Clone Name | bart13f12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC159240.3| Mus musculus BAC clone RP24-555M20 from chromosome 5, complete sequence Length = 197104 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcc 37 ||||||||||||||||||||||| Sbjct: 11266 ctccaccaccaccacccccatcc 11244
>gb|AC114752.5| Homo sapiens BAC clone RP11-264N12 from 2, complete sequence Length = 89208 Score = 46.1 bits (23), Expect = 0.004 Identities = 26/27 (96%) Strand = Plus / Plus Query: 10 tcacactccaccaccaccacccccatc 36 ||||||||||||||||||||| ||||| Sbjct: 65156 tcacactccaccaccaccaccaccatc 65182
>gb|AC145559.4| Mus musculus BAC clone RP23-371A1 from 5, complete sequence Length = 203726 Score = 46.1 bits (23), Expect = 0.004 Identities = 23/23 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 ||||||||||||||||||||||| Sbjct: 95866 ctccaccaccaccacccccatcc 95888
>gb|AC102487.6| Mus musculus chromosome 5, clone RP24-496C22, complete sequence Length = 167936 Score = 44.1 bits (22), Expect = 0.016 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 actccaccaccaccacccccat 35 |||||||||||||||||||||| Sbjct: 166672 actccaccaccaccacccccat 166693
>gb|AC129607.3| Mus musculus BAC clone RP23-133N3 from 5, complete sequence Length = 186120 Score = 44.1 bits (22), Expect = 0.016 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccccat 35 |||||||||||||||||||||| Sbjct: 162316 actccaccaccaccacccccat 162295
>emb|AL023754.1|HS272L16 Human DNA sequence from clone RP1-272L16 on chromosome 1q32.1-32.3 Contains a novel gene, the CAMK1G gene for calcium/calmodulin-dependent protein kinase IG and the 3' end of the LAMB3 gene for laminin beta 3, complete sequence Length = 157875 Score = 44.1 bits (22), Expect = 0.016 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatcca 38 |||||||||||||||||||||| Sbjct: 119000 ccaccaccaccacccccatcca 119021
>ref|NM_188299.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1806 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cactccaccaccaccaccccc 33 ||||||||||||||||||||| Sbjct: 879 cactccaccaccaccaccccc 899
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatcc 37 ||||||||||||||||||||| Sbjct: 41322 ccaccaccaccacccccatcc 41342
>gb|AC117222.3| Mus musculus BAC clone RP23-347H12 from chromosome 16, complete sequence Length = 200746 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacccc 32 ||||||||||||||||||||| Sbjct: 105293 acactccaccaccaccacccc 105313
>gb|AC113316.14| Mus musculus chromosome 5, clone RP23-441I24, complete sequence Length = 247892 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cactccaccaccaccaccccc 33 ||||||||||||||||||||| Sbjct: 8482 cactccaccaccaccaccccc 8462
>ref|XM_722270.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00082) partial mRNA Length = 1716 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tccaccaccaccacccccatc 36 ||||||||||||||||||||| Sbjct: 531 tccaccaccaccacccccatc 551
>gb|AC011676.10| Homo sapiens chromosome , clone RP11-10J21, complete sequence Length = 197630 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatcc 37 ||||||||||||||||||||| Sbjct: 166552 ccaccaccaccacccccatcc 166572
>emb|AL663033.10| Mouse DNA sequence from clone RP23-78H18 on chromosome 11 Contains the 5' end of a novel gene (2410004F01Rik), a novel gene, part of a novel gene (9630013K17Rik), a novel gene and a CpG island, complete sequence Length = 126191 Score = 42.1 bits (21), Expect = 0.065 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 tcactcatcacactccaccaccacc 27 ||||||||||||| ||||||||||| Sbjct: 8907 tcactcatcacaccccaccaccacc 8883
>gb|AC115019.28| Mus musculus chromosome 5, clone RP24-224J7, complete sequence Length = 175448 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cactccaccaccaccaccccc 33 ||||||||||||||||||||| Sbjct: 59404 cactccaccaccaccaccccc 59424
>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete sequence Length = 199707 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatcc 37 ||||||||||||||||||||| Sbjct: 57479 ccaccaccaccacccccatcc 57459
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatcc 37 ||||||||||||||||||||| Sbjct: 27810905 ccaccaccaccacccccatcc 27810925 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 28500426 ccaccaccaccacccccatc 28500445 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 28364313 ccaccaccaccacccccat 28364331 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccc 32 ||||||||||||||||||| Sbjct: 23483424 actccaccaccaccacccc 23483406 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 20011608 ccaccaccaccacccccat 20011626 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cactccaccaccaccacc 30 |||||||||||||||||| Sbjct: 27440568 cactccaccaccaccacc 27440585 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 26698212 ccaccaccaccaccccca 26698195 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 12672110 ccaccaccaccaccccca 12672093
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cactccaccaccaccaccccc 33 ||||||||||||||||||||| Sbjct: 5550004 cactccaccaccaccaccccc 5549984 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 actccaccaccaccaccc 31 |||||||||||||||||| Sbjct: 36018142 actccaccaccaccaccc 36018159 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 cactccaccaccaccacc 30 |||||||||||||||||| Sbjct: 23069799 cactccaccaccaccacc 23069782 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 8361086 ccaccaccaccaccccca 8361103 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 3355536 ccaccaccaccaccccca 3355553
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cactccaccaccaccaccccc 33 ||||||||||||||||||||| Sbjct: 146844 cactccaccaccaccaccccc 146824
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cactccaccaccaccaccccc 33 ||||||||||||||||||||| Sbjct: 15477 cactccaccaccaccaccccc 15457
>ref|XM_321235.2| Anopheles gambiae str. PEST ENSANGP00000008413 (ENSANGG00000006335), partial mRNA Length = 5847 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccat 35 ||||||||||||||||||||| Sbjct: 595 ctccaccaccaccacccccat 575
>dbj|AP000870.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-697H10, complete sequence Length = 179339 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tccaccaccaccacccccatc 36 ||||||||||||||||||||| Sbjct: 177056 tccaccaccaccacccccatc 177036
>dbj|AP000779.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-822I2, complete sequence Length = 196606 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tccaccaccaccacccccatc 36 ||||||||||||||||||||| Sbjct: 5665 tccaccaccaccacccccatc 5645
>emb|AL669905.14| Mouse DNA sequence from clone RP23-110H24 on chromosome 4, complete sequence Length = 138217 Score = 42.1 bits (21), Expect = 0.065 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatcc 37 ||||||||||||||||||||| Sbjct: 5095 ccaccaccaccacccccatcc 5075
>gb|AC114650.10| Mus musculus chromosome 3, clone RP24-151O6, complete sequence Length = 185956 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 72979 ctccaccaccaccaccccca 72960
>gb|AC158551.5| Mus musculus chromosome 8, clone RP23-466C10, complete sequence Length = 177561 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tcacactccaccaccaccac 29 |||||||||||||||||||| Sbjct: 136303 tcacactccaccaccaccac 136322
>ref|XM_520657.1| PREDICTED: Pan troglodytes similar to B-cell CLL/lymphoma 7A; B-cell CLL/lymphoma-7 (LOC465189), mRNA Length = 3441 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 1892 ccaccaccaccacccccatc 1911
