ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart13f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branche... 492 e-136
2ref|XM_470612.1| Oryza sativa (japonica cultivar-group), predic... 347 2e-92
3dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
4dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 256 7e-65
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 256 7e-65
7gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome... 256 7e-65
8gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome... 256 7e-65
9ref|XM_550246.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.8
10gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.8
11gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.8
12gb|DQ356948.1| Crocodilepox virus, complete genome 42 1.8
13gb|BC098973.1| Xenopus laevis cDNA clone IMAGE:4031980, partial cds 42 1.8
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 1.8
16dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
17gb|AE005046.1| Halobacterium sp. NRC-1 section 77 of 170 of the ... 42 1.8
18gb|BC082673.1| Xenopus laevis hypothetical LOC494683, mRNA (cDNA... 42 1.8
19ref|XM_467388.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.3
20gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 40 7.3
21emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 7.3
22gb|AC093554.1| Leishmania donovani clone XX-BNI_Clos13.12, compl... 40 7.3
23gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence 40 7.3
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
25gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.3
26dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
27dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
28dbj|AK065585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
29gb|AY913037.1| Uncultured forest soil bacterium clone DUNnos165 ... 40 7.3
30gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.3
31emb|AL589696.10| Mouse DNA sequence from clone RP23-454M13 on ch... 40 7.3 
>emb|AJ574850.2|HVU574850 Hordeum vulgare bcat-1 gene for branched-chain amino acid
            aminotransferase, exons 1-7
          Length = 4318

 Score =  492 bits (248), Expect = e-136
 Identities = 248/248 (100%)
 Strand = Plus / Plus

                                                                        
Query: 289  caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 2635

                                                                        
Query: 349  cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2636 cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 2695

                                                                        
Query: 409  cgagctcgcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacgg 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2696 cgagctcgcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacgg 2755

                                                                        
Query: 469  ccaggggctgttcgaggggctgaaggcgtacaggcggtcggacggggccgggtacatgct 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2756 ccaggggctgttcgaggggctgaaggcgtacaggcggtcggacggggccgggtacatgct 2815

                    
Query: 529  gttccggc 536
            ||||||||
Sbjct: 2816 gttccggc 2823



 Score =  438 bits (221), Expect = e-120
 Identities = 221/221 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    aactcgccagtgctgcgctctcgtccgaccacatagcgtctgcaaaccattcatttgctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 aactcgccagtgctgcgctctcgtccgaccacatagcgtctgcaaaccattcatttgctc 1945

                                                                        
Query: 61   gccgtgaaggatcgagttcttgaacagctttggcgatcgatctagggagcgcgggccgcc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 gccgtgaaggatcgagttcttgaacagctttggcgatcgatctagggagcgcgggccgcc 2005

                                                                        
Query: 121  cgggcgtgcgtgcatggctgtgctgtcttctgcgaagcgcgtcctcccgtgcgcctcggc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 cgggcgtgcgtgcatggctgtgctgtcttctgcgaagcgcgtcctcccgtgcgcctcggc 2065

                                                     
Query: 181  cggcggggtcagcggcggcctccgagctctactcgggacgg 221
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 cggcggggtcagcggcggcctccgagctctactcgggacgg 2106



 Score =  147 bits (74), Expect = 4e-32
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                        
Query: 220  ggacggaggcggccgctctcttctcccgtcccggtggaagtcgtcgctgccgcagctgga 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 ggacggaggcggccgctctcttctcccgtcccggtggaagtcgtcgctgccgcagctgga 2403

                          
Query: 280  ccccgtcgacaggt 293
            ||||||||||||||
Sbjct: 2404 ccccgtcgacaggt 2417
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>ref|XM_470612.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1248

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Plus

                                                                       
Query: 236 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggtcc 295
           ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||||
Sbjct: 157 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggtcc 216

