ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart14a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SRCA_HUMAN (Q86TD4) Sarcalumenin precursor 34 0.29
2CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.... 33 0.64
3INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase... 32 1.9
4BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein... 30 4.2
5FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci... 30 4.2
6TF2L1_MOUSE (Q3UNW5) Transcription factor CP2-like protein 1 (CP... 30 7.1
7MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1 30 7.1
8S230_PLAFO (P68875) Transmission-blocking target antigen S230 pr... 30 7.1
9S230_PLAF7 (P68874) Transmission-blocking target antigen S230 pr... 30 7.1
10YKJ7_YEAST (P34245) Hypothetical 15.4 kDa protein in APE1/LAP4-C... 29 9.3
11EF1A_ASPOR (Q9Y713) Elongation factor 1-alpha (EF-1-alpha) 29 9.3
12LRFN5_HUMAN (Q96NI6) Leucine-rich repeat and fibronectin type-II... 29 9.3

>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor|
          Length = 932

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 1/174 (0%)
 Frame = -2

Query: 593 EDAANQLHQHHQEQSANTQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEGCDS*TANSDT 414
           E  A ++ +   +++++ +  G G G     G    E++ +D GD          A+S+ 
Sbjct: 293 ESQAPEMTEEDADEASSEEESGDGSGSEEEGGVPSEEESEEDSGDG---------ASSEE 343

Query: 413 AEGNTNKPSQ-RKAGEQTIQGQ*R*GSAIAPARGDALGNKEQH*L*ND*ADPQGHEQTRV 237
           AEG + + ++ ++AGE           A  P  G  L   E+     +  DPQ  E+ + 
Sbjct: 344 AEGASEEATEPQEAGEPQ--------EAREPQEGGDLQEAEES---QEGGDPQEAEEPQE 392

Query: 236 AAQDTEPAVNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGGHEE 75
                E     +GG+ +      +      GA    + G T+   + A+ G EE
Sbjct: 393 GGAPQEGGEPQEGGDPQEAREPQEAREPQEGAELPEATGTTSHRDRGAQPGPEE 446



 Score = 30.4 bits (67), Expect = 4.2
 Identities = 27/117 (23%), Positives = 44/117 (37%)
 Frame = -2

Query: 542 TQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEGCDS*TANSDTAEGNTNKPSQRKAGEQT 363
           T+G   G+      GH LPE+  + +GD   +G     A + TAE      S    G+  
Sbjct: 165 TEGTASGEAGGQAGGHELPEEVQEVQGDSLVQG-----AVAGTAEPKAEGASPHSEGD-- 217

Query: 362 IQGQ*R*GSAIAPARGDALGNKEQH*L*ND*ADPQGHEQTRVAAQDTEPAVNTDGGE 192
                     + P   +A G+        + A P+G         ++EP ++T   E
Sbjct: 218 ---------GVGPLNAEAEGSPGPG---EEPAVPEGAPDVAAVGGESEPDIDTQASE 262



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>CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-) (Proteinase|
           1)
          Length = 460

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
 Frame = -2

Query: 590 DAANQLHQ------HHQEQSANTQ--------GDGVGQGLTGRFGHFLPEDAGQDKGDPT 453
           DA+NQ  Q      +++   ++TQ        G G G G +G  G    + AG D     
Sbjct: 249 DASNQSFQLYVSGIYNEPACSSTQLDHGVLAVGFGTGSGSSGSHGGSQSQSAGSDSQSAG 308

Query: 452 AEGCDS*TANSDTAEGNTNKPSQRKAGEQTIQGQ*R*GSAIAPARGDALGN 300
           +E   S + +   +E  +   SQ ++G Q+  G    GS      G   GN
Sbjct: 309 SESSQSESGSQSQSESGSQ--SQSQSGSQSFSGSLYSGSYSGSQSGSQSGN 357



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>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)|
           (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase)
           (Phosphatidylinositol polyphosphate 5-phosphatase type
           IV)
          Length = 644

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +1

Query: 313 SPRAGAIALPYRYWPCMVCSPAFR*LGLLVLPSAVSELAV*ESQPSAVGSPLSWPASSGR 492
           SP  G++       P   CSP      L  +P +   L+     PS+ G+PLS  ASS  
Sbjct: 110 SPSRGSVQSEGPGAPAHSCSPPCLSTSLQEIPKSRGVLSSERGSPSSGGNPLSGVASSSP 169