>gb|AC168055.3| Mus musculus BAC clone RP24-360I1 from chromosome 10, complete sequence Length = 206775 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 145592 cacactccaccaccaccacc 145573
>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence Length = 190857 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 43963 ccaccaccaccacccccatc 43982
>ref|NM_001024808.1| Homo sapiens B-cell CLL/lymphoma 7A (BCL7A), transcript variant 2, mRNA Length = 3651 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 1602 ccaccaccaccacccccatc 1621
>ref|NM_020993.3| Homo sapiens B-cell CLL/lymphoma 7A (BCL7A), transcript variant 1, mRNA Length = 3714 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 1665 ccaccaccaccacccccatc 1684
>gb|AC109257.8| Mus musculus chromosome 7, clone RP23-362F15, complete sequence Length = 158694 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cacactccaccaccaccaccccca 34 ||||| |||||||||||||||||| Sbjct: 89210 cacacaccaccaccaccaccccca 89187
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 102139 caccaccaccacccccatcc 102158
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 113612 ctccaccaccaccaccccca 113631 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 55104 ccaccaccaccaccccca 55121
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 131259 ccaccaccaccacccccatc 131240
>gb|AC132919.9| Mus musculus chromosome 12, clone RP24-356H3, complete sequence Length = 163965 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 153278 ctccaccaccaccaccccca 153297
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 28119 ccaccaccaccacccccatc 28138
>gb|BC034916.1| Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 12, mRNA (cDNA clone IMAGE:5278613), with apparent retained intron Length = 2284 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 1764 caccaccaccacccccatcc 1783
>gb|AC145420.4| Homo sapiens 12 BAC RP11-267J8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 8588 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 4327 ccaccaccaccacccccatc 4308
>gb|AC158527.2| Mus musculus BAC clone RP23-266E16 from chromosome 12, complete sequence Length = 218736 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cacactccaccaccaccaccccca 34 ||||| |||||||||||||||||| Sbjct: 67296 cacaccccaccaccaccaccccca 67273
>gb|AC069279.6| Homo sapiens BAC clone CTD-2031I8 from 7, complete sequence Length = 103898 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 8534 ccaccaccaccacccccatc 8515
>gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome 18, complete sequence Length = 246348 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 174023 ccaccaccaccacccccatc 174042
>emb|X89984.1|HSBCL7A H.sapiens mRNA for BCL7A protein Length = 4522 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 2478 ccaccaccaccacccccatc 2497
>gb|AC115293.5| Mus musculus BAC clone RP23-92N2 from chromosome 5, complete sequence Length = 239951 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 184429 ctccaccaccaccaccccca 184448
>gb|AC092327.4| Homo sapiens chromosome 16 clone RP11-158I3, complete sequence Length = 189756 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 167603 ccaccaccaccacccccatc 167584
>gb|AC124765.2| Mus musculus BAC clone RP23-197D9 from 2, complete sequence Length = 191781 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 177993 ccaccaccaccacccccatc 177974
>gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, complete sequence Length = 214461 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tccaccaccaccacccccat 35 |||||||||||||||||||| Sbjct: 14748 tccaccaccaccacccccat 14729
>gb|AC004928.2| Homo sapiens PAC clone RP5-914M6 from 7, complete sequence Length = 137137 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 80263 ccaccaccaccacccccatc 80282 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 80161 ccaccaccaccacccccatc 80180 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 80413 ccaccaccaccaccccca 80430
>emb|CR631131.1| Human DNA sequence from clone XXyac-82D3 on chromosome 6, complete sequence Length = 2996 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacccccatcca 38 ||||||| |||||||||||| ||||||| Sbjct: 2952 cacactctaccaccaccacctccatcca 2925 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacccccatcca 38 ||||||| |||||||||||| ||||||| Sbjct: 2851 cacactctaccaccaccacctccatcca 2824 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacccccatcca 38 ||||||| |||||||||||| ||||||| Sbjct: 2825 cacactctaccaccaccacctccatcca 2798 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacccccatcca 38 ||||||| |||||||||||| ||||||| Sbjct: 2678 cacactctaccaccaccaccaccatcca 2651 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacccccatcca 38 ||||||| |||||||||||| ||||||| Sbjct: 2652 cacactctaccaccaccaccaccatcca 2625 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 2626 cacactccaccaccaccacc 2607 Score = 40.1 bits (20), Expect = 0.25 Identities = 26/28 (92%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacccccatcca 38 ||||||| |||||||||||| ||||||| Sbjct: 2577 cacactctaccaccaccacctccatcca 2550 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatcca 38 |||||||||||||| ||||||| Sbjct: 2972 ccaccaccaccaccaccatcca 2951 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 2718 ccaccaccaccaccccca 2701 Score = 36.2 bits (18), Expect = 4.0 Identities = 24/26 (92%) Strand = Plus / Minus Query: 13 cactccaccaccaccacccccatcca 38 ||||| |||||||||||| ||||||| Sbjct: 2702 cactctaccaccaccaccaccatcca 2677
>emb|AL589787.16| Human DNA sequence from clone RP11-422P15 on chromosome 10 Contans the 5' end of the ADAM12 gene for a disintegrin and metalloproteinase domain 12 (meltrin alpha) (MCMP, MLTN, MLTNA, MCMPMltna), a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 146287 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 17020 cacactccaccaccaccacc 17039
>emb|AL390755.5| Human DNA sequence from clone RP11-472K17 on chromosome 13 Contains a novel gene, the 3' end of the COL4A1 gene for collagen type IV alpha 1 and a CpG island, complete sequence Length = 186120 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 50244 ctccaccaccaccaccccca 50263
>emb|AL353789.18| Human DNA sequence from clone RP11-570F6 on chromosome 13 Contains the 5' end of the WASF3 gene for WAS protein family, member 3 (WASP family Verprolin-homologous protein 3(SCAR3, Scar3, WAVE3, KIAA0900)), a ribosomal protein S3A (RPS3A)(FTE1) pseudogene and a CpG island, complete sequence Length = 166787 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 19033 ccaccaccaccacccccatc 19014
>emb|AL117381.32|HSJ857M17 Human DNA sequence from clone RP5-857M17 on chromosome 20 Contains the 3' end of the ID1 gene for inhibitor of DNA binding 1 (dominant negative helix-loop-helix protein), the COX4I2 gene for cytochrome c oxidase subunit IV variant 2, the 5' end of a novel gene, the 3' end of the BCL2L1 gene for BCL2-like 1 and two CpG islands, complete sequence Length = 99593 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 tcacactccaccaccaccaccccc 33 |||||||||||| ||||||||||| Sbjct: 88829 tcacactccacctccaccaccccc 88806
>emb|AL109933.25|HSDJ81D8 Human DNA sequence from clone RP1-81D8 on chromosome 6q25.3-26 Contains the PLG gene for plasminogen, the 5' end of the LPA gene for lipoprotein (Lp(a)), a novel gene, a pseudogene similar to part of plasminogen and a CpG island, complete sequence Length = 163599 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 99457 ccaccaccaccacccccatc 99476
