ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13e08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 502 bits (253), Expect = e-139 Identities = 358/393 (91%) Strand = Plus / Minus Query: 164 cggcggcggcgcgcgccgcacggtgacctacatgccccggccgggcgacggcaccccgcg 223 ||||| ||||||||||||||||||||||||||||||| |||| || ||||| | |||||| Sbjct: 107790 cggcgccggcgcgcgccgcacggtgacctacatgcccaggccaggggacgggaacccgcg 107731 Query: 224 ccccgtcacgctcatcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagca 283 | |||| ||||| |||||||| ||||| |||||||| ||||| || || |||||| |||| Sbjct: 107730 cgccgtgacgctgatcccgggggacgggatcgggccgctcgtgacgggggccgtgcagca 107671 Query: 284 ggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccacggcgacat 343 ||| ||||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||| Sbjct: 107670 ggtgatggaggtgatgcacgcgccggtctacttcgagacctacgaggtccgcggcgacat 107611 Query: 344 gcccgccgtgccgcccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaaggg 403 |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107610 gcccaccgtgccgcccgccgtcatcgagtccatccgccgcaacaaggtgtgcctcaaggg 107551 Query: 404 cggcctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaagga 463 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 107550 cggcctcgccacccccgtcggcggcggggtctcctccctcaacatgcagctccgcaagga 107491 Query: 464 gctcgacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggca 523 ||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 107490 gctcgacctctacgcctcgctcgtcaactgctccaacttccccggcctccccaccaggca 107431 Query: 524 caagaacgtcgacatcgtcgtcatcagggagaa 556 | || |||||||||||||||||||||||||||| Sbjct: 107430 ccaggacgtcgacatcgtcgtcatcagggagaa 107398 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 93 ccacccatggcgcggcgatccgcaccgctcctccgccgc 131 |||||||||| |||||||||||| || |||||||||||| Sbjct: 107866 ccacccatgg-gcggcgatccgcccccctcctccgccgc 107829
>dbj|AB189168.1| Oryza sativa (japonica cultivar-group) OsIDHc;1 mRNA for NAD-dependent isocitrate dehydrogenase c;1, complete cds Length = 1290 Score = 502 bits (253), Expect = e-139 Identities = 358/393 (91%) Strand = Plus / Plus Query: 164 cggcggcggcgcgcgccgcacggtgacctacatgccccggccgggcgacggcaccccgcg 223 ||||| ||||||||||||||||||||||||||||||| |||| || ||||| | |||||| Sbjct: 101 cggcgccggcgcgcgccgcacggtgacctacatgcccaggccaggggacgggaacccgcg 160 Query: 224 ccccgtcacgctcatcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagca 283 | |||| ||||| |||||||| ||||| |||||||| ||||| || || |||||| |||| Sbjct: 161 cgccgtgacgctgatcccgggggacgggatcgggccgctcgtgacgggggccgtgcagca 220 Query: 284 ggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccacggcgacat 343 ||| ||||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||| Sbjct: 221 ggtgatggaggtgatgcacgcgccggtctacttcgagacctacgaggtccgcggcgacat 280 Query: 344 gcccgccgtgccgcccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaaggg 403 |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 281 gcccaccgtgccgcccgccgtcatcgagtccatccgccgcaacaaggtgtgcctcaaggg 340 Query: 404 cggcctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaagga 463 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 341 cggcctcgccacccccgtcggcggcggggtctcctccctcaacatgcagctccgcaagga 400 Query: 464 gctcgacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggca 523 ||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 401 gctcgacctctacgcctcgctcgtcaactgctccaacttccccggcctccccaccaggca 460 Query: 524 caagaacgtcgacatcgtcgtcatcagggagaa 556 | || |||||||||||||||||||||||||||| Sbjct: 461 ccaggacgtcgacatcgtcgtcatcagggagaa 493 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 93 ccacccatggcgcggcgatccgcaccgctcctccgccgc 131 ||||||||||||||||||||||| || |||||||||||| Sbjct: 24 ccacccatggcgcggcgatccgcccccctcctccgccgc 62
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 502 bits (253), Expect = e-139 Identities = 358/393 (91%) Strand = Plus / Minus Query: 164 cggcggcggcgcgcgccgcacggtgacctacatgccccggccgggcgacggcaccccgcg 223 ||||| ||||||||||||||||||||||||||||||| |||| || ||||| | |||||| Sbjct: 23942817 cggcgccggcgcgcgccgcacggtgacctacatgcccaggccaggggacgggaacccgcg 23942758 Query: 224 ccccgtcacgctcatcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagca 283 | |||| ||||| |||||||| ||||| |||||||| ||||| || || |||||| |||| Sbjct: 23942757 cgccgtgacgctgatcccgggggacgggatcgggccgctcgtgacgggggccgtgcagca 23942698 Query: 284 ggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccacggcgacat 343 ||| ||||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||| Sbjct: 23942697 ggtgatggaggtgatgcacgcgccggtctacttcgagacctacgaggtccgcggcgacat 23942638 Query: 344 gcccgccgtgccgcccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaaggg 403 |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23942637 gcccaccgtgccgcccgccgtcatcgagtccatccgccgcaacaaggtgtgcctcaaggg 23942578 Query: 404 cggcctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaagga 463 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 23942577 cggcctcgccacccccgtcggcggcggggtctcctccctcaacatgcagctccgcaagga 23942518 Query: 464 gctcgacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggca 523 ||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 23942517 gctcgacctctacgcctcgctcgtcaactgctccaacttccccggcctccccaccaggca 23942458 Query: 524 caagaacgtcgacatcgtcgtcatcagggagaa 556 | || |||||||||||||||||||||||||||| Sbjct: 23942457 ccaggacgtcgacatcgtcgtcatcagggagaa 23942425 Score = 46.1 bits (23), Expect = 0.12 Identities = 36/39 (92%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 93 ccacccatggcgcggcgatccgcaccgctcctccgccgc 131 |||||||||| |||||||||||| || |||||||||||| Sbjct: 23942893 ccacccatgg-gcggcgatccgcccccctcctccgccgc 23942856 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 gcgatccgcaccgctcctccgccgcc 132 |||||||||||||| ||||||||||| Sbjct: 22156687 gcgatccgcaccgcacctccgccgcc 22156712
