759 ttcagcagtgatgctggttctgcagtggaggcaatccaatccctggatgcgtcggaaacg 39700 Query: 457 agatatgcagtggctgatctcactcagctcttncagatagcatacgaggaaggg 510 |||||||| |||||||||||||||||||||| ||||||| ||| |||||||| Sbjct: 39699 agatatgcgatggctgatctcactcagctcttcaagatagcttaccaggaaggg 39646
>gb|BT017864.1| Zea mays clone EL01N0512A05.c mRNA sequence Length = 1184 Score = 121 bits (61), Expect = 2e-24 Identities = 172/209 (82%) Strand = Plus / Plus Query: 280 atggacgccatcaagcaggcgctgatgctcttcctccacagcaagctcaccatgtgcccc 339 |||||||| ||| |||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 274 atggacgcggtcaggcaggcgctgttgctgttcgtccacagcaagctcaccatgtgccca 333 Query: 340 gaccaccgcttcgccttctcctccctcggcgacaccgtctccttgctaagcaaagaattc 399 || ||||||||||||||| ||||||||||||| || ||||| || | | || | ||| Sbjct: 334 gagcaccgcttcgccttcgcctccctcggcgagacgttctccatggtgaagaagggcttc 393 Query: 400 accagtgatgctgcttcttcaattgagacaatccagtccctggctgctactgaaacgaga 459 | ||||||||||| || |||| ||| ||||||| ||| || ||||| | ||||| ||| Sbjct: 394 agcagtgatgctggtttcgcaatggaggcaatccattccttgtctgcttcagaaacaaga 453 Query: 460 tatgcagtggctgatctcactcagctctt 488 ||||| |||||||||| || |||||||| Sbjct: 454 tatgctatggctgatctgacccagctctt 482 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 93 ctcgctgccgccgagccgcctcccgctggaggacatcctcttctgcgtcgacgtcggcgc 152 ||||||||||||| ||| ||||| ||||||||| ||||||||||||||||| | | Sbjct: 72 ctcgctgccgccggtccggctccccgcggaggacattctcttctgcgtcgacgttgacct 131 Query: 153 cgaggcgcgctccgagatgaaggtcgccgccgc 185 |||||| ||| ||||||||||| ||||||||| Sbjct: 132 cgaggcccgcgccgagatgaagtccgccgccgc 164
>gb|AY109270.1| Zea mays PCO088979 mRNA sequence Length = 1193 Score = 121 bits (61), Expect = 2e-24 Identities = 172/209 (82%) Strand = Plus / Plus Query: 280 atggacgccatcaagcaggcgctgatgctcttcctccacagcaagctcaccatgtgcccc 339 |||||||| ||| |||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 289 atggacgcggtcaggcaggcgctgctgctgttcgtccacagcaagctcaccatgtgccca 348 Query: 340 gaccaccgcttcgccttctcctccctcggcgacaccgtctccttgctaagcaaagaattc 399 || ||||||||||||||| ||||||||||||| || ||||| || | | || | ||| Sbjct: 349 gagcaccgcttcgccttcgcctccctcggcgagacgttctccatggtgaagaagggcttc 408 Query: 400 accagtgatgctgcttcttcaattgagacaatccagtccctggctgctactgaaacgaga 459 | ||||||||||| || |||| ||| ||||||| ||| || ||||| | ||||| ||| Sbjct: 409 agcagtgatgctggtttcgcaatggaggcaatccattccttgtctgcttcagaaacaaga 468 Query: 460 tatgcagtggctgatctcactcagctctt 488 ||||| |||||||||| || |||||||| Sbjct: 469 tatgctatggctgatctgacccagctctt 497 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 93 ctcgctgccgccgagccgcctcccgctggaggacatcctcttctgcgtcgacgtcggcgc 152 |||||||||||| ||||||||| ||||||||| ||||||||||||||||| | | Sbjct: 89 ctcgctgccgccagtccgcctccccgcggaggacattctcttctgcgtcgacgttgacct 148 Query: 153 cgaggcgcgctccgagatgaaggtcgccgccgc 185 |||||| ||| ||||||||||| ||||||||| Sbjct: 149 cgaggcccgcgccgagatgaagtccgccgccgc 181
>ref|XM_482018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 534 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctcgccgtcctcctcctccgccg 49 ||||||||||||||||||||||| Sbjct: 96 ctcgccgtcctcctcctccgccg 118
>ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative alcohol oxidase (OSJNBa0001K12.13), mRNA Length = 2271 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccggc 51 ||||||||||||||||||||||| Sbjct: 199 cgccgtcctcctcctccgccggc 177
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccggc 51 ||||||||||||||||||||||| Sbjct: 83830 cgccgtcctcctcctccgccggc 83808
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgccggc 51 ||||||||||||||||||||||| Sbjct: 17108506 cgccgtcctcctcctccgccggc 17108528 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 ccgccggcgcggccctggcggcgc 67 |||||||||||||| ||||||||| Sbjct: 13939779 ccgccggcgcggccatggcggcgc 13939802
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctcgccgtcctcctcctccgccg 49 ||||||||||||||||||||||| Sbjct: 17218231 ctcgccgtcctcctcctccgccg 17218253 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctccgccg 49 ||||||| |||||||||||||||| Sbjct: 22183140 tctcgccctcctcctcctccgccg 22183163
