ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart15a11 |
|---|---|
| Clone Library Name | barley_pub |
>ATTY_MOUSE (Q8QZR1) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 454 Score = 96.3 bits (238), Expect = 5e-20 Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 1/164 (0%) Frame = +1 Query: 31 WNFAPDEALLGLSALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAV 210 WN P + + + +R+++ ++K + P+ + VI L GDP+ F T PE +A+ Sbjct: 41 WNVRPSD-MSNKTFNPIRAIVDNMK--VKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAM 97 Query: 211 SAALHSGMHNCYPTGVGLEPARRSIARHLSL-DLPYELSPDDVYLTSGCCQAIEIVCSVL 387 AL SG +N Y +G +R +A + + P E DV LTSGC QAIE+ +VL Sbjct: 98 KDALDSGKYNGYAPSIGYLSSREEVASYYHCPEAPLEAK--DVILTSGCSQAIELCLAVL 155 Query: 388 AGRPGAASSNILLPRPGCLFYEARAAFNGMEARYFHLLPDSDWE 519 A PG NIL+PRPG Y A G+E + ++LLP+ WE Sbjct: 156 A-NPG---QNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWE 195
>ATTY_RAT (P04694) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 454 Score = 94.7 bits (234), Expect = 1e-19 Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 1/148 (0%) Frame = +1 Query: 79 VRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGV 258 +R+++ ++K + P+ + VI L GDP+ F T PE +A+ AL SG +N Y + Sbjct: 56 IRAIVDNMK--VQPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSI 113 Query: 259 GLEPARRSIARHLSL-DLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRP 435 G +R +A + + P E DV LTSGC QAIE+ +VLA PG NIL+PRP Sbjct: 114 GYLSSREEVASYYHCHEAPLEAK--DVILTSGCSQAIELCLAVLA-NPG---QNILIPRP 167 Query: 436 GCLFYEARAAFNGMEARYFHLLPDSDWE 519 G Y A G+E + ++LLP+ WE Sbjct: 168 GFSLYRTLAESMGIEVKLYNLLPEKSWE 195
>ATTY_HUMAN (P17735) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 454 Score = 92.8 bits (229), Expect = 5e-19 Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 1/148 (0%) Frame = +1 Query: 79 VRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGV 258 +R+++ ++K + P+ + +I L GDP+ F T PE +A+ AL SG +N Y + Sbjct: 56 IRAIVDNMK--VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSI 113 Query: 259 GLEPARRSIARHLSL-DLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRP 435 G +R IA + + P E DV LTSGC QAI++ +VLA PG NIL+PRP Sbjct: 114 GFLSSREEIASYYHCPEAPLEAK--DVILTSGCSQAIDLCLAVLA-NPG---QNILVPRP 167 Query: 436 GCLFYEARAAFNGMEARYFHLLPDSDWE 519 G Y+ A G+E + ++LLP+ WE Sbjct: 168 GFSLYKTLAESMGIEVKLYNLLPEKSWE 195
>ATTY_TRYCR (P33447) Tyrosine aminotransferase (EC 2.6.1.5)| (L-tyrosine:2-oxoglutarate aminotransferase) (TAT) Length = 416 Score = 48.9 bits (115), Expect = 8e-06 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 6/159 (3%) Frame = +1 Query: 61 GLSALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHN 240 GL +R+V + K P +P+I L GDP+ T+ ++ + A+ S N Sbjct: 13 GLVFNPIRTVSDNAKPSPSP---KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECN 69 Query: 241 CYPTGVGLEPARRSIARHL------SLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPG 402 Y VG AR ++A +L + D+V L SG I + + + Sbjct: 70 GYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD--- 126 Query: 403 AASSNILLPRPGCLFYEARAAFNGMEARYFHLLPDSDWE 519 A L+P+PG YE G+ +++ P++DWE Sbjct: 127 -AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWE 164
