Clone Name | bart13f02 |
---|---|
Clone Library Name | barley_pub |
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 32.0 bits (71), Expect(2) = 0.046 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = -1 Query: 535 NRAPEQQRCKPALDHR----RRPGPNSLPSGPRPRPGAHAAWP----RCHAPSRSTPRAL 380 +R+P R P HR RRP P PS R P P R +P R R+ Sbjct: 291 SRSPSHSR--PRRRHRSRSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSS 348 Query: 379 ADLTDAYSTHAPSRTGATPRR 317 A L+ + S+ + SR+ + P++ Sbjct: 349 ASLSGSSSSSSSSRSRSPPKK 369 Score = 31.6 bits (70), Expect = 1.5 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = -3 Query: 401 PLHSTCPRRSHRCLFHPRALADGRDAPPHADPARSVPGPPLHSLAAPP 258 P HS PRR HR R R +P P R +P PP H + P Sbjct: 294 PSHSR-PRRRHRSRSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSP 340 Score = 23.5 bits (49), Expect(2) = 0.046 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 5/29 (17%) Frame = -3 Query: 326 APPHADPARSVPGPP-----LHSLAAPPR 255 +PP P R+V PP L A+PPR Sbjct: 365 SPPKKPPKRTVSSPPRKTRRLSPSASPPR 393
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)| (L(1)omb) (Protein bifid) Length = 972 Score = 35.0 bits (79), Expect = 0.14 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 8/54 (14%) Frame = -1 Query: 478 GPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRAL--------ADLTDAYSTHAPS 341 GP SL S PRPRP +H+ R + S +TP +L A A S H+PS Sbjct: 834 GPRSLSSSPRPRPASHSPPTRPISMSPTTPPSLMKQPRGGGAGAGVAQSQHSPS 887
>NEK1_CAEEL (P84199) Serine/threonine-protein kinase D1044.8 (EC 2.7.11.1)| Length = 959 Score = 34.7 bits (78), Expect = 0.18 Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Frame = -1 Query: 487 RRPGPNSLPSGPRPRPGAHAAWPRCHAPSRS-TPR-----ALADLTDAYSTHAPSRTGAT 326 +RPG +S SG P + A R H+ S TPR L +TD YS PS A Sbjct: 742 KRPGRSSKTSGSGKLPPINPAPRRNHSMSAGETPRPSSIVCLPRITDKYSVMFPSAPSAI 801 Query: 325 PRRTQIQ 305 P R ++Q Sbjct: 802 PSRRRVQ 808
>DTX2_MOUSE (Q8R3P2) Protein deltex-2 (Deltex-2) (Deltex2) (mDTX2)| Length = 619 Score = 34.7 bits (78), Expect = 0.18 Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 8/95 (8%) Frame = -1 Query: 544 HPWNRAP----EQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALA 377 +PW AP Q +L H GP LPSGP GA A++P PS S+P + Sbjct: 264 NPWAAAPPVAGNQSLFHSSLSHL---GPQLLPSGPSTSSGASASFP--SGPSSSSPGSAP 318 Query: 376 DLTDAYSTHA----PSRTGATPRRTQIQLEACLAR 284 A + G T + I L CL+R Sbjct: 319 TTVPVQMPKASRVQQALAGMTSVLSAIGLPVCLSR 353
>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) Length = 1105 Score = 31.2 bits (69), Expect(2) = 0.44 Identities = 24/74 (32%), Positives = 30/74 (40%) Frame = -1 Query: 544 HPWNRAPEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTD 365 HP P QQ L H + P P+ P P PG + P H P R P A++ Sbjct: 987 HP-GMMPHQQPPPYPLMHHQMPPPH--PPQPGQIPGPGSMMPGQHMPGRMIPTVAANI-- 1041 Query: 364 AYSTHAPSRTGATP 323 PS +G TP Sbjct: 1042 -----HPSGSGPTP 1050 Score = 20.8 bits (42), Expect(2) = 0.44 Identities = 8/14 (57%), Positives = 8/14 (57%) Frame = -3 Query: 323 PPHADPARSVPGPP 282 PP PA VP PP Sbjct: 1082 PPPPPPADGVPPPP 1095
>CXA12_HUMAN (Q5T442) Gap junction alpha-12 protein (Connexin-47) (Cx47)| (Connexin-46.6) (Cx46.6) Length = 439 Score = 33.1 bits (74), Expect = 0.52 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = -1 Query: 544 HPWNRAPEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWP 419 H RA EQ+R + RRRPGP P P P HA WP Sbjct: 100 HRLARASEQERRRAL---RRRPGPRRAPRAHLPPP--HAGWP 136
>Y498_MYCBO (P64712) Hypothetical protein Mb0498| Length = 201 Score = 32.7 bits (73), Expect = 0.67 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -1 Query: 133 VRRRRGEAWLVGAALLTARVRFRPPAGATRKRGKACFIGLVSL 5 V R G A+L+G ALL AR +RP + G A IG+V + Sbjct: 60 VARFGGAAFLIGYALLAARNAWRPSGLVPSESGPAALIGVVQM 102