>dbj|AK099258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J19, full insert sequence Length = 1508 Score = 502 bits (253), Expect = e-139 Identities = 358/393 (91%) Strand = Plus / Plus Query: 164 cggcggcggcgcgcgccgcacggtgacctacatgccccggccgggcgacggcaccccgcg 223 ||||| ||||||||||||||||||||||||||||||| |||| || ||||| | |||||| Sbjct: 183 cggcgccggcgcgcgccgcacggtgacctacatgcccaggccaggggacgggaacccgcg 242 Query: 224 ccccgtcacgctcatcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagca 283 | |||| ||||| |||||||| ||||| |||||||| ||||| || || |||||| |||| Sbjct: 243 cgccgtgacgctgatcccgggggacgggatcgggccgctcgtgacgggggccgtgcagca 302 Query: 284 ggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccacggcgacat 343 ||| ||||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||| Sbjct: 303 ggtgatggaggtgatgcacgcgccggtctacttcgagacctacgaggtccgcggcgacat 362 Query: 344 gcccgccgtgccgcccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaaggg 403 |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 363 gcccaccgtgccgcccgccgtcatcgagtccatccgccgcaacaaggtgtgcctcaaggg 422 Query: 404 cggcctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaagga 463 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 423 cggcctcgccacccccgtcggcggcggggtctcctccctcaacatgcagctccgcaagga 482 Query: 464 gctcgacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggca 523 ||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 483 gctcgacctctacgcctcgctcgtcaactgctccaacttccccggcctccccaccaggca 542 Query: 524 caagaacgtcgacatcgtcgtcatcagggagaa 556 | || |||||||||||||||||||||||||||| Sbjct: 543 ccaggacgtcgacatcgtcgtcatcagggagaa 575 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 93 ccacccatggcgcggcgatccgcaccgctcctccgccgc 131 ||||||||||||||||||||||| || |||||||||||| Sbjct: 106 ccacccatggcgcggcgatccgcccccctcctccgccgc 144
>dbj|AK072524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127J10, full insert sequence Length = 1598 Score = 502 bits (253), Expect = e-139 Identities = 358/393 (91%) Strand = Plus / Plus Query: 164 cggcggcggcgcgcgccgcacggtgacctacatgccccggccgggcgacggcaccccgcg 223 ||||| ||||||||||||||||||||||||||||||| |||| || ||||| | |||||| Sbjct: 199 cggcgccggcgcgcgccgcacggtgacctacatgcccaggccaggggacgggaacccgcg 258 Query: 224 ccccgtcacgctcatcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagca 283 | |||| ||||| |||||||| ||||| |||||||| ||||| || || |||||| |||| Sbjct: 259 cgccgtgacgctgatcccgggggacgggatcgggccgctcgtgacgggggccgtgcagca 318 Query: 284 ggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccacggcgacat 343 ||| ||||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||| Sbjct: 319 ggtgatggaggtgatgcacgcgccggtctacttcgagacctacgaggtccgcggcgacat 378 Query: 344 gcccgccgtgccgcccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaaggg 403 |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 379 gcccaccgtgccgcccgccgtcatcgagtccatccgccgcaacaaggtgtgcctcaaggg 438 Query: 404 cggcctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaagga 463 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 439 cggcctcgccacccccgtcggcggcggggtctcctccctcaacatgcagctccgcaagga 498 Query: 464 gctcgacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggca 523 ||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 499 gctcgacctctacgcctcgctcgtcaactgctccaacttccccggcctccccaccaggca 558 Query: 524 caagaacgtcgacatcgtcgtcatcagggagaa 556 | || |||||||||||||||||||||||||||| Sbjct: 559 ccaggacgtcgacatcgtcgtcatcagggagaa 591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 93 ccacccatggcgcggcgatccgcaccgctcctccgccgc 131 ||||||||||||||||||||||| || |||||||||||| Sbjct: 122 ccacccatggcgcggcgatccgcccccctcctccgccgc 160
>dbj|AK072240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001I19, full insert sequence Length = 1508 Score = 502 bits (253), Expect = e-139 Identities = 358/393 (91%) Strand = Plus / Plus Query: 164 cggcggcggcgcgcgccgcacggtgacctacatgccccggccgggcgacggcaccccgcg 223 ||||| ||||||||||||||||||||||||||||||| |||| || ||||| | |||||| Sbjct: 183 cggcgccggcgcgcgccgcacggtgacctacatgcccaggccaggggacgggaacccgcg 242 Query: 224 ccccgtcacgctcatcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagca 283 | |||| ||||| |||||||| ||||| |||||||| ||||| || || |||||| |||| Sbjct: 243 cgccgtgacgctgatcccgggggacgggatcgggccgctcgtgacgggggccgtgcagca 302 Query: 284 ggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccacggcgacat 343 ||| ||||||| ||||||||||| |||||||||||||| ||||| |||| ||||||||| Sbjct: 303 ggtgatggaggtgatgcacgcgccggtctacttcgagacctacgaggtccgcggcgacat 362 Query: 344 gcccgccgtgccgcccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaaggg 403 |||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 363 gcccaccgtgccgcccgccgtcatcgagtccatccgccgcaacaaggtgtgcctcaaggg 422 Query: 404 cggcctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaagga 463 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 423 cggcctcgccacccccgtcggcggcggggtctcctccctcaacatgcagctccgcaagga 482 Query: 464 gctcgacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggca 523 ||||||||||| |||||| |||||||||||| ||||| |||||||||| ||||||||||| Sbjct: 483 gctcgacctctacgcctcgctcgtcaactgctccaacttccccggcctccccaccaggca 542 Query: 524 caagaacgtcgacatcgtcgtcatcagggagaa 556 | || |||||||||||||||||||||||||||| Sbjct: 543 ccaggacgtcgacatcgtcgtcatcagggagaa 575 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 93 ccacccatggcgcggcgatccgcaccgctcctccgccgc 131 ||||||||||||||||||||||| || |||||||||||| Sbjct: 106 ccacccatggcgcggcgatccgcccccctcctccgccgc 144
>ref|XM_466525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1476 Score = 484 bits (244), Expect = e-133 Identities = 346/380 (91%) Strand = Plus / Plus Query: 177 cgccgcacggtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctc 236 |||||||| || ||||||||||| |||||||| |||||| |||||||| ||||||||||| Sbjct: 131 cgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctc 190 Query: 237 atcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggcc 296 |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 191 atcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggcc 250 Query: 297 atgcacgcgcccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccg 356 ||||||||||| |||||||||||| | ||||| |||| |||||||||||| | || || Sbjct: 251 atgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccc 310 Query: 357 cccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 416 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 cccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 370 Query: 417 cccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttc 476 || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 371 ccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctac 430 Query: 477 gcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgac 536 |||||||||||||||||| |||| |||| || ||||||||||||||| | ||||||||| Sbjct: 431 gcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgac 490 Query: 537 atcgtcgtcatcagggagaa 556 || ||||||||||||||||| Sbjct: 491 attgtcgtcatcagggagaa 510 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 97 ccatggcgcggcgatccgcaccgctcctcc 126 ||||||||||||||||||| || ||||||| Sbjct: 30 ccatggcgcggcgatccgcccctctcctcc 59
