ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart14b09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1501 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 218 gggaggaggcgtccggcctggacatccgcttccagcacctccccgccgtcgagcccccga 277 |||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 223 gggaggaggcatcgggcctcgacatccgcttccgccacctccccgccgtcgagcccccga 282 Query: 278 cggactgcctgggcatcgaggagttcgtctcccggttcgtgcagctccacgcggcccacg 337 | | |||| |||| ||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 283 ccggctgcgcgggcgtcgaggagttcgtctcccgcttcgtgcagctccacgcggaccacg 342 Query: 338 tgaaggcagccatctccggcttggcatgccccgtggccgcgctcgtcgtcgacttcttct 397 ||| ||| ||| |||||||| ||| ||||| ||||||| |||||| |||||||||| | Sbjct: 343 tgagggcggccgtctccggcctggactgcccggtggccggcctcgtcatcgacttctttt 402 Query: 398 gcacaacgatgctcgacgtgtcccgggagctagccgtgccggcctacgtctacatcac 455 |||| ||| ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| Sbjct: 403 gcacgacgctgctcgacgtggcccgggagctcgccgtcccggcctacgtgtacttcac 460 Score = 115 bits (58), Expect = 1e-22 Identities = 120/140 (85%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 41 aaatggagaccccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtcca 100 |||||| || ||||||| ||||||||||||| |||| | ||||||||||||||||| Sbjct: 43 aaatggcgatcccgaccctcgtgctgctgccaacctggggcaccggccacctcatgtccc 102 Query: 101 tgttcgacgccggcaagcggctgcttgcccgcagcggcggcgga---ctgtcgctcacgg 157 || |||||||||||||||||||||| | | || ||||||||||| || |||||||||| Sbjct: 103 tgctcgacgccggcaagcggctgctcggctgccgcggcggcggaggcctctcgctcacgg 162 Query: 158 tgctcgtcatgcaggcgccg 177 |||||||||||||| ||||| Sbjct: 163 tgctcgtcatgcagccgccg 182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 218 gggaggaggcgtccggcctggacatccgcttccagcacctccccgccgtcgagcccccga 277 |||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 18992474 gggaggaggcatcgggcctcgacatccgcttccgccacctccccgccgtcgagcccccga 18992533 Query: 278 cggactgcctgggcatcgaggagttcgtctcccggttcgtgcagctccacgcggcccacg 337 | | |||| |||| ||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 18992534 ccggctgcgcgggcgtcgaggagttcgtctcccgcttcgtgcagctccacgcggaccacg 18992593 Query: 338 tgaaggcagccatctccggcttggcatgccccgtggccgcgctcgtcgtcgacttcttct 397 ||| ||| ||| |||||||| ||| ||||| ||||||| |||||| |||||||||| | Sbjct: 18992594 tgagggcggccgtctccggcctggactgcccggtggccggcctcgtcatcgacttctttt 18992653 Query: 398 gcacaacgatgctcgacgtgtcccgggagctagccgtgccggcctacgtctacatcac 455 |||| ||| ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| Sbjct: 18992654 gcacgacgctgctcgacgtggcccgggagctcgccgtcccggcctacgtgtacttcac 18992711 Score = 115 bits (58), Expect = 1e-22 Identities = 120/140 (85%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 41 aaatggagaccccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtcca 100 |||||| || ||||||| ||||||||||||| |||| | ||||||||||||||||| Sbjct: 18992294 aaatggcgatcccgaccctcgtgctgctgccaacctggggcaccggccacctcatgtccc 18992353 Query: 101 tgttcgacgccggcaagcggctgcttgcccgcagcggcggcgga---ctgtcgctcacgg 157 || |||||||||||||||||||||| | | || ||||||||||| || |||||||||| Sbjct: 18992354 tgctcgacgccggcaagcggctgctcggctgccgcggcggcggaggcctctcgctcacgg 18992413 Query: 158 tgctcgtcatgcaggcgccg 177 |||||||||||||| ||||| Sbjct: 18992414 tgctcgtcatgcagccgccg 18992433 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 19410446 ccgacggtggtgttgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 19410387 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgcag 171 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| | Sbjct: 19410386 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgccg 19410327 Query: 172 gcgccg 177 |||||| Sbjct: 19410326 gcgccg 19410321 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 256 ctccccgccgtcgagcccccgacggactgcctgggcatcgaggagttcgtctcccggttc 315 |||||||||||||||| ||| || | |||| || | |||||||||| | ||||||| | Sbjct: 22544357 ctccccgccgtcgagcaccccaccggctgcgaggcgaccgaggagttcatgtcccggtac 22544416 Query: 316 gtgcagctccacgcggcccacgtgaaggcagccatctccggcttggcatgccccgtggcc 375 || ||| ||||||| |||||| ||||| |||||| |||||||||| | |||||||||| Sbjct: 22544417 gtcgagcgccacgcgcaccacgtcaaggcggccatcgccggcttggcgtcccccgtggcc 22544476 Query: 376 gcgctcgtcgtcgacttcttct 397 ||| ||||||| ||| |||||| Sbjct: 22544477 gcggtcgtcgtggacctcttct 22544498 