ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart13h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 8e-74
2dbj|AK070272.1| Oryza sativa (japonica cultivar-group) cDNA clon... 283 3e-73
3gb|AY106509.1| Zea mays PCO111208 mRNA sequence 281 1e-72
4ref|NM_188280.1| Oryza sativa (japonica cultivar-group), predic... 260 5e-66
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
6dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 157 5e-35
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
8dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
9dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
10gb|AE006108.1| Pasteurella multocida subsp. multocida str. Pm70 ... 44 0.50
11emb|AJ277636.1|PMU277636 Pasteurella multocida mapB gene 44 0.50
12gb|AC123703.8| Mus musculus chromosome 3, clone RP23-345N18, com... 42 2.0
13gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
14ref|XM_418446.1| PREDICTED: Gallus gallus similar to otoferlin (... 42 2.0
15gb|AC127294.4| Mus musculus BAC clone RP23-386L1 from chromosome... 42 2.0
16emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 42 2.0
17dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 42 2.0
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
19dbj|D44468.1|ASNCMDA Aspergillus oryzae cmdA gene for calmodulin... 42 2.0
20gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 7.9
21gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.9
22emb|Z75712.1|CEK04G2 Caenorhabditis elegans Cosmid K04G2, comple... 40 7.9
23gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete s... 40 7.9
24emb|AJ007827.1|PTO7827 Pseudomonas tolaasii eprA, eprI, eprD, ep... 40 7.9
25emb|X82489.1|MCPPD M.crystallinum ppd gene 40 7.9
26emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.9
27gb|AC159460.9| Mus musculus chromosome 15, clone RP24-306N20, co... 40 7.9
28emb|AJ005840.1|TAE5840 Triticum aestivum mRNA for thioredoxin M 40 7.9
29dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 7.9
30ref|XM_678887.1| PREDICTED: Danio rerio similar to collagen, typ... 40 7.9
31emb|BX510367.7| Zebrafish DNA sequence from clone DKEY-117M4 in ... 40 7.9
32gb|AF004848.2| Pseudomonas fluorescens alkaline protease, protea... 40 7.9
33gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.9
34emb|BX825572.1|CNS0A7PA Arabidopsis thaliana Full-length cDNA Co... 40 7.9
35gb|AY106373.1| Zea mays PCO147105 mRNA sequence 40 7.9
36emb|AJ870964.1| Triticum turgidum subsp. durum mRNA for thioredo... 40 7.9
37emb|CR855328.8| Zebrafish DNA sequence from clone CH211-207D6 in... 40 7.9
38gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 7.9
39gb|L40957.1|MZETHIOM Zea mays thioredoxin M mRNA, complete cds 40 7.9
40emb|AL845283.4| Mouse DNA sequence from clone RP23-151F21 on chr... 40 7.9
41emb|AL627076.14| Mouse DNA sequence from clone RP23-402I22 on ch... 40 7.9 
>dbj|AK104558.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H08, full
           insert sequence
          Length = 1102

 Score =  285 bits (144), Expect = 8e-74
 Identities = 278/323 (86%)
 Strand = Plus / Plus

                                                                       
Query: 247 cctcatccgacgggagatccaggcggtgctcgtcttcctggtgctcttcacggtgaagat 306
           |||| |||| |||||||||||||||||||||   ||||| |||||||||   ||||||||
Sbjct: 205 cctcctccgccgggagatccaggcggtgctcacgttcctcgtgctcttcgtcgtgaagat 264

                                                                       
Query: 307 tgtgaaggaggaacactgggaaacattcatcgctgattcattgctctatgcaaagggcct 366
            ||||| |||||| |||||||||||| ||| ||||||||| |||||||||| |||||  |
Sbjct: 265 cgtgaaagaggaaaactgggaaacatgcattgctgattcactgctctatgctaagggatt 324

                                                                       
Query: 367 cttgttggtggttacttttgttattgattattggttgactgtcggctacttactgggatt 426
            ||| |||  |||||||| ||||| ||||||||| ||||||||  |||||||||||||||
Sbjct: 325 attgctggcagttactttggttatcgattattggctgactgtctcctacttactgggatt 384

                                                                       
Query: 427 tattgttatatatgctatggctcaacagccaccttatgatggtacaggtcatttaagtca 486
           | |||||||||||||| | ||||||||||||||||||||||||   ||||||| || |||
Sbjct: 385 tgttgttatatatgctgttgctcaacagccaccttatgatggtcttggtcattcaaatca 444

