ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart15b01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107128.1| Zea mays PCO069400 mRNA sequence Length = 1375 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 385 ctctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtc 444 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || Sbjct: 372 ctctacttcccatatgagcccggcaagcaagtccggagcgcggtcaggatcaagaacatc 431 Query: 445 agcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttcatgagg 504 ||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||| Sbjct: 432 agcaagtcccatgtggccttcaagttccaaacgactgcaccaaagagttgcttcatgagg 491 Query: 505 cctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaagtttgtc 564 ||||| ||||| | ||||||||||| |||| ||||||||| ||||| ||||||||||| Sbjct: 492 cctccgggcggtgtgcttgctccaggggaaagcatcatagcaacagttttcaagtttgtg 551 Query: 565 gagca 569 ||||| Sbjct: 552 gagca 556
>ref|XM_507128.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1368_G08.30 mRNA Length = 1288 Score = 228 bits (115), Expect = 2e-56 Identities = 217/251 (86%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 307 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 366 Query: 379 tcaaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaag 438 || || |||| |||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 367 tccaagctcttcttcccttatgagcctgggaagcaagtccggagtgctgtcaagatcaag 426 Query: 439 aacgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttc 498 ||| |||||||||| ||||| || || |||||||||||||| ||||| ||||| |||||| Sbjct: 427 aacatcagcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttc 486 Query: 499 atgaggcctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaag 558 ||||||||||| || || ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 487 atgaggcctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaag 546 Query: 559 tttgtcgagca 569 ||||| ||||| Sbjct: 547 tttgtggagca 557
>ref|XM_480030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1285 Score = 228 bits (115), Expect = 2e-56 Identities = 217/251 (86%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 317 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 376 Query: 379 tcaaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaag 438 || || |||| |||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 377 tccaagctcttcttcccttatgagcctgggaagcaagtccggagtgctgtcaagatcaag 436 Query: 439 aacgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttc 498 ||| |||||||||| ||||| || || |||||||||||||| ||||| ||||| |||||| Sbjct: 437 aacatcagcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttc 496 Query: 499 atgaggcctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaag 558 ||||||||||| || || ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 497 atgaggcctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaag 556 Query: 559 tttgtcgagca 569 ||||| ||||| Sbjct: 557 tttgtggagca 567
>dbj|AK058337.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D04, full insert sequence Length = 1285 Score = 228 bits (115), Expect = 2e-56 Identities = 217/251 (86%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 317 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 376 Query: 379 tcaaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaag 438 || || |||| |||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 377 tccaagctcttcttcccttatgagcctgggaagcaagtccggagtgctgtcaagatcaag 436 Query: 439 aacgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttc 498 ||| |||||||||| ||||| || || |||||||||||||| ||||| ||||| |||||| Sbjct: 437 aacatcagcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttc 496 Query: 499 atgaggcctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaag 558 ||||||||||| || || ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 497 atgaggcctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaag 556 Query: 559 tttgtcgagca 569 ||||| ||||| Sbjct: 557 tttgtggagca 567
>dbj|AK067917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123E21, full insert sequence Length = 1287 Score = 212 bits (107), Expect = 9e-52 Identities = 216/251 (86%), Gaps = 1/251 (0%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 306 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 365 Query: 379 tcaaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaag 438 || || |||| |||||| ||||||||||| |||||||||||||| || || | ||||||| Sbjct: 366 tccaagctcttcttcccttatgagcctgggaagcaagtccggagtgctgtcaagatcaag 425 Query: 439 aacgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttc 498 ||| |||||||||| ||||| || || |||||||||||||| ||||| ||||| |||||| Sbjct: 426 aacatcagcaagtctcatgtagcatttaagttccaaacaacagcaccgaagagttgcttc 485 Query: 499 atgaggcctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaag 558 ||| ||||||| || || ||||||||||||||||| | |||||||||||||||||||||| Sbjct: 486 atg-ggcctccaggtggtatacttgctccaggagagagcatcatagctacagtgttcaag 544 Query: 559 tttgtcgagca 569 ||||| ||||| Sbjct: 545 tttgtggagca 555