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Frame = +1 Query: 229 GMHNCYPTGVGLEPARRSIARHLSLDLPYELS-PDDVYLTSGCCQAIEIVCSVLAGRPGA 405 G Y + G+E R+S+A ++ E+S P+D++LT+G A+ + S+ P Sbjct: 216 GSVGAYSSSQGVEGIRKSVAEFITKRDEGEISYPEDIFLTAGASAAVNYLLSIFCRGP-- 273 Query: 406 ASSNILLPRPGCLFYEARAAFNGMEARYFHLLPDSDW 516 + +L+P P Y A A N +A ++L +S W Sbjct: 274 -ETGVLIPIPQYPLYTATLALNNSQALPYYLDENSGW 309
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 43.5 bits (101), Expect = 4e-04 Identities = 23/98 (23%), Positives = 44/98 (44%) Frame = +1 Query: 226 SGMHNCYPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGA 405 SG Y G+ RR +A + ++ P D+YLTSG A ++ +++ RP Sbjct: 130 SGSLGAYSASQGIPLVRRHVADFIRARDGFDCEPSDIYLTSGASHAARLIMTLIIARP-- 187 Query: 406 ASSNILLPRPGCLFYEARAAFNGMEARYFHLLPDSDWE 519 + +++P P Y A+ + L +++W+ Sbjct: 188 -TDGVMVPAPQYPLYGAQIDLMSGSMVSYSLSEENNWD 224
>AAT_STRVG (Q60013) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (ASPAT) Length = 397 Score = 41.2 bits (95), Expect = 0.002 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%) Frame = +1 Query: 64 LSALSVRSVLG-SIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHN 240 + A+S + L KA + GRPVI G G+P F T VEA A + ++ Sbjct: 5 IGAISESATLAVDAKAKALKAAGRPVIGFGAGEPD----FPTPDYIVEAAVEACRNPKYH 60 Query: 241 CYPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAI-EIVCSVLAGRPGAASSN 417 Y GL + +IA D YE+ V +T+G QAI E ++L PG Sbjct: 61 RYTPAGGLPELKAAIAAKTLRDSGYEVEASQVLVTNGGKQAIYEAFAAIL--DPG---DE 115 Query: 418 ILLPRP 435 +++P P Sbjct: 116 VIVPAP 121
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 38.1 bits (87), Expect = 0.015 Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 3/130 (2%) Frame = +1 Query: 136 VIPLGHGDPSAFPCFRTAPEAVEAVSAALHS--GMHNCYPTGVGLEPARRSIARHLSL-D 306 ++ +GH + ++ F + +A+E L+ G Y G+ R+++A ++ D Sbjct: 100 ILRVGHNELASLNLF--SRDALERAERLLNDIGGSIGAYSHSQGVPGIRQTVADFITRRD 157 Query: 307 LPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAFNGMEAR 486 +P+D+YLT+G A + S+L + + +L+P P Y A A+ + Sbjct: 158 GGEPATPEDIYLTTGASSAATSLLSLLC---KDSQTGLLIPIPQYPLYTASASLFNAQVL 214 Query: 487 YFHLLPDSDW 516 ++L +S+W Sbjct: 215 PYYLDEESNW 224
>HIS8_DESVH (Q72DA0) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 373 Score = 33.9 bits (76), Expect = 0.28 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = +1 Query: 277 RSIARHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEA 456 R+IA H + ++P+ V +G + I+++ V A PG NI+ RP YE Sbjct: 80 RAIAAH------HGVAPERVVAGNGSDEIIDLLIRVRA-TPG--KHNIVAFRPCFSIYEL 130 Query: 457 RAAFNGMEARYFHLLPD--SDWE 519 +A F G+E R L PD DW+ Sbjct: 131 QAKFCGLEFRQADLRPDFTFDWD 153