                                                                       
Query: 487 attgaccccgttacaactggaaagcctgctaactgaagagccnacaacacgattttggct 546
            ||||| || || ||||||||| |||| ||||| || ||||| |||||||||||||||||
Sbjct: 445 tttgactccattgcaactggaaggcctactaacggaggagccaacaacacgattttggct 504

                                  
Query: 547 ggttgagttccggacttcctttt 569
           |||||| ||||||||||||||||
Sbjct: 505 ggttgaattccggacttcctttt 527



 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Plus

                                                                       
Query: 117 acccgttcccgtggctcgacgtggccatctcggagccctactacttcctccacctcatcg 176
           |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 90  acccgttcccgtggctagacctggccatctccgagccctactacttcctccacctcgtcg 149

                                                      
Query: 177 ccttcttctcctacttcgcggcccgcaccacggcgccctcggc 219
           ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 150 ccttcttctcctacttcgcggcccgcagcacggtgccctcggc 192
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>dbj|AK070272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043M23, full
           insert sequence
          Length = 1167

 Score =  283 bits (143), Expect = 3e-73
 Identities = 274/318 (86%)
 Strand = Plus / Plus

                                                                       
Query: 252 tccgacgggagatccaggcggtgctcgtcttcctggtgctcttcacggtgaagattgtga 311
           |||| |||||||||||||||||||||   ||||| |||||||||   |||||||| ||||
Sbjct: 224 tccgccgggagatccaggcggtgctcacgttcctcgtgctcttcgtcgtgaagatcgtga 283

                                                                       
Query: 312 aggaggaacactgggaaacattcatcgctgattcattgctctatgcaaagggcctcttgt 371
           | |||||| |||||||||||| ||| ||||||||| |||||||||| |||||  | ||| 
Sbjct: 284 aagaggaaaactgggaaacatgcattgctgattcactgctctatgctaagggattattgc 343

                                                                       
Query: 372 tggtggttacttttgttattgattattggttgactgtcggctacttactgggatttattg 431
           |||  |||||||| ||||| ||||||||| ||||||||  |||||||||||||||| |||
Sbjct: 344 tggcagttactttggttatcgattattggctgactgtctcctacttactgggatttgttg 403

                                                                       
Query: 432 ttatatatgctatggctcaacagccaccttatgatggtacaggtcatttaagtcaattga 491
           ||||||||||| | ||||||||||||||||||||||||   ||||||| || ||| ||||
Sbjct: 404 ttatatatgctgttgctcaacagccaccttatgatggtcttggtcattcaaatcatttga 463

                                                                       
Query: 492 ccccgttacaactggaaagcctgctaactgaagagccnacaacacgattttggctggttg 551
           | || || ||||||||| |||| ||||| || ||||| ||||||||||||||||||||||
Sbjct: 464 ctccattgcaactggaaggcctactaacggaggagccaacaacacgattttggctggttg 523

                             
Query: 552 agttccggacttcctttt 569
           | ||||||||||||||||
Sbjct: 524 aattccggacttcctttt 541



 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Plus

                                                                       
Query: 117 acccgttcccgtggctcgacgtggccatctcggagccctactacttcctccacctcatcg 176
           |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 104 acccgttcccgtggctagacctggccatctccgagccctactacttcctccacctcgtcg 163

                                                      
Query: 177 ccttcttctcctacttcgcggcccgcaccacggcgccctcggc 219
           ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 164 ccttcttctcctacttcgcggcccgcagcacggtgccctcggc 206
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>gb|AY106509.1| Zea mays PCO111208 mRNA sequence
          Length = 874

 Score =  281 bits (142), Expect = 1e-72
 Identities = 375/453 (82%)
 Strand = Plus / Plus

                                                                       
Query: 117 acccgttcccgtggctcgacgtggccatctcggagccctactacttcctccacctcatcg 176
           |||||||||||||||| ||||  |||||||| ||||||||||||||||| || ||| |||
Sbjct: 169 acccgttcccgtggctagacgctgccatctctgagccctactacttcctgcatctcctcg 228

                                                                       
Query: 177 ccttcttctcctacttcgcggcccgcaccacggcgccctcggctgaggacgacgccgagt 236
           |||||||||| ||||| |||||||||| | |||||| ||| || || ||||  |  ||| 
Sbjct: 229 ccttcttctcttactttgcggcccgcagcgcggcgctctccgccgacgacggaggggagc 288

