ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13e04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 208 bits (105), Expect = 2e-50 Identities = 200/231 (86%), Gaps = 3/231 (1%) Strand = Plus / Plus Query: 310 ggacgacgtcatcgtggctagcttccccaagtgcggcaccacgtgggtcaacgccctgac 369 ||||||||||||||| || ||||| ||||||| ||||||||| ||| | |||||||| || Sbjct: 284857 ggacgacgtcatcgtcgccagctttcccaagtccggcaccacttggcttaacgcccttac 284916 Query: 370 gttcgccaccatggcgcggcacgcctaccccgccgccggcgccgggcacccgctgctgcg 429 ||||||||||||||||||| | | |||| |||||||||||||| ||||||||| | || Sbjct: 284917 tttcgccaccatggcgcggcgcactaacccagccgccggcgccggccacccgctgttacg 284976 Query: 430 cctcaacccgcaccagtgcgtccctttcctggagggcctcttccggagcccgcgcgggga 489 ||||||||||||||||||| ||||||||||||| ||||||| |||| || ||| Sbjct: 284977 cctcaacccgcaccagtgcatccctttcctggacaaactcttccagagc---tgcacgga 285033 Query: 490 ggccaagctggaggcgctgccgtccccgcgcctcatgaacacgcacatgcc 540 ||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 285034 ggccaagctcgaggcgctgccgtccccgcgcctcatgaatacgcacatgcc 285084 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 572 ggcgggggcgggtgtaaggtcgtgtacgtctgcagggag 610 ||||| |||||||| |||||||||||| ||||||||||| Sbjct: 285104 ggcggcggcgggtgcaaggtcgtgtacatctgcagggag 285142 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tcggccccgtccctttcgcggacgt 108 |||||||||||||||| |||||||| Sbjct: 284652 tcggccccgtcccttttgcggacgt 284676
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 266 gtcccggcggccgtcgccctacatcgccgcttcgagccccgccgggacgacgtcatcgtg 325 |||||||||||||| ||||| | || ||||||| ||||||| ||||||||||||||| Sbjct: 7945033 gtcccggcggccgtggccctgcggcggcgcttcgttccccgccccgacgacgtcatcgtg 7945092 Query: 326 gctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggc 384 || ||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||| Sbjct: 7945093 gccagcctccccaagtgcggcaccacgtggctcatcgccctcacgttcgccaccatggc 7945151 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 428 cgcctcaacccgcaccagtgcgtccctttcctggagggcctcttc 472 ||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 7945213 cgcctcaacccgcaccagtgcctccctttcctcgagggcctcttc 7945257
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 266 gtcccggcggccgtcgccctacatcgccgcttcgagccccgccgggacgacgtcatcgtg 325 |||||||||||||| ||||| | || ||||||| ||||||| ||||||||||||||| Sbjct: 52551 gtcccggcggccgtggccctgcggcggcgcttcgttccccgccccgacgacgtcatcgtg 52610 Query: 326 gctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggc 384 || ||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||| Sbjct: 52611 gccagcctccccaagtgcggcaccacgtggctcatcgccctcacgttcgccaccatggc 52669 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 428 cgcctcaacccgcaccagtgcgtccctttcctggagggcctcttc 472 ||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 52731 cgcctcaacccgcaccagtgcctccctttcctcgagggcctcttc 52775
>dbj|AK070507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054C04, full insert sequence Length = 1260 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 266 gtcccggcggccgtcgccctacatcgccgcttcgagccccgccgggacgacgtcatcgtg 325 |||||||||||||| ||||| | || ||||||| ||||||| ||||||||||||||| Sbjct: 234 gtcccggcggccgtggccctgcggcggcgcttcgttccccgccccgacgacgtcatcgtg 293 Query: 326 gctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggc 384 || ||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||| Sbjct: 294 gccagcctccccaagtgcggcaccacgtggctcatcgccctcacgttcgccaccatggc 352 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 428 cgcctcaacccgcaccagtgcgtccctttcctggagggcctcttc 472 ||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 414 cgcctcaacccgcaccagtgcctccctttcctcgagggcctcttc 458
>ref|XM_476630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 333 tccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 293 tccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccaccatggcgcg 347
