>PRAF1_HUMAN (Q9UI14) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
 Frame = +3

Query: 228 KRSLSGARPWPELLDRAALSRPDSLSDATARLRKNLAYFRVNYXXXXXXXXXXXXXXHPF 407
           +R  +  RPW   +D+   SRP +L +   RL +N+ Y++ NY               P 
Sbjct: 36  ERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPM 95

Query: 408 SXXXXXXXXXXWCFLYILRPADAAPLAAFGRTFS--DRETLGGLIAASVFVVFLTSVGGI 581
                       C++  LR  + + L  FGR  S   +  L G I+   F  +L   G  
Sbjct: 96  LLVALAVFFGA-CYILYLRTLE-SKLVLFGREVSPAHQYALAGGISFPFF--WLAGAGSA 151

Query: 582 IFSAL 596
           +F  L
Sbjct: 152 VFWVL 156

>PRAF1_CANFA (Q8HY39) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 37.7 bits (86), Expect = 0.026
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
 Frame = +3

Query: 171 ASPDPAATRAFLGRLYDSA------KRSLSGARPWPELLDRAALSRPDSLSDATARLRKN 332
           A P+  +    L +L  S       +R  +  RPW   +D+   SRP +L +   RL +N
Sbjct: 11  AEPEGLSATTLLPKLIPSGAGRERLERRRATIRPWSSFVDQRRFSRPRNLGELCQRLVRN 70

Query: 333 LAYFRVNY 356
           + Y++ NY
Sbjct: 71  VEYYQSNY 78

>PRAF1_RAT (O35394) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
          Length = 185

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 28/123 (22%), Positives = 44/123 (35%)
 Frame = +3

Query: 228 KRSLSGARPWPELLDRAALSRPDSLSDATARLRKNLAYFRVNYXXXXXXXXXXXXXXHPF 407
           +R  +  RPW   +D+   SRP ++ +   RL +N+ Y++ NY               P 
Sbjct: 36  ERRRATIRPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPM 95

Query: 408 SXXXXXXXXXXWCFLYILRPADAAPLAAFGRTFSDRETLGGLIAASVFVVFLTSVGGIIF 587
                       C++  LR    + L  FGR  S           S    +L   G  +F
Sbjct: 96  LLVALAVFFGA-CYILYLRTLQ-SKLVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVF 153

Query: 588 SAL 596
             L
Sbjct: 154 WVL 156

>PRAF1_MOUSE (Q9Z0S9) Prenylated Rab acceptor protein 1 (PRA1 family protein 1)|
           (Prenylin)
          Length = 185

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 28/123 (22%), Positives = 44/123 (35%)
 Frame = +3

Query: 228 KRSLSGARPWPELLDRAALSRPDSLSDATARLRKNLAYFRVNYXXXXXXXXXXXXXXHPF 407
           +R  +  RPW   +D+   SRP ++ +   RL +N+ Y++ NY               P 
Sbjct: 36  ERRRATIRPWGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPM 95

Query: 408 SXXXXXXXXXXWCFLYILRPADAAPLAAFGRTFSDRETLGGLIAASVFVVFLTSVGGIIF 587
                       C++  LR    + L  FGR  S           S    +L   G  +F
Sbjct: 96  LLVALAVFFGA-CYILYLRTLQ-SKLVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVF 153

Query: 588 SAL 596
             L
Sbjct: 154 WVL 156

>PRA1_SCHPO (Q9UUN5) PRA1-like protein|
          Length = 171

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +3

Query: 213 LYDSAKRSLSGARPWPELLDRAALSRPDSLSDATARLRKNLAYFRVNY 356
           +Y S  + LSG +   E LD   +SRP + S+A +R+  N + F  NY
Sbjct: 18  IYASRAQYLSGFKSVGEFLDVRRISRPRNFSEAQSRISFNFSRFSSNY 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,845,375
Number of Sequences: 219361
Number of extensions: 327340
Number of successful extensions: 1538
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)