                                                                       
Query: 237 tccacagccgcctcatccgacgggagatccaggcggtgctcgtcttcctggtgctcttca 296
           |||||  ||||||| ||||  ||||||||||||| |||||||| ||||||||||||||| 
Sbjct: 289 tccacgaccgcctcctccgtagggagatccaggcagtgctcgtgttcctggtgctcttcg 348

                                                                       
Query: 297 cggtgaagattgtgaaggaggaacactgggaaacattcatcgctgattcattgctctatg 356
             |||||||||||||| ||||||  ||||||| || | || ||||| || ||||| ||||
Sbjct: 349 tagtgaagattgtgaaagaggaaacctgggaagcagtaattgctgactcgttgctttatg 408

                                                                       
Query: 357 caaagggcctcttgttggtggttacttttgttattgattattggttgactgtcggctact 416
           | |||||  | ||| |||  |||||||| ||||||||||  ||| || |  | | |||||
Sbjct: 409 cgaagggtttattgctggcagttactttggttattgattggtggctggcctttgcctact 468

                                                                       
Query: 417 tactgggatttattgttatatatgctatggctcaacagccaccttatgatggtacaggtc 476
           | ||||||||| |||||||||||||| | |||||||||||||||||||||||   ||| |
Sbjct: 469 ttctgggatttcttgttatatatgctgtagctcaacagccaccttatgatggcctaggcc 528

                                                                       
Query: 477 atttaagtcaattgaccccgttacaactggaaagcctgctaactgaagagccnacaacac 536
           ||| || ||| |||||||| || ||||| |||||  |||||||||||||||| ||| |||
Sbjct: 529 attcaaatcacttgaccccattgcaacttgaaagtttgctaactgaagagccaacatcac 588

                                            
Query: 537 gattttggctggttgagttccggacttcctttt 569
           ||||||||||||| || ||||| ||||| ||||
Sbjct: 589 gattttggctggtagaattccgaacttcatttt 621
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>ref|NM_188280.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 780

 Score =  260 bits (131), Expect = 5e-66
 Identities = 259/302 (85%)
 Strand = Plus / Plus

                                                                       
Query: 268 ggcggtgctcgtcttcctggtgctcttcacggtgaagattgtgaaggaggaacactggga 327
           ||||||||||   ||||| |||||||||   |||||||| ||||| |||||| |||||||
Sbjct: 183 ggcggtgctcacgttcctcgtgctcttcgtcgtgaagatcgtgaaagaggaaaactggga 242

                                                                       
Query: 328 aacattcatcgctgattcattgctctatgcaaagggcctcttgttggtggttacttttgt 387
           ||||| ||| ||||||||| |||||||||| |||||  | ||| |||  |||||||| ||
Sbjct: 243 aacatgcattgctgattcactgctctatgctaagggattattgctggcagttactttggt 302

                                                                       
Query: 388 tattgattattggttgactgtcggctacttactgggatttattgttatatatgctatggc 447
           ||| ||||||||| ||||||||  |||||||||||||||| |||||||||||||| | ||
Sbjct: 303 tatcgattattggctgactgtctcctacttactgggatttgttgttatatatgctgttgc 362

                                                                       
Query: 448 tcaacagccaccttatgatggtacaggtcatttaagtcaattgaccccgttacaactgga 507
           ||||||||||||||||||||||   ||||||| || ||| ||||| || || ||||||||
Sbjct: 363 tcaacagccaccttatgatggtcttggtcattcaaatcatttgactccattgcaactgga 422

                                                                       
Query: 508 aagcctgctaactgaagagccnacaacacgattttggctggttgagttccggacttcctt 567
           | |||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 423 aggcctactaacggaggagccaacaacacgattttggctggttgaattccggacttcctt 482

             
Query: 568 tt 569
           ||
Sbjct: 483 tt 484



 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Plus

                                                                       
Query: 117 acccgttcccgtggctcgacgtggccatctcggagccctactacttcctccacctcatcg 176
           |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 56  acccgttcccgtggctagacctggccatctccgagccctactacttcctccacctcgtcg 115

                                                      
Query: 177 ccttcttctcctacttcgcggcccgcaccacggcgccctcggc 219
           ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 116 ccttcttctcctacttcgcggcccgcagcacggtgccctcggc 158
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                           
Query: 117     acccgttcccgtggctcgacgtggccatctcggagccctactacttcctccacctcatcg 176
               |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 5441544 acccgttcccgtggctagacctggccatctccgagccctactacttcctccacctcgtcg 5441485

