ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart13e03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108999.1| Zea mays PCO095139 mRNA sequence Length = 719 Score = 327 bits (165), Expect = 2e-86 Identities = 326/379 (86%), Gaps = 3/379 (0%) Strand = Plus / Plus Query: 190 tctggtccggcaaaggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctc 249 ||||||||||| ||||| |||||||| ||||||||| |||| || || || |||||||| Sbjct: 234 tctggtccggctaaggtctggcaaccgggtgtagatacactggaagatggggaggagctg 293 Query: 250 cagtttgatcccgaggcttacaactatctccgaggatttagtattgggtggccttgcttg 309 ||||||||||| |||||||||| ||||||||||| ||| | ||||| ||| |||||||| Sbjct: 294 cagtttgatcctcaggcttacaattatctccgaggttttggcattggctggtcttgcttg 353 Query: 310 agctttgatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacatta 369 || ||||||||||||| ||||||||||| || ||||| ||||||||||| || ||||| Sbjct: 354 agttttgatgttgtgcgtgatcaacttggactcgtccgttcagagttccctcatacattc 413 Query: 370 tacggcgttgctggaactcaggctgaaaaggctccatggaattatattggtgtttacaag 429 || || ||||||||||| |||||||| || ||| ||||||| |||||||| |||| |||| Sbjct: 414 tatggtgttgctggaacgcaggctgagaaagcttcatggaactatattggcgttttcaag 473 Query: 430 ctttccaacataaacgggaagaagcgggaacctataccatcttcaaaagttgaggctgac 489 ||||| ||||||| || ||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 474 ctttctaacataagtggcaagaagcgggaacctataccagcttcagcagttgaagctgac 533 Query: 490 agtgatatggatagtgacagcagcagtgatgaagaagaagaggaggaaattaatgaggat 549 | |||| ||||||||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 534 actgatgtggatagtgacagcagcagcgatgaagaagatgaagag---attaatgaggat 590 Query: 550 ataaagcccatcctacatc 568 | ||| ||||||||||||| Sbjct: 591 acaaaacccatcctacatc 609
>dbj|AK111725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031P19, full insert sequence Length = 1730 Score = 274 bits (138), Expect = 3e-70 Identities = 279/326 (85%) Strand = Plus / Plus Query: 202 aaggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatccc 261 ||||| |||||||| || || ||| |||| || ||||| |||||||||||||| ||||| Sbjct: 173 aaggtatggcaacctggcgtggatacactggaagagggggaggagctccagttcgatcct 232 Query: 262 gaggcttacaactatctccgaggatttagtattgggtggccttgcttgagctttgatgtt 321 |||||||||| ||||||||||| |||| ||||| ||||| |||||||| ||||||||| Sbjct: 233 caggcttacaattatctccgagggtttaacattggctggccatgcttgagttttgatgtt 292 Query: 322 gtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatacggcgttgct 381 |||| ||||||||||| ||||| ||||| || |||||||| |||||||| ||||||||| Sbjct: 293 gtgcgggatcaacttggccttgtgcgatctgaattcccacatacattatatggcgttgct 352 Query: 382 ggaactcaggctgaaaaggctccatggaattatattggtgtttacaagctttccaacata 441 ||||||||||| || | |||| ||||||||||||| || ||| |||| ||| ||||||| Sbjct: 353 ggaactcaggccgagagggctacatggaattatatcggcattttcaagatttgcaacata 412 Query: 442 aacgggaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgatatggat 501 ||||||||||||||||||||||||||| | ||| | |||| | ||||||||||||||| Sbjct: 413 aacgggaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggat 472 Query: 502 agtgacagcagcagtgatgaagaaga 527 ||||| || || |||||||||||||| Sbjct: 473 agtgaaagtagtagtgatgaagaaga 498