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 19402531 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 19402472 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 19402471 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 19402414 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 19402216 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 19402157 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 19402156 gagctcggcgtgccgggctacgt 19402134 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||||||| || Sbjct: 19410131 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgacgtggccgcc 19410072 Query: 424 gagctagccgtgccggcctacgtctacatcac 455 ||||| | ||||||| ||||||| ||| |||| Sbjct: 19410071 gagctcggcgtgccgtcctacgtgtacttcac 19410040 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 18984573 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 18984616 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcgacgccggcaagcggctgct 125 |||||||||||||||| || |||| ||||||||||||||||| Sbjct: 18955932 ccggccacctcatgtcgctgatcgaggccggcaagcggctgct 18955890 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 19410257 gacatcagcttccggcacctccccgccgtcga 19410226 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 19402342 gacatcagcttccggcacctccccgccgtcga 19402311 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 ctcacggtgctcgtcatgcaggcgccg 177 ||||| ||||||||||||||||||||| Sbjct: 22544252 ctcaccgtgctcgtcatgcaggcgccg 22544278 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 18984421 ccggccacctcatgtccatgctcga 18984445 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 gcgctcgtcgtcgacttcttc 396 ||||||||||||||||||||| Sbjct: 18955618 gcgctcgtcgtcgacttcttc 18955598
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 218 gggaggaggcgtccggcctggacatccgcttccagcacctccccgccgtcgagcccccga 277 |||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 94459 gggaggaggcatcgggcctcgacatccgcttccgccacctccccgccgtcgagcccccga 94518 Query: 278 cggactgcctgggcatcgaggagttcgtctcccggttcgtgcagctccacgcggcccacg 337 | | |||| |||| ||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 94519 ccggctgcgcgggcgtcgaggagttcgtctcccgcttcgtgcagctccacgcggaccacg 94578 Query: 338 tgaaggcagccatctccggcttggcatgccccgtggccgcgctcgtcgtcgacttcttct 397 ||| ||| ||| |||||||| ||| ||||| ||||||| |||||| |||||||||| | Sbjct: 94579 tgagggcggccgtctccggcctggactgcccggtggccggcctcgtcatcgacttctttt 94638 Query: 398 gcacaacgatgctcgacgtgtcccgggagctagccgtgccggcctacgtctacatcac 455 |||| ||| ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| Sbjct: 94639 gcacgacgctgctcgacgtggcccgggagctcgccgtcccggcctacgtgtacttcac 94696 Score = 115 bits (58), Expect = 1e-22 Identities = 120/140 (85%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 41 aaatggagaccccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtcca 100 |||||| || ||||||| ||||||||||||| |||| | ||||||||||||||||| Sbjct: 94279 aaatggcgatcccgaccctcgtgctgctgccaacctggggcaccggccacctcatgtccc 94338 Query: 101 tgttcgacgccggcaagcggctgcttgcccgcagcggcggcgga---ctgtcgctcacgg 157 || |||||||||||||||||||||| | | || ||||||||||| || |||||||||| Sbjct: 94339 tgctcgacgccggcaagcggctgctcggctgccgcggcggcggaggcctctcgctcacgg 94398 Query: 158 tgctcgtcatgcaggcgccg 177 |||||||||||||| ||||| Sbjct: 94399 tgctcgtcatgcagccgccg 94418 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 86558 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 86601 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcgacgccggcaagcggctgct 125 |||||||||||||||| || |||| ||||||||||||||||| Sbjct: 57917 ccggccacctcatgtcgctgatcgaggccggcaagcggctgct 57875 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 86406 ccggccacctcatgtccatgctcga 86430 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 gcgctcgtcgtcgacttcttc 396 ||||||||||||||||||||| Sbjct: 57603 gcgctcgtcgtcgacttcttc 57583
>dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120G17, full insert sequence Length = 2031 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 218 gggaggaggcgtccggcctggacatccgcttccagcacctccccgccgtcgagcccccga 277 |||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 147 gggaggaggcatcgggcctcgacatccgcttccgccacctccccgccgtcgagcccccga 206 Query: 278 cggactgcctgggcatcgaggagttcgtctcccggttcgtgcagctccacgcggcccacg 337 | | |||| |||| ||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 207 ccggctgcgcgggcgtcgaggagttcgtctcccgcttcgtgcagctccacgcggaccacg 266 Query: 338 tgaaggcagccatctccggcttggcatgccccgtggccgcgctcgtcgtcgacttcttct 397 ||| ||| ||| |||||||| ||| ||||| ||||||| |||||| |||||||||| | Sbjct: 267 tgagggcggccgtctccggcctggactgcccggtggccggcctcgtcatcgacttctttt 326 Query: 398 gcacaacgatgctcgacgtgtcccgggagctagccgtgccggcctacgtctacatcac 455 |||| ||| ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| Sbjct: 327 gcacgacgctgctcgacgtggcccgggagctcgccgtcccggcctacgtgtacttcac 384 Score = 103 bits (52), Expect = 5e-19 Identities = 87/98 (88%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcgacgccggcaagcggctgcttgcccgcagcggcggcg 142 ||||||||||||||||| || |||||||||||||||||||||| | | || ||||||||| Sbjct: 9 ccggccacctcatgtccctgctcgacgccggcaagcggctgctcggctgccgcggcggcg 68 Query: 143 ga---ctgtcgctcacggtgctcgtcatgcaggcgccg 177 || || |||||||||||||||||||||||| ||||| Sbjct: 69 gaggcctctcgctcacggtgctcgtcatgcagccgccg 106
>dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A10, full insert sequence Length = 1501 Score = 226 bits (114), Expect = 5e-56 Identities = 207/238 (86%) Strand = Plus / Plus Query: 218 gggaggaggcgtccggcctggacatccgcttccagcacctccccgccgtcgagcccccga 277 |||||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 223 gggaggaggcatcgggcctcgacatccgcttccgccacctccccgccgtcgagcccccga 282 Query: 278 cggactgcctgggcatcgaggagttcgtctcccggttcgtgcagctccacgcggcccacg 337 | | |||| |||| |||||| |||||||||||| ||||||||||||||||||| ||||| Sbjct: 283 ccggctgcgcgggcgtcgaggggttcgtctcccgcttcgtgcagctccacgcggaccacg 342 Query: 338 tgaaggcagccatctccggcttggcatgccccgtggccgcgctcgtcgtcgacttcttct 397 ||| ||| ||| |||||||| ||| ||||| ||||||| |||||| |||||||||| | Sbjct: 343 tgagggcggccgtctccggcctggactgcccggtggccggcctcgtcatcgacttctttt 402 Query: 398 gcacaacgatgctcgacgtgtcccgggagctagccgtgccggcctacgtctacatcac 455 |||| ||| ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| Sbjct: 403 gcacgacgctgctcgacgtggcccgggagctcgccgtcccggcctacgtgtacttcac 460 Score = 115 bits (58), Expect = 1e-22 Identities = 120/140 (85%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 41 aaatggagaccccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtcca 100 |||||| || ||||||| ||||||||||||| |||| | ||||||||||||||||| Sbjct: 43 aaatggcgatcccgaccctcgtgctgctgccaacctggggcaccggccacctcatgtccc 102 Query: 101 tgttcgacgccggcaagcggctgcttgcccgcagcggcggcgga---ctgtcgctcacgg 157 || |||||||||||||||||||||| | | || ||||||||||| || |||||||||| Sbjct: 103 tgctcgacgccggcaagcggctgctcggctgccgcggcggcggaggcctctcgctcacgg 162 Query: 158 tgctcgtcatgcaggcgccg 177 |||||||||||||| ||||| Sbjct: 163 tgctcgtcatgcagccgccg 182
>ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1639 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 1430 ccgacggtggtgttgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 1371 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgcag 171 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| | Sbjct: 1370 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgccg 1311 Query: 172 gcgccg 177 |||||| Sbjct: 1310 gcgccg 1305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||||||| || Sbjct: 1115 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgacgtggccgcc 1056 Query: 424 gagctagccgtgccggcctacgtctacatcac 455 ||||| | ||||||| ||||||| ||| |||| Sbjct: 1055 gagctcggcgtgccgtcctacgtgtacttcac 1024 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 1241 gacatcagcttccggcacctccccgccgtcga 1210
>ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1914 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 238 ccgacggtggtgttgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 297 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgcag 171 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| | Sbjct: 298 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgccg 357 Query: 172 gcgccg 177 |||||| Sbjct: 358 gcgccg 363 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||||||| || Sbjct: 553 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgacgtggccgcc 612 Query: 424 gagctagccgtgccggcctacgtctacatcac 455 ||||| | ||||||| ||||||| ||| |||| Sbjct: 613 gagctcggcgtgccgtcctacgtgtacttcac 644 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 427 gacatcagcttccggcacctccccgccgtcga 458