>ref|XM_478696.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1173 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 445 agcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttcatgagg 504 |||||||| ||||| || || |||||||||||||| ||||| ||||||||||||||| | Sbjct: 396 agcaagtctcatgtagcatttaagttccaaacaactgcacccaagagctgcttcatgcgt 455 Query: 505 cctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaagtttgtc 564 |||||||| | ||||||||| || || || ||||||||||| || || |||||||||||| Sbjct: 456 cctcctggagccatacttgcccctggggagaccatcatagcaactgttttcaagtttgtc 515 Query: 565 gagcaccc 572 |||||||| Sbjct: 516 gagcaccc 523
>dbj|AK100986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145E05, full insert sequence Length = 1173 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 445 agcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttcatgagg 504 |||||||| ||||| || || |||||||||||||| ||||| ||||||||||||||| | Sbjct: 396 agcaagtctcatgtagcatttaagttccaaacaactgcacccaagagctgcttcatgcgt 455 Query: 505 cctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaagtttgtc 564 |||||||| | ||||||||| || || || ||||||||||| || || |||||||||||| Sbjct: 456 cctcctggagccatacttgcccctggggagaccatcatagcaactgttttcaagtttgtc 515 Query: 565 gagcaccc 572 |||||||| Sbjct: 516 gagcaccc 523
>dbj|AK059370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E12, full insert sequence Length = 1741 Score = 119 bits (60), Expect = 1e-23 Identities = 111/128 (86%) Strand = Plus / Plus Query: 445 agcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttcatgagg 504 |||||||| ||||| || || |||||||||||||| ||||| ||||||||||||||| | Sbjct: 961 agcaagtctcatgtagcatttaagttccaaacaactgcacccaagagctgcttcatgcgt 1020 Query: 505 cctcctggcggcatacttgctccaggagaaaccatcatagctacagtgttcaagtttgtc 564 |||||||| | ||||||||| || || || ||||||||||| || || |||||||||||| Sbjct: 1021 cctcctggagccatacttgcccctggggagaccatcatagcaactgttttcaagtttgtc 1080 Query: 565 gagcaccc 572 |||||||| Sbjct: 1081 gagcaccc 1088
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 462 gttcaagttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatact 521 |||| ||||||||||||| ||||| ||||| ||||||||||||||||| || || ||||| Sbjct: 2300773 gttctagttccaaacaacagcaccgaagagttgcttcatgaggcctccaggtggtatact 2300832 Query: 522 tgctccaggagaaaccatcatagctacag 550 |||||||||||| | |||||||||||||| Sbjct: 2300833 tgctccaggagagagcatcatagctacag 2300861 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtcccatg 457 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| |||| Sbjct: 2300314 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtctcatg 2300373 Query: 458 t 458 | Sbjct: 2300374 t 2300374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtc 452 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| Sbjct: 9972257 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtc 9972203 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 467 agttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 ||||||||| ||| ||||||||||| |||||||||| ||||| | |||||||||| Sbjct: 9971753 agttccaaagaacagcaccaaagagttgcttcatgaaacctccagctggcatacttg 9971697 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 25782060 tctgctggtgctggtgctgca 25782040 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 18426839 tctgctggtgctggtgctgca 18426819 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 2299781 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 2299840 Query: 379 tcaaaactctacttccc 395 || || |||| |||||| Sbjct: 2299841 tccaagctcttcttccc 2299857
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 462 gttcaagttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatact 521 |||| ||||||||||||| ||||| ||||| ||||||||||||||||| || || ||||| Sbjct: 48272 gttctagttccaaacaacagcaccgaagagttgcttcatgaggcctccaggtggtatact 48331 Query: 522 tgctccaggagaaaccatcatagctacag 550 |||||||||||| | |||||||||||||| Sbjct: 48332 tgctccaggagagagcatcatagctacag 48360 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtcccatg 457 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| |||| Sbjct: 47813 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtctcatg 47872 Query: 458 t 458 | Sbjct: 47873 t 47873 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 47280 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 47339 Query: 379 tcaaaactctacttccc 395 || || |||| |||||| Sbjct: 47340 tccaagctcttcttccc 47356