>Y488_MYCTU (P64711) Hypothetical protein Rv0488/MT0507| Length = 201 Score = 32.7 bits (73), Expect = 0.67 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -1 Query: 133 VRRRRGEAWLVGAALLTARVRFRPPAGATRKRGKACFIGLVSL 5 V R G A+L+G ALL AR +RP + G A IG+V + Sbjct: 60 VARFGGAAFLIGYALLAARNAWRPSGLVPSESGPAALIGVVQM 102
>MIS_BOVIN (P03972) Muellerian-inhibiting factor precursor (MIS)| (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting substance) Length = 575 Score = 32.7 bits (73), Expect = 0.67 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 13/66 (19%) Frame = -3 Query: 404 IPLHSTCPRRSHRCLF-----HPRALADGRDAPPHADP--------ARSVPGPPLHSLAA 264 +P S+ P +H L PRA + +APP ADP R++ GPP + A+ Sbjct: 267 LPARSSAPMPAHGRLDLVPFPQPRASPEPEEAPPSADPFLETLTRLVRALAGPP--ARAS 324 Query: 263 PPRASV 246 PPR ++ Sbjct: 325 PPRLAL 330
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 32.7 bits (73), Expect = 0.67 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -1 Query: 532 RAPEQQRCKPALDHRRRPGPN-SLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLT 368 R E K A + +PGP S G +P PG PR AP+ S P+A A+ T Sbjct: 46 RLRESFASKSAPANGAKPGPAASARPGAKPTPGGPRPGPRTPAPAASAPQAPAEQT 101 Score = 30.0 bits (66), Expect = 4.4 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 10/87 (11%) Frame = -1 Query: 544 HPWNRAPEQQRCKPALDHRRRPGPNS-----LPSGPRPRPGAHAAWPRC-----HAPSRS 395 +P++ P +R +PA RPGP GPRP PG A P A ++ Sbjct: 181 NPYSSQPAPERERPAA----RPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQG 236 Query: 394 TPRALADLTDAYSTHAPSRTGATPRRT 314 PR S GA P+RT Sbjct: 237 GPRPGGPRPSPGSMPPRPNPGAMPQRT 263
>PROB_SYNPX (Q7U842) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 357 Score = 32.7 bits (73), Expect = 0.67 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +3 Query: 438 PGRGRGPDGREFGPGRLRWSSAGLQRCCSGA 530 P R +GPDGRE G G + SSA +QR A Sbjct: 307 PVRLQGPDGRELGRGLCQLSSAAVQRALDAA 337
>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC| 3.4.22.-) (p150); RNA-directed RNA polymerase/helicase (EC 2.7.7.48) (EC 3.6.1.-) (p90)] Length = 2115 Score = 32.7 bits (73), Expect = 0.67 Identities = 24/52 (46%), Positives = 26/52 (50%) Frame = -3 Query: 407 PIPLHSTCPRRSHRCLFHPRALADGRDAPPHADPARSVPGPPLHSLAAPPRA 252 P P PRR+ R H +D R PP A PAR P PP S APPRA Sbjct: 721 PPPGDPPPPRRARRSQRH----SDARGTPPPA-PARDPP-PPAPSPPAPPRA 766
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 32.3 bits (72), Expect = 0.88 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = -1 Query: 490 RRRPGPNSLPSGPRPRPGAHAAWP----RCHAPSRSTPRALADLTDAYSTHAPSRTGATP 323 RRRP P PS R P P R +P R R+ A L+ + S+ + SR+ + P Sbjct: 310 RRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPP 369 Query: 322 RR 317 ++ Sbjct: 370 KK 371
>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex| combs) Length = 1368 Score = 26.6 bits (57), Expect(2) = 0.92 Identities = 11/36 (30%), Positives = 16/36 (44%) Frame = -2 Query: 468 PSRLDHDHALAPTQHGLAAMPHPAPLHVPSQISPMP 361 P H H A + MP P PL +P ++ +P Sbjct: 889 PKHAGHGHGAAKRSCQMPTMPMPLPLPLPMPMTTIP 924 Score = 24.3 bits (51), Expect(2) = 0.92 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = -3 Query: 353 PRALADGRD--APPHADPARSVPGPPLHSLAAPPRA 252 P AL + R+ AP H+ P++S P +S +PP A Sbjct: 956 PPALINLRNTAAPQHSFPSKSSPKVEANSKKSPPAA 991
>ATOH1_PANTR (Q5IS79) Atonal protein homolog 1| Length = 356 Score = 31.6 bits (70), Expect = 1.5 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 2/80 (2%) Frame = -1 Query: 529 APEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHA-PSRSTPRALADLTDAYST 353 A E K DH R+P P+ LP P P P A + P +L D TD + Sbjct: 7 AEEWAEVKELGDHHRQPQPHHLPQPPPPPPPQPPATLQAREHPVYPPELSLLDSTDPRAW 66 Query: 352 HAPSRTG-ATPRRTQIQLEA 296 AP+ G T R Q L + Sbjct: 67 LAPTLQGICTARAAQYLLHS 86
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = -1 Query: 490 RRRPGPNSLPSGPRPRPGAHAAWP----RCHAPSRSTPRALADLTDAYSTHAPSRTGATP 323 RRRP P PS R P P R +P R R+ A L+ + S+ + SR+ + P Sbjct: 312 RRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP 371 Query: 322 RR 317 ++ Sbjct: 372 KK 373