>HIS8_HALMA (Q5V4K3) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 33.5 bits (75), Expect = 0.36 Identities = 34/129 (26%), Positives = 64/129 (49%) Frame = +1 Query: 109 GMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGVGLEPARRSIA 288 G+DP D ++ L + F +P+AVEA+ + MH+ YP + + + Sbjct: 26 GLDPDD---MVKLASNENM----FGPSPDAVEAIRGSAER-MHS-YP-----KASHADLV 71 Query: 289 RHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAF 468 L+ D+ ++++P+ V+L++G A++ + + PG ++L+P PG +Y Sbjct: 72 DELA-DM-WDVTPEQVWLSNGGDGALDCLARAMLD-PG---QDVLVPSPGFAYY------ 119 Query: 469 NGMEARYFH 495 M ARY H Sbjct: 120 -AMSARYHH 127
>WSB1_MOUSE (O54927) WD repeat and SOCS box-containing protein 1 (WSB-1)| Length = 421 Score = 33.1 bits (74), Expect = 0.48 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 2/121 (1%) Frame = +1 Query: 34 NFAPDEALLGLSALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEA--VEA 207 +F+PD ALL ++ R + DP +G ++ GH PS P F V A Sbjct: 263 DFSPDGALLATASYDTRVYV------WDPHNGDLLMEFGHLFPSPTPIFAGGANDRWVRA 316 Query: 208 VSAALHSGMHNCYPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVL 387 VS + H G+H L + + D P +++P L++G C A SVL Sbjct: 317 VSFS-HDGLH-----VASLADDKMVRFWRIDEDCPVQVAP----LSNGLCCAFSTDGSVL 366 Query: 388 A 390 A Sbjct: 367 A 367
>HIS8_SYNEL (Q8DM42) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 371 Score = 32.7 bits (73), Expect = 0.62 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 2/149 (1%) Frame = +1 Query: 70 ALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGM--HNC 243 A +R L + +A P+ + L + D + FP P A++ V A + + Sbjct: 2 ATFLRPELSNFRAYSTPTSDSLPLELDYLDTNEFPW--DLPTALKEVLAQQYVSTLASHR 59 Query: 244 YPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNIL 423 YP P R++IAR++S P E+SP + + +G + E++ S+L +IL Sbjct: 60 YPDSHHW-PLRQAIARYVSEQSPTEISPHQIAVGNG---SDELIRSILLATAIGGYGSIL 115 Query: 424 LPRPGCLFYEARAAFNGMEARYFHLLPDS 510 + P Y A G+ PD+ Sbjct: 116 VAEPTFSIYGILAQTLGIPVHRATRDPDT 144
>AAT_STRGR (P36692) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) (Fragment) Length = 213 Score = 32.3 bits (72), Expect = 0.81 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Frame = +1 Query: 64 LSALSVRSVLG-SIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHN 240 + A+S + L KA + GRPVI G G+P F T V+A A + ++ Sbjct: 16 IGAISESATLAVDAKAKALKAAGRPVIGFGAGEPD----FPTPDYIVDAAVEACRNPKYH 71 Query: 241 CYPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAI-EIVCSVLAGRPGAASSN 417 Y T + +IA D YE+ + +T+G QAI E ++L PG Sbjct: 72 RY-TPQRAPELKAAIAEKTLRDSGYEVDAGQILVTNGGKQAIYEAFAAIL--DPG---DE 125 Query: 418 ILLPRP 435 +++P P Sbjct: 126 VIVPAP 131
>AATB2_RHIME (Q06191) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 32.3 bits (72), Expect = 0.81 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Frame = +1 Query: 64 LSALSVRSVLG-SIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHN 240 +S++ V +L +A +G+PVI LG G+P F T +A S A+H G Sbjct: 18 ISSIGVSEILKIGARAAAMKREGKPVIILGAGEPD----FDTPDHVKQAASDAIHRG-ET 72 Query: 241 CYPTGVGLEPARRSIARHLSLD--LPYELSPDDVYLTSGCCQAI 366 Y G +++I + L YEL D++ + +G Q + Sbjct: 73 KYTALDGTPELKKAIREKFQRENGLAYEL--DEITVATGAKQIL 114