>gb|DQ491004.1| Oryza sativa (japonica cultivar-group) immature pollen 1 (RIP1) mRNA, complete cds Length = 1398 Score = 250 bits (126), Expect = 4e-63 Identities = 276/326 (84%) Strand = Plus / Plus Query: 202 aaggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatccc 261 ||||| |||||||| ||||| ||| |||| || || || |||||||||||||| ||||| Sbjct: 88 aaggtatggcaacctggtgtggatacactggaagaaggggaggagctccagttcgatcct 147 Query: 262 gaggcttacaactatctccgaggatttagtattgggtggccttgcttgagctttgatgtt 321 |||||||||| |||||| |||| |||| ||||| ||||| |||||||| || |||||| Sbjct: 148 caggcttacaattatctcagagggtttaacattggctggccgtgcttgagtttcgatgtt 207 Query: 322 gtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatacggcgttgct 381 |||| ||||||||||| || || ||||| || |||||||| |||||||| ||||||||| Sbjct: 208 gtgcgggatcaacttggactcgtgcgatcggaattcccacatacattatatggcgttgct 267 Query: 382 ggaactcaggctgaaaaggctccatggaattatattggtgtttacaagctttccaacata 441 |||||||||||||| | |||| ||||||||||||| || ||| |||| ||| ||||||| Sbjct: 268 ggaactcaggctgagagggcttcatggaattatataggcattttcaagatttgcaacata 327 Query: 442 aacgggaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgatatggat 501 || |||||||||||||||||||||||| | ||| | |||| | ||||||||||||||| Sbjct: 328 aatgggaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggat 387 Query: 502 agtgacagcagcagtgatgaagaaga 527 ||||| || || |||||||||||||| Sbjct: 388 agtgaaagtagtagtgatgaagaaga 413
>gb|BT016296.1| Zea mays clone Contig129 mRNA sequence Length = 1496 Score = 180 bits (91), Expect = 3e-42 Identities = 168/193 (87%), Gaps = 3/193 (1%) Strand = Plus / Plus Query: 376 gttgctggaactcaggctgaaaaggctccatggaattatattggtgtttacaagctttcc 435 ||||||||||| |||||||| || |||||||||| |||||||| |||| ||||||||| Sbjct: 19 gttgctggaacgcaggctgagaaacctccatggaactatattggcgttttcaagctttct 78 Query: 436 aacataaacgggaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgat 495 ||||||| || ||||||||||||||||||||| ||||| |||||| ||||||| |||| Sbjct: 79 aacataagtggcaagaagcgggaacctataccagcttcagcagttgaagctgacactgat 138 Query: 496 atggatagtgacagcagcagtgatgaagaagaagaggaggaaattaatgaggatataaag 555 ||||||||||||||||||| ||||||||||| || ||| ||||||||||||| ||| Sbjct: 139 gtggatagtgacagcagcagcgatgaagaagatgaagag---attaatgaggatacaaaa 195 Query: 556 cccatcctacatc 568 ||||||||||||| Sbjct: 196 cccatcctacatc 208
>gb|AC169378.2| Sorghum bicolor clone SB_BBc0007L02, complete sequence Length = 138518 Score = 172 bits (87), Expect = 8e-40 Identities = 158/181 (87%), Gaps = 3/181 (1%) Strand = Plus / Plus Query: 387 tcaggctgaaaaggctccatggaattatattggtgtttacaagctttccaacataaacgg 446 ||||||||| || ||| |||||||||||||||| |||| ||||||||| ||||||| || Sbjct: 29660 tcaggctgagaaagcttcatggaattatattggcgttttcaagctttctaacataagtgg 29719 Query: 447 gaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgatatggatagtga 506 |||||||||||||||||||||| ||||| ||||| | ||||| |||| ||||||| || Sbjct: 29720 gaagaagcgggaacctataccagcttcagcggttgatggtgacactgatgtggatagcga 29779 Query: 507 cagcagcagtgatgaagaagaagaggaggaaattaatgaggatataaagcccatcctaca 566 ||||||||||||| |||||||| || |||||||||||||||| ||||||||||||||| Sbjct: 29780 cagcagcagtgat---gaagaagatgaagaaattaatgaggatacaaagcccatcctaca 29836 Query: 567 t 567 | Sbjct: 29837 t 29837 