Clone Name | bart14a02 |
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Clone Library Name | barley_pub |
>SRCA_HUMAN (Q86TD4) Sarcalumenin precursor| Length = 932 Score = 34.3 bits (77), Expect = 0.29 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 1/174 (0%) Frame = -2 Query: 593 EDAANQLHQHHQEQSANTQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEGCDS*TANSDT 414 E A ++ + +++++ + G G G G E++ +D GD A+S+ Sbjct: 293 ESQAPEMTEEDADEASSEEESGDGSGSEEEGGVPSEEESEEDSGDG---------ASSEE 343 Query: 413 AEGNTNKPSQ-RKAGEQTIQGQ*R*GSAIAPARGDALGNKEQH*L*ND*ADPQGHEQTRV 237 AEG + + ++ ++AGE A P G L E+ + DPQ E+ + Sbjct: 344 AEGASEEATEPQEAGEPQ--------EAREPQEGGDLQEAEES---QEGGDPQEAEEPQE 392 Query: 236 AAQDTEPAVNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGGHEE 75 E +GG+ + + GA + G T+ + A+ G EE Sbjct: 393 GGAPQEGGEPQEGGDPQEAREPQEAREPQEGAELPEATGTTSHRDRGAQPGPEE 446 Score = 30.4 bits (67), Expect = 4.2 Identities = 27/117 (23%), Positives = 44/117 (37%) Frame = -2 Query: 542 TQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEGCDS*TANSDTAEGNTNKPSQRKAGEQT 363 T+G G+ GH LPE+ + +GD +G A + TAE S G+ Sbjct: 165 TEGTASGEAGGQAGGHELPEEVQEVQGDSLVQG-----AVAGTAEPKAEGASPHSEGD-- 217 Query: 362 IQGQ*R*GSAIAPARGDALGNKEQH*L*ND*ADPQGHEQTRVAAQDTEPAVNTDGGE 192 + P +A G+ + A P+G ++EP ++T E Sbjct: 218 ---------GVGPLNAEAEGSPGPG---EEPAVPEGAPDVAAVGGESEPDIDTQASE 262
>CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-) (Proteinase| 1) Length = 460 Score = 33.1 bits (74), Expect = 0.64 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 14/111 (12%) Frame = -2 Query: 590 DAANQLHQ------HHQEQSANTQ--------GDGVGQGLTGRFGHFLPEDAGQDKGDPT 453 DA+NQ Q +++ ++TQ G G G G +G G + AG D Sbjct: 249 DASNQSFQLYVSGIYNEPACSSTQLDHGVLAVGFGTGSGSSGSHGGSQSQSAGSDSQSAG 308 Query: 452 AEGCDS*TANSDTAEGNTNKPSQRKAGEQTIQGQ*R*GSAIAPARGDALGN 300 +E S + + +E + SQ ++G Q+ G GS G GN Sbjct: 309 SESSQSESGSQSQSESGSQ--SQSQSGSQSFSGSLYSGSYSGSQSGSQSGN 357
>INP5E_HUMAN (Q9NRR6) 72 kDa inositol polyphosphate 5-phosphatase (EC 3.1.3.36)| (Phosphatidylinositol-4,5-bisphosphate 5-phosphatase) (Phosphatidylinositol polyphosphate 5-phosphatase type IV) Length = 644 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/65 (32%), Positives = 29/65 (44%) Frame = +1 Query: 313 SPRAGAIALPYRYWPCMVCSPAFR*LGLLVLPSAVSELAV*ESQPSAVGSPLSWPASSGR 492 SP G++ P CSP L +P + L+ PS+ G+PLS ASS Sbjct: 110 SPSRGSVQSEGPGAPAHSCSPPCLSTSLQEIPKSRGVLSSERGSPSSGGNPLSGVASSSP 169 Query: 493 KCPNR 507 P+R Sbjct: 170 NLPHR 174
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/72 (29%), Positives = 27/72 (37%) Frame = -2 Query: 263 PQGHEQTRVAAQDTEPAVNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGG 84 P H +T QD EPA G K ++ G+ +H L LTN A Sbjct: 657 PVRHNKTLQLMQDKEPA-----GRAKKSSKPGEQINKRLASHAFPELTLTNVSGFFANYS 711 Query: 83 HEESLQICCSPG 48 Q C +PG Sbjct: 712 SSSKPQECINPG 723
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +2 Query: 404 CPRQCRNWRSRSRSPRLWDHLYLGQHLRAENVRIDRS 514 C R CR W + + PRLW + L E + +DR+ Sbjct: 137 CARVCRRWYNLAWDPRLWRTI----RLTGETINVDRA 169