>AATB1_RHIME (P58350) Aspartate aminotransferase B (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 410 Score = 32.3 bits (72), Expect = 0.81 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Frame = +1 Query: 64 LSALSVRSVLG-SIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHN 240 +S++ V +L +A +G+PVI LG G+P F T +A S A+H G Sbjct: 18 ISSIGVSEILKIGARAAAMKREGKPVIILGAGEPD----FDTPEHVKQAASDAIHRG-ET 72 Query: 241 CYPTGVGLEPARRSIARHLSLD--LPYELSPDDVYLTSGCCQAI 366 Y G +++I + L YEL D++ + +G Q + Sbjct: 73 KYTALDGTPELKKAIREKFQRENGLAYEL--DEITVATGAKQIL 114
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 32.3 bits (72), Expect = 0.81 Identities = 21/91 (23%), Positives = 39/91 (42%) Frame = +1 Query: 244 YPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNIL 423 Y G++ R +IA ++ + + DD++LT G + ++ +L IL Sbjct: 112 YSHSQGIKGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRN---EKDGIL 168 Query: 424 LPRPGCLFYEARAAFNGMEARYFHLLPDSDW 516 +P P Y A A +G ++L + W Sbjct: 169 VPIPQYPLYSASIALHGGALVPYYLNESTGW 199
>HIS8_NATPD (Q3IRT1) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 355 Score = 32.0 bits (71), Expect = 1.1 Identities = 34/129 (26%), Positives = 53/129 (41%) Frame = +1 Query: 109 GMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGVGLEPARRSIA 288 G+DP D ++ L + F +P+A EA+ H+ N YP + R I Sbjct: 26 GLDPDD---LVKLSSNENP----FGPSPKAAEAIRE--HADRVNSYPKAAATD-LRGEIG 75 Query: 289 RHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAF 468 LS+D V+L +G A++ + + +L+P PG +Y Sbjct: 76 DLLSVDAA------QVWLGNGGDGALDYLARAMLD----PDDGVLVPDPGFAYY------ 119 Query: 469 NGMEARYFH 495 GM ARY H Sbjct: 120 -GMSARYHH 127
>HIS8_LISIN (Q92A83) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 31.6 bits (70), Expect = 1.4 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = +1 Query: 313 YELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAFNGMEARYF 492 Y+L +++ T+G + IE++ VL ++N ++ P + Y A G E R Sbjct: 77 YQLEEEELIFTAGVDELIELLTRVLLD----TTTNTVMATPTFVQYRQNALIEGAEVREI 132 Query: 493 HLLPDSD 513 LL D + Sbjct: 133 PLLQDGE 139
>AAT_THEMA (Q9X0Y2) Aspartate aminotransferase (EC 2.6.1.1) (Transaminase A)| (AspAT) Length = 377 Score = 31.6 bits (70), Expect = 1.4 Identities = 25/80 (31%), Positives = 34/80 (42%) Frame = +1 Query: 127 GRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGVGLEPARRSIARHLSLD 306 G VI L G+P F T VE L G Y G+ R IA+ + Sbjct: 28 GEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGEVK-YTDPRGIYELREGIAKRIGER 82 Query: 307 LPYELSPDDVYLTSGCCQAI 366 ++SPD V +T+G QA+ Sbjct: 83 YKKDISPDQVVVTNGAKQAL 102
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 30.8 bits (68), Expect = 2.4 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +1 Query: 67 SALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCY 246 S ++ + S+ + PS G P HG P+ P T P + A + G NC Sbjct: 265 SPATLPATSSSLPSPATPSHGSPS---SHGPPATHPTSPTPPSTAAGTTTATNGGTSNCL 321 Query: 247 PT 252 T Sbjct: 322 QT 323
>GLMS_PHOPR (Q6LLH3) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 609 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +1 Query: 88 VLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSG 231 V KAG +P DG +I + H P F T P + + AL G Sbjct: 546 VFADEKAGFEPCDGMKIITMPHVSEYTAPIFYTVPMQLLSYHVALIKG 593