>emb|BX821267.1|CNS0AA4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZH05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 659 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 23 gcgtctcgccgtcctcctcctcc 45 ||||||||||||||||||||||| Sbjct: 20 gcgtctcgccgtcctcctcctcc 42
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctcgccgtcctcctcctccgccg 49 ||||||||||||||||||||||| Sbjct: 142086 ctcgccgtcctcctcctccgccg 142108
>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H03 Length = 189893 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 27 ctcgccgtcctcctcctccgccg 49 ||||||||||||||||||||||| Sbjct: 78856 ctcgccgtcctcctcctccgccg 78878
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgccggc 51 ||||||||||||||||||||||| Sbjct: 17117546 cgccgtcctcctcctccgccggc 17117568 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 ccgccggcgcggccctggcggcgc 67 |||||||||||||| ||||||||| Sbjct: 13947121 ccgccggcgcggccatggcggcgc 13947144
>ref|NM_185745.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 acggcgtctcgccgtcctcctcctcc 45 ||||| |||||||||||||||||||| Sbjct: 12 acggcctctcgccgtcctcctcctcc 37
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 24752 cgtcctcctcctccgccggcgc 24731
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 154680 cgtcctcctcctccgccggcgc 154701
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 gccggcgcggccctggcggcgc 67 |||||||||||||||||||||| Sbjct: 2470391 gccggcgcggccctggcggcgc 2470412
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 167906 cgtcctcctcctccgccggcgc 167885
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 28984611 cgtcctcctcctccgccggcgc 28984590 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ccttctcctccctcggcgaca 373 ||||||||||||||||||||| Sbjct: 9808343 ccttctcctccctcggcgaca 9808323
>ref|XM_743920.1| Aspergillus fumigatus Af293 metalloreductase (Afu7g04970) partial mRNA Length = 1902 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 ctgccgccgagccgcctcccgc 118 |||||||||||||||||||||| Sbjct: 1851 ctgccgccgagccgcctcccgc 1830
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 gccggcgcggccctggcggcgc 67 |||||||||||||||||||||| Sbjct: 48275 gccggcgcggccctggcggcgc 48296
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 gccggcgcggccctggcggcgc 67 |||||||||||||||||||||| Sbjct: 247261 gccggcgcggccctggcggcgc 247282
>emb|X05958.1|OCMHCR Rabbit mRNA for fast skeletal muscle myosin heavy chain (MHC) Length = 2136 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 295 caggcgctgatgctcttcctcc 316 |||||||||||||||||||||| Sbjct: 30 caggcgctgatgctcttcctcc 9
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 acggcgtctcgccgtcctcctcctcc 45 ||||| |||||||||||||||||||| Sbjct: 21729816 acggcctctcgccgtcctcctcctcc 21729841 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 6095549 cgtcctcctcctccgccggcg 6095529 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||| ||||||||||| Sbjct: 24530545 tcctcctcctcccccggcgcggcc 24530568
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 29076033 cgtcctcctcctccgccggcgc 29076012 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 ccttctcctccctcggcgaca 373 ||||||||||||||||||||| Sbjct: 9806464 ccttctcctccctcggcgaca 9806444
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cctcctcctccgccggcgcggc 56 |||||||||||||||||||||| Sbjct: 32334714 cctcctcctccgccggcgcggc 32334735 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 33786800 cgccgtcctcctcctccgcc 33786819 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 23553706 tctcgccgtcctcctcctcc 23553687 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 21111530 tcctcctcctccgccgccgcggcc 21111507
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 acggcgtctcgccgtcctcctcctcc 45 ||||| |||||||||||||||||||| Sbjct: 46999 acggcctctcgccgtcctcctcctcc 47024
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cctcctcctccgccggcgcggc 56 |||||||||||||||||||||| Sbjct: 14211 cctcctcctccgccggcgcggc 14232