>dbj|AB189169.1| Oryza sativa (japonica cultivar-group) OsIDHc;2 mRNA for NAD-dependent isocitrate dehydrogenase c;2, complete cds Length = 1516 Score = 484 bits (244), Expect = e-133 Identities = 346/380 (91%) Strand = Plus / Plus Query: 177 cgccgcacggtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctc 236 |||||||| || ||||||||||| |||||||| |||||| |||||||| ||||||||||| Sbjct: 134 cgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctc 193 Query: 237 atcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggcc 296 |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 194 atcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggcc 253 Query: 297 atgcacgcgcccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccg 356 ||||||||||| |||||||||||| | ||||| |||| |||||||||||| | || || Sbjct: 254 atgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccc 313 Query: 357 cccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 416 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 cccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 373 Query: 417 cccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttc 476 || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 374 ccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctac 433 Query: 477 gcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgac 536 |||||||||||||||||| |||| |||| || ||||||||||||||| | ||||||||| Sbjct: 434 gcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgac 493 Query: 537 atcgtcgtcatcagggagaa 556 || ||||||||||||||||| Sbjct: 494 attgtcgtcatcagggagaa 513 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 97 ccatggcgcggcgatccgcaccgctcctcc 126 ||||||||||||||||||| || ||||||| Sbjct: 33 ccatggcgcggcgatccgcccctctcctcc 62
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 484 bits (244), Expect = e-133 Identities = 346/380 (91%) Strand = Plus / Minus Query: 177 cgccgcacggtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctc 236 |||||||| || ||||||||||| |||||||| |||||| |||||||| ||||||||||| Sbjct: 23129575 cgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctc 23129516 Query: 237 atcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggcc 296 |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 23129515 atcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggcc 23129456 Query: 297 atgcacgcgcccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccg 356 ||||||||||| |||||||||||| | ||||| |||| |||||||||||| | || || Sbjct: 23129455 atgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccc 23129396 Query: 357 cccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 416 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23129395 cccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 23129336 Query: 417 cccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttc 476 || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 23129335 ccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctac 23129276 Query: 477 gcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgac 536 |||||||||||||||||| |||| |||| || ||||||||||||||| | ||||||||| Sbjct: 23129275 gcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgac 23129216 Query: 537 atcgtcgtcatcagggagaa 556 || ||||||||||||||||| Sbjct: 23129215 attgtcgtcatcagggagaa 23129196 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 97 ccatggcgcggcgatccgcaccgctcctcc 126 ||||||||||||||||||| || ||||||| Sbjct: 23129676 ccatggcgcggcgatccgcccctctcctcc 23129647
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 484 bits (244), Expect = e-133 Identities = 346/380 (91%) Strand = Plus / Minus Query: 177 cgccgcacggtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctc 236 |||||||| || ||||||||||| |||||||| |||||| |||||||| ||||||||||| Sbjct: 96613 cgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctc 96554 Query: 237 atcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggcc 296 |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 96553 atcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggcc 96494 Query: 297 atgcacgcgcccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccg 356 ||||||||||| |||||||||||| | ||||| |||| |||||||||||| | || || Sbjct: 96493 atgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccc 96434 Query: 357 cccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 416 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96433 cccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 96374 Query: 417 cccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttc 476 || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 96373 ccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctac 96314 Query: 477 gcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgac 536 |||||||||||||||||| |||| |||| || ||||||||||||||| | ||||||||| Sbjct: 96313 gcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgac 96254 Query: 537 atcgtcgtcatcagggagaa 556 || ||||||||||||||||| Sbjct: 96253 attgtcgtcatcagggagaa 96234 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 97 ccatggcgcggcgatccgcaccgctcctcc 126 ||||||||||||||||||| || ||||||| Sbjct: 96714 ccatggcgcggcgatccgcccctctcctcc 96685
>dbj|AK073096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005G21, full insert sequence Length = 1476 Score = 484 bits (244), Expect = e-133 Identities = 346/380 (91%) Strand = Plus / Plus Query: 177 cgccgcacggtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctc 236 |||||||| || ||||||||||| |||||||| |||||| |||||||| ||||||||||| Sbjct: 131 cgccgcaccgtcacctacatgccgcggccgggggacggcgccccgcgcgccgtcacgctc 190 Query: 237 atcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggcc 296 |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| Sbjct: 191 atcccgggcgacggcatcgggcccctcgtcaccggcgccgtgcggcaggtgatggaggcc 250 Query: 297 atgcacgcgcccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccg 356 ||||||||||| |||||||||||| | ||||| |||| |||||||||||| | || || Sbjct: 251 atgcacgcgccggtctacttcgagtcctacgaggtccgcggcgacatgccgacggttccc 310 Query: 357 cccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 416 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 cccgaggtcatcgactccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 370 Query: 417 cccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttc 476 || ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 371 ccagtcggcgggggtgtctcctccctcaacgtgcagctccgcaaggagctcgacctctac 430 Query: 477 gcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgac 536 |||||||||||||||||| |||| |||| || ||||||||||||||| | ||||||||| Sbjct: 431 gcctccctcgtcaactgcttcaacctcccggggctgcccaccaggcacgacaacgtcgac 490 Query: 537 atcgtcgtcatcagggagaa 556 || ||||||||||||||||| Sbjct: 491 attgtcgtcatcagggagaa 510 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 97 ccatggcgcggcgatccgcaccgctcctcc 126 ||||||||||||||||||| || ||||||| Sbjct: 30 ccatggcgcggcgatccgcccctctcctcc 59