>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence Length = 158066 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 45627 cacactccaccaccaccacc 45608
>gb|BC094723.1| Homo sapiens B-cell CLL/lymphoma 7A, transcript variant 2, mRNA (cDNA clone MGC:104545 IMAGE:5300018), complete cds Length = 2394 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 1482 ccaccaccaccacccccatc 1501
>emb|AL832171.1|HSM803478 Homo sapiens mRNA; cDNA DKFZp686F1316 (from clone DKFZp686F1316) Length = 2879 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 2358 caccaccaccacccccatcc 2377
>gb|AC136964.2| Sus scrofa domestica clone RP44-154L9, complete sequence Length = 164640 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 65440 caccaccaccacccccatcc 65421
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence Length = 185644 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 actccaccaccaccaccccc 33 |||||||||||||||||||| Sbjct: 122262 actccaccaccaccaccccc 122281 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatc 36 |||||||||||||||| ||||| Sbjct: 123011 ctccaccaccaccacctccatc 123032 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatc 36 |||||||||||||||| ||||| Sbjct: 122573 ctccaccaccaccacctccatc 122594 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatc 36 |||||||||||||||| ||||| Sbjct: 122480 ctccaccaccaccacctccatc 122501
>emb|AL773511.5| Mouse DNA sequence from clone RP24-66J23 on chromosome 4, complete sequence Length = 130914 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcca 38 |||||||||||||||| ||||||| Sbjct: 104308 ctccaccaccaccaccaccatcca 104285
>gb|AC163642.3| Mus musculus BAC clone RP24-456N17 from chromosome 5, complete sequence Length = 204856 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 97532 ctccaccaccaccaccccca 97513
>gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, complete sequence Length = 213246 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 18412 cacactccaccaccaccacc 18431
>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence Length = 166581 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 162426 ctccaccaccaccaccccca 162407
>dbj|AK091995.1| Homo sapiens cDNA FLJ34676 fis, clone LIVER2002644, highly similar to CYTOCHROME P450 4F3 (EC 1.14.13.30) Length = 2412 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 1903 caccaccaccacccccatcc 1922
>dbj|AK075435.1| Homo sapiens cDNA PSEC0126 fis, clone PLACE1003549, highly similar to Homo sapiens mRNA for leukotriene B4 omega-hydroxylase Length = 1906 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 1397 caccaccaccacccccatcc 1416
>gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gene sequence Length = 138754 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 114798 ctccaccaccaccaccccca 114817
>gb|AF390547.1| Mus musculus cystin cilia-associated protein gene, complete cds Length = 110391 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 7927 ctccaccaccaccaccccca 7946
>gb|AC022874.8| Homo sapiens chromosome 8, clone RP11-396J6, complete sequence Length = 177513 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 51252 ccaccaccaccacccccatc 51233
>gb|AC156984.9| Mus musculus chromosome 5, clone RP23-418H8, complete sequence Length = 171080 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 99873 ctccaccaccaccaccccca 99892
>gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map 15q21.3, complete sequence Length = 199289 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 146294 ccaccaccaccacccccatc 146275
>gb|AC159809.2| Mus musculus BAC clone RP24-216P6 from chromosome 9, complete sequence Length = 160712 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 111709 cacactccaccaccaccacc 111728
>gb|AC026222.5| Homo sapiens chromosome 12 clone RP11-543D1, complete sequence Length = 168085 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 92821 cacactccaccaccaccacc 92840
>gb|AC153762.3| Loxodonta africana clone VMRC15-159I7, complete sequence Length = 140444 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 accaccaccacccccatcca 38 |||||||||||||||||||| Sbjct: 97514 accaccaccacccccatcca 97533
>gb|AC148667.1| Macaca mulatta Major Histocompatibility Complex BAC MMU025A04, complete sequence Length = 218267 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 123970 ccaccaccaccacccccatc 123989
>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence Length = 197236 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 188717 ccaccaccaccacccccatc 188698
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 tcacactccaccaccaccaccccc 33 |||||| ||||||||||||||||| Sbjct: 18585862 tcacacaccaccaccaccaccccc 18585839 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccc 32 |||||||||||||||||| Sbjct: 25177059 ctccaccaccaccacccc 25177042 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 22204906 ccaccaccaccaccccca 22204889
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 2310061 ccaccaccaccacccccatc 2310042
>gb|AC156459.2| Mus musculus BAC clone RP23-269A9 from chromosome 13, complete sequence Length = 188142 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 116638 caccaccaccacccccatcc 116619
>gb|AC140262.4| Mus musculus BAC clone RP23-459B6 from chromosome 12, complete sequence Length = 179484 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 32234 ctccaccaccaccaccccca 32253
>gb|AC018366.39| Mus musculus strain 129/SvJ chromosome 5 clone mgs1-458e5, complete sequence Length = 126143 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 61582 ctccaccaccaccaccccca 61563
>gb|BC089740.1| Xenopus tropicalis hypothetical LOC548379, mRNA (cDNA clone IMAGE:7024125), partial cds Length = 2616 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 525 ctccaccaccaccaccccca 544
>gb|AC114815.5| Homo sapiens BAC clone RP11-1369K4 from 4, complete sequence Length = 125402 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 101940 ccaccaccaccacccccatc 101921 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 102459 ccaccaccaccaccccca 102442
>gb|AC099706.8| Mus musculus, clone RP23-267P24, complete sequence Length = 168307 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cacactccaccaccaccaccccca 34 ||||| |||||||||||||||||| Sbjct: 116910 cacacaccaccaccaccaccccca 116887
>gb|AY192161.1| Homo sapiens plasminogen (PLG) gene, complete cds Length = 55266 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 49727 ccaccaccaccacccccatc 49746
>dbj|AP004006.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1197_D06 Length = 103844 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 tcacactccaccaccaccaccccc 33 |||||| ||||||||||||||||| Sbjct: 10916 tcacacaccaccaccaccaccccc 10893
>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0005E02 Length = 89380 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 tcacactccaccaccaccaccccc 33 |||||| ||||||||||||||||| Sbjct: 38404 tcacacaccaccaccaccaccccc 38381
>emb|AL671907.6| Mouse DNA sequence from clone RP23-245F8 on chromosome X, complete sequence Length = 144116 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 2848 cacactccaccaccaccacc 2867
>gb|AC018365.49| Mus musculus strain 129/SvJ clone mgs1-461b11 map 5, complete sequence Length = 117052 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 20794 ctccaccaccaccaccccca 20813