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Minus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 99984 ccgacggtggtgttgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 99925 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgcag 171 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| | Sbjct: 99924 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgccg 99865 Query: 172 gcgccg 177 |||||| Sbjct: 99864 gcgccg 99859 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 92069 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 92010 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 92009 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 91952 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 91754 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 91695 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 91694 gagctcggcgtgccgggctacgt 91672 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||||||| || Sbjct: 99669 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgacgtggccgcc 99610 Query: 424 gagctagccgtgccggcctacgtctacatcac 455 ||||| | ||||||| ||||||| ||| |||| Sbjct: 99609 gagctcggcgtgccgtcctacgtgtacttcac 99578 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 99795 gacatcagcttccggcacctccccgccgtcga 99764 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 91880 gacatcagcttccggcacctccccgccgtcga 91849
>dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E03, full insert sequence Length = 1914 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 237 ccgacggtggtgttgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 296 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgcag 171 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| | Sbjct: 297 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgccg 356 Query: 172 gcgccg 177 |||||| Sbjct: 357 gcgccg 362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||||||| || Sbjct: 552 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgacgtggccgcc 611 Query: 424 gagctagccgtgccggcctacgtctacatcac 455 ||||| | ||||||| ||||||| ||| |||| Sbjct: 612 gagctcggcgtgccgtcctacgtgtacttcac 643 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 426 gacatcagcttccggcacctccccgccgtcga 457
>ref|NM_186324.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1688 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 256 ctccccgccgtcgagcccccgacggactgcctgggcatcgaggagttcgtctcccggttc 315 |||||||||||||||| ||| || | |||| || | |||||||||| | ||||||| | Sbjct: 281 ctccccgccgtcgagcaccccaccggctgcgaggcgaccgaggagttcatgtcccggtac 340 Query: 316 gtgcagctccacgcggcccacgtgaaggcagccatctccggcttggcatgccccgtggcc 375 || ||| ||||||| |||||| ||||| |||||| |||||||||| | |||||||||| Sbjct: 341 gtcgagcgccacgcgcaccacgtcaaggcggccatcgccggcttggcgtcccccgtggcc 400 Query: 376 gcgctcgtcgtcgacttcttct 397 ||| ||||||| ||| |||||| Sbjct: 401 gcggtcgtcgtggacctcttct 422 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 ctcacggtgctcgtcatgcaggcgccg 177 ||||| ||||||||||||||||||||| Sbjct: 176 ctcaccgtgctcgtcatgcaggcgccg 202
>ref|XM_478346.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 15 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 74 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 75 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 132 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 330 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 389 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 390 gagctcggcgtgccgggctacgt 412 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 204 gacatcagcttccggcacctccccgccgtcga 235
>ref|XM_506362.1| PREDICTED Oryza sativa (japonica cultivar-group), P0409B11.19 mRNA Length = 1645 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 61 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 120 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 121 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 178 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 376 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 435 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 436 gagctcggcgtgccgggctacgt 458 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 250 gacatcagcttccggcacctccccgccgtcga 281