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 333 tccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2550933 tccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccaccatggcgcg 2550879 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 335 cccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcggc 389 ||||||||||||||||||||| |||| ||||| | ||||||||||||||||||| Sbjct: 2406825 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcggc 2406771 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 290 cgccgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcacc 349 |||||||||||||| ||| | ||||||| || |||| ||| | ||||||||||||||| Sbjct: 24853047 cgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcggcacc 24852988 Query: 350 acgtgggtcaacgccctgacgttcgccac 378 |||||| |||| |||||| | |||||||| Sbjct: 24852987 acgtggctcaaggccctggccttcgccac 24852959 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 414 ggcacccgctgctgcgcctcaacccgcaccagtgcgtccctttcctggaggg 465 ||||||||||||| || |||||||| ||| |||||||||| ||||||||||| Sbjct: 24852911 ggcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggg 24852860 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 333 tccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||||||||||||||||| |||| ||||| | |||||| |||||||||| Sbjct: 2542870 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgcctccatggcgcg 2542816 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatg 382 |||| |||||||||||||||||||||| |||| || ||| | |||||| ||||| Sbjct: 24791837 agctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccgccatg 24791890 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 416 cacccgctgctgcgcctcaacccgcac 442 ||||||||||| ||||||||||||||| Sbjct: 24791918 cacccgctgctccgcctcaacccgcac 24791944 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 416 cacccgctgctgcgcctcaacccgcaccagtgcgtccctttcctggag 463 |||||||| || || |||||||||||| | |||||||| ||| ||||| Sbjct: 2542760 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatggag 2542713
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 333 tccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 115913 tccccaagtgcggcaccacgtggctcaaggccctcgcgttcgccaccatggcgcg 115859 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 333 tccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||||||||||||||||| |||| ||||| | |||||| |||||||||| Sbjct: 107850 tccccaagtgcggcaccacgtggctcaaggccctcgccttcgcctccatggcgcg 107796 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 416 cacccgctgctgcgcctcaacccgcaccagtgcgtccctttcctggag 463 |||||||| || || |||||||||||| | |||||||| ||| ||||| Sbjct: 107740 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatggag 107693
>ref|NM_195276.1| Oryza sativa (japonica cultivar-group) putative flavonol 3-sulfotransferase (OSJNBb0038H12.7), mRNA Length = 1005 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 313 cgacgtcatcgtggctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgtt 372 ||||||| |||| || ||| ||||||||||||||||||||||| |||| |||||| | || Sbjct: 183 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 242 Query: 373 cgccacc 379 ||||||| Sbjct: 243 cgccacc 249
>ref|NM_186313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 335 cccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcggc 389 ||||||||||||||||||||| |||| ||||| | ||||||||||||||||||| Sbjct: 209 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcggc 155
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 313 cgacgtcatcgtggctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgtt 372 ||||||| |||| || ||| ||||||||||||||||||||||| |||| |||||| | || Sbjct: 19395 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 19454 Query: 373 cgccacc 379 ||||||| Sbjct: 19455 cgccacc 19461
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 313 cgacgtcatcgtggctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgtt 372 ||||||| |||| || ||| ||||||||||||||||||||||| |||| |||||| | || Sbjct: 5904488 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 5904429 Query: 373 cgccacc 379 ||||||| Sbjct: 5904428 cgccacc 5904422
>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077B15 Length = 139345 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 335 cccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatggcgcggc 389 ||||||||||||||||||||| |||| ||||| | ||||||||||||||||||| Sbjct: 109833 cccaagtgcggcaccacgtggctcaaggccctcgccttcgccaccatggcgcggc 109779