>ref|XM_472893.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1020 Score = 448 bits (226), Expect = e-123 Identities = 328/362 (90%) Strand = Plus / Plus Query: 195 atgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggcgacggcatc 254 |||||| |||| || ||||| | ||||||| |||| ||||| |||||||| ||||| ||| Sbjct: 1 atgcccaggccaggggacgggaacccgcgcgccgtgacgctgatcccgggggacgggatc 60 Query: 255 gggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgcgcccgtctac 314 ||||| ||||| || || |||||| ||||||| ||||||| ||||||||||| |||||| Sbjct: 61 gggccgctcgtgacgggggccgtgcagcaggtgatggaggtgatgcacgcgccggtctac 120 Query: 315 ttcgagacatacgacgtccacggcgacatgcccgccgtgccgcccgcggtcatcgagtcc 374 |||||||| ||||| |||| ||||||||||||| ||||||||||||| |||||||||||| Sbjct: 121 ttcgagacctacgaggtccgcggcgacatgcccaccgtgccgcccgccgtcatcgagtcc 180 Query: 375 atccgccgcaacaaggtctgcctcaagggcggcctcgccacccccgtcggcgggggcgtc 434 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 181 atccgccgcaacaaggtgtgcctcaagggcggcctcgccacccccgtcggcggcggggtc 240 Query: 435 tcctccctcaacatgcagctccgcaaggagctcgacctcttcgcctccctcgtcaactgc 494 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 241 tcctccctcaacatgcagctccgcaaggagctcgacctctacgcctcgctcgtcaactgc 300 Query: 495 gccaacgtccccggcctgcccaccaggcacaagaacgtcgacatcgtcgtcatcagggag 554 ||||| |||||||||| |||||||||||| || |||||||||||||||||||||||||| Sbjct: 301 tccaacttccccggcctccccaccaggcaccaggacgtcgacatcgtcgtcatcagggag 360 Query: 555 aa 556 || Sbjct: 361 aa 362
>gb|BT018657.1| Zea mays clone EL01N0508D03.d mRNA sequence Length = 1512 Score = 420 bits (212), Expect = e-114 Identities = 338/380 (88%) Strand = Plus / Plus Query: 177 cgccgcacggtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctc 236 |||||||| || ||||||||||| || ||||| |||||| |||||||| |||||| ||| Sbjct: 173 cgccgcaccgtcacctacatgcctcgcccgggggacggcgccccgcgcggcgtcactctc 232 Query: 237 atcccgggcgacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggcc 296 |||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| Sbjct: 233 atcccgggcgacggcatcgggcccctcgtcacgggcgccgtgcggcaggtgatggaggcg 292 Query: 297 atgcacgcgcccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccg 356 ||||||||||| ||||||||||||||||| | |||| ||||||||||||| | || || Sbjct: 293 atgcacgcgccggtctacttcgagacatattaggtccgcggcgacatgcccacggtcccc 352 Query: 357 cccgcggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 416 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 gccgaggtcatcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacc 412 Query: 417 cccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttc 476 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 413 cccgtcggcggcggtgtctcctccctcaacatgcagctccggaaggagctcgacctctac 472 Query: 477 gcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgac 536 ||| | |||||||||||| |||| |||| || ||||| ||||||||| | ||||| ||| Sbjct: 473 gccgcgctcgtcaactgcttcaacctccctggtctgcctaccaggcacgacaacgtggac 532 Query: 537 atcgtcgtcatcagggagaa 556 ||||||||||| ||||||| Sbjct: 533 atcgtcgtcattggggagaa 552
>gb|AY775790.1| Zea mays NAD-dependent isocitrate dehydrogenase mRNA, partial cds Length = 1117 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 408 ctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctc 467 |||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 1 ctcgccacgcccgtcggcggcggggtctcctccctcaacatgcagctgcgcaaggagctc 60 Query: 468 gacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaag 527 || |||| |||||| |||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 61 gatctctacgcctcactcgtccactgctccaacctccccggcctgcccaccaggcacgag 120 Query: 528 aacgtcgacatcgtcgtcatcagggagaa 556 |||||||||||||| ||||||||||| Sbjct: 121 ggtgtcgacatcgtcgtaatcagggagaa 149
>gb|AY104383.1| Zea mays PCO129762 mRNA sequence Length = 827 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 408 ctcgccacccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctc 467 |||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 1 ctcgccacgcccgtcggcggcggggtctcctccctcaacatgcagctgcgcaaggagctc 60 Query: 468 gacctcttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaag 527 || |||| |||||| |||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 61 gatctctacgcctcactcgtccactgctccaacctccccggcctgcccaccaggcacgag 120 Query: 528 aacgtcgacatcgtcgtcatcagggagaa 556 |||||||||||||| ||||||||||| Sbjct: 121 ggtgtcgacatcgtcgtaatcagggagaa 149
>gb|AY216772.1| Brassica napus cultivar Shan 2B NAD-dependent isocitrate dehydrogenase beta subunit mRNA, complete cds Length = 1399 Score = 117 bits (59), Expect = 4e-23 Identities = 293/371 (78%) Strand = Plus / Plus Query: 186 gtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggc 245 ||||||||||||||||| || |||||||| |||||||| | |||||||||||||| || Sbjct: 144 gtgacctacatgccccgacccggcgacggatccccgcgcgcagtcacgctcatccccggt 203 Query: 246 gacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgcg 305 || || ||||| || ||||| || ||||||||||||||| ||||| || ||||||||| Sbjct: 204 gatgggatcggccctctcgtgaccaacgccgtggagcaggtgatggaagcgatgcacgcg 263 Query: 306 cccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccgcccgcggtc 365 || |||||||||||| ||||||||||| || || ||| | ||||||| | | ||| Sbjct: 264 ccgatctacttcgagaagtacgacgtccagggggagatgagccgcgtgccggcggaggtg 323 Query: 366 atcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacccccgtcggc 425 || ||||| || || |||||||| ||| | || ||||| ||| |||||||| ||| Sbjct: 324 atggagtcgatacggaagaacaaggtgtgcttgaaaggcgggctcaagacccccgtgggc 383 Query: 426 gggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttcgcctccctc 485 || ||||| ||| || ||| ||||||| | |||||||| |||||||| ||||| || Sbjct: 384 ggcggcgtgagctcgctgaacgtgcagctgaggaaggagcttgacctctttgcctcgctt 443 Query: 486 gtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgacatcgtcgtc 545 ||||||||| |||| | ||||| ||||||||||||| |||| || || ||||| || Sbjct: 444 gtcaactgcttcaacttgcccgggttgcccaccaggcatgagaatgttgatatcgttgtg 503 Query: 546 atcagggagaa 556 || |||||||| Sbjct: 504 attagggagaa 514