>dbj|AK074412.1| Homo sapiens cDNA FLJ23832 fis, clone KAIA02827, highly similar to CYTOCHROME P450 4F3 (EC 1.14.13.30) Length = 3273 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 2753 caccaccaccacccccatcc 2772
>dbj|AK073568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042J01, full insert sequence Length = 1185 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 actccaccaccaccaccccc 33 |||||||||||||||||||| Sbjct: 2 actccaccaccaccaccccc 21
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tccaccaccaccacccccat 35 |||||||||||||||||||| Sbjct: 80440 tccaccaccaccacccccat 80459
>emb|AL929068.20| Mouse DNA sequence from clone RP23-9N11 on chromosome 2, complete sequence Length = 131152 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcca 38 |||||||||||||||| ||||||| Sbjct: 63532 ctccaccaccaccaccaccatcca 63509
>gb|AF055914.1|AF055914 Crithidia fasciculata tryparedoxin peroxidase (TryP) gene, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 461 cacactccaccaccaccacc 480
>gb|AF023256.1|MMFATP1 Mus musculus fatty acid transport protein (FATP) gene, exons 1-3 Length = 2403 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 38 caccaccaccacccccatcc 57
>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete sequence Length = 219568 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 125018 ccaccaccaccacccccatc 125037
>gb|AC003670.1|AC003670 Homo sapiens 12q13.1 PAC RPCI1-130F5 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 88945 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 87780 cacactccaccaccaccacc 87799
>gb|AC156455.1| Homo sapiens chromosome 12 clone fa0722, complete sequence Length = 38686 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 23737 ccaccaccaccacccccatc 23718
>gb|AC004523.1|AC004523 Homo sapiens chromosome 19, cosmid F22329, complete sequence Length = 41533 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 21440 caccaccaccacccccatcc 21459
>gb|AC125067.4| Mus musculus BAC clone RP23-431C5 from 12, complete sequence Length = 192938 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 151756 ctccaccaccaccaccccca 151775
>gb|AC124756.4| Mus musculus BAC clone RP23-115J2 from 6, complete sequence Length = 213833 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cacactccaccaccaccaccccca 34 ||||| |||||||||||||||||| Sbjct: 162065 cacacaccaccaccaccaccccca 162088
>emb|CT033847.5| Mouse DNA sequence from clone RP24-225N8 on chromosome 17, complete sequence Length = 171164 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 75472 ccaccaccaccacccccatc 75453 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 75622 ccaccaccaccaccccca 75605 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 75562 ccaccaccaccaccccca 75545 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 75529 ccaccaccaccaccccca 75512 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 75430 ccaccaccaccaccccca 75413
>gb|AC079445.28| Mus musculus strain C57BL/6J chromosome 5 clone rp23-403l21, complete sequence Length = 189517 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 179613 ctccaccaccaccaccccca 179632
>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200, complete sequence Length = 91393 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 75294 cacactccaccaccaccacc 75313
>gb|AC162033.11| Mus musculus chromosome 8, clone RP23-162M13, complete sequence Length = 217343 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatcc 37 |||||||||||||||||||| Sbjct: 24249 caccaccaccacccccatcc 24268
>emb|AL669845.9| Mouse DNA sequence from clone RP23-43C21 on chromosome 11, complete sequence Length = 243954 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccacc 30 |||||||||||||||||||| Sbjct: 204449 cacactccaccaccaccacc 204468 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 54613 ccaccaccaccaccccca 54596
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccatc 36 |||||||||||||||||||| Sbjct: 155651 ccaccaccaccacccccatc 155632
>gb|AC166749.6| Mus musculus chromosome 1, clone RP23-463A15, complete sequence Length = 186262 Score = 40.1 bits (20), Expect = 0.25 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cacactccaccaccaccaccccca 34 ||||| |||||||||||||||||| Sbjct: 169139 cacacaccaccaccaccaccccca 169116
>emb|AJ421481.1| Bos taurus X-inactivation center region, Jpx and Xist genes Length = 233345 Score = 40.1 bits (20), Expect = 0.25 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccca 34 |||||||||||||||||||| Sbjct: 71896 ctccaccaccaccaccccca 71915
>gb|AC154034.1| Medicago truncatula chromosome 7 BAC clone mth2-71n23, complete sequence Length = 125195 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||| |||||| Sbjct: 59288 ctccaccaccaccaccaccatcc 59266
>ref|NM_123338.2| Arabidopsis thaliana transcription factor AT5G39760 mRNA, complete cds Length = 1415 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 249 tcatcaaacgccaccaccaccaccaccatcc 279
>gb|BC103786.1| Mus musculus cadherin 7, type 2, mRNA (cDNA clone IMAGE:30252481), complete cds Length = 3099 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 cacactccaccaccaccaccccc 33 ||||| ||||||||||||||||| Sbjct: 2855 cacacaccaccaccaccaccccc 2833
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 tccaccaccaccaccccca 34 ||||||||||||||||||| Sbjct: 186296 tccaccaccaccaccccca 186314
>gb|AC165224.9| Mus musculus chromosome 5, clone RP24-389L10, complete sequence Length = 155046 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 134163 ctccaccaccaccaccccc 134145
>ref|XM_636489.1| Dictyostelium discoideum hypothetical protein (DDB0214996), partial mRNA Length = 3657 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 tccaccaccaccaccccca 34 ||||||||||||||||||| Sbjct: 2031 tccaccaccaccaccccca 2049
>ref|XM_628935.1| Dictyostelium discoideum Wiscott-Aldrich syndrome protein (DDB0229895), partial mRNA Length = 1200 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||| |||||| Sbjct: 818 ctccaccaccaccaccaccatcc 840
>gb|AC132583.3| Mus musculus BAC clone RP24-339P17 from chromosome 3, complete sequence Length = 153573 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 60486 ccaccaccaccacccccat 60468
>gb|AC166750.8| Mus musculus chromosome 8, clone RP23-9K18, complete sequence Length = 149261 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||||| |||| Sbjct: 135474 ctccaccaccaccaccccaatcc 135496
>ref|XM_526573.1| PREDICTED: Pan troglodytes anthrax toxin receptor 2 (LOC471191), mRNA Length = 1671 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 1256 ctccaccaccaccaccccc 1274
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 cacactccaccaccaccac 29 ||||||||||||||||||| Sbjct: 284703 cacactccaccaccaccac 284685 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 cactccaccaccaccacc 30 |||||||||||||||||| Sbjct: 228432 cactccaccaccaccacc 228449
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 148555 ccaccaccaccacccccat 148573
>gb|AC010993.13| Drosophila melanogaster clone BACR27O05, complete sequence Length = 193526 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 178078 ccaccaccaccacccccat 178060
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 9933 ccaccaccaccacccccat 9951
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 152770 ccaccaccaccacccccat 152788
>gb|AC009537.6| Drosophila melanogaster clone BACR11M01, complete sequence Length = 160712 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 59420 caccaccaccacccccatc 59438
