ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13g08 |
|---|---|
| Clone Library Name | barley_pub |
>NRL4_TOBAC (Q42965) Nitrilase 4 (EC 3.5.5.1)| Length = 349 Score = 115 bits (288), Expect = 7e-26 Identities = 57/92 (61%), Positives = 73/92 (79%) Frame = +2 Query: 236 AAMALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVFYDTPATLDKAEKLIAEAAG 415 A + P + P+ AEV+M G + TVRATVVQAS++FYDTPATL KAE+L+AEAA Sbjct: 2 ALVPTPAVNEGPLFAEVDM--GDNSSTPTVRATVVQASTIFYDTPATLVKAERLLAEAAS 59 Query: 416 YGSQLVLFPEVFVGGYPHGSTFGLTIGSRSAK 511 YG+QLV+FPE F+GGYP GSTFG++IG+R+AK Sbjct: 60 YGAQLVVFPEAFIGGYPRGSTFGVSIGNRTAK 91
>NRL4_ARATH (P46011) Nitrilase 4 (EC 3.5.5.1)| Length = 355 Score = 111 bits (277), Expect = 1e-24 Identities = 56/89 (62%), Positives = 70/89 (78%) Frame = +2 Query: 245 ALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGS 424 A P + + E++M+AG ++ VRATVVQAS+VFYDTPATLDKAE+L++EAA GS Sbjct: 12 AAPQTNGHQIFPEIDMSAG--DSSSIVRATVVQASTVFYDTPATLDKAERLLSEAAENGS 69 Query: 425 QLVLFPEVFVGGYPHGSTFGLTIGSRSAK 511 QLV+FPE F+GGYP GSTF L IGSR+AK Sbjct: 70 QLVVFPEAFIGGYPRGSTFELAIGSRTAK 98
>NRL3_ARATH (P46010) Nitrilase 3 (EC 3.5.5.1)| Length = 346 Score = 87.8 bits (216), Expect = 2e-17 Identities = 40/61 (65%), Positives = 50/61 (81%) Frame = +2 Query: 314 ATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTI 493 ++TVR T+VQ+S+V+ DTPATLDKAEK I EAA G++LVLFPE F+GGYP G FGL + Sbjct: 22 SSTVRVTIVQSSTVYNDTPATLDKAEKFIVEAASKGAKLVLFPEAFIGGYPRGFRFGLAV 81 Query: 494 G 496 G Sbjct: 82 G 82
>NRL1_ARATH (P32961) Nitrilase 1 (EC 3.5.5.1)| Length = 346 Score = 87.4 bits (215), Expect = 2e-17 Identities = 40/61 (65%), Positives = 50/61 (81%) Frame = +2 Query: 314 ATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTI 493 +TTVR T+VQ+S+V+ DTPAT+DKAEK I EAA G++LVLFPE F+GGYP G FGL + Sbjct: 22 STTVRVTIVQSSTVYNDTPATIDKAEKYIVEAASKGAELVLFPEGFIGGYPRGFRFGLAV 81 Query: 494 G 496 G Sbjct: 82 G 82
>NRL2_ARATH (P32962) Nitrilase 2 (EC 3.5.5.1)| Length = 339 Score = 85.9 bits (211), Expect = 6e-17 Identities = 40/61 (65%), Positives = 49/61 (80%) Frame = +2 Query: 314 ATTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTI 493 +T VRAT+VQAS+V+ DTPATL+KA K I EAA GS+LV+FPE F+GGYP G FGL + Sbjct: 15 STIVRATIVQASTVYNDTPATLEKANKFIVEAASKGSELVVFPEAFIGGYPRGFRFGLGV 74 Query: 494 G 496 G Sbjct: 75 G 75
>NRLB_KLEPO (P10045) Nitrilase, bromoxynil-specific (EC 3.5.5.1)| Length = 349 Score = 54.7 bits (130), Expect = 1e-07 Identities = 26/50 (52%), Positives = 34/50 (68%) Frame = +2 Query: 317 TTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYP 466 TT +A VQA V+ D AT DK L+A+AA G+QLV FPE+++ GYP Sbjct: 3 TTFKAAAVQAEPVWMDAAATADKTVTLVAKAAAAGAQLVAFPELWIPGYP 52
>NRL2_RHORH (Q03217) Aliphatic nitrilase (EC 3.5.5.7)| Length = 365 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/50 (50%), Positives = 33/50 (66%) Frame = +2 Query: 320 TVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPH 469 T + VQA V++D T+DK +IAEAA G +LV FPEVF+ GYP+ Sbjct: 6 TFKVAAVQAQPVWFDAAKTVDKTVSIIAEAARNGCELVAFPEVFIPGYPY 55