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 31.6 bits (70), Expect = 1.5 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 3/95 (3%) Frame = -3 Query: 536 EQGTRAAALQACTRPPKTPGAELXX--XXXXXXXXXXRSMASLPCPIPLHSTCPRRSHRC 363 ++G R A A PP +P A S A+ P P P + PRR R Sbjct: 410 DEGVRPGAPLARAGPPPSPPAPAAAPRPSASSASATSSSAAASPAPAPEPARPPRRKRRS 469 Query: 362 L-FHPRALADGRDAPPHADPARSVPGPPLHSLAAP 261 H +ADG PP D GP L L P Sbjct: 470 TNNHLSLMADG---PPPTD------GPLLTPLGEP 495 Score = 30.4 bits (67), Expect = 3.3 Identities = 24/60 (40%), Positives = 30/60 (50%) Frame = -1 Query: 496 DHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTGATPRR 317 D RPG +GP P P A AA PR PS S+ A A + A ++ AP+ A P R Sbjct: 410 DEGVRPGAPLARAGPPPSPPAPAAAPR---PSASS--ASATSSSAAASPAPAPEPARPPR 464
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -1 Query: 520 QQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPS 341 ++R PA ++ +S P RPR GAH R A +ST ++ L A +PS Sbjct: 1015 RRRSSPARSRIKQGRSSSFPGRRRPRGGAHGGRGRGRARLKSTASSIETLVVADIDSSPS 1074 Query: 340 R 338 + Sbjct: 1075 K 1075
>RGDSR_HUMAN (Q8IZJ4) Ral-GDS-related protein (hRGR)| Length = 473 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -1 Query: 481 PGPNSL-PSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTG 332 P PN P P PRPG HA P+ P LADL A +P+ G Sbjct: 116 PEPNEAKPDDPAPRPGQHALTMPALEPA---PPLLADLGPALEPESPAALG 163
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 31.6 bits (70), Expect = 1.5 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Frame = -1 Query: 490 RRRPGPNSLPSGPRPRPGAHAAWP----RCHAPSRSTPRALADLTDAYSTHAPSRTGATP 323 RRRP P PS R P P R +P R R+ A L+ + S+ + SR+ + P Sbjct: 312 RRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP 371 Query: 322 RR 317 ++ Sbjct: 372 KK 373
>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1424 Score = 31.6 bits (70), Expect = 1.5 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = -1 Query: 508 KPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTP 389 +P L +R PS P P PG+ P HAP STP Sbjct: 521 RPNLASQRTSSSTLFPSAP-PTPGSQPTTPGVHAPGSSTP 559
>ATOH1_HUMAN (Q92858) Atonal protein homolog 1 (Helix-loop-helix protein hATH-1)| Length = 354 Score = 31.2 bits (69), Expect = 2.0 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -1 Query: 529 APEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTH 350 A E K DH R+P P+ LP P P P A P +L D TD + Sbjct: 7 AEEWAEVKELGDHHRQPQPHHLPQ-PPPPPQPPATLQAREHPVYPPELSLLDSTDPRAWL 65 Query: 349 APSRTG-ATPRRTQIQLEA 296 AP+ G T R Q L + Sbjct: 66 APTLQGICTARAAQYLLHS 84
>VP40_HHV11 (P10210) Capsid protein P40 (Virion structural protein UL26)| [Contains: Capsid protein VP24 (EC 3.4.21.97) (Assemblin) (Protease); Capsid protein VP22A; UL26.5 protein; C-terminal peptide] Length = 635 Score = 31.2 bits (69), Expect = 2.0 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Frame = -1 Query: 526 PEQQRCKPAL---DHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYS 356 PE PAL + RP P+S P GP P +HA P +AP+ P + Sbjct: 519 PEPTTTHPALCPPEAVYRPPPHSAPYGPPQGPASHAPTPP-YAPAACPPGPPPPPCPSTQ 577 Query: 355 THAPSRT--GATPRRTQIQLEA 296 T AP T P T Q EA Sbjct: 578 TRAPLPTEPAFPPAATGSQPEA 599
>HPAB3_PSESM (Q2QCI9) Effector protein hopAB3 (Avirulence protein avrPtoB)| [Includes: E3 ubiquitin-protein ligase (EC 6.3.2.-)] Length = 579 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -1 Query: 451 RPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTGATPR 320 RP+ A AA P+ A R TP A DA ++H + G TP+ Sbjct: 89 RPQESAEAAAPQARAEERHTPEA-----DAAASHVRTEGGRTPQ 127
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 31.2 bits (69), Expect = 2.0 Identities = 26/60 (43%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Frame = -3 Query: 407 PIPLHST----CPRRSHRCLFHPRALA---DGRDAPPHADPARSVPGPPLHSLAAP-PRA 252 P+ HS+ CPRR R PRA + G APP PAR P PP AP PRA Sbjct: 88 PLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPP-PPPARPPPPPPPPPPPAPRPRA 146