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 256 ctccccgccgtcgagcccccgacggactgcctgggcatcgaggagttcgtctcccggttc 315 |||||||||||||||| ||| || | |||| || | |||||||||| | ||||||| | Sbjct: 87845 ctccccgccgtcgagcaccccaccggctgcgaggcgaccgaggagttcatgtcccggtac 87904 Query: 316 gtgcagctccacgcggcccacgtgaaggcagccatctccggcttggcatgccccgtggcc 375 || ||| ||||||| |||||| ||||| |||||| |||||||||| | |||||||||| Sbjct: 87905 gtcgagcgccacgcgcaccacgtcaaggcggccatcgccggcttggcgtcccccgtggcc 87964 Query: 376 gcgctcgtcgtcgacttcttct 397 ||| ||||||| ||| |||||| Sbjct: 87965 gcggtcgtcgtggacctcttct 87986 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 ctcacggtgctcgtcatgcaggcgccg 177 ||||| ||||||||||||||||||||| Sbjct: 87740 ctcaccgtgctcgtcatgcaggcgccg 87766
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_E08 Length = 119926 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 256 ctccccgccgtcgagcccccgacggactgcctgggcatcgaggagttcgtctcccggttc 315 |||||||||||||||| ||| || | |||| || | |||||||||| | ||||||| | Sbjct: 24739 ctccccgccgtcgagcaccccaccggctgcgaggcgaccgaggagttcatgtcccggtac 24798 Query: 316 gtgcagctccacgcggcccacgtgaaggcagccatctccggcttggcatgccccgtggcc 375 || ||| ||||||| |||||| ||||| |||||| |||||||||| | |||||||||| Sbjct: 24799 gtcgagcgccacgcgcaccacgtcaaggcggccatcgccggcttggcgtcccccgtggcc 24858 Query: 376 gcgctcgtcgtcgacttcttct 397 ||| ||||||| ||| |||||| Sbjct: 24859 gcggtcgtcgtggacctcttct 24880 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 ctcacggtgctcgtcatgcaggcgccg 177 ||||| ||||||||||||||||||||| Sbjct: 24634 ctcaccgtgctcgtcatgcaggcgccg 24660
>dbj|AK119544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H01, full insert sequence Length = 1645 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 61 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 120 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 121 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 178 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 376 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 435 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 436 gagctcggcgtgccgggctacgt 458 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 250 gacatcagcttccggcacctccccgccgtcga 281
>dbj|AK107291.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B11, full insert sequence Length = 1688 Score = 83.8 bits (42), Expect = 5e-13 Identities = 117/142 (82%) Strand = Plus / Plus Query: 256 ctccccgccgtcgagcccccgacggactgcctgggcatcgaggagttcgtctcccggttc 315 |||||||||||||||| ||| || | |||| || | |||||||||| | ||||||| | Sbjct: 281 ctccccgccgtcgagcaccccaccggctgcgaggcgaccgaggagttcatgtcccggtac 340 Query: 316 gtgcagctccacgcggcccacgtgaaggcagccatctccggcttggcatgccccgtggcc 375 || ||| ||||||| |||||| ||||| |||||| |||||||||| | |||||||||| Sbjct: 341 gtcgagcgccacgcgcaccacgtcaaggcggccatcgccggcttggcgtcccccgtggcc 400 Query: 376 gcgctcgtcgtcgacttcttct 397 ||| ||||||| ||| |||||| Sbjct: 401 gcggtcgtcgtggacctcttct 422 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 ctcacggtgctcgtcatgcaggcgccg 177 ||||| ||||||||||||||||||||| Sbjct: 176 ctcaccgtgctcgtcatgcaggcgccg 202
>dbj|AK105912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G12, full insert sequence Length = 1645 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 61 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 120 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 121 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 178 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 376 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 435 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 436 gagctcggcgtgccgggctacgt 458 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 250 gacatcagcttccggcacctccccgccgtcga 281
>dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A09, full insert sequence Length = 1638 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 1429 ccgacggtggtgttgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 1370 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 1369 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 1312 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||||||| || Sbjct: 1114 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgacgtggccgcc 1055 Query: 424 gagctagccgtgccggcctacgtctacatcac 455 ||||| | ||||||| ||||||| ||| |||| Sbjct: 1054 gagctcggcgtgccgtcctacgtgtacttcac 1023 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 1240 gacatcagcttccggcacctccccgccgtcga 1209