>NRL_BACSX (P82605) Nitrilase (EC 3.5.5.1)| Length = 338 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/47 (48%), Positives = 31/47 (65%) Frame = +2 Query: 326 RATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYP 466 R VQAS V D AT+DK +L+ EAA G++++ FPE F+ GYP Sbjct: 7 RVAAVQASPVLLDLDATIDKTCRLVDEAAANGAKVIAFPEAFIPGYP 53
>NRL1_RHORH (Q02068) Aliphatic nitrilase (EC 3.5.5.7)| Length = 383 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/54 (44%), Positives = 33/54 (61%) Frame = +2 Query: 323 VRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFG 484 V+ VQA V D AT+DKA I EAA G++ + FPEV++ GYP+ + G Sbjct: 13 VKVATVQAEPVILDADATIDKAIGFIEEAAKNGAEFLAFPEVWIPGYPYWAWIG 66
>NIT1_YEAST (P40447) Putative nitrilase-like protein NIT1| Length = 199 Score = 39.7 bits (91), Expect = 0.005 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = +2 Query: 338 VQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPHGSTFGLTIGSR 502 +Q S T TL K E G++LV+ PE +GGYP GS FG+ +G R Sbjct: 9 LQIGSCPGSTKDTLKKILSYEKEIKESGAKLVVIPEATLGGYPKGSNFGVYLGYR 63
>NRLA_ALCFA (P20960) Nitrilase, arylacetone-specific (EC 3.5.5.1)| (Arylacetonitrilase) Length = 356 Score = 39.7 bits (91), Expect = 0.005 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = +2 Query: 323 VRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYP 466 VRA VQA+S YD +DK +L +A G L++F E ++ GYP Sbjct: 7 VRAAAVQAASPNYDLATGVDKTIELARQARDEGCDLIVFGETWLPGYP 54
>NADE2_THEMA (Q9X0Y0) Probable glutamine-dependent NAD(+) synthetase (EC| 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) Length = 576 Score = 37.0 bits (84), Expect = 0.032 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +2 Query: 323 VRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYP 466 +R T+ Q + D L KA + + A GS L++FPE+F+ GYP Sbjct: 4 LRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYP 51
>CYHY_GLOSO (P32964) Cyanide hydratase (EC 4.2.1.66) (Formamide hydrolyase)| Length = 368 Score = 35.0 bits (79), Expect = 0.12 Identities = 17/48 (35%), Positives = 28/48 (58%) Frame = +2 Query: 326 RATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPH 469 +A VV + V+ + + K + I EA G +L+ FPEV++ GYP+ Sbjct: 7 KAAVVTSEPVWENLEGGVVKTIEFINEAGKAGCKLIAFPEVWIPGYPY 54
>CYHY_GIBBA (P32963) Cyanide hydratase (EC 4.2.1.66) (Formamide hydrolyase)| Length = 357 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +2 Query: 317 TTVRATVVQASSVFYDTPATLDKAEKLIAEAAGYGSQLVLFPEVFVGGYPH 469 T +A V + ++D + K I EA G + V FPEV++ GYP+ Sbjct: 4 TKYKAAAVTSEPGWFDLEGGVRKTIDFINEAGEAGCKFVAFPEVWIPGYPY 54
>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) Length = 324 Score = 32.7 bits (73), Expect = 0.60 Identities = 20/59 (33%), Positives = 22/59 (37%) Frame = +3 Query: 192 HLLS*SARFLALPARRRWLCPPXXXXXXXXXXXXTPAPIRVPPPCGQLLCRPPACSTTP 368 H+L S F LP+ RR PP PPP G LL P A S P Sbjct: 177 HVLRQSISFSGLPSGRRTSPPPASLAGPSVSSWSFSPSSSPPPPPGDLLLSPSAFSAAP 235
>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 613 Score = 32.3 bits (72), Expect = 0.78 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%) Frame = +2 Query: 101 EPQRARTLARDQFVRDYLRRKHDK*HAPPTA--SPLLVRSIPRPSCSAAMALPPASVEP 271 E Q ARTLAR + R+ D+ HA P +P+ VR++P P +AA AS P Sbjct: 328 EMQEARTLARARAHARDQAREQDRAHACPAVEETPMNVRNVPLPGDAAAGHPDRASGHP 386