>dbj|AK066828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075L15, full insert sequence Length = 1243 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 313 cgacgtcatcgtggctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgtt 372 ||||||| |||| || ||| ||||||||||||||||||||||| |||| |||||| | || Sbjct: 291 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 350 Query: 373 cgccacc 379 ||||||| Sbjct: 351 cgccacc 357
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 69.9 bits (35), Expect = 9e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 313 cgacgtcatcgtggctagcttccccaagtgcggcaccacgtgggtcaacgccctgacgtt 372 ||||||| |||| || ||| ||||||||||||||||||||||| |||| |||||| | || Sbjct: 5905674 cgacgtcgtcgtcgccagcctccccaagtgcggcaccacgtggctcaaggccctggcctt 5905615 Query: 373 cgccacc 379 ||||||| Sbjct: 5905614 cgccacc 5905608
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 290 cgccgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcacc 349 |||||||||||||| ||| | ||||||| || |||| ||| | ||||||||||||||| Sbjct: 36679 cgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcggcacc 36620 Query: 350 acgtgggtcaacgccctgacgttcgccac 378 |||||| |||| |||||| | |||||||| Sbjct: 36619 acgtggctcaaggccctggccttcgccac 36591 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 414 ggcacccgctgctgcgcctcaacccgcaccagtgcgtccctttcctggaggg 465 ||||||||||||| || |||||||| ||| |||||||||| ||||||||||| Sbjct: 36543 ggcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggg 36492
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 290 cgccgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcacc 349 |||||||||||||| ||| | ||||||| || |||| ||| | ||||||||||||||| Sbjct: 87498 cgccgcttcgagccgcgcgccggcgacgtcctcctggcgagcctgcccaagtgcggcacc 87439 Query: 350 acgtgggtcaacgccctgacgttcgccac 378 |||||| |||| |||||| | |||||||| Sbjct: 87438 acgtggctcaaggccctggccttcgccac 87410 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 414 ggcacccgctgctgcgcctcaacccgcaccagtgcgtccctttcctggaggg 465 ||||||||||||| || |||||||| ||| |||||||||| ||||||||||| Sbjct: 87362 ggcacccgctgctccggctcaacccacacgagtgcgtcccgttcctggaggg 87311 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatg 382 |||| |||||||||||||||||||||| |||| || ||| | |||||| ||||| Sbjct: 26288 agctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccgccatg 26341 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 416 cacccgctgctgcgcctcaacccgcac 442 ||||||||||| ||||||||||||||| Sbjct: 26369 cacccgctgctccgcctcaacccgcac 26395
>ref|XM_481385.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1008 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 280 accacgtggctcaaggccctgactttcgccaccatggcgcg 320
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 12059971 accacgtggctcaaggccctgactttcgccaccatggcgcg 12060011 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 10720099 accacgtggctcaaggccctcgcgttcgccaccatggcgcg 10720059
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 111466 accacgtggctcaaggccctgactttcgccaccatggcgcg 111506
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 57105 accacgtggctcaaggccctgactttcgccaccatggcgcg 57145
>dbj|AK058698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C01, full insert sequence Length = 1315 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| |||||||| ||||||||||||||||| Sbjct: 345 accacgtggctcaaggccctgactttcgccaccatggcgcg 385
>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08 map near S2137, complete sequence Length = 134033 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 335 cccaagtgcggcaccacgtgggtcaacgccctgacgttcgccac 378 ||||||||||||||||||||| |||| |||||| | |||||||| Sbjct: 34433 cccaagtgcggcaccacgtggctcaaggccctggccttcgccac 34390
