Clone Name | bart13h08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O16, full insert sequence Length = 1713 Score = 115 bits (58), Expect = 1e-22 Identities = 157/190 (82%) Strand = Plus / Plus Query: 310 cccgccgagctcccctcgcctcatatggagagtgtttgtgagaacaccacaactgccgat 369 |||| ||| ||||||||||||| ||||| || |||||||||||||| ||| |||| ||| Sbjct: 344 cccgacgaactcccctcgcctcggatggaaagagtttgtgagaacactacagctgctgat 403 Query: 370 ttcaagcagagtaacttcagcaatttccttccaagtgttagatcaggcggttggtcagat 429 |||||||| | ||| | | ||||| | |||| | || |||| || | |||||| ||| Sbjct: 404 ttcaagcaaaataagtctggtaattttgtcccaaatattcgatctggggattggtcggat 463 Query: 430 attggaagccgccagtacatggaagatacccatgtgtgtattgccgacctagctaaaaac 489 |||||| | || || ||||||||||||||||||||||||||| | ||||||||||| ||| Sbjct: 464 attggaggtcgtcaatacatggaagatacccatgtgtgtattactgacctagctaagaac 523 Query: 490 tttggttatc 499 |||||||||| Sbjct: 524 tttggttatc 533
>ref|XM_476319.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 Score = 99.6 bits (50), Expect = 9e-18 Identities = 137/166 (82%) Strand = Plus / Plus Query: 334 atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 393 ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| | | ||| Sbjct: 202 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 261 Query: 394 ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 453 || | |||| | || |||| || | |||||| ||||||||| | || || ||||||||| Sbjct: 262 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 321 Query: 454 gatacccatgtgtgtattgccgacctagctaaaaactttggttatc 499 |||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 322 gatacccatgtgtgtattactgacctagctaagaactttggttatc 367
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 99.6 bits (50), Expect = 9e-18 Identities = 137/166 (82%) Strand = Plus / Minus Query: 334 atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 393 ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| | | ||| Sbjct: 3961082 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 3961023 Query: 394 ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 453 || | |||| | || |||| || | |||||| ||||||||| | || || ||||||||| Sbjct: 3961022 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 3960963 Query: 454 gatacccatgtgtgtattgccgacctagctaaaaactttggttatc 499 |||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 3960962 gatacccatgtgtgtattactgacctagctaagaactttggttatc 3960917 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 aggccggcatgcgcgcggacgacgccgg 275 |||||||| |||||||||||||||||| Sbjct: 23996643 aggccggccggcgcgcggacgacgccgg 23996616
>dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 99.6 bits (50), Expect = 9e-18 Identities = 137/166 (82%) Strand = Plus / Minus Query: 334 atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 393 ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| | | ||| Sbjct: 4737 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 4678 Query: 394 ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 453 || | |||| | || |||| || | |||||| ||||||||| | || || ||||||||| Sbjct: 4677 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 4618 Query: 454 gatacccatgtgtgtattgccgacctagctaaaaactttggttatc 499 |||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 4617 gatacccatgtgtgtattactgacctagctaagaactttggttatc 4572
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 99.6 bits (50), Expect = 9e-18 Identities = 137/166 (82%) Strand = Plus / Minus Query: 334 atggagagtgtttgtgagaacaccacaactgccgatttcaagcagagtaacttcagcaat 393 ||||| || |||||||||||||| ||| |||| ||||||||||| | ||| | | ||| Sbjct: 66958 atggaaagagtttgtgagaacactacagctgctgatttcaagcaaaataagtctggtaat 66899 Query: 394 ttccttccaagtgttagatcaggcggttggtcagatattggaagccgccagtacatggaa 453 || | |||| | || |||| || | |||||| ||||||||| | || || ||||||||| Sbjct: 66898 tttgtcccaaatattcgatctggggattggtcggatattggaggtcgtcaatacatggaa 66839 Query: 454 gatacccatgtgtgtattgccgacctagctaaaaactttggttatc 499 |||||||||||||||||| | ||||||||||| ||||||||||||| Sbjct: 66838 gatacccatgtgtgtattactgacctagctaagaactttggttatc 66793