Query: 493 KCPNR 507
             P+R
Sbjct: 170 NLPHR 174



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>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog|
          Length = 1878

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 21/72 (29%), Positives = 27/72 (37%)
 Frame = -2

Query: 263 PQGHEQTRVAAQDTEPAVNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGG 84
           P  H +T    QD EPA     G  K ++  G+       +H    L LTN     A   
Sbjct: 657 PVRHNKTLQLMQDKEPA-----GRAKKSSKPGEQINKRLASHAFPELTLTNVSGFFANYS 711

Query: 83  HEESLQICCSPG 48
                Q C +PG
Sbjct: 712 SSSKPQECINPG 723



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>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 404 CPRQCRNWRSRSRSPRLWDHLYLGQHLRAENVRIDRS 514
           C R CR W + +  PRLW  +     L  E + +DR+
Sbjct: 137 CARVCRRWYNLAWDPRLWRTI----RLTGETINVDRA 169



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>TF2L1_MOUSE (Q3UNW5) Transcription factor CP2-like protein 1 (CP2-related|
           transcriptional repressor-1) (CRTR-1)
          Length = 478

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 445 PSAVGSPLSWPASSGRKCPNRPVKP*PTPSPWVLALCS 558
           PS  GSP S+    G   PN PV+P P  S  +L   S
Sbjct: 273 PSYNGSPNSFGLREGNSSPNHPVEPLPLGSDHLLPSAS 310



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>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1|
          Length = 2042

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 391  PVSEKPVSKPYRANSGRAVLLLPREAMPWATKNSTSCRTIEPI 263
            PV+ KP S+  R  + ++ +  P  A+P A +   S  T +PI
Sbjct: 1520 PVTPKPTSRATRGRARKSSVKTPEPAVPTAAEPQPSASTDQPI 1562



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>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -2

Query: 596 NEDAANQLHQHHQEQSANTQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEG 444
           NED   ++ +   E+     G+ VG+ +    G  + E+ G+++G+   EG
Sbjct: 374 NEDVDEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEEGEEVGEG 424



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>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -2

Query: 596 NEDAANQLHQHHQEQSANTQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEG 444
           NED   ++ +   E+     G+ VG+ +    G  + E+ G+++G+   EG
Sbjct: 374 NEDVDEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEEGEEVGEG 424



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>YKJ7_YEAST (P34245) Hypothetical 15.4 kDa protein in APE1/LAP4-CWP1 intergenic|
           region
          Length = 136

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +1

Query: 163 PCPLWVVVLCSPPSVFTAGSVSWAATLVCSCPCGSAQSFYS*CCSLLPKASPRAGAIALP 342
           P P  V+ + +P   ++     W     C   C S    +S CC  LPK  P     A  
Sbjct: 18  PVPAVVLGVMAPKRAYSTPFGPWPGPAECLWNCPSELRQFSSCCLPLPKLRPPRPTFASL 77

Query: 343 YR 348
           +R
Sbjct: 78  WR 79



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>EF1A_ASPOR (Q9Y713) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 460

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
 Frame = -2

Query: 575 LHQHHQEQSANTQGDGVGQGLTG------RFGHFLPEDAGQDKGDPTAEGCDS 435
           +  HHQ+  A   GD VG  +        R G+     AG  K DP A GCDS
Sbjct: 291 VEMHHQQLQAGNPGDNVGFNVKNVSVKEVRRGNV----AGDSKNDPPA-GCDS 338



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>LRFN5_HUMAN (Q96NI6) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 5 precursor
          Length = 719

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 14/84 (16%)
 Frame = -2

Query: 212 VNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGGHEESLQICCSPGDPLVL 33
           V  + G+HK T      +  +    +  S+ L   VSK A G HEE+ Q C +  D ++ 
Sbjct: 554 VCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSVSKQAVG-HEENAQCCKATSDNVIQ 612

Query: 32  ERP--------------PPRWSSS 3
                            PP W+SS
Sbjct: 613 SSETCSSQDSSTTTSALPPSWTSS 636


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,376,336
Number of Sequences: 219361
Number of extensions: 1877184
Number of successful extensions: 5736
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5727
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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