                                                          
Query: 177     ccttcttctcctacttcgcggcccgcaccacggcgccctcggc 219
               ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 5441484 ccttcttctcctacttcgcggcccgcagcacggtgccctcggc 5441442



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                           
Query: 472     aggtcatttaagtcaattgaccccgttacaactggaaagcctgctaactgaagagccnac 531
               |||||||| || ||| ||||| || || ||||||||| |||| ||||| || ||||| ||
Sbjct: 5437235 aggtcattcaaatcatttgactccattgcaactggaaggcctactaacggaggagccaac 5437176

                                 
Query: 532     aacacgattttggctggt 549
               ||||||||||||||||||
Sbjct: 5437175 aacacgattttggctggt 5437158



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                           
Query: 303     agattgtgaaggaggaacactgggaaacattcatcgctgattcattgctctatgcaaagg 362
               |||| ||||| |||||| |||||||||||| ||| ||||||||| |||||||||| ||||
Sbjct: 5439841 agatcgtgaaagaggaaaactgggaaacatgcattgctgattcactgctctatgctaagg 5439782



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 377     gttacttttgttattgattattggttgactgtcggctacttactgggattt 427
               |||||||| ||||| ||||||||| ||||||||  ||||||||||||||||
Sbjct: 5439567 gttactttggttatcgattattggctgactgtctcctacttactgggattt 5439517



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                      
Query: 431     gttatatatgctatggctcaacagccaccttatgatggt 469
               |||||||||||| | ||||||||||||||||||||||||
Sbjct: 5438317 gttatatatgctgttgctcaacagccaccttatgatggt 5438279



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 259     ggagatccaggcggtgctcgtcttcctggtgctcttc 295
               |||||||||||||||||||   ||||| |||||||||
Sbjct: 5441285 ggagatccaggcggtgctcacgttcctcgtgctcttc 5441249
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1015E06
          Length = 164583

 Score =  157 bits (79), Expect = 5e-35
 Identities = 97/103 (94%)
 Strand = Plus / Minus

                                                                         
Query: 117   acccgttcccgtggctcgacgtggccatctcggagccctactacttcctccacctcatcg 176
             |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||
Sbjct: 38384 acccgttcccgtggctagacctggccatctccgagccctactacttcctccacctcgtcg 38325

                                                        
Query: 177   ccttcttctcctacttcgcggcccgcaccacggcgccctcggc 219
             ||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 38324 ccttcttctcctacttcgcggcccgcagcacggtgccctcggc 38282



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                         
Query: 472   aggtcatttaagtcaattgaccccgttacaactggaaagcctgctaactgaagagccnac 531
             |||||||| || ||| ||||| || || ||||||||| |||| ||||| || ||||| ||
Sbjct: 34075 aggtcattcaaatcatttgactccattgcaactggaaggcctactaacggaggagccaac 34016

                               
Query: 532   aacacgattttggctggt 549
             ||||||||||||||||||
Sbjct: 34015 aacacgattttggctggt 33998



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                         
Query: 303   agattgtgaaggaggaacactgggaaacattcatcgctgattcattgctctatgcaaagg 362
             |||| ||||| |||||| |||||||||||| ||| ||||||||| |||||||||| ||||
Sbjct: 36681 agatcgtgaaagaggaaaactgggaaacatgcattgctgattcactgctctatgctaagg 36622



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 377   gttacttttgttattgattattggttgactgtcggctacttactgggattt 427
             |||||||| ||||| ||||||||| ||||||||  ||||||||||||||||
Sbjct: 36407 gttactttggttatcgattattggctgactgtctcctacttactgggattt 36357



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 431   gttatatatgctatggctcaacagccaccttatgatggt 469
             |||||||||||| | ||||||||||||||||||||||||
Sbjct: 35157 gttatatatgctgttgctcaacagccaccttatgatggt 35119



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 259   ggagatccaggcggtgctcgtcttcctggtgctcttc 295
             |||||||||||||||||||   ||||| |||||||||
Sbjct: 38125 ggagatccaggcggtgctcacgttcctcgtgctcttc 38089
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 162      tcctccacctcatcgccttcttctcctacttcgcg 196
                |||||| ||||||||||||||||| |||| |||||
Sbjct: 17346303 tcctcctcctcatcgccttcttcttctacctcgcg 17346337
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>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0640E12
          Length = 167353