>ref|NM_190685.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gcgcgcggacgacgccgggaggc 280 ||||||||||||||||||||||| Sbjct: 249 gcgcgcggacgacgccgggaggc 227
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 154 tctcccctccccctctccgcttt 176 ||||||||||||||||||||||| Sbjct: 24284463 tctcccctccccctctccgcttt 24284485
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gcgcgcggacgacgccgggaggc 280 ||||||||||||||||||||||| Sbjct: 37127346 gcgcgcggacgacgccgggaggc 37127324 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcttctcccctccccctctc 170 |||||||||||||||||||| Sbjct: 2396292 tcttctcccctccccctctc 2396273
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gcgcgcggacgacgccgggaggc 280 ||||||||||||||||||||||| Sbjct: 2002 gcgcgcggacgacgccgggaggc 1980
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gcgcgcggacgacgccgggaggc 280 ||||||||||||||||||||||| Sbjct: 128487 gcgcgcggacgacgccgggaggc 128465
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 154 tctcccctccccctctccgcttt 176 ||||||||||||||||||||||| Sbjct: 150802 tctcccctccccctctccgcttt 150824
>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686H11 Length = 135273 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 154 tctcccctccccctctccgcttt 176 ||||||||||||||||||||||| Sbjct: 24767 tctcccctccccctctccgcttt 24789
>dbj|AK107493.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-D04, full insert sequence Length = 1617 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 gcgcgcggacgacgccgggaggc 280 ||||||||||||||||||||||| Sbjct: 385 gcgcgcggacgacgccgggaggc 363
>emb|CT010475.5| Mouse DNA sequence from clone RP23-386L14 on chromosome 13, complete sequence Length = 202971 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 155 ctcccctccccctctccgcttttcctcctc 184 ||||||||||||||||| | |||||||||| Sbjct: 147003 ctcccctccccctctccccctttcctcctc 146974
>gb|AC123936.4| Mus musculus BAC clone RP23-408L3 from chromosome 15, complete sequence Length = 221204 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 200099 cttcttcttcttcctttccctc 200078
>gb|AC123063.4| Mus musculus BAC clone RP23-219I20 from 5, complete sequence Length = 204795 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 123988 cttcttcttcttcctttccctc 124009
>gb|AC104897.7| Mus musculus chromosome 12, clone RP23-300E12, complete sequence Length = 194600 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 57901 cttcttcttcttcctttccctc 57922
>gb|AC155317.5| Mus musculus BAC clone RP23-89D6 from chromosome 15, complete sequence Length = 251377 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 14606 cttcttcttcttcctttccctc 14585
>emb|AL445065.1|TACID3 Thermoplasma acidophilum complete genome; segment 3/5 Length = 316900 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 47558 cttcttcttcttcctttccctc 47579
>emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chromosome 11 Contains the Akap1 gene for A kinase (PRKA) anchor protein 1, complete sequence Length = 76410 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 62687 cttcttcttcttcctttccctc 62708
>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence Length = 205302 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 143595 cttcttcttcttcctttccctc 143574
>emb|CR974580.6| Mouse DNA sequence from clone RP23-97P6 on chromosome 12, complete sequence Length = 197896 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 cttcttcttcttcctttccctc 30 |||||||||||||||||||||| Sbjct: 161008 cttcttcttcttcctttccctc 160987
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 cctcaaccttcttcttcttcctttc 26 |||| |||||||||||||||||||| Sbjct: 44734 cctccaccttcttcttcttcctttc 44710
>gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosome 5, complete sequence Length = 181004 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 ccgccgagctcccctcgcctc 331 ||||||||||||||||||||| Sbjct: 122547 ccgccgagctcccctcgcctc 122527
>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence Length = 231059 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 cctcaaccttcttcttcttcctttc 26 |||| |||||||||||||||||||| Sbjct: 111097 cctccaccttcttcttcttcctttc 111121