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 335 cccaagtgcggcaccacgtgggtcaacgccctgacgttcgccac 378 ||||||||||||||||||||| |||| |||||| | |||||||| Sbjct: 8623267 cccaagtgcggcaccacgtggctcaaggccctggccttcgccac 8623224 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaa 360 ||||||||||||| ||||||||| ||| |||| Sbjct: 17387013 agcttccccaagtccggcaccacctggctcaa 17387044 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 293 cgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcaccacg 352 ||||||||||| || | | ||||||| || | || ||||||||||||| ||||||||| Sbjct: 17345362 cgcttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacc 17345421 Query: 353 tgggtcaa 360 ||| |||| Sbjct: 17345422 tggctcaa 17345429
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 335 cccaagtgcggcaccacgtgggtcaacgccctgacgttcgccac 378 ||||||||||||||||||||| |||| |||||| | |||||||| Sbjct: 8694030 cccaagtgcggcaccacgtggctcaaggccctggccttcgccac 8693987 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaa 360 ||||||||||||| ||||||||| ||| |||| Sbjct: 17480723 agcttccccaagtccggcaccacctggctcaa 17480754 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 293 cgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcaccacg 352 ||||||||||| || | | ||||||| || | || ||||||||||||| ||||||||| Sbjct: 17439221 cgcttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacc 17439280 Query: 353 tgggtcaa 360 ||| |||| Sbjct: 17439281 tggctcaa 17439288
>gb|AY106554.1| Zea mays PCO133039 mRNA sequence Length = 474 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 290 cgccgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcacc 349 ||||||||| ||| |||| |||||||| ||| | || |||| |||||||||||||||| Sbjct: 265 cgccgcttcacgccgcgccccgacgacgtgatcctcgcgagctaccccaagtgcggcacc 324 Query: 350 acgtggg 356 ||||||| Sbjct: 325 acgtggg 331
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaacgccctgacgttcgccaccatg 382 |||| |||||||||||||||||||||| |||| || ||| | |||||| ||||| Sbjct: 310 agctaccccaagtgcggcaccacgtggctcaaggcgctggccttcgccgccatg 363 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 416 cacccgctgctgcgcctcaacccgcac 442 ||||||||||| ||||||||||||||| Sbjct: 391 cacccgctgctccgcctcaacccgcac 417
>ref|XM_481221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 304 accacgtggctcaaggccctcgcgttcgccaccatggcgcg 344
>ref|XM_464518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 814 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 553 gccgcgagccgccgcgccgggcggg 577 ||||||||||||||||||||||||| Sbjct: 284 gccgcgagccgccgcgccgggcggg 260
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 553 gccgcgagccgccgcgccgggcggg 577 ||||||||||||||||||||||||| Sbjct: 5654965 gccgcgagccgccgcgccgggcggg 5654989
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 553 gccgcgagccgccgcgccgggcggg 577 ||||||||||||||||||||||||| Sbjct: 82701 gccgcgagccgccgcgccgggcggg 82725
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 347 accacgtgggtcaacgccctgacgttcgccaccatggcgcg 387 ||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 17231 accacgtggctcaaggccctcgcgttcgccaccatggcgcg 17191
>dbj|AK068381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147P03, full insert sequence Length = 813 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 553 gccgcgagccgccgcgccgggcggg 577 ||||||||||||||||||||||||| Sbjct: 283 gccgcgagccgccgcgccgggcggg 259
>ref|XM_472069.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 416 cacccgctgctgcgcctcaacccgcac 442 |||||||||||||| |||||||||||| Sbjct: 364 cacccgctgctgcgtctcaacccgcac 390
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 416 cacccgctgctgcgcctcaacccgcac 442 |||||||||||||| |||||||||||| Sbjct: 17196318 cacccgctgctgcgtctcaacccgcac 17196292
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 416 cacccgctgctgcgcctcaacccgcac 442 |||||||||||||| |||||||||||| Sbjct: 140615 cacccgctgctgcgtctcaacccgcac 140589
>ref|XM_468588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1689 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ggaggagcacgcggacgccgac 175 |||||||||||||||||||||| Sbjct: 375 ggaggagcacgcggacgccgac 354
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 294 gcttcgagccccgccgggacgacgtc 319 ||||||||||||||| |||||||||| Sbjct: 31744 gcttcgagccccgccaggacgacgtc 31719