>CUD1_SCHGR (Q7M4F4) Endocuticle structural glycoprotein SgAbd-1| Length = 184 Score = 32.0 bits (71), Expect = 1.0 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%) Frame = +2 Query: 185 PTASPLLVRSIPRPSCSAAMALPPAS--------VEPVIAEVEMNAGADQGATTVRATVV 340 P +P+ VR IPRPS + PPAS PV+ + A A Q A T+ Sbjct: 9 PKYNPIDVR-IPRPSATPVRPSPPASRAPPPPPPPRPVVPSQPLPAPAPQPAIVPARTIP 67 Query: 341 QASS 352 QASS Sbjct: 68 QASS 71
>PULA_KLEPN (P07206) Pullulanase precursor (EC 3.2.1.41) (Alpha-dextrin| endo-1,6-alpha-glucosidase) (Pullulan 6-glucanohydrolase) Length = 1090 Score = 32.0 bits (71), Expect = 1.0 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Frame = +2 Query: 182 PPTASPLLVRSIPRPSCSAAMALPP-ASVEPVIAEVEMNAGADQGATTVRATVVQASSVF 358 P T S + P S AA LP A+V+ ++ + A + + AT VQ + V Sbjct: 232 PTTVSQQVSMRFPHLSSYAAFKLPDNANVDELLQGETVAIAAAEDGILISATQVQTAGV- 290 Query: 359 YDTPATLDKAEKLIAEAAGYGSQL 430 LD A AEA YG+QL Sbjct: 291 ------LDDAYAEAAEALSYGAQL 308
>RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger protein 1)| Length = 1114 Score = 31.2 bits (69), Expect = 1.7 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 107 QRARTLARDQFVRDYLRRKHDK*HAPPTASPLLVRSIPRPSCSAAMALPPASVEPVIAE 283 Q+ + + Q+ Y R+ +APP LVR+ P P + +PPA+V P +AE Sbjct: 658 QQYQAIVPTQYQPHYDNRRAYPSNAPPYQREELVRASPVP-----LEMPPAAVSPYVAE 711
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.6 bits (65), Expect = 5.0 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2 Query: 185 PTASPLLVRSIPRPSCSAAMA-LPPASVEPVIAEVEMNAGADQGATTVRATVVQASSV 355 P A P+L+R+ P+P A +A P ++PV A V A T+ +V+ S++ Sbjct: 2507 PPAKPVLLRATPKPLAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPELVRYSTL 2564
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 24.6 bits (52), Expect(2) = 5.8 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Frame = -2 Query: 385 FIERCRGV-VEHAGGLHNSC-----PHGGGTLIGAGVHLH 284 +++ CR + A G+H C P GT G G+H H Sbjct: 499 YLKHCRRLWCTSAEGVHKGCRTQHMPLADGTSCGPGMHCH 538 Score = 23.1 bits (48), Expect(2) = 5.8 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -1 Query: 203 GEEMPWGARATCRASCVG 150 GE PWG ++C +C G Sbjct: 554 GEWGPWGPYSSCSRTCGG 571
>PDLI7_RAT (Q9Z1Z9) PDZ and LIM domain protein 7 (LIM mineralization protein)| (LMP) (Protein enigma) Length = 457 Score = 29.3 bits (64), Expect = 6.6 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = +2 Query: 179 APPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVF 358 AP AS + S P P+ + + PP +V+P AE D+ +T + A Sbjct: 198 APAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAE---RYAPDKTSTVLTRHSQPA---- 250 Query: 359 YDTPATLDKAEKLIAEAAGYGS 424 TP L ++ AAG G+ Sbjct: 251 --TPTPLQNRTSIVQAAAGGGT 270
>PDLI7_MOUSE (Q3TJD7) PDZ and LIM domain protein 7 (LIM mineralization protein)| (LMP) (Protein enigma) Length = 457 Score = 29.3 bits (64), Expect = 6.6 Identities = 23/82 (28%), Positives = 35/82 (42%) Frame = +2 Query: 179 APPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEVEMNAGADQGATTVRATVVQASSVF 358 AP AS + S P P+ + + PP +V+P AE D+ +T + A Sbjct: 198 APAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAE---RYAPDKTSTVLTRHSQPA---- 250 Query: 359 YDTPATLDKAEKLIAEAAGYGS 424 TP L ++ AAG G+ Sbjct: 251 --TPTPLQNRTSIVQAAAGGGT 270