>gb|AC122378.4| Mus musculus BAC clone RP23-474C9 from chromosome 15, complete sequence Length = 203662 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ttcttctcccctccccctctc 170 ||||||||||||||||||||| Sbjct: 133659 ttcttctcccctccccctctc 133639
>gb|AC121572.2| Mus musculus BAC clone RP23-234P16 from 5, complete sequence Length = 136697 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 ccgccgagctcccctcgcctc 331 ||||||||||||||||||||| Sbjct: 111056 ccgccgagctcccctcgcctc 111076
>gb|AC164704.4| Mus musculus BAC clone RP23-238D20 from chromosome 6, complete sequence Length = 189119 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttccc 28 ||||||||||||||||||||| Sbjct: 60128 ccttcttcttcttcctttccc 60108
>gb|AC126013.12| Medicago truncatula clone mth2-32e10, complete sequence Length = 116778 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 cttcttcttcttcctttccctcgcc 33 |||||||||||||||||| |||||| Sbjct: 13025 cttcttcttcttcctttctctcgcc 13049
>gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome 18, complete sequence Length = 196879 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cttcttcttcttcctttccct 29 ||||||||||||||||||||| Sbjct: 152200 cttcttcttcttcctttccct 152180
>emb|AL357376.16| Human DNA sequence from clone RP11-43G16 on chromosome 6, complete sequence Length = 45386 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 ttcttcttcttcctttccctc 30 ||||||||||||||||||||| Sbjct: 41213 ttcttcttcttcctttccctc 41233
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcctttccctcg 31 ||||||||||||||||||||| Sbjct: 39276 tcttcttcttcctttccctcg 39256
>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a novel gene, complete sequence Length = 226006 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 ctcccctccccctctccgcttttcc 179 |||||||||||||||||| |||||| Sbjct: 70905 ctcccctccccctctccgtttttcc 70881
>gb|AC010343.7| Homo sapiens chromosome 5 clone CTD-2017D15, complete sequence Length = 133836 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 acctagctaaaaactttggtt 496 ||||||||||||||||||||| Sbjct: 31157 acctagctaaaaactttggtt 31137
>gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosome 12, complete sequence Length = 202315 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttccc 28 ||||||||||||||||||||| Sbjct: 43564 ccttcttcttcttcctttccc 43544
>gb|AC022443.5| Homo sapiens chromosome 5 clone RP11-36C20, complete sequence Length = 126867 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 acctagctaaaaactttggtt 496 ||||||||||||||||||||| Sbjct: 122237 acctagctaaaaactttggtt 122257
>ref|NM_062807.3| Caenorhabditis elegans associated with RAN (nuclear import/export) function family member (ran-5) (ran-5) mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 accttcttcttcttcctttcc 27 ||||||||||||||||||||| Sbjct: 902 accttcttcttcttcctttcc 882
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 245 tgcaggccggcatgcgcgcgg 265 ||||||||||||||||||||| Sbjct: 1008038 tgcaggccggcatgcgcgcgg 1008018
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcctttccctcg 31 ||||||||||||||||||||| Sbjct: 19388022 tcttcttcttcctttccctcg 19388002
>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence Length = 192176 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 6 aaccttcttcttcttcctttccctc 30 |||||||| |||||||||||||||| Sbjct: 110022 aaccttctccttcttcctttccctc 110046
>gb|U23510.3| Caenorhabditis elegans cosmid R12C12, complete sequence Length = 40506 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 accttcttcttcttcctttcc 27 ||||||||||||||||||||| Sbjct: 28052 accttcttcttcttcctttcc 28032
>gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, complete sequence Length = 222413 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ttcttctcccctccccctctc 170 ||||||||||||||||||||| Sbjct: 144452 ttcttctcccctccccctctc 144432
>gb|AC102895.7| Mus musculus chromosome 15, clone RP24-356D22, complete sequence Length = 165778 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 tcttctcccctccccctctcc 171 ||||||||||||||||||||| Sbjct: 57083 tcttctcccctccccctctcc 57103
>gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, complete sequence Length = 213866 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ttcttctcccctccccctctc 170 ||||||||||||||||||||| Sbjct: 49736 ttcttctcccctccccctctc 49716
>emb|AL845265.20| Mouse DNA sequence from clone RP23-158O8 on chromosome 2, complete sequence Length = 195031 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 attattcttctcccctccccc 166 ||||||||||||||||||||| Sbjct: 121120 attattcttctcccctccccc 121140
>gb|AC132348.3| Mus musculus BAC clone RP24-187H4 from 6, complete sequence Length = 158440 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttccc 28 ||||||||||||||||||||| Sbjct: 111086 ccttcttcttcttcctttccc 111066
>emb|CT009635.18| Mouse DNA sequence from clone RP23-109E18 on chromosome 17, complete sequence Length = 216634 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 tcttctcccctccccctctcc 171 ||||||||||||||||||||| Sbjct: 138213 tcttctcccctccccctctcc 138233
>ref|NM_101863.2| Arabidopsis thaliana ROP2; GTP binding AT1G20090 (ROP2) mRNA, complete cds Length = 1188 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tcaaccttcttcttcttcctttcc 27 |||||||||||||||||| ||||| Sbjct: 80 tcaaccttcttcttcttcttttcc 103
>ref|NM_106152.2| Arabidopsis thaliana unknown protein AT1G74940 mRNA, complete cds Length = 1007 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 91 ccttcttcttcttcctttcc 110
>ref|NM_106085.1| Arabidopsis thaliana heat shock protein binding / nucleic acid binding / unfolded protein binding / zinc ion binding AT1G74250 mRNA, complete cds Length = 1893 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcctttccctc 30 |||||||||||||||||||| Sbjct: 784 tcttcttcttcctttccctc 765
>gb|AC109196.12| Mus musculus chromosome 5, clone RP23-313F5, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 23871 cttctcccctccccctctcc 23890
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 204433 cttctcccctccccctctcc 204452
>gb|AC133103.5| Mus musculus BAC clone RP23-226J10 from chromosome 1, complete sequence Length = 241735 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 tattcttctcccctccccctctcc 171 |||||||| ||||||||||||||| Sbjct: 210780 tattcttcacccctccccctctcc 210803
>gb|AC165961.2| Mus musculus BAC clone RP23-378M19 from chromosome 16, complete sequence Length = 211284 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 63853 cttctcccctccccctctcc 63872
>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence Length = 177269 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 109467 cttctcccctccccctctcc 109486
>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 245677 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 221831 cttctcccctccccctctcc 221812
>gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, complete sequence Length = 177753 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctcaaccttcttcttcttccttt 25 |||||||||||| ||||||||||| Sbjct: 41776 cctcaaccttctccttcttccttt 41753
>ref|XM_369330.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06134.4) partial mRNA Length = 2019 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 gccggagcgcagaagcccgc 314 |||||||||||||||||||| Sbjct: 997 gccggagcgcagaagcccgc 1016
>ref|XM_363342.1| Magnaporthe grisea 70-15 hypothetical protein (MG01268.4) partial mRNA Length = 1461 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 acctcaaccttcttcttctt 20 |||||||||||||||||||| Sbjct: 164 acctcaaccttcttcttctt 145
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 3559 cttctcccctccccctctcc 3578
>gb|AC125149.4| Mus musculus BAC clone RP24-354E17 from chromosome 1, complete sequence Length = 169725 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 tattcttctcccctccccctctcc 171 |||||||| ||||||||||||||| Sbjct: 86780 tattcttcccccctccccctctcc 86757
>gb|AC135672.4| Mus musculus BAC clone RP23-449K22 from chromosome 9, complete sequence Length = 162356 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 158350 cttctcccctccccctctcc 158369