>dbj|AP003911.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1368_G08 Length = 107074 Score = 105 bits (53), Expect = 2e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 462 gttcaagttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatact 521 |||| ||||||||||||| ||||| ||||| ||||||||||||||||| || || ||||| Sbjct: 98900 gttctagttccaaacaacagcaccgaagagttgcttcatgaggcctccaggtggtatact 98959 Query: 522 tgctccaggagaaaccatcatagctacag 550 |||||||||||| | |||||||||||||| Sbjct: 98960 tgctccaggagagagcatcatagctacag 98988 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtcccatg 457 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| |||| Sbjct: 98441 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtctcatg 98500 Query: 458 t 458 | Sbjct: 98501 t 98501 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 319 ggcgccgcggctatacggtcgctgctgcctaccaggcggcgactgcggctcgacccgcca 378 |||||||||| || ||||||||||| || ||| | || || || || |||||||||||| Sbjct: 97908 ggcgccgcggtgatccggtcgctgctccccacccgccgccgcctccgcctcgacccgcca 97967 Query: 379 tcaaaactctacttccc 395 || || |||| |||||| Sbjct: 97968 tccaagctcttcttccc 97984
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 467 agttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttgctc 526 ||||||||||||| ||||| ||||||||||||||| | |||||||| | ||||||||| | Sbjct: 22282226 agttccaaacaactgcacccaagagctgcttcatgcgtcctcctggagccatacttgccc 22282285 Query: 527 caggagaaaccatcatagc 545 | || || ||||||||||| Sbjct: 22282286 ctggggagaccatcatagc 22282304 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 547 acagtgttcaagtttgtcgagcaccc 572 ||||| |||||||||||||||||||| Sbjct: 22282402 acagttttcaagtttgtcgagcaccc 22282427 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgc 171 |||||||||||||||||||| Sbjct: 17063354 tctgctggtgctggtgctgc 17063335
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 467 agttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttgctc 526 ||||||||||||| ||||| ||||||||||||||| | |||||||| | ||||||||| | Sbjct: 87472 agttccaaacaactgcacccaagagctgcttcatgcgtcctcctggagccatacttgccc 87531 Query: 527 caggagaaaccatcatagc 545 | || || ||||||||||| Sbjct: 87532 ctggggagaccatcatagc 87550 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 547 acagtgttcaagtttgtcgagcaccc 572 ||||| |||||||||||||||||||| Sbjct: 87648 acagttttcaagtttgtcgagcaccc 87673
>ref|NM_116745.2| Arabidopsis thaliana structural molecule AT4G05060 mRNA, complete cds Length = 1207 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 380 caaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaaga 439 ||||||| |||||||| ||||||||||| ||||||||| |||| || | | ||| |||| Sbjct: 480 caaaactttacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaaga 539 Query: 440 acgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttca 499 | |||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||||| Sbjct: 540 atacgagcaagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttca 599 Query: 500 tg 501 || Sbjct: 600 tg 601
>gb|AY143842.1| Arabidopsis thaliana At4g05060/T32N4_12 mRNA, complete cds Length = 864 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 380 caaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaaga 439 ||||||| |||||||| ||||||||||| ||||||||| |||| || | | ||| |||| Sbjct: 317 caaaactttacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaaga 376 Query: 440 acgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttca 499 | |||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||||| Sbjct: 377 atacgagcaagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttca 436 Query: 500 tg 501 || Sbjct: 437 tg 438
>gb|AY094468.1| Arabidopsis thaliana AT4g05060/T32N4_12 mRNA, complete cds Length = 1208 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 380 caaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaaga 439 ||||||| |||||||| ||||||||||| ||||||||| |||| || | | ||| |||| Sbjct: 480 caaaactttacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaaga 539 Query: 440 acgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttca 499 | |||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||||| Sbjct: 540 atacgagcaagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttca 599 Query: 500 tg 501 || Sbjct: 600 tg 601
>gb|AY087509.1| Arabidopsis thaliana clone 36198 mRNA, complete sequence Length = 1073 Score = 75.8 bits (38), Expect = 1e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 380 caaaactctacttcccatatgagcctggcaagcaagtccggagcgcggtgaggatcaaga 439 ||||||| |||||||| ||||||||||| ||||||||| |||| || | | ||| |||| Sbjct: 382 caaaactttacttcccttatgagcctgggaagcaagtcaggagtgccattaagattaaga 441 Query: 440 acgtcagcaagtcccatgtggcgttcaagttccaaacaacggcaccaaagagctgcttca 499 | |||||||| ||||| ||||| ||||| |||||||| | ||||||||| ||||||| Sbjct: 442 atacgagcaagtcacatgtagcgtttaagtttcaaacaacagtaccaaagagttgcttca 501 Query: 500 tg 501 || Sbjct: 502 tg 503