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ggaggagcacgcggacgccgac 175 |||||||||||||||||||||| Sbjct: 1307582 ggaggagcacgcggacgccgac 1307561
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ggaggagcacgcggacgccgac 175 |||||||||||||||||||||| Sbjct: 1307580 ggaggagcacgcggacgccgac 1307559
>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12, complete sequence Length = 146241 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ggaggagcacgcggacgccgac 175 |||||||||||||||||||||| Sbjct: 112484 ggaggagcacgcggacgccgac 112463
>dbj|AK070642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060I01, full insert sequence Length = 2028 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ggaggagcacgcggacgccgac 175 |||||||||||||||||||||| Sbjct: 448 ggaggagcacgcggacgccgac 427
>dbj|AK058595.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H02, full insert sequence Length = 1635 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 ggaggagcacgcggacgccgac 175 |||||||||||||||||||||| Sbjct: 55 ggaggagcacgcggacgccgac 34
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 cgccgcttcgagccccgccgg 310 ||||||||||||||||||||| Sbjct: 1624931 cgccgcttcgagccccgccgg 1624911
>emb|Z68504.1|OSHMGGN O.sativa 3-hydroxy-3-methylglutaryl-CoA reductase gene Length = 4920 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctaccccgccgccggcgccgg 414 ||||||||||||||||||||| Sbjct: 1007 ctaccccgccgccggcgccgg 1027
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 gccgggcacccgctgctgcgc 430 ||||||||||||||||||||| Sbjct: 2699733 gccgggcacccgctgctgcgc 2699713
>gb|AE005770.1| Caulobacter crescentus CB15 section 96 of 359 of the complete genome Length = 11274 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 560 gccgccgcgccgggcgggggc 580 ||||||||||||||||||||| Sbjct: 4085 gccgccgcgccgggcgggggc 4105
>dbj|AB097640.1| Umbraulva amamiensis genes for ITS1, 5.8S ribosomal RNA, ITS2, partial and complete sequence, specimen_voucher:Herbarium of Graduate School of Science, Hokkaido University, Sapporo (SAP):095052 Length = 529 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 399 ccgccgccggcgccgggcacc 419 ||||||||||||||||||||| Sbjct: 87 ccgccgccggcgccgggcacc 107
>gb|U43961.1|OSU43961 Oryza sativa 3-hydroxy-3-methylglutaryl-CoA reductase gene, promoter region and complete cds Length = 5822 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctaccccgccgccggcgccgg 414 ||||||||||||||||||||| Sbjct: 1909 ctaccccgccgccggcgccgg 1929
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 gccaagctggaggcgctgccg 511 ||||||||||||||||||||| Sbjct: 333052 gccaagctggaggcgctgccg 333072
>gb|U95816.1|OSHMGR2M Oryza sativa 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) mRNA, partial cds Length = 2167 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 ctaccccgccgccggcgccgg 414 ||||||||||||||||||||| Sbjct: 165 ctaccccgccgccggcgccgg 185
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 ggtgccgcgagccgccgcgc 569 |||||||||||||||||||| Sbjct: 375273 ggtgccgcgagccgccgcgc 375292
>ref|XM_463427.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 cgcctaccccgccgccggcgccgg 414 ||||||||||||||||| |||||| Sbjct: 24 cgcctaccccgccgccgccgccgg 47
>ref|NM_189334.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 167 cgctgctgcgcctcaacccg 186
>ref|XM_476629.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 40.1 bits (20), Expect = 8.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 416 cacccgctgctgcgcctcaacccgcaccagtgcgtccctttcctggag 463 |||||||| || || |||||||||||| | |||||||| ||| ||||| Sbjct: 64 cacccgctcctccggctcaacccgcacgactgcgtcccgttcatggag 111
>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21, complete sequence Length = 146539 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaa 360 ||||||||||||| ||||||||| ||| |||| Sbjct: 115795 agcttccccaagtccggcaccacctggctcaa 115826 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 293 cgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcaccacg 352 ||||||||||| || | | ||||||| || | || ||||||||||||| ||||||||| Sbjct: 74293 cgcttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacc 74352 Query: 353 tgggtcaa 360 ||| |||| Sbjct: 74353 tggctcaa 74360