>ref|XM_424164.1| PREDICTED: Gallus gallus similar to KIAA1941 protein (LOC426525), partial mRNA Length = 886 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 474 ccaccaccaccacccccat 456
>ref|XM_415194.1| PREDICTED: Gallus gallus similar to hypothetical Ypt/Rab-GAP domain of gyp1p structure containing protein (LOC416903), mRNA Length = 4055 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 3643 ccaccaccaccacccccat 3625
>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence Length = 174995 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||||| |||| Sbjct: 163171 ctccaccaccaccaccccaatcc 163149 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||||| |||| Sbjct: 25720 ctccaccaccaccaccccaatcc 25698
>gb|AC185132.1| Mus musculus BAC clone RP24-109C1 from chromosome y, complete sequence Length = 169136 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 36890 ccaccaccaccacccccat 36872
>gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete sequence Length = 196157 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 10718 ccaccaccaccacccccat 10700
>gb|AC150284.1| Latimeria menadoensis clone VMRC4-44H8, complete sequence Length = 187607 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 165412 ccaccaccaccacccccat 165394
>gb|AC141874.4| Mus musculus BAC clone RP24-327L10 from chromosome Y, complete sequence Length = 188351 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 152015 ccaccaccaccacccccat 151997 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 87244 ccaccaccaccacccccat 87226 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 24781 ccaccaccaccacccccat 24763
>gb|AC145586.4| Mus musculus BAC clone RP24-167J1 from chromosome Y, complete sequence Length = 158469 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 58059 ccaccaccaccacccccat 58041
>ref|XM_879927.1| PREDICTED: Bos taurus similar to zinc finger protein 512, transcript variant 3 (LOC533884), mRNA Length = 2173 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||| |||||||||||| Sbjct: 1922 ctccaccacccccacccccatcc 1944
>ref|XM_613439.2| PREDICTED: Bos taurus similar to zinc finger protein 512, transcript variant 1 (LOC533884), mRNA Length = 2134 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||| |||||||||||| Sbjct: 1883 ctccaccacccccacccccatcc 1905
>ref|XM_867249.1| PREDICTED: Bos taurus similar to zinc finger protein 512, transcript variant 2 (LOC533884), mRNA Length = 2292 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||| |||||||||||| Sbjct: 2041 ctccaccacccccacccccatcc 2063
>gb|AC183375.2| Mus musculus BAC clone RP24-306E24 from chromosome y, complete sequence Length = 122139 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 43242 ccaccaccaccacccccat 43260
>ref|NM_005491.1| Homo sapiens chromosome X open reading frame 6 (CXorf6), mRNA Length = 4599 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 1124 ccaccaccaccacccccat 1142
>gb|AC134531.3| Mus musculus BAC clone RP24-528F18 from chromosome Y, complete sequence Length = 130027 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 73283 ccaccaccaccacccccat 73301
>gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosome Y, complete sequence Length = 223801 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 39295 ccaccaccaccacccccat 39313
>gb|AC129209.4| Mus musculus BAC clone RP24-318B5 from chromosome Y, complete sequence Length = 177935 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 52790 ccaccaccaccacccccat 52808
>gb|AC145346.3| Mus musculus BAC clone RP24-76G8 from chromosome Y, complete sequence Length = 207267 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 159638 ccaccaccaccacccccat 159656 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 94302 ccaccaccaccacccccat 94320
>gb|AC139943.3| Mus musculus BAC clone RP23-472M3 from chromosome 7, complete sequence Length = 183421 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 tccaccaccaccaccccca 34 ||||||||||||||||||| Sbjct: 167873 tccaccaccaccaccccca 167891
>gb|AC147111.2| Mus musculus BAC clone RP24-111K19 from chromosome Y, complete sequence Length = 181226 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 30932 ccaccaccaccacccccat 30950
>gb|AC140401.4| Mus musculus BAC clone RP24-89O8 from chromosome Y, complete sequence Length = 244637 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 82986 ccaccaccaccacccccat 82968
>gb|AC133946.3| Mus musculus BAC clone RP24-188D7 from chromosome 17, complete sequence Length = 170090 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 28537 ctccaccaccaccaccccc 28555
>gb|AC145742.3| Mus musculus BAC clone RP24-225F21 from chromosome Y, complete sequence Length = 183572 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 82860 ccaccaccaccacccccat 82878
>gb|AC148325.2| Mus musculus BAC clone RP24-407P18 from chromosome Y, complete sequence Length = 133083 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 58099 ccaccaccaccacccccat 58117
>gb|DQ280335.1| Rabies virus DA24 nucleoprotein gene, partial cds Length = 707 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 actcactcatcacactcca 19 ||||||||||||||||||| Sbjct: 445 actcactcatcacactcca 463
>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence Length = 211576 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccc 32 ||||||||||||||||||| Sbjct: 157243 actccaccaccaccacccc 157225
>gb|AC162936.3| Mus musculus BAC clone RP23-108K5 from chromosome 14, complete sequence Length = 236917 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 acactccaccaccaccaccccca 34 |||| |||||||||||||||||| Sbjct: 3085 acacaccaccaccaccaccccca 3107
>gb|AC161368.2| Mus musculus BAC clone RP23-460M18 from chromosome 6, complete sequence Length = 171306 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 85764 ccaccaccaccacccccat 85746
>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence Length = 184002 Score = 38.2 bits (19), Expect = 1.0 Identities = 25/27 (92%) Strand = Plus / Minus Query: 8 catcacactccaccaccaccaccccca 34 |||||| | |||||||||||||||||| Sbjct: 171403 catcaccccccaccaccaccaccccca 171377
>gb|AC140335.3| Mus musculus BAC clone RP24-64C18 from chromosome Y, complete sequence Length = 179371 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 4872 ccaccaccaccacccccat 4890
>gb|AC147126.2| Mus musculus BAC clone RP24-561J22 from chromosome Y, complete sequence Length = 141049 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 128095 ccaccaccaccacccccat 128113
>gb|AC140439.3| Mus musculus BAC clone RP24-172C23 from chromosome Y, complete sequence Length = 152300 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 23867 ccaccaccaccacccccat 23849
>gb|AC140394.3| Mus musculus BAC clone RP24-181E19 from chromosome Y, complete sequence Length = 163379 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 99888 ccaccaccaccacccccat 99870 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 31694 ccaccaccaccacccccat 31676
>gb|AC147159.2| Mus musculus BAC clone RP24-259B7 from chromosome Y, complete sequence Length = 150659 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 91790 ccaccaccaccacccccat 91808
>gb|AC132285.4| Mus musculus BAC clone RP24-354N13 from chromosome Y, complete sequence Length = 166915 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 81318 ccaccaccaccacccccat 81300