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cctcctcctccgccggcgcggc 56 |||||||||||||||||||||| Sbjct: 66999 cctcctcctccgccggcgcggc 67020
>dbj|AK120534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128J17, full insert sequence Length = 1546 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 20 acggcgtctcgccgtcctcctcctcc 45 ||||| |||||||||||||||||||| Sbjct: 148 acggcctctcgccgtcctcctcctcc 173
>dbj|AK106139.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G07, full insert sequence Length = 1005 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 328 cgtcctcctcctccgccggcgc 349
>dbj|AK102605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098O18, full insert sequence Length = 1192 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 359 cgtcctcctcctccgccggcgc 380
>dbj|AK059834.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-B06, full insert sequence Length = 1134 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 cgtcctcctcctccgccggcgc 53 |||||||||||||||||||||| Sbjct: 378 cgtcctcctcctccgccggcgc 399
>ref|XM_474087.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1641 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 116 cgctggaggacatcctcttctgcgtcgacgtcg 148 ||||||| ||||||||| |||||||||||||| Sbjct: 1034 cgctggacgacatcctcccctgcgtcgacgtcg 1066
>ref|XM_468461.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2682 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 76 cgccgtcctcctcctccgccg 56
>ref|XM_466999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 338 cgccgtcctcctcctccgccg 358
>gb|DQ214886.1| Taeniopygia guttata clone 0061P0025F12 C2f protein-like mRNA, complete sequence Length = 950 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgcggccc 58 |||||||||||| |||||||||||| Sbjct: 67 tcctcctcctcctccggcgcggccc 43
>ref|NM_001031464.1| Gallus gallus bromodomain and PHD finger containing, 1 (BRPF1), mRNA Length = 3986 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cgccggcgcggccctggcggc 65 ||||||||||||||||||||| Sbjct: 329 cgccggcgcggccctggcggc 309
>ref|XM_477136.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 190 cgtcctcctcctccgccggcg 170
>ref|NM_175381.4| Mus musculus RIKEN cDNA 2700081O15 gene (2700081O15Rik), mRNA Length = 4242 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ctcgccgtcctcctcctccgccggc 51 |||||| |||||||||||||||||| Sbjct: 561 ctcgccctcctcctcctccgccggc 537
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 19417 cgtcctcctcctccgccgccgcggc 19393
>gb|BC059063.1| Mus musculus RIKEN cDNA 2700081O15 gene, mRNA (cDNA clone MGC:69897 IMAGE:6825195), complete cds Length = 4084 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ctcgccgtcctcctcctccgccggc 51 |||||| |||||||||||||||||| Sbjct: 775 ctcgccctcctcctcctccgccggc 751
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 acgccatcaagcaggcgctga 304 ||||||||||||||||||||| Sbjct: 796592 acgccatcaagcaggcgctga 796572
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 105591 cgtcctcctcctccgccgccgcggc 105567
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ctcgccgtcctcctcctccgccggc 51 |||||| |||||||||||||||||| Sbjct: 135559 ctcgccctcctcctcctccgccggc 135535
>gb|AC163276.4| Mus musculus chromosome 19, clone RP24-316F20, complete sequence Length = 169300 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 ctcgccgtcctcctcctccgccggc 51 |||||| |||||||||||||||||| Sbjct: 120478 ctcgccctcctcctcctccgccggc 120502
>emb|Z83933.1|CVZ83933 Chlorobium vibrioforme 15 kb genomic DNA fragment Length = 14648 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 caagcaggcgctgatgctctt 311 ||||||||||||||||||||| Sbjct: 5215 caagcaggcgctgatgctctt 5235
>emb|AJ851576.1| Gallus gallus mRNA for hypothetical protein, clone 8a18 Length = 3986 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cgccggcgcggccctggcggc 65 ||||||||||||||||||||| Sbjct: 329 cgccggcgcggccctggcggc 309
>gb|AC111654.6| Rattus norvegicus Chr BAC CH230-108G17 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231706 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 agatatgcagtggctgatctc 477 ||||||||||||||||||||| Sbjct: 143902 agatatgcagtggctgatctc 143922