>dbj|AK065987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044P16, full insert sequence Length = 1599 Score = 83.8 bits (42), Expect = 5e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 52 ccgaccgtcgtgctgctgcccgtctggtccgccggccacctcatgtccatgttcgacgcc 111 ||||| || ||| |||||||||| ||| |||||||||| ||||| ||||| |||| ||| Sbjct: 15 ccgacggtggtggtgctgcccgtgtggggcgccggccacttcatgcccatgatcgaggcc 74 Query: 112 ggcaagcggctgcttgcccgcagcggcggcggactgtcgctcacggtgctcgtcatgc 169 |||||||||||||| | |||||||||||| |||||| |||| |||||| |||||| Sbjct: 75 ggcaagcggctgctccgcggcagcggcggcgcgctgtcggtcaccgtgctcctcatgc 132 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 364 tgccccgtggccgcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgg 423 ||||||||||||||||||||| |||| |||||||||| || |||||| ||||||||| Sbjct: 330 tgccccgtggccgcgctcgtcaccgacatcttctgcacgccggcgctcgaggtgtcccgg 389 Query: 424 gagctagccgtgccggcctacgt 446 ||||| | |||||||| |||||| Sbjct: 390 gagctcggcgtgccgggctacgt 412 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Plus Query: 238 gacatccgcttccagcacctccccgccgtcga 269 |||||| |||||| |||||||||||||||||| Sbjct: 204 gacatcagcttccggcacctccccgccgtcga 235
>dbj|AB070758.1| Vigna angularis Adgt-15 mRNA for glucosyltransferase like protein, partial cds Length = 842 Score = 81.8 bits (41), Expect = 2e-12 Identities = 116/140 (82%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 316 gtgcagctccacgcggcccacgtgaaggcagccatctccggcttggcatgccccgtggcc 375 |||||||||||||| |||| | | ||| |||||||| |||||| | || || |||||| Sbjct: 16 gtgcagctccacgctccccatctcagggctgccatctcgggcttgacgtgtccggtggcc 75 Query: 376 gcgctcgtcgtcgacttcttctgcacaacgatgctcgacgtgtcccgggagctagccgtg 435 | ||||||||||||| |||||||||| || ||| ||||||||||| ||||| ||||| Sbjct: 76 gggctcgtcgtcgacatcttctgcacgccggcgcttgacgtgtcccgcgagct--ccgtg 133 Query: 436 ccggcctacgtctacatcac 455 ||||||||||| ||| |||| Sbjct: 134 ccggcctacgtgtacttcac 153
>ref|XM_478278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1641 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 1318 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 1275 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 1470 ccggccacctcatgtccatgctcga 1446
>ref|XM_507364.1| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.25 mRNA Length = 1747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 1419 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 1376 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 1571 ccggccacctcatgtccatgctcga 1547
>ref|XM_506357.2| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.25 mRNA Length = 1790 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 1375 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 1332 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 1527 ccggccacctcatgtccatgctcga 1503
>ref|XM_478277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 232 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 275 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 80 ccggccacctcatgtccatgctcga 104
>ref|XM_506356.1| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.24 mRNA Length = 1709 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 262 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 305 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 110 ccggccacctcatgtccatgctcga 134
>dbj|AK106005.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A05, full insert sequence Length = 1686 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 232 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 275 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 80 ccggccacctcatgtccatgctcga 104
>dbj|AK099344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028A15, full insert sequence Length = 1640 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 1317 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 1274 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 1469 ccggccacctcatgtccatgctcga 1445
>dbj|AK064324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F04, full insert sequence Length = 1747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||||||||| Sbjct: 1419 gcgtcgggcctcgacatccgcttccaccgcctccccgccgtcga 1376 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 1571 ccggccacctcatgtccatgctcga 1547
>ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcgacgccggcaagcggctgct 125 |||||||||||||||| || |||| ||||||||||||||||| Sbjct: 47 ccggccacctcatgtcgctgatcgaggccggcaagcggctgct 89 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 gcgctcgtcgtcgacttcttc 396 ||||||||||||||||||||| Sbjct: 361 gcgctcgtcgtcgacttcttc 381
>gb|AY106599.1| Zea mays PCO103512 mRNA sequence Length = 613 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 288 gggcatcgaggagttcgtctcccggttcgtgcagctccacgcggcccacgtgaaggcagc 347 |||||||||||||| | | ||||| | ||||||||| || || ||||||| ||||| || Sbjct: 405 gggcatcgaggagtacatatcccgctacgtgcagctgtactcgccccacgtcaaggcggc 464 Query: 348 catctccggcttggcatgccccgtggccgcgctcgtcgtcgacttcttctgcac 401 | || |||| ||| | ||||| ||||||| |||| |||||| |||||||||| Sbjct: 465 cgtcgccgggttgacgtgcccggtggccggcgtcgttgtcgacatcttctgcac 518
>dbj|AK105785.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G10, full insert sequence Length = 1709 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||||||| | ||||||||| ||||| Sbjct: 262 gcgtcgggcctcgacatccgcttccaccgcctccccgctgtcga 305 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 110 ccggccacctcatgtccatgctcga 134
>dbj|AK101518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I03, full insert sequence Length = 1790 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Minus Query: 226 gcgtccggcctggacatccgcttccagcacctccccgccgtcga 269 ||||| ||||| |||||||||| ||| | ||||||||||||||| Sbjct: 1374 gcgtcgggcctcgacatccgctcccaccgcctccccgccgtcga 1331 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ccggccacctcatgtccatgttcga 107 |||||||||||||||||||| |||| Sbjct: 1526 ccggccacctcatgtccatgctcga 1502
>dbj|AB187566.1| Murine leukemia virus Graffi GV-1.4 DNA, complete genome Length = 8259 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 323 tccacgcggcccacgtgaaggcagcca 349 ||||||| ||||||||||||||||||| Sbjct: 5704 tccacgccgcccacgtgaaggcagcca 5730
>dbj|AB187565.1| Murine leukemia virus Graffi GV-1.2 DNA, complete genome Length = 8319 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 323 tccacgcggcccacgtgaaggcagcca 349 ||||||| ||||||||||||||||||| Sbjct: 5705 tccacgccgcccacgtgaaggcagcca 5731
>gb|AF019230.1|AF019230 Murine leukemia virus strain SRS 19-6 complete genome Length = 8256 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 323 tccacgcggcccacgtgaaggcagcca 349 ||||||| ||||||||||||||||||| Sbjct: 5707 tccacgccgcccacgtgaaggcagcca 5733
>ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 ccgtggccgcgctcgtcgtcg 388 ||||||||||||||||||||| Sbjct: 794 ccgtggccgcgctcgtcgtcg 814
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 ggcgccggcggcgaacgacagggccgagg 199 ||||||||||||||| ||||| ||||||| Sbjct: 12610 ggcgccggcggcgaaggacagcgccgagg 12582
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcga 389 ||||||||||||||||||||| Sbjct: 47121 cgtggccgcgctcgtcgtcga 47101
>gb|AF068267.1|AF068267 Streptomyces coelicolor A3(2) DpsA (dpsA), putative membrane protein (rsbB), putative anti-sigma factor kinase (rsbA), and SigB (sigB) genes, complete cds; and unknown genes Length = 4611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcga 389 ||||||||||||||||||||| Sbjct: 44 cgtggccgcgctcgtcgtcga 24
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 ggcgccggcggcgaacgacagggccgagg 199 ||||||||||||||| ||||| ||||||| Sbjct: 3007240 ggcgccggcggcgaaggacagcgccgagg 3007212
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ccgtggccgcgctcgtcgtcg 388 ||||||||||||||||||||| Sbjct: 20561339 ccgtggccgcgctcgtcgtcg 20561319 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 24468208 gctcgtcatgccggcgccggcggc 24468185
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ccgtggccgcgctcgtcgtcg 388 ||||||||||||||||||||| Sbjct: 65300 ccgtggccgcgctcgtcgtcg 65280
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ccgtggccgcgctcgtcgtcg 388 ||||||||||||||||||||| Sbjct: 35711 ccgtggccgcgctcgtcgtcg 35691
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 ggcgccggcggcgaacgacagggccgagg 199 ||||||||||||||| ||||| ||||||| Sbjct: 3016271 ggcgccggcggcgaaggacagcgccgagg 3016243
>ref|XM_483143.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2616 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 224 gctcgtcatgccggcgccggcggc 201