>gb|AY216771.1| Brassica napus cultivar Shan 2A NAD-dependent isocitrate dehydrogenase beta subunit mRNA, complete cds Length = 1399 Score = 117 bits (59), Expect = 4e-23 Identities = 293/371 (78%) Strand = Plus / Plus Query: 186 gtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggc 245 ||||||||||||||||| || |||||||| |||||||| | |||||||||||||| || Sbjct: 144 gtgacctacatgccccgacccggcgacggatccccgcgcgcagtcacgctcatccccggt 203 Query: 246 gacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgcg 305 || || ||||| || ||||| || ||||||||||||||| ||||| || ||||||||| Sbjct: 204 gatgggatcggccctctcgtgaccaacgccgtggagcaggtgatggaagcgatgcacgcg 263 Query: 306 cccgtctacttcgagacatacgacgtccacggcgacatgcccgccgtgccgcccgcggtc 365 || |||||||||||| ||||||||||| || || ||| | ||||||| | | ||| Sbjct: 264 ccgatctacttcgagaagtacgacgtccagggggagatgagccgcgtgccggcggaggtg 323 Query: 366 atcgagtccatccgccgcaacaaggtctgcctcaagggcggcctcgccacccccgtcggc 425 || ||||| || || |||||||| ||| | || ||||| ||| |||||||| ||| Sbjct: 324 atggagtcgatacggaagaacaaggtgtgcttgaaaggcgggctcaagacccccgtgggc 383 Query: 426 gggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctcttcgcctccctc 485 || ||||| ||| || ||| ||||||| | |||||||| |||||||| ||||| || Sbjct: 384 ggcggcgtgagctcgctgaacgtgcagctgaggaaggagcttgacctctttgcctcgctt 443 Query: 486 gtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtcgacatcgtcgtc 545 ||||||||| |||| | ||||| ||||||||||||| |||| || || ||||| || Sbjct: 444 gtcaactgcttcaacttgcccgggttgcccaccaggcatgagaatgttgatatcgttgtg 503 Query: 546 atcagggagaa 556 || |||||||| Sbjct: 504 attagggagaa 514
>emb|Y14431.1|NTY14431 Nicotiana tabacum mRNA for NAD-dependent isocitrate dehydrogenase, clone pnadidh-c Length = 1448 Score = 111 bits (56), Expect = 2e-21 Identities = 131/156 (83%) Strand = Plus / Plus Query: 189 acctacatgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggcgac 248 |||||||||||||| || || || ||||| || ||| ||||||| |||||||| || ||| Sbjct: 160 acctacatgccccgacccggtgatggcacaccacgcgccgtcactctcatccctggtgac 219 Query: 249 ggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgcgccc 308 || |||||||| |||||||| ||||| || || || |||||||| || |||||||| || Sbjct: 220 gggatcgggccgctcgtcaccggcgctgtcgaacaagtcatggacgcgatgcacgctcct 279 Query: 309 gtctacttcgagacatacgacgtccacggcgacatg 344 || ||||||||| ||||||||| |||||||||||| Sbjct: 280 gtgtacttcgagcgatacgacgttcacggcgacatg 315
>gb|AY216773.1| Brassica napus cultivar Keng C1 NAD-dependent isocitrate dehydrogenase beta subunit mRNA, complete cds Length = 1399 Score = 91.7 bits (46), Expect = 2e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 186 gtgacctacatgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggc 245 ||||||||||||||||| || |||||||| |||||||| | || || |||||||| ||| Sbjct: 144 gtgacctacatgccccgacccggcgacggatccccgcgcgcagtgaccctcatccccggc 203 Query: 246 gacggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgcg 305 || || ||||| || || || || ||||||||||||||| ||||| || ||||||||| Sbjct: 204 gatgggatcggccctctggtgacgaacgccgtggagcaggtgatggaagcgatgcacgcg 263 Query: 306 cccgtctacttcgagacatacgacgt 331 || |||||||||||| |||||||| Sbjct: 264 ccgatctacttcgagaagtacgacgt 289 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 414 acccccgtcggcgggggcgtctcctccctcaacatgcagctccgcaaggagctcgacctc 473 |||||||| ||||| ||||| ||| |||||| ||||||| | |||||||| |||||| Sbjct: 372 acccccgtgggcggcggcgtgagctcgctcaacgtgcagctgaggaaggagcttgacctc 431 Query: 474 ttcgcctccctcgtcaactgcgccaacgtccccggcctgcccaccaggcacaagaacgtc 533 || ||||| || ||||||||| |||| | ||||| ||||||||||||| |||| || Sbjct: 432 tttgcctcgcttgtcaactgcttcaacttgcccgggttgcccaccaggcatgagaatgtt 491 Query: 534 gacatcgtcgtcatcagggagaa 556 || ||||| || || |||||||| Sbjct: 492 gatatcgttgtgattagggagaa 514
>gb|AC152421.8| Medicago truncatula clone mth2-7h20, complete sequence Length = 127540 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Plus Query: 189 acctacatgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggcgac 248 |||||||||| ||| || |||||||| || || || ||||| || || ||||| |||||| Sbjct: 115655 acctacatgcaccgtcccggcgacggaactccccgtcccgtaaccctaatccccggcgac 115714 Query: 249 ggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgcgccc 308 || ||||| || ||||| || |||||||| ||||| | ||||| || ||||||||||| Sbjct: 115715 gggatcggcccactcgtaaccggcgccgttgagcaactaatggaagcgatgcacgcgcca 115774 Query: 309 gtctacttcgagacatacgacgtccacggcgacatg 344 || |||||||||| || |||||| || || |||||| Sbjct: 115775 gtttacttcgagaaattcgacgtacatggtgacatg 115810
>gb|AY216776.1| Brassica napus cultivar Keng C1 NAD-dependent isocitrate dehydrogenase gamma subunit mRNA, complete cds Length = 1448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccac 335 |||||||| || |||||||| |||||||||||||| ||||||||| | | |||||| ||| Sbjct: 250 gtggagcaagtgatggaggcgatgcacgcgcccgtgtacttcgagcccttcgacgttcac 309 Query: 336 ggcgacatg 344 || |||||| Sbjct: 310 ggagacatg 318
>gb|AY216775.1| Brassica napus cultivar Shan 2B NAD-dependent isocitrate dehydrogenase gamma subunit mRNA, complete cds Length = 1448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccac 335 |||||||| || |||||||| |||||||||||||| ||||||||| | | |||||| ||| Sbjct: 250 gtggagcaagtgatggaggcgatgcacgcgcccgtgtacttcgagcccttcgacgttcac 309 Query: 336 ggcgacatg 344 || |||||| Sbjct: 310 ggagacatg 318
>gb|AY216774.1| Brassica napus cultivar Shan 2A NAD-dependent isocitrate dehydrogenase gamma subunit mRNA, complete cds Length = 1448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacgacgtccac 335 |||||||| || |||||||| |||||||||||||| ||||||||| | | |||||| ||| Sbjct: 250 gtggagcaagtgatggaggcgatgcacgcgcccgtgtacttcgagcccttcgacgttcac 309 Query: 336 ggcgacatg 344 || |||||| Sbjct: 310 ggagacatg 318
>emb|Y16126.1|LES16126 Lycopersicon esculentum mRNA for mitochondrial NAD-dependent isocitrate dehydrogenase-like protein Length = 1675 Score = 56.0 bits (28), Expect = 1e-04 Identities = 94/116 (81%) Strand = Plus / Plus Query: 189 acctacatgccccggccgggcgacggcaccccgcgccccgtcacgctcatcccgggcgac 248 |||||||||||||| || || || ||||| || ||| ||||||| |||||||| || ||| Sbjct: 256 acctacatgccccgacccggtgatggcactccacgcgccgtcacactcatccccggtgac 315 Query: 249 ggcatcgggcccctcgtcacaggcgccgtggagcaggtcatggaggccatgcacgc 304 || ||||| || || || || || || || || || ||||||||||| |||||||| Sbjct: 316 gggatcggacctctagtaaccggtgctgttgaacaagtcatggaggcgatgcacgc 371