>ref|XM_481114.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1855 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtc 452 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| Sbjct: 1371 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtc 1425
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtc 452 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| Sbjct: 12159 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtc 12105 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 467 agttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 ||||||||| ||| ||||||||||| |||||||||| ||||| | |||||||||| Sbjct: 11655 agttccaaagaacagcaccaaagagttgcttcatgaaacctccagctggcatacttg 11599
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtc 452 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| Sbjct: 119504 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtc 119450 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Minus Query: 467 agttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 ||||||||| ||| ||||||||||| |||||||||| ||||| | |||||||||| Sbjct: 119000 agttccaaagaacagcaccaaagagttgcttcatgaaacctccagctggcatacttg 118944
>dbj|AK067503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L16, full insert sequence Length = 1855 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 398 atgagcctggcaagcaagtccggagcgcggtgaggatcaagaacgtcagcaagtc 452 |||||||||| |||||||||||||| || || | |||||||||| |||||||||| Sbjct: 1371 atgagcctgggaagcaagtccggagtgctgtcaagatcaagaacatcagcaagtc 1425
>ref|XM_779783.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8209-PA (LOC579681), mRNA Length = 1302 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcagggggct 179 |||||||||||||||||||||||||| Sbjct: 771 tgctggtgctggtgctgcagggggct 746
>gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037B06 map near 50283S, complete sequence Length = 149398 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 468 gttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 |||||||| ||| ||||||||||| |||||||| | ||||| || |||||||||| Sbjct: 74538 gttccaaataacagcaccaaagagttgcttcataaaacctccaggtggcatacttg 74483
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 468 gttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 |||||||| ||| ||||||||||| |||||||| | ||||| || |||||||||| Sbjct: 14661267 gttccaaataacagcaccaaagagttgcttcataaaacctccaggtggcatacttg 14661322
>dbj|AK066853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077F22, full insert sequence Length = 2522 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 468 gttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 |||||||| ||| ||||||||||| |||||||| | ||||| || |||||||||| Sbjct: 1507 gttccaaataacagcaccaaagagttgcttcataaaacctccaggtggcatacttg 1562
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 468 gttccaaacaacggcaccaaagagctgcttcatgaggcctcctggcggcatacttg 523 |||||||| ||| ||||||||||| |||||||| | ||||| || |||||||||| Sbjct: 14742179 gttccaaataacagcaccaaagagttgcttcataaaacctccaggtggcatacttg 14742234
>gb|L38744.1|PS30129E Pisolithus tinctorius (F00010) mRNA, EST0129 Length = 351 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Plus Query: 454 catgtggcgttcaagttccaaacaacggcaccaaagagctgcttcatgaggcctcc 509 ||||| || ||||||||||||||||| || || ||||| |||| |||| ||||||| Sbjct: 16 catgtagcattcaagttccaaacaactgcccccaagagttgctacatgcggcctcc 71
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 320 gcgccgcggctatacggtcgctgctgcctac 350 ||||||||||||| ||||||| ||||||||| Sbjct: 1799588 gcgccgcggctattcggtcgccgctgcctac 1799558
>ref|NM_124791.2| Arabidopsis thaliana ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule AT5G54110 (ATMAMI) mRNA, complete cds Length = 1177 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 aagttccaaacaacggcaccaaagag 491 |||||||||||||||||||| ||||| Sbjct: 476 aagttccaaacaacggcacctaagag 501
>gb|AF528565.1| Zea mays cultivar BSSS53 chromosome 4 clone BAC 072, complete sequence Length = 106246 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 gctggtgctggtgctgcagggg 176 |||||||||||||||||||||| Sbjct: 52454 gctggtgctggtgctgcagggg 52433
>emb|AL158154.28| Human DNA sequence from clone RP11-383M4 on chromosome 9 Contains two novel genes and three putative novel pseudogenes, complete sequence Length = 189319 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 attcttcttcctcgacctccac 69 |||||||||||||||||||||| Sbjct: 73889 attcttcttcctcgacctccac 73868
>gb|AC133492.10| Rattus norvegicus clone rp32-478o16, complete sequence Length = 170268 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 gagcagcaagagggaggcgacgacgc 220 |||||||||||||||| ||||||||| Sbjct: 132715 gagcagcaagagggagacgacgacgc 132690