>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10, complete sequence Length = 157609 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaa 360 ||||||||||||| ||||||||| ||| |||| Sbjct: 141788 agcttccccaagtccggcaccacctggctcaa 141819 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 293 cgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcaccacg 352 ||||||||||| || | | ||||||| || | || ||||||||||||| ||||||||| Sbjct: 100286 cgcttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacc 100345 Query: 353 tgggtcaa 360 ||| |||| Sbjct: 100346 tggctcaa 100353
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 47586 cgctgctgcgcctcaacccg 47567
>ref|XM_870961.1| PREDICTED: Bos taurus similar to Carnitine O-palmitoyltransferase I, mitochondrial liver isoform (CPT I) (CPTI-L) (Carnitine palmitoyltransferase 1A) (LOC618627), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 cggggaggccaagctggaggcgct 507 ||||||||||||||||| |||||| Sbjct: 1272 cggggaggccaagctggcggcgct 1295
>gb|AF402803.1| Oryza sativa (japonica cultivar-group) clone E30945_1A putative glutathione S-transferase OsGSTU16 mRNA, partial cds Length = 331 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 276 cgctgctgcgcctcaacccg 295
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 gccgcgagccgccgcgccgggcgg 576 ||||||||||| |||||||||||| Sbjct: 522590 gccgcgagccggcgcgccgggcgg 522613
>emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chromosome 13, complete sequence Length = 210718 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gactcaggcttggtctccag 135 |||||||||||||||||||| Sbjct: 79086 gactcaggcttggtctccag 79105
>ref|XM_744576.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g05390) partial mRNA Length = 5511 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 tgtcccggcggccgtcgccc 284 |||||||||||||||||||| Sbjct: 2845 tgtcccggcggccgtcgccc 2826
>gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, complete sequence Length = 182735 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 gcgccgggcgggggcgggtg 585 |||||||||||||||||||| Sbjct: 33452 gcgccgggcgggggcgggtg 33471
>gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, complete sequence Length = 161156 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 566 gcgccgggcgggggcgggtg 585 |||||||||||||||||||| Sbjct: 22404 gcgccgggcgggggcgggtg 22423
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 403 cgccggcgccgggcacccgctgctgcgc 430 |||||||||||||| | ||||||||||| Sbjct: 3081444 cgccggcgccgggctcgcgctgctgcgc 3081417
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 ccgggcacccgctgctgcgc 430 |||||||||||||||||||| Sbjct: 376079 ccgggcacccgctgctgcgc 376098
>emb|Y18830.1|OAY18830 Ovis aries partial mRNA for liver-type carnitine palmitoyltransferase 1, CPT1A gene, breed Finn-Dorset X Length = 1490 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 cggggaggccaagctggaggcgct 507 ||||||||||||||||| |||||| Sbjct: 250 cggggaggccaagctggcggcgct 273
>emb|Y18387.1|OAY18387 Ovis aries mRNA for liver-type carnitine palmitoyltransferase 1, (CPT1A gene), breed mixed Length = 2490 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 cggggaggccaagctggaggcgct 507 ||||||||||||||||| |||||| Sbjct: 1250 cggggaggccaagctggcggcgct 1273
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 553 gccgcgagccgccgcgccgggcgg 576 ||||||||||| |||||||||||| Sbjct: 1841856 gccgcgagccggcgcgccgggcgg 1841879 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 gccgcgagccgccgcgccgggcgg 576 ||||||||||| |||||||||||| Sbjct: 736101 gccgcgagccggcgcgccgggcgg 736078
>gb|AE005976.1| Caulobacter crescentus CB15 section 302 of 359 of the complete genome Length = 11299 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 ccgcgccgggcgggggcggg 583 |||||||||||||||||||| Sbjct: 1927 ccgcgccgggcgggggcggg 1908
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gccgagcgcgccgaggccca 209 |||||||||||||||||||| Sbjct: 3742541 gccgagcgcgccgaggccca 3742522