>gb|AE005709.1| Caulobacter crescentus CB15 section 35 of 359 of the complete genome Length = 10538 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 cgccggcgcggccctggcggc 65 ||||||||||||||||||||| Sbjct: 2396 cgccggcgcggccctggcggc 2376
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 gccggcgcggccctggcggcg 66 ||||||||||||||||||||| Sbjct: 3249288 gccggcgcggccctggcggcg 3249268
>gb|BC096638.1| Mus musculus RIKEN cDNA 2700081O15 gene, mRNA (cDNA clone MGC:106440 IMAGE:6825382), complete cds Length = 4242 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ctcgccgtcctcctcctccgccggc 51 |||||| |||||||||||||||||| Sbjct: 561 ctcgccctcctcctcctccgccggc 537
>gb|BC096549.1| Mus musculus RIKEN cDNA 2700081O15 gene, mRNA (cDNA clone IMAGE:6852034), partial cds Length = 4047 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 27 ctcgccgtcctcctcctccgccggc 51 |||||| |||||||||||||||||| Sbjct: 375 ctcgccctcctcctcctccgccggc 351
>gb|DQ204738.1| Oryza sativa (indica cultivar-group) cultivar Surjamkuhi brown pericarp and seed coat (Rc) pseudogene, complete sequence Length = 6401 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 465 cgtcctcctcctccgccggcg 445
>gb|DQ204737.1| Oryza rufipogon cultivar IRGC105491 brown pericarp and seed coat (Rc) gene, complete cds Length = 6406 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 465 cgtcctcctcctccgccggcg 445
>gb|DQ204736.1| Oryza sativa (japonica cultivar-group) cultivar Jefferson brown pericarp and seed coat (Rc) pseudogene, complete sequence Length = 6429 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 509 cgtcctcctcctccgccggcg 489
>gb|DQ204735.1| Oryza sativa (japonica cultivar-group) cultivar H75 brown pericarp and seed coat (Rc) gene, complete cds Length = 6442 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 508 cgtcctcctcctccgccggcg 488
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 116 cgctggaggacatcctcttctgcgtcgacgtcg 148 ||||||| ||||||||| |||||||||||||| Sbjct: 32805398 cgctggacgacatcctcccctgcgtcgacgtcg 32805430 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 19431987 tcctcctcctccgccggcgc 19432006 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccgagccgcctcccgctg 120 |||||||||||||||||||| Sbjct: 18866348 cgccgagccgcctcccgctg 18866367
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 1887761 cgtcctcctcctccgccgccgcggc 1887737 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctccgccg 49 |||| ||||||||||||||||||| Sbjct: 17978910 tctccccgtcctcctcctccgccg 17978933
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 35353788 cgccgtcctcctcctccgccg 35353768 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 25831869 cgccgtcctcctcctccgccg 25831849 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 18546167 tcctcctcctccgccgccgcggcc 18546190
>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0013D02, complete sequence Length = 131883 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 ccttctcctccctcggcgaca 373 ||||||||||||||||||||| Sbjct: 66154 ccttctcctccctcggcgaca 66174
>gb|AY125050.1| Papio cynocephalus anubis immunoglobulin gamma-3 heavy chain constant region gene, partial cds Length = 1553 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 309 cttcctccacagcaagctcaccatg 333 ||||||| ||||||||||||||||| Sbjct: 1451 cttcctctacagcaagctcaccatg 1475
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 104122 cgccgtcctcctcctccgccg 104102
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcg 52 ||||||||||||||||||||| Sbjct: 150719 cgtcctcctcctccgccggcg 150699
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 78475 cgccgtcctcctcctccgccg 78455
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgccg 49 ||||||||||||||||||||| Sbjct: 14336 cgccgtcctcctcctccgccg 14316
>emb|Z54153.1|OSCHINDPR O.sativa mRNA for chilling-inducible protein Length = 1585 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 280 cgtcctcctcctccgccgccgcggc 256