>ref|NM_102983.1| Arabidopsis thaliana oxidoreductase AT1G32480 mRNA, complete cds Length = 885 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 282 caggtcatggaggccatgcacgcgcccgtctacttcgagacatac 326 ||||| ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 52 caggtgatggatgcaatgcaagcgccggtctacttcgagacatac 96
>gb|DQ446314.1| Arabidopsis thaliana clone pENTR221-At1g32480 isocitrate/isopropylmalate dehydrogenase family protein (At1g32480) mRNA, complete cds Length = 908 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 282 caggtcatggaggccatgcacgcgcccgtctacttcgagacatac 326 ||||| ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 52 caggtgatggatgcaatgcaagcgccggtctacttcgagacatac 96
>gb|AC007767.3|F5D14 Sequence of BAC F5D14 from Arabidopsis thaliana chromosome 1, complete sequence Length = 127462 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 282 caggtcatggaggccatgcacgcgcccgtctacttcgagacatac 326 ||||| ||||| || ||||| ||||| |||||||||||||||||| Sbjct: 102921 caggtgatggatgcaatgcaagcgccggtctacttcgagacatac 102965
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 351 gtgccgcccgcggtcatcgagtccatc 377 |||||||||||||||| |||||||||| Sbjct: 1661622 gtgccgcccgcggtcaccgagtccatc 1661596
>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA Length = 1089 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 cacgctcatcccgggcgacggcatcgggcc 259 ||||||| |||| ||||||||||||||||| Sbjct: 102 cacgctcttcccaggcgacggcatcgggcc 131
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 tcatcccgggcgacggcatcgg 256 |||||||||||||||||||||| Sbjct: 3991920 tcatcccgggcgacggcatcgg 3991941 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ccggccgggcgacggcaccc 219 |||||||||||||||||||| Sbjct: 2549404 ccggccgggcgacggcaccc 2549423
>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent isocitrate dehydrogenase a, complete cds Length = 1424 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 cacgctcatcccgggcgacggcatcgggcc 259 ||||||| |||| ||||||||||||||||| Sbjct: 228 cacgctcttcccaggcgacggcatcgggcc 257
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 cacgctcatcccgggcgacggcatcgggcc 259 ||||||| |||| ||||||||||||||||| Sbjct: 9664929 cacgctcttcccaggcgacggcatcgggcc 9664958
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 cacgctcatcccgggcgacggcatcgggcc 259 ||||||| |||| ||||||||||||||||| Sbjct: 102932 cacgctcttcccaggcgacggcatcgggcc 102961
>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full insert sequence Length = 1522 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 230 cacgctcatcccgggcgacggcatcgggcc 259 ||||||| |||| ||||||||||||||||| Sbjct: 242 cacgctcttcccaggcgacggcatcgggcc 271
>gb|AC157500.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0056O04, from chromosome 4, complete sequence Length = 90825 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 gcgatccgcaccgctcctccgccgcc 132 |||||||||||||| ||||||||||| Sbjct: 81193 gcgatccgcaccgcacctccgccgcc 81218
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 catgcccgccgtgccgcccgcg 362 |||||||||||||||||||||| Sbjct: 1772482 catgcccgccgtgccgcccgcg 1772503
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 gcgatccgcaccgctcctccgccgcc 132 |||||||||||||| ||||||||||| Sbjct: 26548 gcgatccgcaccgcacctccgccgcc 26573
>ref|NM_119730.2| Arabidopsis thaliana isocitrate dehydrogenase (NAD+)/ oxidoreductase AT4G35650 mRNA, complete cds Length = 1389 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacga 328 ||||| ||||||||||| || ||||||||||| || | ||||||| |||||| Sbjct: 234 gtggaacaggtcatggaagcgatgcacgcgccagtgcatttcgagagatacga 286
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cacggcggcggcgcgcgccgc 182 ||||||||||||||||||||| Sbjct: 951603 cacggcggcggcgcgcgccgc 951583
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 529 acgtcgacatcgtcgtcatca 549 ||||||||||||||||||||| Sbjct: 2407099 acgtcgacatcgtcgtcatca 2407119
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ggcggcggcgcgcgccgcacg 185 ||||||||||||||||||||| Sbjct: 2771449 ggcggcggcgcgcgccgcacg 2771429 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccgccgtgccgcccgcggtc 365 |||||||||||||||||||| Sbjct: 1156627 ccgccgtgccgcccgcggtc 1156646
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 529 acgtcgacatcgtcgtcatca 549 ||||||||||||||||||||| Sbjct: 329704 acgtcgacatcgtcgtcatca 329724
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgc 179 ||||||||||||||||||||| Sbjct: 168270 ggccacggcggcggcgcgcgc 168250
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 ggccacggcggcggcgcgcgc 179 ||||||||||||||||||||| Sbjct: 69849 ggccacggcggcggcgcgcgc 69869
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgc 179 ||||||||||||||||||||| Sbjct: 43875 ggccacggcggcggcgcgcgc 43855
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ggcggcggcgcgcgccgcacg 185 ||||||||||||||||||||| Sbjct: 2511764 ggcggcggcgcgcgccgcacg 2511744 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ccgccgtgccgcccgcggtc 365 |||||||||||||||||||| Sbjct: 1038080 ccgccgtgccgcccgcggtc 1038099
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 529 acgtcgacatcgtcgtcatca 549 ||||||||||||||||||||| Sbjct: 183921 acgtcgacatcgtcgtcatca 183941
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacga 328 ||||| ||||||||||| || ||||||||||| || | ||||||| |||||| Sbjct: 173370 gtggaacaggtcatggaagcgatgcacgcgccagtgcatttcgagagatacga 173422
>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII project) Length = 94315 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacga 328 ||||| ||||||||||| || ||||||||||| || | ||||||| |||||| Sbjct: 52610 gtggaacaggtcatggaagcgatgcacgcgccagtgcatttcgagagatacga 52662
>gb|BT006081.1| Arabidopsis thaliana clone U20681 putative NAD+ dependent isocitrate dehydrogenase (At4g35650) mRNA, complete cds Length = 1138 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacga 328 ||||| ||||||||||| || ||||||||||| || | ||||||| |||||| Sbjct: 169 gtggaacaggtcatggaagcgatgcacgcgccagtgcatttcgagagatacga 221
>gb|BT003922.1| Arabidopsis thaliana clone RAFL15-20-O15 (R20681) putative NAD+ dependent isocitrate dehydrogenase (At4g35650) mRNA, complete cds Length = 1405 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggccatgcacgcgcccgtctacttcgagacatacga 328 ||||| ||||||||||| || ||||||||||| || | ||||||| |||||| Sbjct: 234 gtggaacaggtcatggaagcgatgcacgcgccagtgcatttcgagagatacga 286
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 cgcaccgctcctccgccgcctggtc 137 |||||||||||||||| |||||||| Sbjct: 92863 cgcaccgctcctccgcggcctggtc 92887