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete sequence Length = 182085 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 113250 ccaccaccaccacccccat 113232
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 catcacactccaccaccaccacc 30 |||||||| |||||||||||||| Sbjct: 143105 catcacacaccaccaccaccacc 143127
>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence Length = 188265 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accaccaccacccccatcc 37 ||||||||||||||||||| Sbjct: 12809 accaccaccacccccatcc 12791
>gb|AC113285.9| Mus musculus chromosome 5, clone RP23-407I6, complete sequence Length = 283052 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 95971 ctccaccaccaccaccccc 95953
>gb|AC126258.4| Mus musculus BAC clone RP23-325B8 from chromosome 14, complete sequence Length = 203304 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 51653 acactccaccaccaccacc 51635
>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence Length = 180931 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 catcacactccaccaccaccacc 30 |||||||| |||||||||||||| Sbjct: 172493 catcacacaccaccaccaccacc 172515
>gb|AC122349.4| Mus musculus BAC clone RP23-383O11 from chromosome 10, complete sequence Length = 188688 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccc 32 ||||||||||||||||||| Sbjct: 113294 actccaccaccaccacccc 113276
>emb|X59828.1|HSHZREP42 Human chromosome 22 flanking hypervariable simple repeat DNA (clone HZREP42) Length = 858 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 474 caccaccaccacccccatc 456 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatc 36 ||||| |||||||||||||||| Sbjct: 666 ctccatcaccaccacccccatc 645 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatc 36 ||||| |||||||||||||||| Sbjct: 495 ctccatcaccaccacccccatc 474 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatc 36 |||||||||||||||| ||||| Sbjct: 378 ctccaccaccaccacctccatc 357 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatc 36 ||||| |||||||||||||||| Sbjct: 333 ctccatcaccaccacccccatc 312
>gb|AC125112.3| Mus musculus BAC clone RP24-239I23 from chromosome 2, complete sequence Length = 149339 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 catcacactccaccaccaccacc 30 |||||||| |||||||||||||| Sbjct: 138614 catcacacaccaccaccaccacc 138592
>gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, complete sequence Length = 99973 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 58857 ctccaccaccaccaccccc 58839
>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence Length = 162530 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 140602 ctccaccaccaccaccccc 140584
>gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome 19, complete sequence Length = 219212 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||| |||||| Sbjct: 154544 ctccaccaccaccaccaccatcc 154566
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 103327 ccaccaccaccacccccat 103345
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence Length = 187221 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 catcacactccaccaccaccacc 30 |||||||| |||||||||||||| Sbjct: 147510 catcacacaccaccaccaccacc 147532
>gb|AC122828.3| Mus musculus BAC clone RP23-215B8 from 13, complete sequence Length = 198604 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 atcacactccaccaccaccaccc 31 ||||||| ||||||||||||||| Sbjct: 127076 atcacacaccaccaccaccaccc 127098
>gb|AC122298.3| Mus musculus BAC clone RP23-269A11 from 12, complete sequence Length = 151332 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 128090 acactccaccaccaccacc 128108
>gb|AC122031.2| Mus musculus BAC clone RP24-401P10 from 6, complete sequence Length = 157782 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 tccaccaccaccaccccca 34 ||||||||||||||||||| Sbjct: 84844 tccaccaccaccaccccca 84826
>gb|AC098740.3| Mus musculus BAC clone RP23-122H3 from 3, complete sequence Length = 219346 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 97632 ccaccaccaccacccccat 97650
>gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence Length = 155724 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 31117 ctccaccaccaccaccccc 31135
>gb|AC007161.1| Homo sapiens BAC clone GS1-165B14 from 7, complete sequence Length = 109343 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 8 catcacactccaccaccaccacc 30 |||||| |||||||||||||||| Sbjct: 836 catcaccctccaccaccaccacc 814
>gb|U55366.1| Caenorhabditis elegans cosmid F41F3, complete sequence Length = 26238 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||| |||||| Sbjct: 8785 ctccaccaccaccaccaccatcc 8763
>gb|AC163198.7| Mus musculus 6 BAC RP23-174M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188300 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 82058 ctccaccaccaccaccccc 82040 Score = 36.2 bits (18), Expect = 4.0 Identities = 21/22 (95%) Strand = Plus / Minus Query: 15 ctccaccaccaccacccccatc 36 |||||||||||||||| ||||| Sbjct: 161806 ctccaccaccaccaccaccatc 161785
>emb|AL672238.1| Human DNA sequence from clone RP11-293G6 on chromosome 1 Contains a NADH dehydrogenase 6 (MTND6) processed pseudogene, a NADH dehydrogenase 5 (MTND5) processed pseudogene, a NADH dehydrogenase 4 (MTND4) processed pseudogene, a NADH dehydrogenase 4L (MTND4L) processed pseudogene, a NADH dehydrogenase 3 (MTND3) processed pseudogene, a cytochrome c oxidase III (MTCO3) processed pseudogene and the 3' end of the GNG4 gene for guanine nucleotide binding protein (G protein), gamma 4, complete sequence Length = 39673 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 15980 ctccaccaccaccaccccc 15962
>emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chromosome 1 Contains the 5' end of a novel gene (FLJ40773) and a CpG island, complete sequence Length = 163621 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 158426 acactccaccaccaccacc 158444
>gb|AC175667.3| Mus musculus BAC clone RP24-372I14 from chromosome y, complete sequence Length = 167889 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 150563 ccaccaccaccacccccat 150581 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccat 35 |||||||||||||||||| Sbjct: 84707 caccaccaccacccccat 84724
>gb|AC008810.8| Homo sapiens chromosome 5 clone CTD-2096I23, complete sequence Length = 157325 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 acactccaccaccaccaccccca 34 |||| |||||||||||||||||| Sbjct: 35366 acacaccaccaccaccaccccca 35388
>gb|AY129950.1| Homo sapiens cAMP-specific phosphodiesterase 8B (PDE8B) gene, alternatively spliced, complete cds Length = 216589 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 33207 acactccaccaccaccacc 33225
>ref|XM_963264.1| PREDICTED: Tribolium castaneum similar to CG33298-PB, isoform B (LOC656757), mRNA Length = 4197 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 59 ctccaccaccaccaccccc 77
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 12 acactccaccaccaccaccccca 34 |||| |||||||||||||||||| Sbjct: 50824 acaccccaccaccaccaccccca 50802
>gb|AY117347.1| Arabidopsis thaliana unknown protein (At5g39760) mRNA, complete cds Length = 1036 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 122 tcatcaaacgccaccaccaccaccaccatcc 152
>gb|AY091034.1| Arabidopsis thaliana unknown protein (At5g39760) mRNA, complete cds Length = 1230 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 221 tcatcaaacgccaccaccaccaccaccatcc 251