>dbj|AK221411.1| Arabidopsis thaliana mRNA for membrane associated protein, partial cds, clone: RAFL03-05-C07 Length = 768 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 aagttccaaacaacggcaccaaagag 491 |||||||||||||||||||| ||||| Sbjct: 402 aagttccaaacaacggcacctaagag 427
>emb|BX841749.1|CNS09YJR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZG03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1042 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 aagttccaaacaacggcaccaaagag 491 |||||||||||||||||||| ||||| Sbjct: 402 aagttccaaacaacggcacctaagag 427
>gb|U83655.1|ATU83655 Arabidopsis thaliana membrane associated protein mRNA, complete cds Length = 1182 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 aagttccaaacaacggcaccaaagag 491 |||||||||||||||||||| ||||| Sbjct: 470 aagttccaaacaacggcacctaagag 495
>ref|XM_469046.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3558 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 1060 tctgctggtgctggtgctgca 1040
>ref|NM_196659.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBa0012D19.20), mRNA Length = 4095 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 202 tctgctggtgctggtgctgca 182
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 25243 tctgctggtgctggtgctgca 25223
>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19, complete sequence Length = 153276 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 109961 tctgctggtgctggtgctgca 109981
>ref|NM_080616.1| Homo sapiens chromosome 20 open reading frame 112 (C20orf112), mRNA Length = 2100 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ctgctggtgctggtgctgcaggggg 177 |||||||||||||||||| |||||| Sbjct: 1232 ctgctggtgctggtgctggaggggg 1208
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 25129267 tctgctggtgctggtgctgca 25129247
>ref|NM_001032680.1| Takifugu rubripes Tuple1/HirA (LOC446054), mRNA Length = 3078 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcag 173 ||||||||||||||||||||| Sbjct: 2024 ctgctggtgctggtgctgcag 2044
>gb|AC125458.3| Mus musculus BAC clone RP24-236M19 from chromosome 19, complete sequence Length = 184015 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 31 caccccgccccaataatattcttcttcct 59 ||||||||||| ||||| ||||||||||| Sbjct: 141499 caccccgcccccataatcttcttcttcct 141471
>gb|AC093376.5| Homo sapiens BAC clone RP11-147A22 from 7, complete sequence Length = 176162 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 ccaccgcaccccgccccaataatattctt 53 ||||||||||||||||| ||||| ||||| Sbjct: 115320 ccaccgcaccccgccccgataatgttctt 115348
>emb|AL034550.31|HS1184F4 Human DNA sequence from clone RP5-1184F4 on chromosome 20q11.1-11.23 Contains the 3' end of the ASXL1 gene for additional sex combs like 1 (Drosophila), the C20orf112 gene for a novel protein similar to nucleolar protein 4 (NOL4), a novel gene and three CpG islands, complete sequence Length = 118873 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcaggggg 177 |||||||||||||||||| |||||| Sbjct: 12506 ctgctggtgctggtgctggaggggg 12530
>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete sequence Length = 170020 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 161074 tctgctggtgctggtgctgca 161054
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tgctggtgctggtgctgcagg 174 ||||||||||||||||||||| Sbjct: 399968 tgctggtgctggtgctgcagg 399988
>emb|CR857061.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0335 (from clone DKFZp469C0335) Length = 1878 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ctgctggtgctggtgctgcaggggg 177 |||||||||||||||||| |||||| Sbjct: 1289 ctgctggtgctggtgctggaggggg 1265
>emb|CR621375.1| full-length cDNA clone CS0DC003YE02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1759 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ctgctggtgctggtgctgcaggggg 177 |||||||||||||||||| |||||| Sbjct: 1414 ctgctggtgctggtgctggaggggg 1390
>gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, complete sequence Length = 167746 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 cctgtggcggagggaggagcc 294 ||||||||||||||||||||| Sbjct: 72770 cctgtggcggagggaggagcc 72790
>dbj|AK056286.1| Homo sapiens cDNA FLJ31724 fis, clone NT2RI2006703, moderately similar to Homo sapiens nolp mRNA Length = 2100 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 ctgctggtgctggtgctgcaggggg 177 |||||||||||||||||| |||||| Sbjct: 1232 ctgctggtgctggtgctggaggggg 1208
>dbj|AB195817.1| Coprinopsis cinerea dst1 gene for hypothetical protein, complete cds Length = 5488 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 cctctgctggtgctggtgctg 170 ||||||||||||||||||||| Sbjct: 4777 cctctgctggtgctggtgctg 4757
>tpg|BK000627.1| TPA: TPA_exp: Homo sapiens equilibrative nucleoside transporter 4 (ENT4) gene, complete cds Length = 25000 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 25 ccaccgcaccccgccccaataatattctt 53 ||||||||||||||||| ||||| ||||| Sbjct: 11989 ccaccgcaccccgccccgataatgttctt 12017