>dbj|AK100283.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074O21, full insert sequence Length = 2002 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 116 cgctggaggacatcctcttctgcgtcgacgtcg 148 ||||||| ||||||||| |||||||||||||| Sbjct: 1232 cgctggacgacatcctcccctgcgtcgacgtcg 1264
>dbj|AK070934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064K13, full insert sequence Length = 1578 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 198 cgtcctcctcctccgccgccgcggc 174
>dbj|AK058901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A08, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 200 cgtcctcctcctccgccgccgcggc 176
>emb|AL732332.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F03, complete sequence Length = 91539 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 116 cgctggaggacatcctcttctgcgtcgacgtcg 148 ||||||| ||||||||| |||||||||||||| Sbjct: 78291 cgctggacgacatcctcccctgcgtcgacgtcg 78323
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 116 cgctggaggacatcctcttctgcgtcgacgtcg 148 ||||||| ||||||||| |||||||||||||| Sbjct: 395 cgctggacgacatcctcccctgcgtcgacgtcg 427
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcggc 56 |||||||||||||||||| |||||| Sbjct: 1885482 cgtcctcctcctccgccgccgcggc 1885458 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctccgccg 49 |||| ||||||||||||||||||| Sbjct: 18069326 tctccccgtcctcctcctccgccg 18069349
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 116 cgctggaggacatcctcttctgcgtcgacgtcg 148 ||||||| ||||||||| |||||||||||||| Sbjct: 67684 cgctggacgacatcctcccctgcgtcgacgtcg 67716
>gb|M22618.1|SMASHLAB Serratia marcescens (clone pES2) hemolysin (hlsB), and hemolysin determinant (hlsB) genes, complete cds Length = 7253 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 cgacgtcggcgccgaggcgcg 161 ||||||||||||||||||||| Sbjct: 2123 cgacgtcggcgccgaggcgcg 2103
>gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete sequence Length = 203498 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 151522 tcctcctcctccgccggcgc 151503
>ref|NM_128271.3| Arabidopsis thaliana lipid binding AT2G27130 mRNA, complete cds Length = 765 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 105 tctcgccgtcctcctcctcc 124
>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence Length = 40624 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 gcgtcgacgtcggcgccgag 156 |||||||||||||||||||| Sbjct: 21244 gcgtcgacgtcggcgccgag 21263
>ref|XM_465954.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2120 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 383 tcctcctcctccgccgccgcggcc 406
>ref|NM_190910.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 762 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 652 cgccgtcctcctcctccgcc 633
>ref|NM_193483.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 271 tcctcctcctccgccgccgcggcc 294
>ref|XM_479058.1| Oryza sativa (japonica cultivar-group), mRNA Length = 303 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||| ||||||||||| Sbjct: 70 tcctcctcctcccccggcgcggcc 47
>ref|XM_472317.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 561 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 353 tcctcctcctccgccggcgc 334
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctccgccg 49 |||| ||||||||||||||||||| Sbjct: 137538 tctccccgtcctcctcctccgccg 137561
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 ccgccggcgcggccctggcggcgc 67 |||||||||||||| ||||||||| Sbjct: 108405 ccgccggcgcggccatggcggcgc 108428
>gb|AC137694.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002B02, complete sequence Length = 148881 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctccgccg 49 |||| ||||||||||||||||||| Sbjct: 36017 tctccccgtcctcctcctccgccg 36040
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cgtcggcgccgaggcgcgct 163 |||||||||||||||||||| Sbjct: 1174236 cgtcggcgccgaggcgcgct 1174255
>ref|XM_959082.1| Neurospora crassa OR74A hypothetical protein (NCU03082.1) partial mRNA Length = 1578 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 atggacgccatcaagcaggc 299 |||||||||||||||||||| Sbjct: 658 atggacgccatcaagcaggc 677