>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence Length = 196119 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||||| |||| Sbjct: 71604 ctccaccaccaccaccccaatcc 71626 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccc 32 |||||||||||||||||| Sbjct: 117490 ctccaccaccaccacccc 117507
>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete sequence Length = 225212 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 128158 acactccaccaccaccacc 128140
>emb|AL772364.20| Mouse DNA sequence from clone RP23-242C19 on chromosome 11 Contains a ribosomal protein S16 (Rps16) pseudogene, the B3gnt1 gene for beta-1,3-N-acetylglucosaminyltransferase 1, the Murr1 gene for U2af1-rs1 region 1, the U2af1-rs1 gene for U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 (related sequence 1) and two CpG islands, complete sequence Length = 210863 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 75788 caccaccaccacccccatc 75806
>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete sequence Length = 215657 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccc 32 ||||||||||||||||||| Sbjct: 25606 actccaccaccaccacccc 25588
>emb|AL591174.13| Mouse DNA sequence from clone RP23-271B20 on chromosome 11, complete sequence Length = 205379 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 tccaccaccaccaccccca 34 ||||||||||||||||||| Sbjct: 76016 tccaccaccaccaccccca 75998
>gb|AC177804.3| Mus musculus BAC clone RP24-223C7 from chromosome y, complete sequence Length = 160566 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 127770 ccaccaccaccacccccat 127752
>gb|AC111170.11| Homo sapiens chromosome 17, clone RP11-75C10, complete sequence Length = 158988 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 122230 caccaccaccacccccatc 122212
>emb|AL669951.18| Mouse DNA sequence from clone RP23-94F11 on chromosome 11 Contains three novel genes, a ribosomal protein L9 (Rpl9) pseudogene, a transcription elongation factor A (SII) 3 (Tcea3) pseudogene and the 3' end of the Fbxw1b gene for F-box and WD-40 domain protein 1B, complete sequence Length = 251085 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 157301 ctccaccaccaccaccccc 157283
>emb|AL691491.11| Mouse DNA sequence from clone RP23-426J14 on chromosome 4 Contains the 5' end of the Pappa gene for pregnancy-associated plasma protein A and a Cpg island, complete sequence Length = 199017 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||| |||||||||||| Sbjct: 45508 ctccaccacccccacccccatcc 45530
>emb|CR861372.1| Pongo pygmaeus mRNA; cDNA DKFZp459A152 (from clone DKFZp459A152) Length = 3330 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 898 ctccaccaccaccaccccc 916
>dbj|AB252988.1| Tricholoma matsutake DNA, microsatellite marker Trma10 Length = 160 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 cacactccaccaccaccac 29 ||||||||||||||||||| Sbjct: 28 cacactccaccaccaccac 46
>gb|AC182040.3| Mus musculus BAC clone RP24-26M10 from chromosome y, complete sequence Length = 242066 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 240990 ccaccaccaccacccccat 240972 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 175209 ccaccaccaccacccccat 175191
>gb|AC099785.2| Homo sapiens chromosome 1 clone RP11-435I3, complete sequence Length = 186160 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 5991 acactccaccaccaccacc 6009
>gb|AC182448.2| Mus musculus BAC clone RP24-490J20 from chromosome y, complete sequence Length = 222797 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 34601 ccaccaccaccacccccat 34583
>gb|AC179922.3| Mus musculus BAC clone RP24-571K5 from chromosome y, complete sequence Length = 151241 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 146068 ccaccaccaccacccccat 146086 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 77874 ccaccaccaccacccccat 77892
>emb|BX510352.17| Zebrafish DNA sequence from clone DKEY-96J11 in linkage group 18, complete sequence Length = 152387 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 61436 ctccaccaccaccaccccc 61454
>gb|AC090431.9| Mus Musculus Strain C57BL6/J chromosome 14 RP23-324C9, complete sequence Length = 227949 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 201228 acactccaccaccaccacc 201246 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 201236 ccaccaccaccaccccca 201253
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 1195035 ccaccaccaccacccccat 1195053 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 1174685 ccaccaccaccaccccca 1174668
>ref|NM_079504.3| Drosophila melanogaster odd paired CG1133-RA (opa), mRNA Length = 2947 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 1878 caccaccaccacccccatc 1896
>gb|AC182761.2| Mus musculus BAC clone RP24-91P5 from chromosome y, complete sequence Length = 212528 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 114267 ccaccaccaccacccccat 114249 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 48281 ccaccaccaccacccccat 48263
>gb|AC064805.13| Homo sapiens chromosome 17, clone CTD-2006K23, complete sequence Length = 87833 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cactccaccaccaccaccc 31 ||||||||||||||||||| Sbjct: 78878 cactccaccaccaccaccc 78896
>gb|AC008922.7| Homo sapiens chromosome 5 clone CTD-2281D13, complete sequence Length = 85773 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 12 acactccaccaccaccaccccca 34 |||| |||||||||||||||||| Sbjct: 78349 acacaccaccaccaccaccccca 78371
>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence Length = 194297 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 178491 ctccaccaccaccaccccc 178509
>ref|XM_696056.1| PREDICTED: Danio rerio similar to Tensin (LOC572346), partial mRNA Length = 1481 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 tccaccaccaccaccccca 34 ||||||||||||||||||| Sbjct: 374 tccaccaccaccaccccca 356
>gb|AC175385.3| Mus musculus BAC clone RP24-169E18 from chromosome y, complete sequence Length = 144283 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 74079 ccaccaccaccacccccat 74097 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 5881 ccaccaccaccacccccat 5899
>gb|AC182554.2| Mus musculus BAC clone RP24-307C8 from chromosome y, complete sequence Length = 138532 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 8546 ccaccaccaccacccccat 8564
>gb|S78339.1| opa=odd-paired [Drosophila, embryo, mRNA, 2959 nt] Length = 2959 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 1878 caccaccaccacccccatc 1896
>gb|AY051783.1| Drosophila melanogaster LD30441 full length cDNA Length = 2927 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 caccaccaccacccccatc 36 ||||||||||||||||||| Sbjct: 1846 caccaccaccacccccatc 1864
>gb|AC163279.6| Mus musculus BAC clone RP24-112D16 from chromosome y, complete sequence Length = 198421 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 195651 ccaccaccaccacccccat 195633
>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete sequence Length = 195224 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 12 acactccaccaccaccaccccca 34 |||| |||||||||||||||||| Sbjct: 120255 acacaccaccaccaccaccccca 120233
>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete sequence Length = 193594 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 cacactccaccaccaccac 29 ||||||||||||||||||| Sbjct: 129079 cacactccaccaccaccac 129061
>gb|AC140285.4| Mus musculus BAC clone RP24-559A5 from chromosome 12, complete sequence Length = 170917 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 19951 acactccaccaccaccacc 19969