>UNG_IDILO (Q5R080) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 216 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +1 Query: 229 GMHNCYPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAA 408 G+ P GV P+ R++ + +++D P + P LTS Q + ++ +VL G A Sbjct: 69 GLSFSVPEGVKFPPSLRNMFKAIAIDYPDTVLPQHGDLTSWAEQGVLLLNTVLTVEQGNA 128 Query: 409 SSN 417 S+ Sbjct: 129 HSH 131
>HIS8_LISMO (Q8Y5X8) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/65 (27%), Positives = 30/65 (46%) Frame = +1 Query: 313 YELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAFNGMEARYF 492 Y+L +++ T+G + IE++ VL + N ++ P + Y A G E R Sbjct: 77 YQLEEEELIFTAGVDELIELLTRVLLD----TTKNTVMATPTFVQYRQNALIEGAEVREI 132 Query: 493 HLLPD 507 LL D Sbjct: 133 PLLTD 137
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/62 (27%), Positives = 25/62 (40%) Frame = +1 Query: 67 SALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCY 246 S ++ + S+ + PS G P HG P+ P T P + A + G NC Sbjct: 265 SPATLPATSSSLPSPATPSHGSPS---SHGPPATHPTSPTPPSTASGATTAANGGSLNCL 321 Query: 247 PT 252 T Sbjct: 322 QT 323
>PURR_SHIFL (P0ACP9) HTH-type transcriptional repressor purR (Purine nucleotide| synthesis repressor) Length = 340 Score = 30.4 bits (67), Expect = 3.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 489 VAGLHAVERGARLVEQAPGPREQDVAAGR 403 +AG + +ERG R + PGP E++ AGR Sbjct: 167 MAGRYLIERGHREIGVIPGPLERNTGAGR 195
>PURR_SALTY (O68446) HTH-type transcriptional repressor purR (Purine nucleotide| synthesis repressor) Length = 340 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 489 VAGLHAVERGARLVEQAPGPREQDVAAGR 403 +AG + VERG R + PGP E++ AGR Sbjct: 167 MAGRYLVERGHRDIGVIPGPLERNTGAGR 195
>PURR_ECOLI (P0ACP7) HTH-type transcriptional repressor purR (Purine nucleotide| synthesis repressor) Length = 340 Score = 30.4 bits (67), Expect = 3.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 489 VAGLHAVERGARLVEQAPGPREQDVAAGR 403 +AG + +ERG R + PGP E++ AGR Sbjct: 167 MAGRYLIERGHREIGVIPGPLERNTGAGR 195
>PURR_ECO57 (P0ACP8) HTH-type transcriptional repressor purR (Purine nucleotide| synthesis repressor) Length = 340 Score = 30.4 bits (67), Expect = 3.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 489 VAGLHAVERGARLVEQAPGPREQDVAAGR 403 +AG + +ERG R + PGP E++ AGR Sbjct: 167 MAGRYLIERGHREIGVIPGPLERNTGAGR 195
>YDCR_ECOLI (P77730) Hypothetical protein ydcR| Length = 468 Score = 30.0 bits (66), Expect = 4.0 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 2/97 (2%) Frame = +1 Query: 88 VLGSIKAGMDPSDGRPVIPLGHG--DPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGVG 261 + ++A DPS V+P DP FP + + A + P G Sbjct: 93 IFDMLQASRDPS----VVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNA 148 Query: 262 LEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEI 372 R++IAR +L +SPD++ +T+G +A+ + Sbjct: 149 --ELRQAIARRYALQ-GITISPDEIVITAGALEALNL 182