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 12034210 tctgctggtgctggtgctgca 12034190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 10596811 tctgctggtgctggtgctgca 10596791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 4377851 tctgctggtgctggtgctgca 4377831
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 15051342 tctgctggtgctggtgctgca 15051362
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcag 173 ||||||||||||||||||||| Sbjct: 21991046 ctgctggtgctggtgctgcag 21991066
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 25220576 tctgctggtgctggtgctgca 25220556
>emb|BX830481.1|CNS0A041 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1334 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 agttccaaacaacggcaccaaagag 491 ||||||||||||||||||| ||||| Sbjct: 651 agttccaaacaacggcacctaagag 675
>gb|AC138146.4| Homo sapiens chromosome 17, clone RP11-1143J18, complete sequence Length = 42410 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 cctgtggcggagggaggagcc 294 ||||||||||||||||||||| Sbjct: 774 cctgtggcggagggaggagcc 794
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcag 173 ||||||||||||||||||||| Sbjct: 33110 ctgctggtgctggtgctgcag 33130
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 54271 tctgctggtgctggtgctgca 54251
>dbj|AB018115.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJP23 Length = 31827 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 467 agttccaaacaacggcaccaaagag 491 ||||||||||||||||||| ||||| Sbjct: 24948 agttccaaacaacggcacctaagag 24972
>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473F05 Length = 140575 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 113008 tctgctggtgctggtgctgca 112988
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 8862 tctgctggtgctggtgctgca 8842
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcag 173 ||||||||||||||||||||| Sbjct: 2005934 ctgctggtgctggtgctgcag 2005954 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 ctgctggtgctggtgctgca 172 |||||||||||||||||||| Sbjct: 5596814 ctgctggtgctggtgctgca 5596795
>gb|U94325.1|FRU94325 Fugu rubripes Tuple1/HirA gene, complete cds Length = 9861 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcag 173 ||||||||||||||||||||| Sbjct: 6730 ctgctggtgctggtgctgcag 6750
>gb|U94324.1|FRU94324 Fugu rubripes Tuple1/HirA mRNA, complete cds Length = 3078 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgcag 173 ||||||||||||||||||||| Sbjct: 2024 ctgctggtgctggtgctgcag 2044
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctgc 171 ||||||||||||||||||||| Sbjct: 1080810 ctctgctggtgctggtgctgc 1080830 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 4334486 tgctggtgctggtgctgcag 4334467
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 15059583 tctgctggtgctggtgctgca 15059603
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 11942993 tctgctggtgctggtgctgca 11943013 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 10596693 tctgctggtgctggtgctgca 10596673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 4377832 tctgctggtgctggtgctgca 4377812
>emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC OJ1007_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130672 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 122617 tctgctggtgctggtgctgca 122597
>emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112916 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 60114 tctgctggtgctggtgctgca 60094
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 126645 tctgctggtgctggtgctgca 126665
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgca 172 ||||||||||||||||||||| Sbjct: 73860 tctgctggtgctggtgctgca 73880
>gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, complete sequence Length = 248996 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 cctgtggcggagggaggagcc 294 ||||||||||||||||||||| Sbjct: 179869 cctgtggcggagggaggagcc 179889
>ref|XM_475510.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 576 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 252 caccgcgtccgggccaccgccgcc 275 |||||||||| ||||||||||||| Sbjct: 236 caccgcgtcccggccaccgccgcc 213
>ref|NM_001030340.1| Gallus gallus protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) (PPP3CB), mRNA Length = 2147 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gagagcagcaagagggaggc 212 |||||||||||||||||||| Sbjct: 674 gagagcagcaagagggaggc 655
>ref|XM_478073.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgc 171 |||||||||||||||||||| Sbjct: 1527 tctgctggtgctggtgctgc 1508
