>KDPE_ECOLI (P21866) KDP operon transcriptional regulatory protein kdpE|
          Length = 225

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
 Frame = +2

Query: 365 LHHWVAVPYYALKKSQSSDAQKVPAMIKGNDGVCKRSLTQYFGLG--------SETRHTA 520
           L  W AVP   L  ++S ++ K+ A+  G D      L++ FG+G        +  RH+A
Sbjct: 67  LRQWSAVPVIVLS-ARSEESDKIAALDAGADDY----LSKPFGIGELQARLRVALRRHSA 121

Query: 521 TWVPDP 538
           T  PDP
Sbjct: 122 TTAPDP 127

>TOR1A_MOUSE (Q9ER39) Torsin A precursor (Torsin family 1 member A) (Dystonia 1|
           protein)
          Length = 333

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +2

Query: 302 KSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSSDAQKVPAMIKGNDGVCKRSL 478
           K+F ++++ EN     L+  Y+H +VA  ++    + +    ++   I+GN   C RS+
Sbjct: 109 KNFASKIIAENIYEGGLNSDYVHLFVATLHFPHASNITQYKDQLQMWIRGNVSACARSI 167

>XGPT_DESPS (Q6AQG4) Xanthine phosphoribosyltransferase (EC 2.4.2.22)|
           (Xanthine-guanine phosphoribosyltransferase) (XGPRT)
          Length = 160

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -2

Query: 373 VMQVSLMERDRDPVLIDDLCIKALDCKVASGEVDIM 266
           ++  +++ R+ D  LID +CI + D K   GE DI+
Sbjct: 44  MVPAAIIARELDIHLIDTICISSYDWKEKKGEADIL 79

>TOR1A_CRICR (Q9ERA9) Torsin A (Torsin family 1 member A) (Dystonia 1 protein)|
           (Fragment)
          Length = 273

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +2

Query: 302 KSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSSDAQKVPAMIKGNDGVCKRSL 478
           K+F ++++ EN     L+  Y+H +VA  ++    + +    ++   I+GN   C RS+
Sbjct: 62  KNFASKIIAENIYEGGLNSDYVHLFVATLHFPHASNVTLYKDQLQMWIRGNVSACARSI 120

>TOR1A_MACFA (Q60HG2) Torsin A precursor (Torsin family 1 member A) (Dystonia 1|
           protein)
          Length = 332

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +2

Query: 302 KSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSSDAQKVPAMIKGNDGVCKRSL 478
           K+F ++++ EN     L+  Y+H +VA  ++    + +    ++   I+GN   C RS+
Sbjct: 108 KNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSI 166

>TOR1A_HUMAN (O14656) Torsin A precursor (Torsin family 1 member A) (Dystonia 1|
           protein)
          Length = 332

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +2

Query: 302 KSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSSDAQKVPAMIKGNDGVCKRSL 478
           K+F ++++ EN     L+  Y+H +VA  ++    + +    ++   I+GN   C RS+
Sbjct: 108 KNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSI 166

>PTH_STRP8 (Q8P327) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 189

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/86 (22%), Positives = 33/86 (38%)
 Frame = +2

Query: 239 PGSVSNKYYHDVDFPRGHLAVKSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSS 418
           PGS   K  H++ F      VK+ D    D+      +  T+++H      Y +K     
Sbjct: 11  PGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINH---EKVYFVK----- 62

Query: 419 DAQKVPAMIKGNDGVCKRSLTQYFGL 496
                P     N G+  ++L  Y+ +
Sbjct: 63  -----PTTFMNNSGIAVKALLTYYNI 83

>PTH_STRP6 (Q5XEM3) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 189

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/86 (22%), Positives = 33/86 (38%)
 Frame = +2

Query: 239 PGSVSNKYYHDVDFPRGHLAVKSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSS 418
           PGS   K  H++ F      VK+ D    D+      +  T+++H      Y +K     
Sbjct: 11  PGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINH---EKVYFVK----- 62

Query: 419 DAQKVPAMIKGNDGVCKRSLTQYFGL 496
                P     N G+  ++L  Y+ +
Sbjct: 63  -----PTTFMNNSGIAVKALLTYYNI 83

>PTH_STRP1 (Q9A206) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 189

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/86 (22%), Positives = 33/86 (38%)
 Frame = +2

Query: 239 PGSVSNKYYHDVDFPRGHLAVKSFDAEVVDENGVPVPLHETYLHHWVAVPYYALKKSQSS 418
           PGS   K  H++ F      VK+ D    D+      +  T+++H      Y +K     
Sbjct: 11  PGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINH---EKVYFVK----- 62

Query: 419 DAQKVPAMIKGNDGVCKRSLTQYFGL 496
                P     N G+  ++L  Y+ +
Sbjct: 63  -----PTTFMNNSGIAVKALLTYYNI 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,986,607
Number of Sequences: 219361
Number of extensions: 1327227
Number of successful extensions: 3559
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3559
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)