>TF2L1_MOUSE (Q3UNW5) Transcription factor CP2-like protein 1 (CP2-related| transcriptional repressor-1) (CRTR-1) Length = 478 Score = 29.6 bits (65), Expect = 7.1 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +1 Query: 445 PSAVGSPLSWPASSGRKCPNRPVKP*PTPSPWVLALCS 558 PS GSP S+ G PN PV+P P S +L S Sbjct: 273 PSYNGSPNSFGLREGNSSPNHPVEPLPLGSDHLLPSAS 310
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 29.6 bits (65), Expect = 7.1 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -3 Query: 391 PVSEKPVSKPYRANSGRAVLLLPREAMPWATKNSTSCRTIEPI 263 PV+ KP S+ R + ++ + P A+P A + S T +PI Sbjct: 1520 PVTPKPTSRATRGRARKSSVKTPEPAVPTAAEPQPSASTDQPI 1562
>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 29.6 bits (65), Expect = 7.1 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -2 Query: 596 NEDAANQLHQHHQEQSANTQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEG 444 NED ++ + E+ G+ VG+ + G + E+ G+++G+ EG Sbjct: 374 NEDVDEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEEGEEVGEG 424
>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 29.6 bits (65), Expect = 7.1 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -2 Query: 596 NEDAANQLHQHHQEQSANTQGDGVGQGLTGRFGHFLPEDAGQDKGDPTAEG 444 NED ++ + E+ G+ VG+ + G + E+ G+++G+ EG Sbjct: 374 NEDVDEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEVGEEEGEEVGEG 424
>YKJ7_YEAST (P34245) Hypothetical 15.4 kDa protein in APE1/LAP4-CWP1 intergenic| region Length = 136 Score = 29.3 bits (64), Expect = 9.3 Identities = 17/62 (27%), Positives = 24/62 (38%) Frame = +1 Query: 163 PCPLWVVVLCSPPSVFTAGSVSWAATLVCSCPCGSAQSFYS*CCSLLPKASPRAGAIALP 342 P P V+ + +P ++ W C C S +S CC LPK P A Sbjct: 18 PVPAVVLGVMAPKRAYSTPFGPWPGPAECLWNCPSELRQFSSCCLPLPKLRPPRPTFASL 77 Query: 343 YR 348 +R Sbjct: 78 WR 79
>EF1A_ASPOR (Q9Y713) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 29.3 bits (64), Expect = 9.3 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 6/53 (11%) Frame = -2 Query: 575 LHQHHQEQSANTQGDGVGQGLTG------RFGHFLPEDAGQDKGDPTAEGCDS 435 + HHQ+ A GD VG + R G+ AG K DP A GCDS Sbjct: 291 VEMHHQQLQAGNPGDNVGFNVKNVSVKEVRRGNV----AGDSKNDPPA-GCDS 338
>LRFN5_HUMAN (Q96NI6) Leucine-rich repeat and fibronectin type-III| domain-containing protein 5 precursor Length = 719 Score = 29.3 bits (64), Expect = 9.3 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 14/84 (16%) Frame = -2 Query: 212 VNTDGGEHKTTTHKGQGTANHTGAHECASLGLTNCVSKVARGGHEESLQICCSPGDPLVL 33 V + G+HK T + + + S+ L VSK A G HEE+ Q C + D ++ Sbjct: 554 VCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSVSKQAVG-HEENAQCCKATSDNVIQ 612 Query: 32 ERP--------------PPRWSSS 3 PP W+SS Sbjct: 613 SSETCSSQDSSTTTSALPPSWTSS 636 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,376,336 Number of Sequences: 219361 Number of extensions: 1877184 Number of successful extensions: 5736 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5378 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5727 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)