>ref|XM_330517.1| Neurospora crassa OR74A hypothetical protein (NCU03082.1) partial mRNA Length = 1578 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 atggacgccatcaagcaggc 299 |||||||||||||||||||| Sbjct: 658 atggacgccatcaagcaggc 677
>gb|AY160083.1| Drosophila melanogaster alpha1U protein (na) gene, complete cds Length = 9176 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 183 tcctcctcctccgccggcgc 164
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ctggaggacatcctcttctg 137 |||||||||||||||||||| Sbjct: 52548 ctggaggacatcctcttctg 52567
>ref|XM_750846.1| Aspergillus fumigatus Af293 rRNA biogenesis protein (Afu2g16040) partial mRNA Length = 5469 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tcgccgtcctcctcctccgc 47 |||||||||||||||||||| Sbjct: 650 tcgccgtcctcctcctccgc 631
>ref|XM_850272.1| PREDICTED: Canis familiaris similar to WD-repeat protein 31 (LOC612541), mRNA Length = 1301 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ggcgacaccgtctccttgct 386 |||||||||||||||||||| Sbjct: 1197 ggcgacaccgtctccttgct 1216
>gb|AY454155.1| Chlamydomonas reinhardtii strain CC-2290 PF26 gene, partial cds and 3' UTR Length = 549 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcgg 55 ||||||||||||||| |||||||| Sbjct: 26 cgtcctcctcctccggcggcgcgg 3
>gb|AC015884.15| Homo sapiens chromosome 17, clone RP11-216P6, complete sequence Length = 207661 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 agatgaaggtcgccgccgcggtcg 190 |||||||| ||||||||||||||| Sbjct: 120049 agatgaagttcgccgccgcggtcg 120026
>gb|AC126680.4| Mus musculus BAC clone RP24-347B21 from chromosome 7, complete sequence Length = 161973 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 ctggaggacatcctcttctg 137 |||||||||||||||||||| Sbjct: 130656 ctggaggacatcctcttctg 130675
>ref|XM_723545.1| Plasmodium yoelii yoelii str. 17XNL virulence factor MVIN (PY07692) partial mRNA Length = 3592 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aggtcgccgccgcggtcgcg 192 |||||||||||||||||||| Sbjct: 1234 aggtcgccgccgcggtcgcg 1215
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 ctccgccggcgcggccctggcggc 65 |||||||||||||| ||||||||| Sbjct: 122232 ctccgccggcgcggtcctggcggc 122209
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 ctccgccggcgcggccctggcggc 65 |||||||||||||| ||||||||| Sbjct: 115524 ctccgccggcgcggtcctggcggc 115547
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 ctccgccggcgcggccctggcggc 65 |||||||||||||| ||||||||| Sbjct: 85588 ctccgccggcgcggtcctggcggc 85611
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccgagccgcctcccgctg 120 |||||||||||||||||||| Sbjct: 82258 cgccgagccgcctcccgctg 82277
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 85551 tcctcctcctccgccggcgc 85570
>emb|BX546446.15| Zebrafish DNA sequence from clone DKEY-7K24 in linkage group 6, complete sequence Length = 196818 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 atatgcagtggctgatctca 478 |||||||||||||||||||| Sbjct: 16551 atatgcagtggctgatctca 16532
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 gccggtcccggcgaactcgccggagttctcgc 97 |||| |||||||||||| ||||| |||||||| Sbjct: 3241430 gccgttcccggcgaactggccggtgttctcgc 3241461
>gb|AE006025.1| Caulobacter crescentus CB15 section 351 of 359 of the complete genome Length = 10596 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ggccctggcggcgccggtcccggc 77 ||||||||||||||||||| |||| Sbjct: 1048 ggccctggcggcgccggtcgcggc 1071
>gb|AE005694.1| Caulobacter crescentus CB15 section 20 of 359 of the complete genome Length = 14034 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gccggcgcggccctggcggc 65 |||||||||||||||||||| Sbjct: 2328 gccggcgcggccctggcggc 2347
>dbj|AB246330.1| Arabidopsis thaliana AtXYP11 mRNA for xylogen like protein 11, complete cds Length = 531 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 18 tctcgccgtcctcctcctcc 37
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 cgtcggcgccgaggcgcgctccga 167 |||||||||||||| ||||||||| Sbjct: 3758845 cgtcggcgccgaggagcgctccga 3758868