>dbj|AK084958.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430019H15 product:unclassifiable, full insert sequence Length = 3086 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 catcacactccaccaccaccacc 30 |||||||| |||||||||||||| Sbjct: 2006 catcacacaccaccaccaccacc 2028
>ref|NM_071850.3| Caenorhabditis elegans F41F3.3 (cuticlin) mRNA, complete cds Length = 587 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||| |||||| Sbjct: 91 ctccaccaccaccaccaccatcc 113
>ref|NG_005185.1| Mus musculus type I keratin KA11P (Ka11p) pseudogene on chromosome 11 Length = 4908 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccc 32 ||||||||||||||||||| Sbjct: 4562 actccaccaccaccacccc 4544
>tpg|BK004024.1| TPA: TPA_exp: Mus musculus type I keratin KA11P (Ka11p) pseudogene, complete sequence Length = 4908 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 14 actccaccaccaccacccc 32 ||||||||||||||||||| Sbjct: 4562 actccaccaccaccacccc 4544
>gb|AC120549.22| Mus musculus chromosome 1, clone RP23-172L16, complete sequence Length = 210516 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 tcacactccaccaccaccacccc 32 |||||| |||||||||||||||| Sbjct: 104463 tcacacaccaccaccaccacccc 104441
>gb|AC145765.2| Gasterosteus aculeatus clone CH213-7I21, complete sequence Length = 209087 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 163384 ctccaccaccaccaccccc 163402
>gb|AC010843.10|AC010843 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone BACR08A22, complete sequence Length = 170914 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 27959 ccaccaccaccacccccat 27941
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 26114512 ctccaccaccaccaccccc 26114530 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 2682982 ctccaccaccaccaccccc 2682964 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 22786353 ccaccaccaccaccccca 22786336 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Minus Query: 20 ccaccaccacccccatcc 37 |||||||||||||||||| Sbjct: 18886720 ccaccaccacccccatcc 18886703 Score = 36.2 bits (18), Expect = 4.0 Identities = 18/18 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccaccccca 34 |||||||||||||||||| Sbjct: 8153444 ccaccaccaccaccccca 8153461
>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence Length = 182611 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 178040 ccaccaccaccacccccat 178022
>emb|BX830540.1|CNS0A03O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1289 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 223 tcatcaaacgccaccaccaccaccaccatcc 253
>emb|BX829417.1|CNS09ZXY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1304 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 217 tcatcaaacgccaccaccaccaccaccatcc 247
>gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosome 14, complete sequence Length = 198799 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 88569 ccaccaccaccacccccat 88551
>gb|AC145572.4| Mus musculus BAC clone RP24-95P13 from chromosome y, complete sequence Length = 181745 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 75760 ccaccaccaccacccccat 75742 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 9969 ccaccaccaccacccccat 9951
>gb|AF305060.1|AF305060 Dictyostelium discoideum Wiscott-Aldrich syndrome protein (wasA) gene, complete cds Length = 1741 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 15 ctccaccaccaccacccccatcc 37 |||||||||||||||| |||||| Sbjct: 1278 ctccaccaccaccaccaccatcc 1300
>gb|AC005007.1|AC005007 Homo sapiens BAC clone GS1-51M12 from 7p21-p22, complete sequence Length = 136862 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 accaccaccacccccatcc 37 ||||||||||||||||||| Sbjct: 109706 accaccaccacccccatcc 109688
>gb|DQ003136.1| Homo sapiens replication protein A3, 14kDa (RPA3) gene, complete cds Length = 85575 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 catcacactccaccaccaccacc 30 |||||| |||||||||||||||| Sbjct: 28340 catcaccctccaccaccaccacc 28362
>gb|AC078790.2| Mus musculus strain C57BL6/J chromosome 6 clone RP23-232C14, complete sequence Length = 173690 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 17690 ccaccaccaccacccccat 17708
>gb|AC022414.8| Homo sapiens chromosome 5 clone CTC-316M18, complete sequence Length = 128811 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 acactccaccaccaccacc 30 ||||||||||||||||||| Sbjct: 55885 acactccaccaccaccacc 55867
>gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence Length = 207865 Score = 38.2 bits (19), Expect = 1.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 tccaccaccaccacccccatcca 38 ||||||||| ||||||||||||| Sbjct: 186840 tccaccacccccacccccatcca 186862
>gb|AY086395.1| Arabidopsis thaliana clone 249321 mRNA, complete sequence Length = 1330 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 251 tcatcaaacgccaccaccaccaccaccatcc 281
>gb|AC174381.2| Mus musculus BAC clone RP24-206F6 from chromosome y, complete sequence Length = 172601 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 144956 ccaccaccaccacccccat 144938
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence Length = 163597 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 cactccaccaccaccaccc 31 ||||||||||||||||||| Sbjct: 40008 cactccaccaccaccaccc 40026
>gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome 17, complete sequence Length = 218488 Score = 38.2 bits (19), Expect = 1.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 8 catcacactccaccaccaccaccccca 34 |||||| | |||||||||||||||||| Sbjct: 106252 catcaccccccaccaccaccaccccca 106278
>gb|AC148320.3| Mus musculus BAC clone RP24-555B2 from chromosome y, complete sequence Length = 192936 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 20389 ccaccaccaccacccccat 20407
>gb|AF124051.1|AF124051 Fugu rubripes double stranded RNA adenosine deaminase RED2 gene, partial cds Length = 51000 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 5011 ccaccaccaccacccccat 4993
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 138323 ctccaccaccaccaccccc 138305
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 94729 ctccaccaccaccaccccc 94711
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 ctccaccaccaccaccccc 33 ||||||||||||||||||| Sbjct: 93757 ctccaccaccaccaccccc 93775
>dbj|AB016876.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21 Length = 44499 Score = 38.2 bits (19), Expect = 1.0 Identities = 28/31 (90%) Strand = Plus / Plus Query: 7 tcatcacactccaccaccaccacccccatcc 37 |||||| || |||||||||||||| |||||| Sbjct: 15142 tcatcaaacgccaccaccaccaccaccatcc 15172
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence Length = 214840 Score = 38.2 bits (19), Expect = 1.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 ccaccaccaccacccccat 35 ||||||||||||||||||| Sbjct: 81191 ccaccaccaccacccccat 81173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 867,424 Number of Sequences: 3902068 Number of extensions: 867424 Number of successful extensions: 422527 Number of sequences better than 10.0: 1297 Number of HSP's better than 10.0 without gapping: 1316 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 403229 Number of HSP's gapped (non-prelim): 18290 length of query: 38 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 18 effective length of database: 17,155,003,908 effective search space: 308790070344 effective search space used: 308790070344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)