>dbj|AK061346.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E12, full insert sequence Length = 1165 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 ccgggcgacggcatcgggccc 260 ||||||||||||||||||||| Sbjct: 72 ccgggcgacggcatcgggccc 92
>dbj|AB217287.1| Equus caballus DNA, microsatellite TKY3344 Length = 322 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 74 ccgccgcagccccagcctgccaccc 98 |||||||||||||||||| |||||| Sbjct: 91 ccgccgcagccccagccttccaccc 67
>gb|AF420594.1| Streptomyces noursei rearranged polyketide synthase (nysCd48) gene, partial cds Length = 2706 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 cgcaccgctcctccgccgcctggtc 137 |||||||||||||||| |||||||| Sbjct: 1890 cgcaccgctcctccgcggcctggtc 1914
>ref|NM_001031367.1| Gallus gallus dynactin 1 (p150, glued homolog, Drosophila) (DCTN1), mRNA Length = 4143 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgcgctccgccggatcgca 60 |||||||||||||||||||| Sbjct: 85 ccgcgctccgccggatcgca 66
>gb|AC138000.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0024M06, complete sequence Length = 51144 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 gtcgcccgcgctccgccggatcgc 59 ||||||||||| |||||||||||| Sbjct: 28301 gtcgcccgcgcgccgccggatcgc 28278
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 gtcgcccgcgctccgccggatcgc 59 ||||||||||| |||||||||||| Sbjct: 128989 gtcgcccgcgcgccgccggatcgc 128966
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 |||||||||||||| ||||||||| Sbjct: 81442 ggccacggcggcggagcgcgccgc 81419
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ccgccgtgccgcccgcggtc 365 |||||||||||||||||||| Sbjct: 2339637 ccgccgtgccgcccgcggtc 2339618
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||||||| |||||| Sbjct: 433365 ggccacggcggcggcgcccgccgc 433342
>gb|AC148650.1| Pan troglodytes chromosome X clone PTB-044F10 map human ortholog q28, complete sequence Length = 153826 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 catccgcccgccgcagccccagcc 90 |||||||||||| ||||||||||| Sbjct: 153317 catccgcccgccccagccccagcc 153340
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 |||||||||||||| ||||||||| Sbjct: 24705895 ggccacggcggcggagcgcgccgc 24705872
>gb|AC102575.11| Mus musculus chromosome 14, clone RP23-239P22, complete sequence Length = 238123 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cagccccagcctgccaccca 99 |||||||||||||||||||| Sbjct: 178639 cagccccagcctgccaccca 178620
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 tgcccgccgtgccgcccgcg 362 |||||||||||||||||||| Sbjct: 12062 tgcccgccgtgccgcccgcg 12081
>gb|AC141640.3| Mus musculus BAC clone RP23-319E4 from chromosome 19, complete sequence Length = 167363 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cagccccagcctgccaccca 99 |||||||||||||||||||| Sbjct: 15923 cagccccagcctgccaccca 15904
>gb|AC112523.5| Mus musculus BAC clone RP23-418K6 from chromosome 16, complete sequence Length = 186848 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 76802 ctcctccgcagcctggtcgcctcc 76779
>gb|AC122497.3| Mus musculus BAC clone RP24-404M1 from chromosome 19, complete sequence Length = 139762 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cagccccagcctgccaccca 99 |||||||||||||||||||| Sbjct: 117682 cagccccagcctgccaccca 117663
>gb|AC122843.2| Mus musculus BAC clone RP23-149L20 from 6, complete sequence Length = 207070 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tctcggaatccttcctccct 21 |||||||||||||||||||| Sbjct: 109850 tctcggaatccttcctccct 109869
>emb|AJ244019.1|SCO244019 Streptomyces coelicolor A3(2) dnaG gene and flanking genes Length = 4761 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 gcctcaagggcggcctcgccaccc 417 |||||||||||| ||||||||||| Sbjct: 546 gcctcaagggcgtcctcgccaccc 569
>gb|AC099398.5| Homo sapiens BAC clone RP11-731K22 from 7, complete sequence Length = 86311 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 ccccggcctgcccaccaggc 522 |||||||||||||||||||| Sbjct: 62578 ccccggcctgcccaccaggc 62559
>gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, complete sequence Length = 196932 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cagccccagcctgccaccca 99 |||||||||||||||||||| Sbjct: 145531 cagccccagcctgccaccca 145550
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 tggccacggcggcggcgcgcgccg 181 ||||| |||||||||||||||||| Sbjct: 584993 tggcctcggcggcggcgcgcgccg 585016
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gcggcggcgcgcgccgcacg 185 |||||||||||||||||||| Sbjct: 647497 gcggcggcgcgcgccgcacg 647516
>emb|X62773.2|GSDYNACT Gallus gallus mRNA for dynactin Length = 4143 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccgcgctccgccggatcgca 60 |||||||||||||||||||| Sbjct: 85 ccgcgctccgccggatcgca 66
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ccgggcgacggcatcgggcc 259 |||||||||||||||||||| Sbjct: 2817664 ccgggcgacggcatcgggcc 2817683
>gb|U52112.2| Homo sapiens chromosome X clone QLL-D9139, Qc-7G12, Qc-7C1, Qc-12B2, Qc-12D5, QLL-A074, Qc-9D3 map q28, complete sequence Length = 181343 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 catccgcccgccgcagccccagcc 90 |||||||||||| ||||||||||| Sbjct: 123137 catccgcccgccccagccccagcc 123160
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||||||| |||||| Sbjct: 1752707 ggccacggcggcggcgcccgccgc 1752684
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 gcctcaagggcggcctcgccaccc 417 |||||||||||| ||||||||||| Sbjct: 235733 gcctcaagggcgtcctcgccaccc 235710
>emb|AJ621334.1| Thermoproteus tenax leuB gene for putative isocitrate/isopropylmalate dehydrogenase Length = 1023 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 atcccgggcgacggcatcgggccc 260 ||||||||||||||||| |||||| Sbjct: 46 atcccgggcgacggcatagggccc 69
>emb|AL845333.3| Mouse DNA sequence from clone RP23-245E19 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 186256 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cagccccagcctgccaccca 99 |||||||||||||||||||| Sbjct: 150843 cagccccagcctgccaccca 150862
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 catccgcccgccgcagccccagcc 90 |||||||||||| ||||||||||| Sbjct: 123191 catccgcccgccccagccccagcc 123214
>gb|AE005969.1| Caulobacter crescentus CB15 section 295 of 359 of the complete genome Length = 10990 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||||||| |||||| Sbjct: 8832 ggccacggcggcggcgcccgccgc 8809
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 |||||||||||||| ||||||||| Sbjct: 1414 ggccacggcggcggagcgcgccgc 1391