>ref|NM_001009414.1| Ovis aries carnitine O-palmitoyltransferase (CPT1A), mRNA Length = 2490 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 484 cggggaggccaagctggaggcgct 507 ||||||||||||||||| |||||| Sbjct: 1250 cggggaggccaagctggcggcgct 1273
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 20049261 cgctgctgcgcctcaacccg 20049242
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 42231390 cgctgctgcgcctcaacccg 42231409 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 cgcctaccccgccgccggcgccgg 414 ||||||||||||||||| |||||| Sbjct: 28876093 cgcctaccccgccgccgccgccgg 28876070
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 3347 cgctgctgcgcctcaacccg 3366
>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1294_F06 Length = 121088 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 104588 cgctgctgcgcctcaacccg 104607
>gb|AC127496.5| Homo sapiens chromosome 17, clone CTD-2561B21, complete sequence Length = 166274 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 gcgccgggcgggggcgggtg 585 |||||||||||||||||||| Sbjct: 13366 gcgccgggcgggggcgggtg 13347
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 cgccgccggcgccgggcacc 419 |||||||||||||||||||| Sbjct: 1145147 cgccgccggcgccgggcacc 1145166
>gb|AC116535.9| Homo sapiens chromosome 11, clone RP11-685M7, complete sequence Length = 192490 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ggggaggccaagctggaggc 504 |||||||||||||||||||| Sbjct: 124208 ggggaggccaagctggaggc 124189
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 cgcctaccccgccgccggcgccgg 414 ||||||||||||||||| |||||| Sbjct: 94136 cgcctaccccgccgccgccgccgg 94113
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tcctggagggcctcttccgg 475 |||||||||||||||||||| Sbjct: 1520002 tcctggagggcctcttccgg 1519983
>dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B03, full insert sequence Length = 1610 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cgctgctgcgcctcaacccg 439 |||||||||||||||||||| Sbjct: 222 cgctgctgcgcctcaacccg 241
>dbj|AK104701.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C09, full insert sequence Length = 1361 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 cgcctaccccgccgccggcgccgg 414 ||||||||||||||||| |||||| Sbjct: 119 cgcctaccccgccgccgccgccgg 142
>dbj|AK067215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098I22, full insert sequence Length = 1441 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 cgcctaccccgccgccggcgccgg 414 ||||||||||||||||| |||||| Sbjct: 120 cgcctaccccgccgccgccgccgg 143
>dbj|AK061183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-D11, full insert sequence Length = 1225 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 293 cgcttcgagccccgccgggacgacgtcatcgtggctagcttccccaagtgcggcaccacg 352 ||||||||||| || | | ||||||| || | || ||||||||||||| ||||||||| Sbjct: 228 cgcttcgagccgcggccgtccgacgtcctcctcgcgagcttccccaagtccggcaccacc 287 Query: 353 tgggtcaa 360 ||| |||| Sbjct: 288 tggctcaa 295
>dbj|AK061003.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H02, full insert sequence Length = 1222 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 329 agcttccccaagtgcggcaccacgtgggtcaa 360 ||||||||||||| ||||||||| ||| |||| Sbjct: 239 agcttccccaagtccggcaccacctggctcaa 270
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tcatcaatggcgaagacacc 72 |||||||||||||||||||| Sbjct: 1008558 tcatcaatggcgaagacacc 1008539
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 tcctggagggcctcttccgg 475 |||||||||||||||||||| Sbjct: 1196003 tcctggagggcctcttccgg 1195984 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,937,957 Number of Sequences: 3902068 Number of extensions: 3937957 Number of successful extensions: 85407 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81789 Number of HSP's gapped (non-prelim): 3618 length of query: 610 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 587 effective length of database: 17,143,297,704 effective search space: 10063115752248 effective search space used: 10063115752248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