>gb|AC123856.4| Mus musculus BAC clone RP23-341H24 from chromosome 1, complete sequence Length = 226881 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 tattcttctcccctccccctctcc 171 |||||||| ||||||||||||||| Sbjct: 178465 tattcttcccccctccccctctcc 178488
>gb|AC154670.2| Mus musculus BAC clone RP24-293L9 from chromosome 14, complete sequence Length = 163908 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 19294 cttctcccctccccctctcc 19313
>gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173015 Score = 40.1 bits (20), Expect = 6.8 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 155 ctcccctccccctctccgcttttcctcctcgt 186 ||||||||||||||||| || ||||||||||| Sbjct: 97012 ctcccctccccctctcc-ctcttcctcctcgt 96982
>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence Length = 243671 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 44170 cttctcccctccccctctcc 44151 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 44127 cttctcccctccccctctcc 44108
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 attcttctcccctccccctc 168 |||||||||||||||||||| Sbjct: 149855 attcttctcccctccccctc 149836
>gb|AC123850.3| Mus musculus BAC clone RP23-319K22 from chromosome 5, complete sequence Length = 200934 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 146847 cttctcccctccccctctcc 146828
>ref|XM_566495.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA00700) partial mRNA Length = 1556 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 1403 cttctcccctccccctctcc 1384
>gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome 5, complete sequence Length = 238781 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 229686 cttctcccctccccctctcc 229667
>gb|AC118038.15| Mus musculus chromosome 15, clone RP23-87G17, complete sequence Length = 209907 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 cctcaaccttcttcttcttccttt 25 |||||||||||| ||||||||||| Sbjct: 206024 cctcaaccttctccttcttccttt 206001
>ref|XM_809529.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510715.40) partial mRNA Length = 804 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcctttccctc 30 |||||||||||||||||||| Sbjct: 401 tcttcttcttcctttccctc 382
>gb|AC127260.3| Mus musculus BAC clone RP24-315I3 from chromosome 3, complete sequence Length = 177195 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 106929 cttctcccctccccctctcc 106948
>emb|Z32681.1|CEF56F3 Caenorhabditis elegans Cosmid F56F3, complete sequence Length = 29039 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 accttcttcttcttcctttccctc 30 ||||||||||||||| |||||||| Sbjct: 4675 accttcttcttcttcttttccctc 4652
>ref|XM_816897.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508221.170) partial mRNA Length = 786 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcctttccctc 30 |||||||||||||||||||| Sbjct: 401 tcttcttcttcctttccctc 382
>gb|AC125037.4| Mus musculus BAC clone RP23-332H20 from chromosome 3, complete sequence Length = 207842 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 164550 cttctcccctccccctctcc 164531
>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence Length = 210148 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 103912 cttctcccctccccctctcc 103931
>gb|AC121574.3| Mus musculus BAC clone RP23-241E9 from 14, complete sequence Length = 209230 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 162339 cttctcccctccccctctcc 162358
>gb|AC125183.4| Mus musculus BAC clone RP23-297M4 from 5, complete sequence Length = 221622 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 219747 cttctcccctccccctctcc 219766
>gb|AC122875.2| Mus musculus BAC clone RP23-113B22 from 5, complete sequence Length = 152406 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 91002 cttctcccctccccctctcc 91021
>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence Length = 124554 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 cctcaaccttcttcttcttc 21 |||||||||||||||||||| Sbjct: 113689 cctcaaccttcttcttcttc 113708