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 caccgcgtccgggccaccgccgcc 275 |||||||||| ||||||||||||| Sbjct: 42018 caccgcgtcccggccaccgccgcc 42041
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 ctgctggtgctggtgctgca 172 |||||||||||||||||||| Sbjct: 2181728 ctgctggtgctggtgctgca 2181747
>gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, complete sequence Length = 227953 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 18832 ctctgctggtgctggtgctg 18851
>gb|AC132405.3| Mus musculus BAC clone RP23-332I1 from chromosome 3, complete sequence Length = 207726 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gctggtgctggtgctgcagg 174 |||||||||||||||||||| Sbjct: 193047 gctggtgctggtgctgcagg 193066
>ref|XM_322457.1| Neurospora crassa OR74A hypothetical protein (NCU00372.1) partial mRNA Length = 4932 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ccaccgccgcctgtggcgga 284 |||||||||||||||||||| Sbjct: 4073 ccaccgccgcctgtggcgga 4092
>ref|XM_952165.1| Neurospora crassa OR74A hypothetical protein (NCU00372.1) partial mRNA Length = 4932 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ccaccgccgcctgtggcgga 284 |||||||||||||||||||| Sbjct: 4073 ccaccgccgcctgtggcgga 4092
>ref|XM_955690.1| Neurospora crassa OR74A hypothetical protein (NCU08961.1) partial mRNA Length = 3057 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 276 tgctggtgctggtgctgcag 257
>ref|XM_331352.1| Neurospora crassa OR74A hypothetical protein (NCU08961.1) partial mRNA Length = 3057 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 276 tgctggtgctggtgctgcag 257
>gb|AC104241.7| Homo sapiens chromosome 11, clone RP11-45A12, complete sequence Length = 147821 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctgcagg 174 ||||||||||||||||||| |||| Sbjct: 6961 ctctgctggtgctggtgctccagg 6984
>gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome 1, complete sequence Length = 141921 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccaccccaccgcaccccgcc 39 |||||||||||||||||||| Sbjct: 111661 ccaccccaccgcaccccgcc 111642
>gb|AC121825.3| Mus musculus BAC clone RP23-469H5 from chromosome 3, complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gctggtgctggtgctgcagg 174 |||||||||||||||||||| Sbjct: 169864 gctggtgctggtgctgcagg 169845
>gb|AC152751.22| Medicago truncatula clone mth2-18n7, complete sequence Length = 117170 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 60053 tgctggtgctggtgctgcag 60072
>gb|AC122168.14| Medicago truncatula clone mth2-4o4, complete sequence Length = 120886 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 7119 tgctggtgctggtgctgcag 7100
>ref|XM_795446.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC589082 (LOC589082), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gctggtgctggtgctgcagg 174 |||||||||||||||||||| Sbjct: 1094 gctggtgctggtgctgcagg 1075
>gb|AY324833.1| Gallus gallus calcineurin A beta mRNA, partial cds Length = 799 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gagagcagcaagagggaggc 212 |||||||||||||||||||| Sbjct: 264 gagagcagcaagagggaggc 245
>gb|AC104010.21| Homo sapiens chromosome 11, clone RP11-244C20, complete sequence Length = 63480 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 ctctgctggtgctggtgctgcagg 174 ||||||||||||||||||| |||| Sbjct: 11023 ctctgctggtgctggtgctccagg 11000
>emb|AJ720756.1| Gallus gallus mRNA for hypothetical protein, clone 24n15 Length = 2147 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gagagcagcaagagggaggc 212 |||||||||||||||||||| Sbjct: 674 gagagcagcaagagggaggc 655
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold Length = 489372 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tgctggtgctgcagggggct 179 |||||||||||||||||||| Sbjct: 358725 tgctggtgctgcagggggct 358706
>gb|DQ384242.1| Lithachne humilis clone LhTS2A tasselseed2-like short-chain dehydrogenase/reductase gene, partial cds Length = 759 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ccgcaccaccacacgctcgacggc 129 |||||||||||| ||||||||||| Sbjct: 192 ccgcaccaccacccgctcgacggc 169
>dbj|AK029609.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930413E19 product:unclassifiable, full insert sequence Length = 1302 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgctccaggagaaaccatca 541 |||||||||||||||||||| Sbjct: 14 tgctccaggagaaaccatca 33
>tpg|BK005075.1| TPA: TPA_exp: Oryza sativa (indica cultivar-group) WRKY transcription factor 72 (WRKY72) gene, complete cds Length = 3001 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 ccgccgcctgtggcggagggagga 291 |||||||| ||||||||||||||| Sbjct: 326 ccgccgccggtggcggagggagga 349
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 caccgcgtccgggccaccgccgcc 275 |||||||||| ||||||||||||| Sbjct: 1086407 caccgcgtcccggccaccgccgcc 1086430