>RHG26_HUMAN (Q9UNA1) Rho-GTPase-activating protein 26 (Oligophrenin-1-like| protein) (GTPase regulator associated with focal adhesion kinase) Length = 814 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/46 (34%), Positives = 18/46 (39%) Frame = -1 Query: 526 PEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTP 389 P P L + PNSLP P P +WP APS P Sbjct: 643 PNMNSSDPDLAVVKPTRPNSLPPNPSPTSPLSPSWPMFSAPSSPMP 688
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = -1 Query: 484 RPGPNSLPSGPRPRPGAHAAW-PRCHAPSRSTPR 386 RPGP P PRPGA A PR AP PR Sbjct: 188 RPGPRPHPGMMPPRPGASAGGPPRPQAPRPQAPR 221
>LOLB_XANCP (Q8PC65) Outer-membrane lipoprotein lolB precursor| Length = 218 Score = 30.8 bits (68), Expect = 2.6 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = +3 Query: 408 AWQRGHAAWA-PGRGRGPDGREFGPGRLRWSSAG 506 AW + H AW+ GR GR+ G GRL W G Sbjct: 52 AWLQAHPAWSFQGRVAISKGRDGGSGRLDWQQDG 85
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 30.8 bits (68), Expect = 2.6 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Frame = -1 Query: 541 PWNRAPEQQRCKPALDHRRRPG---PNSLPSGPRPR-PGAHAAWPRCHAPSRSTPR 386 P P+Q AL R PG P P GPRP P A A P +RS PR Sbjct: 285 PQGDRPQQTVRYSALAPRPAPGARGPGGPPRGPRPGVPAAAPATPEIQRATRSAPR 340
>M3K1_RAT (Q62925) Mitogen-activated protein kinase kinase kinase 1 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) Length = 1493 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = -1 Query: 505 PALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAP-----SRSTPRALADLTDAYSTHAPS 341 PA RR P P S PSG +P + + +P R TP A D +S ++P Sbjct: 233 PAPKGRRSPSPGSSPSGRSGKPESPGVRRKRVSPVPFQSGRITPPRRAPSPDGFSPYSPE 292 Query: 340 RT 335 T Sbjct: 293 ET 294
>M3K1_MOUSE (P53349) Mitogen-activated protein kinase kinase kinase 1 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) Length = 1493 Score = 30.8 bits (68), Expect = 2.6 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = -1 Query: 505 PALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAP-----SRSTPRALADLTDAYSTHAPS 341 PA RR P P S PSG +P + + +P R TP A D +S ++P Sbjct: 238 PAPKGRRSPSPGSSPSGRSVKPESPGVRRKRVSPVPFQSGRITPPRRAPSPDGFSPYSPE 297 Query: 340 RT 335 T Sbjct: 298 ET 299
>SEM6B_RAT (O70141) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)| Length = 887 Score = 30.8 bits (68), Expect = 2.6 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Frame = -1 Query: 505 PALDHRRRPGPNSLPSGP----------RPRPGAHAAWPRCHAPSRST 392 PA RRPGP+ P+ RPG H PR HAP+ ST Sbjct: 826 PATSSLRRPGPHGPPTAALRRTHTFNSGEARPGGHR--PRRHAPADST 871
>MYCB2_MOUSE (Q7TPH6) Probable ubiquitin ligase protein MYCBP2 (EC 6.3.2.-) (Myc| binding protein 2) (Protein associated with Myc) (Pam/highwire/rpm-1 protein) Length = 4711 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = -1 Query: 481 PGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALA--DLTDAYSTHAPSRTGATPRRTQI 308 PGP S S P+P+P PR S+PR+ + D + AP++T P R + Sbjct: 2847 PGPGSRSSSPKPKP---LPTPRSSPSGASSPRSSSPQDKNLPQKSTAPAKTKLDPPRERS 2903 Query: 307 QLEACLARPCT 275 + ++ P T Sbjct: 2904 KSDSYTLDPDT 2914
>Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase 5'region| Length = 238 Score = 30.4 bits (67), Expect = 3.3 Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Frame = -1 Query: 538 WNRA-PEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDA 362 W A P +RC R P P S + P PRP + C SR R L D Sbjct: 18 WRTARPAPRRCGSC----RPPPPGS--ASPSPRPRRASCATGCCGRSRPYARRLRRPADG 71 Query: 361 YSTHAPSRTGATPRRTQIQLEACLA 287 H P+ G T R L AC+A Sbjct: 72 ---HGPAGGGRTGRWYAYALAACVA 93
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 11/63 (17%) Frame = -3 Query: 413 PCPIPLHST-CPRRSHRCLFHP---RALADGRDAPPHADPARSVP-------GPPLHSLA 267 P P+P+HS+ P + P + L GR+ PP P + P GP SLA Sbjct: 190 PTPLPMHSSKAPAYNREKPLPPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLA 249 Query: 266 APP 258 PP Sbjct: 250 PPP 252