>HIS8_LISMF (Q71Y90) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/65 (27%), Positives = 30/65 (46%) Frame = +1 Query: 313 YELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAFNGMEARYF 492 Y+L +++ T+G + IE++ VL + N ++ P + Y A G E R Sbjct: 77 YQLEEEELIFTAGVDELIELLTRVLLD----TTKNTVMATPTFVQYRQNALIEGAEVREI 132 Query: 493 HLLPD 507 LL D Sbjct: 133 PLLVD 137
>YJIR_ECOLI (P39389) Hypothetical protein yjiR| Length = 470 Score = 29.6 bits (65), Expect = 5.3 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 11/132 (8%) Frame = +1 Query: 151 HGDPSAFPCFRTAPEAVEAVSAA------LHSGMHNC-----YPTGVGLEPARRSIARHL 297 H D S P ++ P+ VEA S HN Y G R IAR L Sbjct: 101 HSDSSIVPLSKSTPD-VEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIAR-L 158 Query: 298 SLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAFNGM 477 LD ++ DD+ +TSGC ++ + + +PG +I+ C +Y + GM Sbjct: 159 MLDSGSVVTADDIIITSGCHNSMSLALMAVC-KPG----DIVAVESPC-YYGSMQMLRGM 212 Query: 478 EARYFHLLPDSD 513 + + D + Sbjct: 213 GVKVIEIPTDPE 224
>BLAA_STRCI (P33651) HTH-type transcriptional regulator blaA (Beta-lactamase| regulatory protein blaA) Length = 326 Score = 29.6 bits (65), Expect = 5.3 Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Frame = +1 Query: 49 EALLGLSALSVRSVLGSIK---AGMDPSDGRPV----IPLGHGDPSAFPCFRTAPEA--- 198 E GL A+ L ++ AG D R V + L G+P C R PE Sbjct: 136 EVRAGLLAVPPDQALWAVPLGLAGADEPQTRRVFVESLRLRRGEPGPARCIRVQPEDDVP 195 Query: 199 -VEAVSAALHSGMHNCYPTGVGLEPARRSIARHLSLDLPYELSPDDVYLTSGCCQAIEI 372 ++ A L VGL PA+ S+A L+ LS DD+ L S QA E+ Sbjct: 196 HIQGRLARLRDA--------VGLRPAQLSVAPDLTSATADVLSSDDLLLCSP-AQAAEL 245
>GLI3_HUMAN (P10071) Zinc finger protein GLI3| Length = 1580 Score = 29.3 bits (64), Expect = 6.9 Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 12/104 (11%) Frame = +1 Query: 10 PTPAPEMWNFAPDE--ALLGLSALSVRSVLGSIKAGMDPSDG----------RPVIPLGH 153 PTP P M + ALLG AL L + A SDG +P LGH Sbjct: 942 PTPLPNMERMSLKTRLALLG-DALEPGVALPPVHAPRRCSDGGAHGYGRRHLQPHDALGH 1000 Query: 154 GDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGVGLEPARRSI 285 G A RT E + S + +C P + +RS+ Sbjct: 1001 GVRRASDPVRTGSEGLALPRVPRFSSLSSCNPPAMATSAEKRSL 1044
>MARCS_RAT (P30009) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate 80 kDa protein) Length = 308 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -3 Query: 291 TRDGAPRRLQADAGGVAVVHPGVERGGDGFHG 196 T DGA A AGG A PG + GG G G Sbjct: 180 TADGAKDEAAAAAGGDAAAAPGEQAGGAGAEG 211
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Frame = +1 Query: 256 VGLEPARRSIARHLS---LDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNIL 423 +G E S+ H S LD P EL PD +S C E++ S + ++SS+I+ Sbjct: 389 MGQEDNMTSVTNHFSQSKLDSPEELEPDREEDSSSCIDIQEVLSSSESDSCNSSSSDII 447
>NADE_METMA (Q8PZP6) NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)| Length = 256 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 Query: 16 PAPEMWNFAPDEALLGLSALSVRSVLGSIKAGMDP 120 P+ +W DEA LG+S + V VL I+ G++P Sbjct: 185 PSAGLWAGQTDEADLGISYVKVDEVLKMIEDGVEP 219