>emb|AL512408.12| Human DNA sequence from clone RP5-968P14 on chromosome 1 Contains the 5' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1) and a CpG island, complete sequence Length = 64214 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ttattcttctcccctccccc 166 |||||||||||||||||||| Sbjct: 46695 ttattcttctcccctccccc 46714
>gb|AC104644.3| Homo sapiens chromosome 3 clone RP11-281N1, complete sequence Length = 187620 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tcatatggagagtgtttgtg 349 |||||||||||||||||||| Sbjct: 51318 tcatatggagagtgtttgtg 51299
>emb|AL121826.11|HS1010E17 Human DNA sequence from clone RP5-1010E17 on chromosome 20 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 126045 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 68851 ccttcttcttcttcctttcc 68832
>gb|AF520810.1| Nicotiana tabacum DNA-binding protein phosphatase 2C (DBP1) mRNA, complete cds Length = 1504 Score = 40.1 bits (20), Expect = 6.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 448 atggaagatacccatgtgtgtattgccgacctagctaaaaactttggt 495 ||||||||||| ||| | |||||||| ||||| ||||| || |||||| Sbjct: 391 atggaagatactcatatttgtattgcggacctggctaagaattttggt 438
>emb|AL109753.9|HSJ875J14 Human DNA sequence from clone RP5-875J14 on chromosome Xq13.1-21.1 Contains the 3' end of the ATRX gene for alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae), complete sequence Length = 148423 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcttctcccctccccctctc 170 |||||||||||||||||||| Sbjct: 58008 tcttctcccctccccctctc 57989
>gb|BT000460.1| Arabidopsis thaliana expressed protein (At1g74940) mRNA, complete cds Length = 963 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 91 ccttcttcttcttcctttcc 110
>emb|Z74210.1|SCYDL162C S.cerevisiae chromosome IV reading frame ORF YDL162c Length = 3151 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 929 ccttcttcttcttcctttcc 910
>emb|Z67750.1|SC41KCIV S.cerevisiae DNA (cosmid 31A2; chromosome IV; 41 kb) Length = 41175 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 34230 ccttcttcttcttcctttcc 34211
>gb|AF360154.1| Arabidopsis thaliana putative RAC GTP-binding protein ARAC4 (At1g20090) mRNA, complete cds Length = 1226 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tcaaccttcttcttcttcctttcc 27 |||||||||||||||||| ||||| Sbjct: 80 tcaaccttcttcttcttcttttcc 103
>emb|AL162351.1|ATT20L15 Arabidopsis thaliana DNA chromosome 5, BAC clone T20L15 (ESSA project) Length = 96565 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcctttccctc 30 |||||||||||||||||||| Sbjct: 48125 tcttcttcttcctttccctc 48144
>emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chromosome 11 Contains the Nog gene for noggin, the 3' end of the gene for a novel protein (4932411E22Rik) and one CpG island, complete sequence Length = 212341 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 67176 cttctcccctccccctctcc 67157
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 tcttcttcttcctttccctc 30 |||||||||||||||||||| Sbjct: 19881 tcttcttcttcctttccctc 19862
>gb|AC020906.6| Homo sapiens chromosome 19 clone CTB-83J15, complete sequence Length = 110184 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 atacccatgtgtgtattgcc 474 |||||||||||||||||||| Sbjct: 91760 atacccatgtgtgtattgcc 91741
>gb|AC124046.2| Homo sapiens chromosome 3 clone RP11-352B8, complete sequence Length = 166496 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tcatatggagagtgtttgtg 349 |||||||||||||||||||| Sbjct: 131015 tcatatggagagtgtttgtg 130996
>gb|AC115393.5| Rattus norvegicus BAC CH230-103E13 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 243316 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tcccctccccctctccgctt 175 |||||||||||||||||||| Sbjct: 88003 tcccctccccctctccgctt 87984
>gb|AC068627.16| Mus Musculus Chromosome 5 RP23-389F6, complete sequence Length = 180673 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 85673 cttctcccctccccctctcc 85654