>ref|NM_167402.1| Drosophila melanogaster narrow abdomen CG1517-RC, transcript variant C (na), mRNA Length = 6447 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 120 tcctcctcctccgccggcgc 101
>ref|NM_167401.1| Drosophila melanogaster narrow abdomen CG1517-RB, transcript variant B (na), mRNA Length = 6591 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 120 tcctcctcctccgccggcgc 101
>gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map B68, complete sequence Length = 99345 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 94871 tctcgccgtcctcctcctcc 94890
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 aaggtcgccgccgcggtcgc 191 |||||||||||||||||||| Sbjct: 2237417 aaggtcgccgccgcggtcgc 2237398
>emb|CR406382.1| Gallus gallus finished cDNA, clone ChEST758f12 Length = 960 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 177 tcctcctcctccgccgtcgcggcc 154
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggc 51 |||||||||||||||||||| Sbjct: 16534017 cgtcctcctcctccgccggc 16533998
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gtcctcctcctccgccggcgcggc 56 ||||||||||||||||| |||||| Sbjct: 22394038 gtcctcctcctccgccgccgcggc 22394015
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aggtcgccgccgcggtcgcg 192 |||||||||||||||||||| Sbjct: 2440809 aggtcgccgccgcggtcgcg 2440790
>emb|BX821906.1|CNS0AA4A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 50 tctcgccgtcctcctcctcc 69
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 79075 tcctcctcctccgccgccgcggcc 79052
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 9039 tcctcctcctccgccgccgcggcc 9016
>gb|AY088619.1| Arabidopsis thaliana clone 8450 mRNA, complete sequence Length = 762 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 101 tctcgccgtcctcctcctcc 120
>gb|AF107264.1|AF107264 Rhizobium etli glutamate synthase large subunit (gltB) and glutamate synthase small subunit (gltD) genes, complete cds Length = 7195 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cgtcggcgccgaggcgcgctccga 167 |||||||||||||| ||||||||| Sbjct: 4307 cgtcggcgccgaggagcgctccga 4284
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ccgcttcgccttctcctccc 364 |||||||||||||||||||| Sbjct: 1399172 ccgcttcgccttctcctccc 1399153
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 25847 cgccgtcctcctcctccgcc 25866
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 16405 tctcgccgtcctcctcctcc 16386
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 139870 cgccgtcctcctcctccgcc 139889
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 117011 tctcgccgtcctcctcctcc 116992
>dbj|AP005619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624H09 Length = 158719 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 80589 tcctcctcctccgccggcgc 80608
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gtcctcctcctccgccggcgcggc 56 ||||||||||||||||| |||||| Sbjct: 30527 gtcctcctcctccgccgccgcggc 30504
>dbj|AK175860.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL22-48-D12 Length = 743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 76 tctcgccgtcctcctcctcc 95
>dbj|AK175855.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL22-47-M12 Length = 696 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 30 tctcgccgtcctcctcctcc 49
>dbj|AK175830.1| Arabidopsis thaliana mRNA for predicted GPI-anchored protein, complete cds, clone: RAFL22-43-L04 Length = 696 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctcc 45 |||||||||||||||||||| Sbjct: 30 tctcgccgtcctcctcctcc 49
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 87306 tcctcctcctccgccgccgcggcc 87329
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 tctcgccgtcctcctcctccgccg 49 ||||||| |||||||||||||||| Sbjct: 146103 tctcgccctcctcctcctccgccg 146126
>dbj|AK121340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120H23, full insert sequence Length = 3407 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 2859 cgccgtcctcctcctccgcc 2878
>dbj|AK120921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035D12, full insert sequence Length = 2120 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 383 tcctcctcctccgccgccgcggcc 406