                                                                       
Query: 296 gacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcaccccgacg 355
           || ||||| ||||||||||| ||||||||||||||||| || |||||||| || ||||| 
Sbjct: 217 gatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgacgccgacc 276

                                                                       
Query: 356 gactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcggcgagctc 415
           |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||
Sbjct: 277 gactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcggcgagctc 336

                                                                       
Query: 416 gcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacggccagggg 475
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 337 agccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacggccagggg 396

                                      
Query: 476 ctgttcgaggggctgaaggcgtacagg 502
           || |||||||| |||||||||||||||
Sbjct: 397 ctcttcgagggtctgaaggcgtacagg 423
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>dbj|AK120579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135J09, full
           insert sequence
          Length = 1738

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Plus

                                                                       
Query: 236 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggtcc 295
           ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||||
Sbjct: 277 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggtcc 336

                                                                       
Query: 296 gacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcaccccgacg 355
           || ||||| ||||||||||| ||||||||||||||||| || |||||||| || ||||| 
Sbjct: 337 gatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgacgccgacc 396

                                                                       
Query: 356 gactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcggcgagctc 415
           |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||
Sbjct: 397 gactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcggcgagctc 456

                                                                       
Query: 416 gcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacggccagggg 475
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 457 agccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacggccagggg 516

                                      
Query: 476 ctgttcgaggggctgaaggcgtacagg 502
           || |||||||| |||||||||||||||
Sbjct: 517 ctcttcgagggtctgaaggcgtacagg 543
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>dbj|AK105963.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E04, full
           insert sequence
          Length = 1577

 Score =  347 bits (175), Expect = 2e-92
 Identities = 244/267 (91%)
 Strand = Plus / Plus

                                                                       
Query: 236 tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggtcc 295
           ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||||
Sbjct: 272 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggtcc 331

                                                                       
Query: 296 gacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcaccccgacg 355
           || ||||| ||||||||||| ||||||||||||||||| || |||||||| || ||||| 
Sbjct: 332 gatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgacgccgacc 391

                                                                       
Query: 356 gactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcggcgagctc 415
           |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||
Sbjct: 392 gactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcggcgagctc 451

                                                                       
Query: 416 gcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacggccagggg 475
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 452 agccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacggccagggg 511

                                      
Query: 476 ctgttcgaggggctgaaggcgtacagg 502
           || |||||||| |||||||||||||||
Sbjct: 512 ctcttcgagggtctgaaggcgtacagg 538
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  256 bits (129), Expect = 7e-65
 Identities = 171/185 (92%)
 Strand = Plus / Plus

                                                                           
Query: 289     caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 348
               ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 6918259 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 6918318

                                                                           
Query: 349     cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 408
                ||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 6918319 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 6918378

                                                                           
Query: 409     cgagctcgcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacgg 468
               |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6918379 cgagctcagccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacgg 6918438

                    
Query: 469     ccagg 473
               |||||
Sbjct: 6918439 ccagg 6918443



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                         
Query: 236     tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 293
               ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 6918070 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 6918127



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 470     caggggctgttcgaggggctgaaggcgtacagg 502
               |||||||| |||||||| |||||||||||||||
Sbjct: 6918563 caggggctcttcgagggtctgaaggcgtacagg 6918595
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  256 bits (129), Expect = 7e-65
 Identities = 171/185 (92%)
 Strand = Plus / Plus

                                                                           
Query: 289     caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 348
               ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 6916154 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 6916213

                                                                           
Query: 349     cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 408
                ||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 6916214 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 6916273

                                                                           
Query: 409     cgagctcgcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacgg 468
               |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6916274 cgagctcagccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacgg 6916333

                    
Query: 469     ccagg 473
               |||||
Sbjct: 6916334 ccagg 6916338



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                         
Query: 236     tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 293
               ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 6915965 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 6916022



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 470     caggggctgttcgaggggctgaaggcgtacagg 502
               |||||||| |||||||| |||||||||||||||
Sbjct: 6916458 caggggctcttcgagggtctgaaggcgtacagg 6916490
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>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12,
              complete sequence
          Length = 120392