>gb|AC099540.2| Homo sapiens chromosome 3 clone RP11-353D4, complete sequence Length = 167799 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cttcttcttcttcctttccc 28 |||||||||||||||||||| Sbjct: 89913 cttcttcttcttcctttccc 89894
>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete sequence Length = 100745 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ttcttcttcttcctttccct 29 |||||||||||||||||||| Sbjct: 44646 ttcttcttcttcctttccct 44627
>gb|AC104633.2| Homo sapiens chromosome 3 clone RP11-118O11, complete sequence Length = 160172 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 tcatatggagagtgtttgtg 349 |||||||||||||||||||| Sbjct: 86753 tcatatggagagtgtttgtg 86772
>gb|AY898621.1| Suillus bellinii isolate CCMA-22 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 754 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cttcctttccctcgccggat 37 |||||||||||||||||||| Sbjct: 39 cttcctttccctcgccggat 20
>gb|AC097674.6| Rattus norvegicus 2 CH230-75D18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227596 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 109413 cttctcccctccccctctcc 109432
>gb|AC160337.2| Mus musculus BAC clone RP23-193N1 from chromosome 9, complete sequence Length = 204712 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 86558 cttctcccctccccctctcc 86577
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence Length = 167114 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 attcttctcccctccccctc 168 |||||||||||||||||||| Sbjct: 140592 attcttctcccctccccctc 140611
>gb|BC060095.1| Mus musculus RIKEN cDNA 1300012G16 gene, mRNA (cDNA clone IMAGE:6400361) Length = 4654 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 2202 cttctcccctccccctctcc 2221
>emb|AJ419216.1|SBE419216 Suillus bellinii 18S rRNA gene, 5.8S rRNA gene, 28S rRNA gene, internal transcribed spacer 1 (ITS1) and internal transcribed spacer 2 (ITS2), isolate MA-Fungi 47685 Length = 613 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cttcctttccctcgccggat 37 |||||||||||||||||||| Sbjct: 36 cttcctttccctcgccggat 17
>emb|CR376864.1| Pan troglodytes chromosome X BAC PTB-045G22, complete sequence Length = 151492 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcttctcccctccccctctc 170 |||||||||||||||||||| Sbjct: 88866 tcttctcccctccccctctc 88885
>gb|AC131009.7| Homo sapiens 12 BAC RP11-417L19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170327 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ctcccctccccctctccgct 174 |||||||||||||||||||| Sbjct: 13710 ctcccctccccctctccgct 13691
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcttcttcttcctttccctc 30 |||||||||||||||||||| Sbjct: 31844 tcttcttcttcctttccctc 31863
>gb|AC013258.5|AC013258 Arabidopsis thaliana chromosome 1 BAC F9E10 genomic sequence, complete sequence Length = 97263 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 57218 ccttcttcttcttcctttcc 57199
>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence Length = 229472 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 tattcttctcccctccccctctcc 171 |||||||| ||||||||||||||| Sbjct: 142874 tattcttcccccctccccctctcc 142897
>gb|AF115471.1|AF115471 Arabidopsis thaliana cultivar Landsberg erecta Arac4 (Arac4) gene, complete cds Length = 1794 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tcaaccttcttcttcttcctttcc 27 |||||||||||||||||| ||||| Sbjct: 12 tcaaccttcttcttcttcttttcc 35
>gb|BC033844.1| Homo sapiens, clone IMAGE:4523945, mRNA Length = 2033 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ttattcttctcccctccccc 166 |||||||||||||||||||| Sbjct: 40 ttattcttctcccctccccc 59
>gb|AC010881.8| Homo sapiens BAC clone RP11-289J14 from 2, complete sequence Length = 174927 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tccttccaagtgttagatca 414 |||||||||||||||||||| Sbjct: 52207 tccttccaagtgttagatca 52188
>gb|AY086389.1| Arabidopsis thaliana clone 24864 mRNA, complete sequence Length = 929 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 59 ccttcttcttcttcctttcc 78
>gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23G24, complete sequence Length = 197264 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 174679 cttctcccctccccctctcc 174660
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tcaaccttcttcttcttcctttcc 27 |||||||||||||||||| ||||| Sbjct: 44904 tcaaccttcttcttcttcttttcc 44881
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcttctcccctccccctctc 170 |||||||||||||||||||| Sbjct: 125342 tcttctcccctccccctctc 125323
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 aggccggcatgcgcgcggacgacgccgg 275 |||||||| |||||||||||||||||| Sbjct: 126254 aggccggccggcgcgcggacgacgccgg 126227
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 aggccggcatgcgcgcggacgacgccgg 275 |||||||| |||||||||||||||||| Sbjct: 6336 aggccggccggcgcgcggacgacgccgg 6309
>dbj|AK119501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E08, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 248 aggccggcatgcgcgcggacgacgccgg 275 |||||||| |||||||||||||||||| Sbjct: 360 aggccggccggcgcgcggacgacgccgg 333
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence Length = 115721 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccttcttcttcttcctttcc 27 |||||||||||||||||||| Sbjct: 28881 ccttcttcttcttcctttcc 28862
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 attcttctcccctccccctc 168 |||||||||||||||||||| Sbjct: 165666 attcttctcccctccccctc 165647
>dbj|AP003403.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-750J5, complete sequence Length = 183902 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 accttcttcttcttcctttccctc 30 ||||||||| |||||||||||||| Sbjct: 159372 accttcttcctcttcctttccctc 159395
>gb|U45236.1|ATU45236 Arabidopsis thaliana rac-like protein (ARAC4) mRNA, complete cds Length = 1160 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tcaaccttcttcttcttcctttcc 27 |||||||||||||||||| ||||| Sbjct: 69 tcaaccttcttcttcttcttttcc 92
>emb|AL807807.11| Mouse DNA sequence from clone RP23-284L15 on chromosome 4, complete sequence Length = 171570 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 cccctccccctctccgcttttcctcctc 184 ||||||||||||||| |||| ||||||| Sbjct: 151569 cccctccccctctcccctttccctcctc 151596
>emb|CT009704.12| Mouse DNA sequence from clone RP23-115B21 on chromosome 16, complete sequence Length = 226520 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cctccccctctccgcttttcctcc 182 ||||||||||||| |||||||||| Sbjct: 77295 cctccccctctccccttttcctcc 77318
>gb|AC132444.3| Mus musculus BAC clone RP23-160D6 from 8, complete sequence Length = 206961 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 tattcttctcccctccccctctcc 171 |||||||| ||||||||||||||| Sbjct: 190961 tattcttcccccctccccctctcc 190938
>gb|AC137155.3| Mus musculus BAC clone RP23-66E11 from 12, complete sequence Length = 211064 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 132835 cttctcccctccccctctcc 132816 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 132792 cttctcccctccccctctcc 132773
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 105108 cttctcccctccccctctcc 105089
>emb|AL773580.11| Mouse DNA sequence from clone RP23-26G3 on chromosome X, complete sequence Length = 210533 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttctcccctccccctctcc 171 |||||||||||||||||||| Sbjct: 129049 cttctcccctccccctctcc 129068
>emb|AL627072.17| Mouse DNA sequence from clone RP23-432B19 on chromosome 4, complete sequence Length = 208805 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ttattcttctcccctccccc 166 |||||||||||||||||||| Sbjct: 172983 ttattcttctcccctccccc 172964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,755,441 Number of Sequences: 3902068 Number of extensions: 4755441 Number of successful extensions: 151096 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 150225 Number of HSP's gapped (non-prelim): 872 length of query: 505 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 483 effective length of database: 17,147,199,772 effective search space: 8282097489876 effective search space used: 8282097489876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)