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                 
Query: 162    tcctccacctcatcgccttcttctcctacttcgcg 196
              |||||| ||||||||||||||||| |||| |||||
Sbjct: 151428 tcctcctcctcatcgccttcttcttctacctcgcg 151462
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0434A03
          Length = 146505

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 162   tcctccacctcatcgccttcttctcctacttcgcg 196
             |||||| ||||||||||||||||| |||| |||||
Sbjct: 14527 tcctcctcctcatcgccttcttcttctacctcgcg 14561
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>gb|AE006108.1| Pasteurella multocida subsp. multocida str. Pm70 section 75 of 204 of
            the complete genome
          Length = 10903

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 30   aaaagttgaagcaggcaaaaat 51
            ||||||||||||||||||||||
Sbjct: 3940 aaaagttgaagcaggcaaaaat 3919
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>emb|AJ277636.1|PMU277636 Pasteurella multocida mapB gene
          Length = 8139

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 30   aaaagttgaagcaggcaaaaat 51
            ||||||||||||||||||||||
Sbjct: 6729 aaaagttgaagcaggcaaaaat 6750
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>gb|AC123703.8| Mus musculus chromosome 3, clone RP23-345N18, complete sequence
          Length = 197442

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                               
Query: 157    ctacttcctccacctcatcg-ccttcttctcct 188
              |||||||||||||||||| | ||||||||||||
Sbjct: 191915 ctacttcctccacctcatggtccttcttctcct 191947
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>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08,
             complete sequence
          Length = 115026

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   tactacttcctccacctcatc 175
             |||||||||||||||||||||
Sbjct: 84670 tactacttcctccacctcatc 84650
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>ref|XM_418446.1| PREDICTED: Gallus gallus similar to otoferlin (LOC420339), mRNA
          Length = 1223

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 276 tcgtcttcctggtgctcttca 296
           |||||||||||||||||||||
Sbjct: 671 tcgtcttcctggtgctcttca 691
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>gb|AC127294.4| Mus musculus BAC clone RP23-386L1 from chromosome 3, complete sequence
          Length = 212556

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                              
Query: 157   ctacttcctccacctcatcg-ccttcttctcct 188
             |||||||||||||||||| | ||||||||||||
Sbjct: 17479 ctacttcctccacctcatggtccttcttctcct 17511
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 222   aggacgacgccgagttccacagccgcctc 250
             |||||||||||||||||||| | ||||||
Sbjct: 76415 aggacgacgccgagttccacggacgcctc 76387
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 353     tatgcaaagggcctcttgttg 373
               |||||||||||||||||||||
Sbjct: 3343715 tatgcaaagggcctcttgttg 3343735
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 155      tactacttcctccacctcatc 175
                |||||||||||||||||||||
Sbjct: 26846430 tactacttcctccacctcatc 26846410
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>dbj|D44468.1|ASNCMDA Aspergillus oryzae cmdA gene for calmodulin, complete cds
          Length = 2290

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 353  tatgcaaagggcctcttgttg 373
            |||||||||||||||||||||
Sbjct: 1972 tatgcaaagggcctcttgttg 1952
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     cggcccgcaccacggcgccc 214
               ||||||||||||||||||||
Sbjct: 3378204 cggcccgcaccacggcgccc 3378185
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 185    tcctacttcgcggcccgcaccacg 208
              |||||||||||||| |||||||||
Sbjct: 659286 tcctacttcgcggcacgcaccacg 659309
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>emb|Z75712.1|CEK04G2 Caenorhabditis elegans Cosmid K04G2, complete sequence
          Length = 38259

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 327  aaacattcatcgctgattca 346
            ||||||||||||||||||||
Sbjct: 2952 aaacattcatcgctgattca 2971
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>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence
          Length = 109479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 374   gtggttacttttgttattgattat 397
             ||||||| ||||||||||||||||
Sbjct: 55061 gtggttatttttgttattgattat 55084
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>emb|AJ007827.1|PTO7827 Pseudomonas tolaasii eprA, eprI, eprD, eprE and eprF genes
          Length = 6900

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  cggcccgcaccacggcgccctcgg 218
            |||| |||||||||||||||||||
Sbjct: 4931 cggcacgcaccacggcgccctcgg 4908
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>emb|X82489.1|MCPPD M.crystallinum ppd gene
          Length = 12248