>ref|XM_483144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2500 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 231 gctcgtcatgccggcgccggcggc 208
>ref|NM_192314.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 agcacctccccgccgtcgag 270 |||||||||||||||||||| Sbjct: 398 agcacctccccgccgtcgag 379
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcg 388 |||||||||||||||||||| Sbjct: 12369253 cgtggccgcgctcgtcgtcg 12369234
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcg 388 |||||||||||||||||||| Sbjct: 948297 cgtggccgcgctcgtcgtcg 948278
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tccagcacctccccgccgtcgagc 271 |||||||||||| ||||||||||| Sbjct: 2023856 tccagcacctcctcgccgtcgagc 2023833
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tccggcctggacatccgcttccag 252 ||||||||||||||| |||||||| Sbjct: 175535 tccggcctggacatcggcttccag 175512
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 catgcaggcgccggcggcga 184 |||||||||||||||||||| Sbjct: 259017 catgcaggcgccggcggcga 259036
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcg 388 |||||||||||||||||||| Sbjct: 28271 cgtggccgcgctcgtcgtcg 28252
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cgacgccggcaagcggctgc 124 |||||||||||||||||||| Sbjct: 4792783 cgacgccggcaagcggctgc 4792802
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gctgcttgcccgcagcggcg 139 |||||||||||||||||||| Sbjct: 2181998 gctgcttgcccgcagcggcg 2181979
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcg 388 |||||||||||||||||||| Sbjct: 12366016 cgtggccgcgctcgtcgtcg 12365997
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 agcacctccccgccgtcgag 270 |||||||||||||||||||| Sbjct: 25988836 agcacctccccgccgtcgag 25988817
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0707D10 Length = 172003 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 agcacctccccgccgtcgag 270 |||||||||||||||||||| Sbjct: 84903 agcacctccccgccgtcgag 84884
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cgatgctcgacgtgtcccgg 423 |||||||||||||||||||| Sbjct: 6382071 cgatgctcgacgtgtcccgg 6382090
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 83924 gctcgtcatgccggcgccggcggc 83901
>dbj|AK105488.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B10, full insert sequence Length = 1535 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 agcacctccccgccgtcgag 270 |||||||||||||||||||| Sbjct: 460 agcacctccccgccgtcgag 441
>dbj|AK105244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F08, full insert sequence Length = 1483 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cgtggccgcgctcgtcgtcg 388 |||||||||||||||||||| Sbjct: 716 cgtggccgcgctcgtcgtcg 697
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 caggcgccggcggcgaacgacagg 192 |||||||||||||||||| ||||| Sbjct: 3181185 caggcgccggcggcgaaccacagg 3181208 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgtccggcctggacatccgc 246 |||||||||||||||||||| Sbjct: 2315191 cgtccggcctggacatccgc 2315172
>dbj|AK067229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096C15, full insert sequence Length = 2616 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 224 gctcgtcatgccggcgccggcggc 201
>dbj|AK067381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102C10, full insert sequence Length = 2499 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 230 gctcgtcatgccggcgccggcggc 207
>gb|AF251068.2| Oryza sativa (japonica cultivar-group) alkaline alpha-galactosidase mRNA, complete cds Length = 2694 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 gctcgtcatgcaggcgccggcggc 182 ||||||||||| |||||||||||| Sbjct: 305 gctcgtcatgccggcgccggcggc 282
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cgacgccggcaagcggctgc 124 |||||||||||||||||||| Sbjct: 128836 cgacgccggcaagcggctgc 128817
>dbj|AB070936.1| Streptomyces avermitilis siderophore biosynthetic gene cluster Length = 10056 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cgatgctcgacgtgtcccgg 423 |||||||||||||||||||| Sbjct: 482 cgatgctcgacgtgtcccgg 501 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,972,601 Number of Sequences: 3902068 Number of extensions: 2972601 Number of successful extensions: 63375 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61947 Number of HSP's gapped (non-prelim): 1412 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
