>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog|
          Length = 1878

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 21/72 (29%), Positives = 27/72 (37%)
 Frame = -3

Query: 259 PQGHEQTRVAAQDTEPAVNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGG 80
           P  H +T    QD EPA     G  K ++  G+       +H    L LTN     A   
Sbjct: 657 PVRHNKTLQLMQDKEPA-----GRAKKSSKPGEQINKRLASHAFPELTLTNVSGFFANYS 711

Query: 79  HEESLQICCSPG 44
                Q C +PG
Sbjct: 712 SSSKPQECINPG 723

>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 400 CPRQCRNWRSRSRSPRLWDHLYLGQHLRAENVRIDRS 510
           C R CR W + +  PRLW  +     L  E + +DR+
Sbjct: 137 CARVCRRWYNLAWDPRLWRTI----RLTGETINVDRA 169

>MTRC_METAC (Q8TU01) Tetrahydromethanopterin S-methyltransferase subunit C (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit C)
          Length = 267

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 21/64 (32%), Positives = 37/64 (57%)
 Frame = +2

Query: 464 ILASIFGQKMSESTGQALTQTVTLGIGALFLVMLVQLIGGIFIPALRGGLELLIAGAGTV 643
           I+A++FG  +    G  ++      IGA+  V+  ++IG + IP +   + + IAGAGT+
Sbjct: 84  IVAALFGLSVGGIAGPIVSFIAAAIIGAVIGVLANKVIG-MGIPIMEQAM-VEIAGAGTL 141

Query: 644 LFIG 655
           + IG
Sbjct: 142 VIIG 145

>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1|
          Length = 2042

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 387  PVSEKPVSKPYRANSGRAVLLLPREAMPWATKNSTSCRTIEPI 259
            PV+ KP S+  R  + ++ +  P  A+P A +   S  T +PI
Sbjct: 1520 PVTPKPTSRATRGRARKSSVKTPEPAVPTAAEPQPSASTDQPI 1562


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,345,356
Number of Sequences: 219361
Number of extensions: 1978527
Number of successful extensions: 6387
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6382
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)