>dbj|AK157781.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130038C21 product:hypothetical Beta tubulin containing protein, full insert sequence Length = 2393 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ccgctcctccgccgcctggt 136 |||||||||||||||||||| Sbjct: 368 ccgctcctccgccgcctggt 387
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 ccacggcggcggcgcgcgcc 180 |||||||||||||||||||| Sbjct: 1475790 ccacggcggcggcgcgcgcc 1475809
>dbj|AK164874.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930038J18 product:roundabout homolog 2 (Drosophila), full insert sequence Length = 2229 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 49 ctcctccgcagcctggtcgcctcc 26
>dbj|AK051227.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130019H05 product:KIAA1568 PROTEIN (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 340 ctcctccgcagcctggtcgcctcc 317
>dbj|AK035110.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430089E08 product:ROUNDABOUT2 PROTEIN (FRAGMENT) homolog [Gallus gallus], full insert sequence Length = 3531 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 300 ctcctccgcagcctggtcgcctcc 277
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||||||| |||||| Sbjct: 1032421 ggccacggcggcggcgcccgccgc 1032444
>dbj|AK048081.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130033H03 product:roundabout homolog 2 (Drosophila), full insert sequence Length = 4059 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 340 ctcctccgcagcctggtcgcctcc 317
>dbj|AK085461.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630029N22 product:ROBO2 (FRAGMENT) homolog [Rattus norvegicus], full insert sequence Length = 3821 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 49 ctcctccgcagcctggtcgcctcc 26
>gb|AF349510.1|AF349510 Aspergillus terreus general amidase-B (gmdB) gene, complete cds Length = 2880 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 ggcgccgtggagcaggtcat 289 |||||||||||||||||||| Sbjct: 1854 ggcgccgtggagcaggtcat 1873
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 gtcgcccgcgctccgccggatcgc 59 ||||||||||| |||||||||||| Sbjct: 7687966 gtcgcccgcgcgccgccggatcgc 7687989
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||| |||||||||| Sbjct: 15559423 ggccacggcggcgtcgcgcgccgc 15559400
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 |||||||||||||| ||||||||| Sbjct: 24622725 ggccacggcggcggagcgcgccgc 24622702
>gb|AC158234.2| Mus musculus BAC clone RP23-149C23 from chromosome 16, complete sequence Length = 227632 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ctcctccgccgcctggtcgcctcc 143 ||||||||| |||||||||||||| Sbjct: 110048 ctcctccgcagcctggtcgcctcc 110071
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gggcgacggcaccccgcgcc 225 |||||||||||||||||||| Sbjct: 1858207 gggcgacggcaccccgcgcc 1858188
>ref|XM_240008.3| PREDICTED: Rattus norvegicus similar to CG14998-PC, isoform C (LOC305453), mRNA Length = 2505 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gtggagcaggtcatggaggc 295 |||||||||||||||||||| Sbjct: 1513 gtggagcaggtcatggaggc 1532
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cccgccgtgccgcccgcggt 364 |||||||||||||||||||| Sbjct: 981201 cccgccgtgccgcccgcggt 981182
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 cggcggcggcgcgcgccgca 183 |||||||||||||||||||| Sbjct: 7711085 cggcggcggcgcgcgccgca 7711066 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 ccgccgcaacaaggtctgcctcaagggc 404 ||||||||||| ||||| |||||||||| Sbjct: 2560168 ccgccgcaacacggtcttcctcaagggc 2560141
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gccgcccgcggtcatcgagt 372 |||||||||||||||||||| Sbjct: 4268804 gccgcccgcggtcatcgagt 4268785
>dbj|AP003528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633D04 Length = 159636 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||| |||||||||| Sbjct: 48756 ggccacggcggcgtcgcgcgccgc 48733
>dbj|AK108010.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-H04, full insert sequence Length = 656 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggccacggcggcggcgcgcgccgc 182 |||||||||||||| ||||||||| Sbjct: 254 ggccacggcggcggagcgcgccgc 277
>dbj|AK099445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021G10, full insert sequence Length = 1814 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggccacggcggcggcgcgcgccgc 182 |||||||||||||| ||||||||| Sbjct: 225 ggccacggcggcggagcgcgccgc 248
>dbj|AK072945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149C14, full insert sequence Length = 1406 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||| |||||||||| Sbjct: 500 ggccacggcggcgtcgcgcgccgc 477
>gb|AC112957.14| Mus musculus chromosome 15, clone RP23-418C6, complete sequence Length = 186051 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ccgctcctccgccgcctggt 136 |||||||||||||||||||| Sbjct: 50325 ccgctcctccgccgcctggt 50306
>tpe|BN000608.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx79 gene for class III peroxidase 79 precursor, exons 1-2 Length = 1245 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ggccacggcggcggcgcgcgccgc 182 ||||||||||||| |||||||||| Sbjct: 534 ggccacggcggcgtcgcgcgccgc 511
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 gtcgcccgcgctccgccggatcgc 59 ||||||||||| |||||||||||| Sbjct: 7758053 gtcgcccgcgcgccgccggatcgc 7758076
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ggcggcggcgcgcgccgcac 184 |||||||||||||||||||| Sbjct: 1747586 ggcggcggcgcgcgccgcac 1747567
>emb|AJ287582.1|TSP287582 Tetrabothrius sp. DTJL-2000 18S rRNA gene Length = 2228 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 cccgccgcagccccagcctgccac 96 ||||||||||||||| |||||||| Sbjct: 1817 cccgccgcagccccaacctgccac 1794
>emb|X84221.1|HSHCFC1 H.sapiens HCFC1 gene Length = 8042 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 catccgcccgccgcagccccagcc 90 |||||||||||| ||||||||||| Sbjct: 2567 catccgcccgccccagccccagcc 2544 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,944,464 Number of Sequences: 3902068 Number of extensions: 3944464 Number of successful extensions: 125973 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119282 Number of HSP's gapped (non-prelim): 6689 length of query: 556 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 533 effective length of database: 17,143,297,704 effective search space: 9137377676232 effective search space used: 9137377676232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