 Score =  256 bits (129), Expect = 7e-65
 Identities = 171/185 (92%)
 Strand = Plus / Plus

                                                                          
Query: 289    caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 348
              ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 114192 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 114251

                                                                          
Query: 349    cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 408
               ||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 114252 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 114311

                                                                          
Query: 409    cgagctcgcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacgg 468
              |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 114312 cgagctcagccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacgg 114371

                   
Query: 469    ccagg 473
              |||||
Sbjct: 114372 ccagg 114376



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                        
Query: 236    tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 293
              ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 114003 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 114060



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 470    caggggctgttcgaggggctgaaggcgtacagg 502
              |||||||| |||||||| |||||||||||||||
Sbjct: 114496 caggggctcttcgagggtctgaaggcgtacagg 114528
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>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11,
             complete sequence
          Length = 166072

 Score =  256 bits (129), Expect = 7e-65
 Identities = 171/185 (92%)
 Strand = Plus / Plus

                                                                         
Query: 289   caggtccgacgaggagagcggcggcgacatcgactgggacaacctcggcttcgggctcac 348
             ||||||||| ||||| ||||||||||| ||||||||||||||||| || |||||||| ||
Sbjct: 84856 caggtccgatgaggaaagcggcggcgaaatcgactgggacaacctggggttcgggctgac 84915

                                                                         
Query: 349   cccgacggactacatgtacgtcatgcggtgctcgcgggaggagggcggcttctcccgcgg 408
              ||||| |||||||||||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct: 84916 gccgaccgactacatgtacgtcatgcggtgctcgctggaggacggcgtcttctcccgcgg 84975

                                                                         
Query: 409   cgagctcgcccgctacggcaacatcgagctcagcccctcctccggcgtcctcaactacgg 468
             |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 84976 cgagctcagccgctacggcaacatcgagctcagcccctcctccggcgtcatcaactacgg 85035

                  
Query: 469   ccagg 473
             |||||
Sbjct: 85036 ccagg 85040



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                       
Query: 236   tctcttctcccgtcccggtggaagtcgtcgctgccgcagctggaccccgtcgacaggt 293
             ||||| |||| || |||||||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 84667 tctctgctccagtgccggtggaggtcgtcgctgccgcagctcgactccgccgacaggt 84724



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 470   caggggctgttcgaggggctgaaggcgtacagg 502
             |||||||| |||||||| |||||||||||||||
Sbjct: 85160 caggggctcttcgagggtctgaaggcgtacagg 85192
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>ref|XM_550246.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 375

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 296 gacgaggagagcggcggcgacatcg 320
           ||||||||||||||||||| |||||
Sbjct: 57  gacgaggagagcggcggcggcatcg 33
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 313     cgacatcgactgggacaacctcggc 337
               |||||||||||||||||||| ||||
Sbjct: 3850596 cgacatcgactgggacaaccccggc 3850572
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 479     ttcgaggggctgaaggcgtac 499
               |||||||||||||||||||||
Sbjct: 1365088 ttcgaggggctgaaggcgtac 1365068
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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 264   cgctgccgcagctggaccccg 284
             |||||||||||||||||||||
Sbjct: 34500 cgctgccgcagctggaccccg 34480
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>gb|BC098973.1| Xenopus laevis cDNA clone IMAGE:4031980, partial cds
          Length = 2486

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 475 gctgttcgaggggctgaaggc 495
           |||||||||||||||||||||
Sbjct: 330 gctgttcgaggggctgaaggc 350
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 296     gacgaggagagcggcggcgacatcg 320
               ||||||||||||||||||| |||||
Sbjct: 3371817 gacgaggagagcggcggcggcatcg 3371841
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 412     gctcgcccgctacggcaacat 432
               |||||||||||||||||||||
Sbjct: 1592126 gctcgcccgctacggcaacat 1592146
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0701D05
          Length = 172161