>CXA12_RAT (Q80XF7) Gap junction alpha-12 protein (Connexin-47) (Cx47)| Length = 440 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = -1 Query: 544 HPWNRAPEQQRCKPALDHRRRPGPNSLPSG--PRPRPGAHAAWP 419 H RA EQ+R + RRRPGP LP P P PG WP Sbjct: 100 HRLARASEQERRRAL---RRRPGPRRLPRAQLPPPPPG----WP 136
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 30.4 bits (67), Expect = 3.3 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Frame = -1 Query: 529 APEQQRCKP-ALDHRRRPGPNSLPSGPRPRPG-AHAAWPRCHA-PSRSTPRALADLTD 365 A Q R +P A+ R GP+ L R PG +H A P A + +PRA+A+LTD Sbjct: 789 AAAQARPRPVAVSRRPAEGPDPLGGWRRQPPGPSHTAAPAAAALEAYCSPRAVAELTD 846
>PROB_DEIRA (Q9RTD8) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 363 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +3 Query: 363 ASVRSARARGVERDGAWQRGHAAWAPGRGRGPDGREFGPGRLRWSSAGLQRCC 521 +S+ A R VE D ++RGH R PDG+E G G R+ + L+R C Sbjct: 289 SSLLPAGIRQVEGD--FERGHTV----RLLAPDGQELGRGLTRYRADDLRRVC 335
>LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 241 Score = 30.0 bits (66), Expect = 4.4 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -1 Query: 475 PNSLPSGPRPRPGAHAAWP 419 P P GP P PGAH A+P Sbjct: 53 PGQAPPGPYPGPGAHGAYP 71
>ATS17_HUMAN (Q8TE56) ADAMTS-17 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 17) (ADAM-TS 17) (ADAM-TS17) Length = 1095 Score = 30.0 bits (66), Expect = 4.4 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Frame = -1 Query: 541 PWNRAPEQQRCKP---ALDHRRRPGPNSLPSGPRPRPGAHA 428 PW P+ P A RRR P + P+ PR RPG A Sbjct: 40 PWRVRPDDVHLPPLPAAPGPRRRRRPRTPPAAPRARPGERA 80
>DNAE2_GLUOX (Q5HXU1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 901 Score = 30.0 bits (66), Expect = 4.4 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Frame = -1 Query: 448 PRPGAHAAWPRC-HAPSRS-----TPRALADLTDAYSTHAPSRTGATPRRTQIQLEACLA 287 P PG H AW C A SRS TP L T A+ TH+ S P I A Sbjct: 16 PAPGGHRAWIACSSALSRSAVLAGTPARLPVSTSAFLTHSFSVCAEQPILLAIDTIAVQR 75 Query: 286 RPCTAS 269 C+ S Sbjct: 76 DGCSPS 81
>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) (Docking protein CAIR-1) Length = 575 Score = 30.0 bits (66), Expect = 4.4 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 6/76 (7%) Frame = -1 Query: 541 PWNRAPEQQRCKPALDHRRRPGPNSLPSGPRPRPGAH------AAWPRCHAPSRSTPRAL 380 P + PE+ + A D SLPS R G+H + P H + + P A Sbjct: 163 PASHGPERSQSPAASDCSSSSSSASLPSSGRSSLGSHQLPRGYISIPVIHEQNVTRPAAQ 222 Query: 379 ADLTDAYSTHAPSRTG 332 A TH P++ G Sbjct: 223 PSFHQAQKTHYPAQQG 238
>PNRC1_HUMAN (Q12796) Proline-rich nuclear receptor coactivator 1 (Proline-rich| protein 2) (B4-2 protein) Length = 327 Score = 30.0 bits (66), Expect = 4.4 Identities = 23/76 (30%), Positives = 34/76 (44%) Frame = -1 Query: 535 NRAPEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYS 356 +R + Q+ +P+L+ R P PSG + PG AA A + T A DL Sbjct: 112 SRFHQYQQHRPSLEGGRSPATG--PSGAQEVPGPAAALAPSPAAAAGTEGASPDLAPL-- 167 Query: 355 THAPSRTGATPRRTQI 308 P+ G TP R ++ Sbjct: 168 --RPAAPGQTPLRKEV 181
>PKSC_STRCO (Q9S2C0) Serine/threonine protein kinase pksC (EC 2.7.11.1)| Length = 556 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%) Frame = -1 Query: 478 GPNSLPSGPRPRPGAH---AAWPRCHAPSRSTPRALADLTDAYSTHAPSRTGATP 323 GP P P P PG + P H+P+ P+ T A + +A + ATP Sbjct: 329 GPVQTPYQPTPSPGPNPYGTPAPAAHSPAYGYPQQAGYQTPAPAPYAQQQAAATP 383
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 24.3 bits (51), Expect(2) = 5.3 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = -3 Query: 323 PPHADPARSVPGPPLHSLAAPPR 255 PP PA+ PGP PPR Sbjct: 1064 PPQPYPAQRPPGPRYPPYTTPPR 1086 Score = 23.9 bits (50), Expect(2) = 5.3 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 4/54 (7%) Frame = -1 Query: 541 PWNRAPEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWP----RCHAPSRST 392 P+ P+ + P + P P P P P A P R H P R++ Sbjct: 980 PFKSNPQHRESWPGMGSGEAPTPLQPPEEVTPHPATPARRPPSPRRSHHPRRNS 1033