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 29.3 bits (64), Expect = 6.6 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 179 APPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEV 286 +PP S V +PRP A LPP PV A+V Sbjct: 3310 SPPPVSVATVEVVPRPKVETAQPLPP---RPVAAQV 3342
>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)| (TIS11A protein) (TIS11) Length = 320 Score = 29.3 bits (64), Expect = 6.6 Identities = 20/59 (33%), Positives = 24/59 (40%) Frame = +3 Query: 192 HLLS*SARFLALPARRRWLCPPXXXXXXXXXXXXTPAPIRVPPPCGQLLCRPPACSTTP 368 H+L S F LP+ RR PP + +P PPP G L P A S P Sbjct: 172 HVLRQSISFSGLPSGRR-TSPPPPGFSGPSLSSCSFSPSSSPPPPGDLPLSPSAFSAAP 229
>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) Length = 325 Score = 29.3 bits (64), Expect = 6.6 Identities = 19/59 (32%), Positives = 21/59 (35%) Frame = +3 Query: 192 HLLS*SARFLALPARRRWLCPPXXXXXXXXXXXXTPAPIRVPPPCGQLLCRPPACSTTP 368 H+L S F LP+ RR PP PPP G L P A S P Sbjct: 177 HVLRQSISFSGLPSGRRTSPPPASLAGPSVPSWSFSPSSSPPPPPGDLPLSPSAFSAAP 235
>TAL_ANAVT (P51778) Transaldolase (EC 2.2.1.2)| Length = 332 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 359 YDTPATLDKAEKLIAE--AAGYGSQLVL 436 YDT AT+ KA +LIA+ AAG G + VL Sbjct: 107 YDTEATITKARELIAQYKAAGIGPERVL 134
>TAL_ANASP (P58561) Transaldolase (EC 2.2.1.2)| Length = 332 Score = 29.3 bits (64), Expect = 6.6 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 359 YDTPATLDKAEKLIAE--AAGYGSQLVL 436 YDT AT+ KA +LIA+ AAG G + VL Sbjct: 107 YDTEATITKARELIAQYKAAGIGPERVL 134
>K501_ACTCH (P43393) Fruit protein PKIWI501| Length = 184 Score = 28.9 bits (63), Expect = 8.6 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 8/71 (11%) Frame = +2 Query: 224 PSCSAAMALPPASVEPVIAEVE------MNAGADQGATTVR--ATVVQASSVFYDTPATL 379 P AA+A PPA EPV E E + A + AT + A V +A + P Sbjct: 28 PQPEAAVAAPPAPAEPVTEEPEKAAPEAVEAPEEPAATDAKDPAEVAEAEEEVVEEPQ-- 85 Query: 380 DKAEKLIAEAA 412 + E+ +AEAA Sbjct: 86 EVPEEPVAEAA 96
>ADDA_HUMAN (P35611) Alpha-adducin (Erythrocyte adducin alpha subunit)| Length = 737 Score = 28.9 bits (63), Expect = 8.6 Identities = 20/78 (25%), Positives = 33/78 (42%) Frame = +2 Query: 161 KHDK*HAPPTASPLLVRSIPRPSCSAAMALPPASVEPVIAEVEMNAGADQGATTVRATVV 340 K ++ H PP+ + + P P+ A P + E + VE A AD G+ Sbjct: 660 KEEEAHRPPSPTEAPTEASPEPAPDPA----PVAEEAAPSAVEEGAAADPGSDGSPGKSP 715 Query: 341 QASSVFYDTPATLDKAEK 394 + TP+ L K++K Sbjct: 716 SKKKKKFRTPSFLKKSKK 733
>ZN131_PONPY (Q5RAU9) Zinc finger protein 131| Length = 589 Score = 28.9 bits (63), Expect = 8.6 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 6/72 (8%) Frame = +2 Query: 209 RSIPRPSCSAAMALPPASVEPVIAEVEMNAGA----DQGATTVRATVVQASSVFY--DTP 370 R I S +LP A EPV EVE+ G D+G T+ SV Y T Sbjct: 145 RKIAETSNVITESLPSAESEPVEIEVEIAEGTIEVEDEGVETLEEVASAKQSVKYIQSTG 204 Query: 371 ATLDKAEKLIAE 406 ++ D A L+A+ Sbjct: 205 SSDDSALALLAD 216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,163,275 Number of Sequences: 219361 Number of extensions: 1414133 Number of successful extensions: 5670 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5248 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5662 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