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 296   gacgaggagagcggcggcgacatcg 320
             ||||||||||||||||||| |||||
Sbjct: 50187 gacgaggagagcggcggcggcatcg 50211
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>gb|AE005046.1| Halobacterium sp. NRC-1 section 77 of 170 of the complete genome
          Length = 10159

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 309  gcggcgacatcgactgggacaacctcggc 337
            |||||| ||||||||||| ||||||||||
Sbjct: 5025 gcggcggcatcgactggggcaacctcggc 5053
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>gb|BC082673.1| Xenopus laevis hypothetical LOC494683, mRNA (cDNA clone MGC:83499
           IMAGE:4740501), complete cds
          Length = 3329

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 475 gctgttcgaggggctgaaggc 495
           |||||||||||||||||||||
Sbjct: 442 gctgttcgaggggctgaaggc 462
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>ref|XM_467388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 392 ggcggcttctcccgcggcgagctc 415
           ||||||| ||||||||||||||||
Sbjct: 255 ggcggctactcccgcggcgagctc 278
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    gcgtgcgtgcatggctgtgc 143
              ||||||||||||||||||||
Sbjct: 114636 gcgtgcgtgcatggctgtgc 114617
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    ggacggacggaggcggccgc 235
              ||||||||||||||||||||
Sbjct: 111356 ggacggacggaggcggccgc 111375
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>gb|AC093554.1| Leishmania donovani clone XX-BNI_Clos13.12, complete sequence
          Length = 33494

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ccgacgaggagagcggcggc 313
            ||||||||||||||||||||
Sbjct: 5007 ccgacgaggagagcggcggc 5026
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>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    ggcggcttctcccgcggcgagctc 415
              ||||||| ||||||||||||||||
Sbjct: 110195 ggcggctactcccgcggcgagctc 110218
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 392      ggcggcttctcccgcggcgagctc 415
                ||||||| ||||||||||||||||
Sbjct: 29252436 ggcggctactcccgcggcgagctc 29252413
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 462     actacggccaggggctgttcgaggggctgaaggcgt 497
               ||||||| |||| | | |||||||||||||||||||
Sbjct: 3943861 actacgggcaggcgatcttcgaggggctgaaggcgt 3943826
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>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0060O16
          Length = 164373

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 392   ggcggcttctcccgcggcgagctc 415
             ||||||| ||||||||||||||||
Sbjct: 49781 ggcggctactcccgcggcgagctc 49758
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>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0680A05
          Length = 168092

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 392    ggcggcttctcccgcggcgagctc 415
              ||||||| ||||||||||||||||
Sbjct: 142404 ggcggctactcccgcggcgagctc 142381
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>dbj|AK065585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M23, full
           insert sequence
          Length = 1821

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 392 ggcggcttctcccgcggcgagctc 415
           ||||||| ||||||||||||||||
Sbjct: 254 ggcggctactcccgcggcgagctc 277
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>gb|AY913037.1| Uncultured forest soil bacterium clone DUNnos165 nitrous oxide
           reductase (nosZ) gene, partial cds
          Length = 672

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 cgcgggccgcccgggcgtgc 129
           ||||||||||||||||||||
Sbjct: 633 cgcgggccgcccgggcgtgc 652
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 494     gcgtacaggcggtcggacgg 513
               ||||||||||||||||||||
Sbjct: 1855512 gcgtacaggcggtcggacgg 1855531
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>emb|AL589696.10| Mouse DNA sequence from clone RP23-454M13 on chromosome 15, complete
             sequence
          Length = 207431

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gcgtgcgtgcatggctgtgc 143
             ||||||||||||||||||||
Sbjct: 46022 gcgtgcgtgcatggctgtgc 46041


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,877,426
Number of Sequences: 3902068
Number of extensions: 2877426
Number of successful extensions: 58331
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57551
Number of HSP's gapped (non-prelim): 780
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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