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/59 (28%), Positives = 23/59 (38%) Frame = -2 Query: 537 GTGHPSSSAASLHSTTEDARGRTPSRLDHDHALAPTQHGLAAMPHPAPLHVPSQISPMP 361 GTG P + +H T S +L PT + + A P A P +SP P Sbjct: 955 GTGAPEAPIPPVHPTHTTHTAIAQSSFSAQQSLFPTFYYIPATPLAASTPAPGALSPTP 1013
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 29.6 bits (65), Expect = 5.7 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = -1 Query: 490 RRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTP 389 R +PGP P G PRP H PR S P Sbjct: 1498 RPKPGPPQAPQGSSPRPPTHYDPPRASNAISSDP 1531
>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3| Length = 944 Score = 29.6 bits (65), Expect = 5.7 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 17/80 (21%) Frame = -1 Query: 496 DHRRRPGPNSLPSGPR-------------PRPGAHAAWPRCHAP--SRSTPRALADLTDA 362 D R+RP N P+ P PRP P +P +RS+P + +LT A Sbjct: 753 DERKRPVSNGRPARPPVTAGLVAARAAGDPRPPHDPTHPLAESPRPARSSPASSPELTPA 812 Query: 361 Y-STHAPSR-TGATPRRTQI 308 +T AP+ +GA+ R QI Sbjct: 813 LEATAAPAAPSGASTTRMQI 832
>BUR1_YARLI (Q6C842) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 706 Score = 24.6 bits (52), Expect(2) = 7.1 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = -3 Query: 356 HPRALADGRDAPPHADPARSVPGPPLHSLAAPPRAS 249 +PR RD P P GPP + PPR S Sbjct: 614 NPRDSDKSRDLGPPPGPPLPADGPPPPPSSNPPRPS 649 Score = 23.1 bits (48), Expect(2) = 7.1 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -1 Query: 475 PNSLPSGPRPRPG 437 P LP GP P PG Sbjct: 581 PRELPKGPPPAPG 593
>TAF12_DROME (P49905) Transcription initiation factor TFIID subunit 12| (Transcription initiation factor TFIID 28-alpha kDa/22 kDa subunits) (p28-alpha/p22) (TAFII30 alpha) Length = 196 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -2 Query: 495 TTEDARGRTPSRLDHDHALAPTQHGLAAMPHPAPLHVPSQISPM 364 TT D+ G L H+H + GL H P+ PSQ SPM Sbjct: 6 TTFDSNGVAEHHLHHNHNSTSSASGLL---HDPPMASPSQHSPM 46
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 29.3 bits (64), Expect = 7.5 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Frame = -1 Query: 529 APEQQRCKPALDHRRRPG--PNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYS 356 AP KPA R P + P+ P PRPG A PR AP+ P A + Sbjct: 81 APRPPAPKPAAAERPAAAERPAAAPAAPGPRPGPKPA-PR-PAPAAPAPAAPEFTAPPSA 138 Query: 355 THAPSRTGATPR 320 AP+ + PR Sbjct: 139 PAAPAAAASGPR 150
>Y105_ENCCU (Q8STH9) Hypothetical protein ECU01_0050/ECU01_1560/ECU07_0010| Length = 238 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -1 Query: 526 PEQQRCKPALDHRRRPGPNSLPSGPRPRPGAH-AAWPRCHAPSRS 395 PE + K + P P + P+ P PRP +H A P H RS Sbjct: 8 PETAKPKHSNQSEAGPAPLASPTAPMPRPASHLAPMPSDHPDFRS 52
>XKR7_RAT (Q5GH56) XK-related protein 7| Length = 580 Score = 29.3 bits (64), Expect = 7.5 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -3 Query: 365 CLFHPRALADGRDAPPHADPARSVP-GPPLHSLAAPPRA 252 CL HP G AP P P GPP ++ +PPR+ Sbjct: 437 CLLHPNGPMLGPQAPGCIFPEAPGPCGPPADAITSPPRS 475
>XKR7_MOUSE (Q5GH64) XK-related protein 7| Length = 580 Score = 29.3 bits (64), Expect = 7.5 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -3 Query: 365 CLFHPRALADGRDAPPHADPARSVP-GPPLHSLAAPPRA 252 CL HP G AP P P GPP ++ +PPR+ Sbjct: 437 CLLHPNGPMLGPQAPGCIFPEAPGPCGPPADAITSPPRS 475
>Y503_ENCCU (Q8ST70) Hypothetical protein ECU05_0030/ECU10_1870| Length = 489 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -1 Query: 526 PEQQRCKPALDHRRRPGPNSLPSGPRPRPGAH-AAWPRCHAPSRS 395 PE + K + P P + P+ P PRP +H A P H RS Sbjct: 8 PETAKPKHSNQSEAGPAPLASPTAPMPRPASHLAPMPSDHPDFRS 52
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 29.3 bits (64), Expect = 7.5 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 16/86 (18%) Frame = -1 Query: 490 RRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRS----------------TPRALADLTDAY 359 R +PGP P GP PRP R ++ S TPR A + Sbjct: 1498 RHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPGPMVRGVGGTPRDSAGV---- 1553 Query: 358 STHAPSRTGATPRRTQIQLEACLARP 281 S P R PR+ ++ E L P Sbjct: 1554 SPFPPKRRERPPRKPELLQEESLPPP 1579