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 2620596 ctctgctggtgctggtgctg 2620615
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 40470710 tgctggtgctggtgctgcag 40470691
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 121951 tgctggtgctggtgctgcag 121932
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 32334 tgctggtgctggtgctgcag 32315
>gb|AC010144.4|AC010144 Homo sapiens BAC clone RP11-309M4 from Y, complete sequence Length = 166347 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gagaaaccatcatagctaca 549 |||||||||||||||||||| Sbjct: 121629 gagaaaccatcatagctaca 121648
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 303 gtcgggcgggtcgtcaggcgccgc 326 |||||||||||||||| ||||||| Sbjct: 1293771 gtcgggcgggtcgtcaagcgccgc 1293748
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgc 171 |||||||||||||||||||| Sbjct: 142765 tctgctggtgctggtgctgc 142746
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgc 171 |||||||||||||||||||| Sbjct: 16480 tctgctggtgctggtgctgc 16461
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 99379 ctctgctggtgctggtgctg 99398
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 22818 ctctgctggtgctggtgctg 22837
>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete sequence Length = 185237 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 tccaccccaccgcaccccgcccca 42 ||||||||||| |||||||||||| Sbjct: 124048 tccaccccaccccaccccgcccca 124025
>dbj|AK111684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169K10, full insert sequence Length = 1367 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 tctgctggtgctggtgctgc 171 |||||||||||||||||||| Sbjct: 190 tctgctggtgctggtgctgc 171
>emb|AJ416556.1|CRE416556 Chlamydomonas reinhardtii phot gene for putative blue light receptor, exons 1-13 Length = 10656 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcagcaagagggaggcgac 215 |||||||||||||||||||| Sbjct: 7874 agcagcaagagggaggcgac 7855
>dbj|AK106225.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-A04, full insert sequence Length = 1569 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 230 ctctgctggtgctggtgctg 249
>dbj|AK098855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I05, full insert sequence Length = 2598 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 176 ctctgctggtgctggtgctg 195
>dbj|AK072037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106J07, full insert sequence Length = 1856 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 tgctggtgctggtgctgcag 173 |||||||||||||||||||| Sbjct: 1113 tgctggtgctggtgctgcag 1094
>dbj|AK070502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051F17, full insert sequence Length = 2601 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 176 ctctgctggtgctggtgctg 195
>dbj|AK065257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J16, full insert sequence Length = 2601 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 176 ctctgctggtgctggtgctg 195
>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence Length = 208140 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ctctgctggtgctggtgctg 170 |||||||||||||||||||| Sbjct: 3939 ctctgctggtgctggtgctg 3920
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 tctgctggtgctggtgctgc 171 |||||||||||||||||||| Sbjct: 117724 tctgctggtgctggtgctgc 117743
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence Length = 191903 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgctccaggagaaaccatca 541 |||||||||||||||||||| Sbjct: 41384 tgctccaggagaaaccatca 41403
>emb|CT010476.10| Mouse DNA sequence from clone RP23-339L19 on chromosome 12, complete sequence Length = 235489 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tgctccaggagaaaccatca 541 |||||||||||||||||||| Sbjct: 233028 tgctccaggagaaaccatca 233047
>gb|AC140789.2| Gallus gallus BAC clone TAM31-90N23 from chromosome ul, complete sequence Length = 92928 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gagagcagcaagagggaggc 212 |||||||||||||||||||| Sbjct: 57415 gagagcagcaagagggaggc 57434
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gctggtgctggtgctgcagg 174 |||||||||||||||||||| Sbjct: 273091 gctggtgctggtgctgcagg 273110
>gb|AY493348.1| Astatotilapia burtoni early growth response 1 mRNA, complete cds Length = 3336 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 148 atcctctgctggtgctggtgctgcaggg 175 ||||||||||||||||| ||||||||| Sbjct: 506 atcctctgctggtgctgaagctgcaggg 479 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,469,059 Number of Sequences: 3902068 Number of extensions: 4469059 Number of successful extensions: 97089 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95541 Number of HSP's gapped (non-prelim): 1547 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