>TRPD_LISMO (Q8Y6Q3) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 339 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 9/47 (19%) Frame = +1 Query: 313 YELSPDDVYLTSGCCQAIE---------IVCSVLAGRPGAASSNILL 426 Y L P+DV LTS +AI I+ SVL G PGA +LL Sbjct: 245 YTLRPEDVGLTSYPLEAITGGDAKENAAILRSVLEGEPGAYLDTVLL 291
>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 635 Score = 28.9 bits (63), Expect = 9.0 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Frame = +1 Query: 16 PAPEMWNFAPDEALLGLSALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAP- 192 PAP M PD+ L+G S+ + G+++ G+ G GD + C T P Sbjct: 308 PAPTMHWVGPDDRLVGNSSRARAFPNGTLEIGV----------TGAGDAGGYTCIATNPA 357 Query: 193 -EAVEAVSAALHSGMHNCYPTGVGLEPARRSIA 288 EA V + + H + G P IA Sbjct: 358 GEATARVELRVLALPHGGNSSAEGGRPGPSDIA 390
>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 636 Score = 28.9 bits (63), Expect = 9.0 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Frame = +1 Query: 16 PAPEMWNFAPDEALLGLSALSVRSVLGSIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAP- 192 P P M PD+ L+G S+ + G+++ G+ G GD A+ C T P Sbjct: 308 PVPTMHWVGPDDRLVGNSSRAWAFPNGTLEIGV----------TGAGDAGAYTCIATNPA 357 Query: 193 -EAVEAVSAALHSGMHNCYPTGVGLEPARRSIA 288 EA V + + H + G P IA Sbjct: 358 GEATARVELRVLALPHGGNTSAEGGRPGPSDIA 390
>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 28.9 bits (63), Expect = 9.0 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 189 SGGRGSRLRRAPLRDAQLLPHRRRPG 266 S R R R+P RD+ P+RRRPG Sbjct: 397 SSNRDRRASRSPRRDSYRDPYRRRPG 422
>HIS8_HALVO (P17736) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 361 Score = 28.9 bits (63), Expect = 9.0 Identities = 31/137 (22%), Positives = 57/137 (41%) Frame = +1 Query: 109 GMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAVSAALHSGMHNCYPTGVGLEPARRSIA 288 GMDP D + L + P +P+AV A+ A + + YP + R Sbjct: 26 GMDPED---LTKLSSNENPHGP----SPKAVAAIEDAAPTV--SVYPKTAHTDLTERLAD 76 Query: 289 RHLSLDLPYELSPDDVYLTSGCCQAIEIVCSVLAGRPGAASSNILLPRPGCLFYEARAAF 468 + + L+P+ V+++ G +I+ + + IL P PG +Y A + Sbjct: 77 K-------WGLAPEQVWVSPGADGSIDYLTRAVL----EPDDRILEPAPGFSYYSMSARY 125 Query: 469 NGMEARYFHLLPDSDWE 519 + +A + + D D+E Sbjct: 126 HHGDAVQYEVSKDDDFE 142
>PQQE_SILPO (Q5LTB4) Coenzyme PQQ synthesis protein E (Pyrroloquinoline quinone| biosynthesis protein E) Length = 374 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 145 LGHGDPSAFPCFRTAPEAVEAVSAALHSGMH-NCYPTGVGLEPARRSIARHLSLD 306 L G+P++ P+ VE AA +G++ N +G+GL PAR + LD Sbjct: 69 LSGGEPAS------RPDLVELTRAAHEAGLYTNLITSGIGLTPARLDALEAVGLD 117
>TUD_DROME (P25823) Maternal protein tudor| Length = 2515 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +1 Query: 97 SIKAGMDPSDGRPVIPLGHGDPSAFPCFRTAPEAVEAV-SAALH 225 SIK+ +DPS G V L +G+ P P+ +E + S ALH Sbjct: 2230 SIKSVLDPSQGFEVFLLDYGNTLVVPEVWQLPQEIEPIPSLALH 2273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,861,001 Number of Sequences: 219361 Number of extensions: 1092532 Number of successful extensions: 5191 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4582 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5175 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