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||| ||||||||||| Sbjct: 23839 tcctcctcctcccccggcgcggcc 23862
>dbj|AK111021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-G10, full insert sequence Length = 975 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tcctcctcctccgccggcgcggcc 57 |||||||||||||||| ||||||| Sbjct: 312 tcctcctcctccgccgccgcggcc 335
>dbj|AK109272.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-A08, full insert sequence Length = 620 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 316 cgccgtcctcctcctccgcc 297
>dbj|AK108987.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F08, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gtcctcctcctccgccggcgcggc 56 ||||||||||||||||| |||||| Sbjct: 713 gtcctcctcctccgccgccgcggc 736
>gb|AF104994.1|AF104994 Streptomyces coelicolor A3(2) periplasmic binding protein (atrA), permease (AtrB), ATP-binding protein (atrC), methyltransferase (metZ), signal peptidase, Ni-containing superoxide dismutase (sodN), puromycin N-acetyltransferase (pat), and geranyl transferase (gtr) genes, complete cds; and unknown genes Length = 8568 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 cttctgcgtcgacgtcggcg 151 |||||||||||||||||||| Sbjct: 2360 cttctgcgtcgacgtcggcg 2341
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cggcgcggccctggcggcgc 67 |||||||||||||||||||| Sbjct: 16628 cggcgcggccctggcggcgc 16647
>dbj|AK061108.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C06, full insert sequence Length = 1584 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 cgccgtcctcctcctccgcc 48 |||||||||||||||||||| Sbjct: 1026 cgccgtcctcctcctccgcc 1045
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 cgtcgacgtcggcgccgagg 157 |||||||||||||||||||| Sbjct: 37000 cgtcgacgtcggcgccgagg 37019
>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete sequence Length = 314743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctccgccggcgc 53 |||||||||||||||||||| Sbjct: 94407 tcctcctcctccgccggcgc 94388
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 cctccgccggcgcggccctggcgg 64 |||||||||| ||||||||||||| Sbjct: 1632243 cctccgccggtgcggccctggcgg 1632266
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aggtcgccgccgcggtcgcg 192 |||||||||||||||||||| Sbjct: 1665937 aggtcgccgccgcggtcgcg 1665918
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggc 51 |||||||||||||||||||| Sbjct: 16487250 cgtcctcctcctccgccggc 16487231
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cgtcctcctcctccgccggc 51 |||||||||||||||||||| Sbjct: 39773 cgtcctcctcctccgccggc 39792
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ccgcttcgccttctcctccc 364 |||||||||||||||||||| Sbjct: 1076167 ccgcttcgccttctcctccc 1076148
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 tcgccgtcctcctcctccgccggc 51 ||||||||||||||| |||||||| Sbjct: 3227882 tcgccgtcctcctccaccgccggc 3227905
>gb|M32690.1|BIM127 Bovine immunodeficiency-like virus, complete proviral genome Length = 8482 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ccgtcctcctcctccgccgg 50 |||||||||||||||||||| Sbjct: 7714 ccgtcctcctcctccgccgg 7695
>gb|M74712.1|BIMREV Bovine immunodeficiency-like virus Rev protein 1 (rev1) and Rev protein 2 (rev2) mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ccgtcctcctcctccgccgg 50 |||||||||||||||||||| Sbjct: 512 ccgtcctcctcctccgccgg 493
>gb|M87526.1|CRERSP4A Chlamydomonas reinhardtii flagellar radial spoke protein (RSP4) and RSP6) genes, complete cds Length = 7707 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 32 cgtcctcctcctccgccggcgcgg 55 ||||||||||||||| |||||||| Sbjct: 6936 cgtcctcctcctccggcggcgcgg 6913 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,296,163 Number of Sequences: 3902068 Number of extensions: 4296163 Number of successful extensions: 107850 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103106 Number of HSP's gapped (non-prelim): 4744 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