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   aaaagttgaagcaggcaaaa 49
            ||||||||||||||||||||
Sbjct: 3844 aaaagttgaagcaggcaaaa 3863
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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   cggcccgcaccacggcgccc 214
             ||||||||||||||||||||
Sbjct: 58490 cggcccgcaccacggcgccc 58509
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>gb|AC159460.9| Mus musculus chromosome 15, clone RP24-306N20, complete sequence
          Length = 184875

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    aggaacactgggaaacattc 334
              ||||||||||||||||||||
Sbjct: 114014 aggaacactgggaaacattc 113995
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>emb|AJ005840.1|TAE5840 Triticum aestivum mRNA for thioredoxin M
          Length = 781

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 cggcccgcaccacggcgccc 214
           ||||||||||||||||||||
Sbjct: 343 cggcccgcaccacggcgccc 324
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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 349    gctctatgcaaagggcctcttgtt 372
              ||||||||||||||||| ||||||
Sbjct: 838665 gctctatgcaaagggccacttgtt 838688
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>ref|XM_678887.1| PREDICTED: Danio rerio similar to collagen, type V, alpha 3
            (LOC556152), mRNA
          Length = 4716

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 265  ccaggcggtgctcgtcttcctggt 288
            ||||||||| ||||||||||||||
Sbjct: 3269 ccaggcggtcctcgtcttcctggt 3246
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>emb|BX510367.7| Zebrafish DNA sequence from clone DKEY-117M4 in linkage group 5,
             complete sequence
          Length = 107878

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   ccaggcggtgctcgtcttcctggt 288
             ||||||||| ||||||||||||||
Sbjct: 32695 ccaggcggtcctcgtcttcctggt 32672
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>gb|AF004848.2| Pseudomonas fluorescens alkaline protease, protease inhibitor,
            zinc-protease transporter (aprD), zinc-protease
            transporter (aprE), and zinc-protease transporter (aprF)
            genes, complete cds
          Length = 7334

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  cggcccgcaccacggcgccctcgg 218
            |||| |||||||||||||||||||
Sbjct: 5466 cggcacgcaccacggcgccctcgg 5443
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    cggcccgcaccacggcgccc 214
              ||||||||||||||||||||
Sbjct: 549117 cggcccgcaccacggcgccc 549098
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>emb|BX825572.1|CNS0A7PA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL45ZE03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 790

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ccacctcatcgccttcttct 185
           ||||||||||||||||||||
Sbjct: 364 ccacctcatcgccttcttct 345
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>gb|AY106373.1| Zea mays PCO147105 mRNA sequence
          Length = 783

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 cggcccgcaccacggcgccc 214
           ||||||||||||||||||||
Sbjct: 339 cggcccgcaccacggcgccc 320
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>emb|AJ870964.1| Triticum turgidum subsp. durum mRNA for thioredoxin M precursor
           (trxm gene)
          Length = 752

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 cggcccgcaccacggcgccc 214
           ||||||||||||||||||||
Sbjct: 330 cggcccgcaccacggcgccc 311
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>emb|CR855328.8| Zebrafish DNA sequence from clone CH211-207D6 in linkage group 2,
              complete sequence
          Length = 152638

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 157    ctacttcctccacctcatcgccttcttctcct 188
              ||||||||||| ||||||| ||||| ||||||
Sbjct: 116726 ctacttcctcctcctcatccccttcctctcct 116757
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 266     caggcggtgctcgtcttcct 285
               ||||||||||||||||||||
Sbjct: 3494248 caggcggtgctcgtcttcct 3494267
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>gb|L40957.1|MZETHIOM Zea mays thioredoxin M mRNA, complete cds
          Length = 712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 195 cggcccgcaccacggcgccc 214
           ||||||||||||||||||||
Sbjct: 311 cggcccgcaccacggcgccc 292
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>emb|AL845283.4| Mouse DNA sequence from clone RP23-151F21 on chromosome 2, complete
             sequence
          Length = 178403

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 345   cattgctctatgcaaagggcctct 368
             ||||||||||||||||||| ||||
Sbjct: 88393 cattgctctatgcaaagggtctct 88416
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>emb|AL627076.14| Mouse DNA sequence from clone RP23-402I22 on chromosome 4, complete
             sequence
          Length = 163353

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   gggatttattgttatatatg 440
             ||||||||||||||||||||
Sbjct: 33767 gggatttattgttatatatg 33786


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,118,032
Number of Sequences: 3902068
Number of extensions: 4118032
Number of successful extensions: 84853
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 84543
Number of HSP's gapped (non-prelim): 311
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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