>Y301_ENCCU (Q8SW85) Hypothetical protein ECU03_0010| Length = 276 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -1 Query: 526 PEQQRCKPALDHRRRPGPNSLPSGPRPRPGAH-AAWPRCHAPSRS 395 PE + K + P P + P+ P PRP +H A P H RS Sbjct: 8 PETAKPKHSNQSEAGPAPLASPTAPMPRPASHLAPMPSDHPDFRS 52
>TNR1A_BOVIN (O19131) Tumor necrosis factor receptor superfamily member 1A| precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55) Length = 471 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = -3 Query: 422 ASLPCPIPLHSTCPRRSHRCLFHPRALADGRDAPPHADPARSVPGPPLHSLAAPP 258 +S P IP + +C R + + P + APPH +PGPP + P Sbjct: 280 SSSPVSIPPYISCDRSNFGAVASPSS----ETAPPHLKAGPILPGPPASTHLCTP 330
>ROBO3_HUMAN (Q96MS0) Roundabout homolog 3 precursor (Roundabout-like protein 3)| Length = 1386 Score = 29.3 bits (64), Expect = 7.5 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = -1 Query: 514 RCKP-ALDHRRRPGPNSLPSGPRPRPGAHAAW 422 R KP AL +RR P LP P P P A+W Sbjct: 1250 RKKPKALPYRRENSPGDLPPPPLPPPEEEASW 1281
>TENS_CHICK (Q04205) Tensin| Length = 1744 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/58 (29%), Positives = 22/58 (37%) Frame = -1 Query: 505 PALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTG 332 P +H P P LP+GP G H + H TP TD P++ G Sbjct: 523 PMHNHAPGPAPARLPAGP----GRHVVPAQVHVNGAGTPLLAERETDILDDELPNQDG 576
>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor| (N-methyl D-aspartate receptor subtype 2D) (NR2D) (NMDAR2D) (EB11) Length = 1336 Score = 24.3 bits (51), Expect(2) = 8.6 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%) Frame = -1 Query: 481 PGPNSLPSGPRPRPGAHAAWPRCH----APSRSTPRALA 377 P P +GP PR A PR H S TP A A Sbjct: 1209 PPPPPWAAGPLPRRRARCGCPRSHPHRPRASHRTPAAAA 1247 Score = 23.1 bits (48), Expect(2) = 8.6 Identities = 10/23 (43%), Positives = 12/23 (52%) Frame = -3 Query: 320 PHADPARSVPGPPLHSLAAPPRA 252 P A PAR + GP H+ P A Sbjct: 1279 PRAAPARRLTGPSRHARRCPHAA 1301
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 26.2 bits (56), Expect(2) = 8.8 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -1 Query: 490 RRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRST----PRAL 380 R PGP + GPRP P A P+ P + + PR L Sbjct: 134 RSDPGPPTEIPGPRPSPLKRAPGPKPQVPPKPSYLQMPRVL 174 Score = 21.2 bits (43), Expect(2) = 8.8 Identities = 8/20 (40%), Positives = 10/20 (50%) Frame = -3 Query: 308 PARSVPGPPLHSLAAPPRAS 249 P +P PP L A PR + Sbjct: 176 PPEPIPPPPSRPLPADPRVA 195
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = -1 Query: 526 PEQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALA-DLTDAYSTH 350 P++ + KPA +P P +G PRP + P+ P ++ ++ L T Sbjct: 632 PKKLQTKPAPKPDTKPAPKGPQAGTGPRPTSAQPAPQPQQPQKTPEQSRRFSLNLGGITD 691 Query: 349 APSRTGATPRRT 314 AP TP+ T Sbjct: 692 APKPQPTTPQET 703
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -1 Query: 526 PEQQRCKPALDHRRRPGPNSLPSGPRPRP 440 P + P LD + PG SLP P+P P Sbjct: 7085 PAPAKASPPLDSKMGPGDISLPGRPKPGP 7113
>NETR_TRAPH (Q5G266) Neurotrypsin precursor (EC 3.4.21.-)| Length = 875 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -3 Query: 323 PPHADPARSVPGPPLHSLAAPPRA 252 P H P R+ P PPL + PPRA Sbjct: 48 PTHQRPPRTRPPPPLPRFSRPPRA 71
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 28.9 bits (63), Expect = 9.7 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Frame = -3 Query: 407 PIPLHSTCPRRSHRCLFHPRALAD--GRDAPPHADPARSVPGPPL-------HSLAAPP 258 P P T PRR+ R P ++ G PP A P+ S P P + + AAPP Sbjct: 778 PPPGPPTPPRRTSRAPIEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPP 836
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = -1 Query: 496 DHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSR 338 D RPG +GP P P A AA PR A S S+ A + P R Sbjct: 402 DEGVRPGAPLARAGPPPSPPAPAAAPRPSASSASSSAAASPAPAPEPARPPRR 454
>BUR1_ASHGO (Q75D46) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 753 Score = 28.9 bits (63), Expect = 9.7 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -1 Query: 523 EQQRCKPALDHRRRPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTP 389 +Q + HR P P SLP P+P+P A AP ++ P Sbjct: 474 QQYSSRGPQQHRTTPAPTSLP--PKPKPAPPGARYNREAPPQNKP 516
>LEM2_CAEEL (Q9XTB5) LEM protein 2 (Ce-MAN1) (MAN1 homolog)| Length = 500 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -1 Query: 397 STPRALADLTDAYSTHAPSRTGATPRRTQI 308 S P + D T ++ST R GATP R I Sbjct: 197 SVPGLITDFTPSFSTFGSDRPGATPPRKSI 226
>SELO_HUMAN (Q9BVL4) Selenoprotein O| Length = 669 Score = 28.9 bits (63), Expect = 9.7 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = -1 Query: 481 PGPNSLPSGPRPRPGA 434 PGP PS PRP PGA Sbjct: 65 PGPEGAPSAPRPVPGA 80
>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor| Length = 1470 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -1 Query: 508 KPALDHRRRPGPNSLPSGPRPRPG 437 +P L HRR P+ LP P P PG Sbjct: 1302 QPVLPHRREGMPDDLPPPPDPPPG 1325
>JUN_PIG (P56432) Transcription factor AP-1 (Activator protein 1) (AP1)| (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17 oncogene homolog) Length = 331 Score = 28.9 bits (63), Expect = 9.7 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -3 Query: 398 LHSTCPRRSHRCLFHPRALADGRDAPPHADPARSVPGPPLHSLAAPPR 255 LHS P ++ F+P AL+ G AP + + P P PP+ Sbjct: 163 LHSEPPVYANLSNFNPGALSSGGGAPSYGAAGLAFPAQPQQQQQQPPQ 210
>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2| Length = 902 Score = 28.9 bits (63), Expect = 9.7 Identities = 17/44 (38%), Positives = 19/44 (43%) Frame = -1 Query: 463 PSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTG 332 P+ P PRPGA AA P T A T A AP+ G Sbjct: 189 PAAPAPRPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPAGRG 232
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 28.9 bits (63), Expect = 9.7 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Frame = -1 Query: 502 ALDHRRRPGPNSLPSGPRPRPGAHAAWPRC----HAPSRSTPRALADLTDAYSTHAPSRT 335 ALD+ + G N + P +PG A P AP+R P A A P Sbjct: 91 ALDNAIKAGGNGEAAAPPAQPGGTATTPAAQATPEAPARPGPAAARPSAPAPGQPKPPAP 150 Query: 334 GATPR 320 G PR Sbjct: 151 GQPPR 155
>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)| Length = 939 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -1 Query: 466 LPSGPRPRP--GAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTGATPRRTQIQLEAC 293 +PS P P+P A A+ P +P ++ ++ L ++ P+RT +P R+ I A Sbjct: 471 IPSRPAPKPPSSASASAPIIKSPVMNSAANVSPLKQTHAPTTPNRT--SPNRSSISRNAT 528 Query: 292 LAR 284 L + Sbjct: 529 LKK 531
>SEM6B_MOUSE (O54951) Semaphorin-6B precursor (Semaphorin VIB) (Sema VIB)| (Semaphorin N) (Sema N) Length = 886 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 10/48 (20%) Frame = -1 Query: 505 PALDHRRRPGPNSLPSGP----------RPRPGAHAAWPRCHAPSRST 392 PA RRPGP+ P+ RPG H PR H P+ ST Sbjct: 825 PATSSLRRPGPHGPPTAALRRTHTFNSGEARPGGHR--PRRHPPADST 870
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 26.2 bits (56), Expect(2) = 9.8 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = -3 Query: 341 ADGRDAPPHADPARSVPGPP 282 A G D PP AD PGPP Sbjct: 247 APGPDGPPGADGQSGPPGPP 266 Score = 21.2 bits (43), Expect(2) = 9.8 Identities = 13/51 (25%), Positives = 20/51 (39%) Frame = -1 Query: 484 RPGPNSLPSGPRPRPGAHAAWPRCHAPSRSTPRALADLTDAYSTHAPSRTG 332 RPG ++ P P PR G AP + +++ + AP G Sbjct: 170 RPGTDAAPGSPGPR-GPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPG 219 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,923,081 Number of Sequences: 219361 Number of extensions: 1367739 Number of successful extensions: 7627 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 6123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7550 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)