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| |||||||||||||| || || || |||||||| ||||||||||| | Sbjct: 28756 aggtctggcaaccgggtgtagatgcactggaagatggggaggagctgcagtttgatcctg 28815 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| ||||||||||| ||| | ||||| ||| |||||||||| Sbjct: 28816 aggcttacaattatctccgaggttttggcattggctggtcttgcttgag 28864 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 313 tttgatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatac 372 ||||||||||||| ||||||||||| || ||||||||||||||||| || ||||| || Sbjct: 28970 tttgatgttgtgcgtgatcaacttggactcgtccgatcagagttccctcatacattctat 29029 Query: 373 ggcgttgctggaactcagg 391 || ||||||||||| |||| Sbjct: 29030 ggtgttgctggaacgcagg 29048
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 113 bits (57), Expect = 6e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 399 ggctccatggaattatattggtgtttacaagctttccaacataaacgggaagaagcggga 458 |||| ||||||||||||| || ||| |||| ||| |||||||||||||||||||||||| Sbjct: 129999 ggctacatggaattatatcggcattttcaagatttgcaacataaacgggaagaagcggga 129940 Query: 459 acctataccatcttcaaaagttgaggctgacagtgatatggatagtgacagcagcagtga 518 |||||||||| | ||| | |||| | |||||||||||||||||||| || || ||||| Sbjct: 129939 acctataccagcatcagcaattgatggcgacagtgatatggatagtgaaagtagtagtga 129880 Query: 519 tgaagaaga 527 ||||||||| Sbjct: 129879 tgaagaaga 129871 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 313 tttgatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatac 372 ||||||||||||| ||||||||||| ||||| ||||| || |||||||| |||||||| Sbjct: 130358 tttgatgttgtgcgggatcaacttggccttgtgcgatctgaattcccacatacattatat 130299 Query: 373 ggcgttgctggaactcagg 391 ||||||||||||||||||| Sbjct: 130298 ggcgttgctggaactcagg 130280 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| || || ||| |||| || ||||| |||||||||||||| ||||| Sbjct: 130573 aggtatggcaacctggcgtggatacactggaagagggggaggagctccagttcgatcctc 130514 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| ||||||||||| |||| ||||| ||||| |||||||| Sbjct: 130513 aggcttacaattatctccgagggtttaacattggctggccatgcttgag 130465
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 387 tcaggctgaaaaggctccatggaattatattggtgtttacaagctttccaacataaacgg 446 ||||||||| | |||| ||||||||||||| || ||| |||| ||| ||||||||| || Sbjct: 1564448 tcaggctgagagggcttcatggaattatataggcattttcaagatttgcaacataaatgg 1564389 Query: 447 gaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgatatggatagtga 506 |||||||||||||||||||||| | ||| | |||| | |||||||||||||||||||| Sbjct: 1564388 gaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggatagtga 1564329 Query: 507 cagcagcagtgatgaagaaga 527 || || |||||||||||||| Sbjct: 1564328 aagtagtagtgatgaagaaga 1564308 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 316 gatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatacggc 375 |||||||||| ||||||||||| || || ||||| || |||||||| |||||||| ||| Sbjct: 1564794 gatgttgtgcgggatcaacttggactcgtgcgatcggaattcccacatacattatatggc 1564735 Query: 376 gttgctggaactcagg 391 |||||||||||||||| Sbjct: 1564734 gttgctggaactcagg 1564719 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| ||||| ||| |||| || || || |||||||||||||| ||||| Sbjct: 1565009 aggtatggcaacctggtgtggatacactggaagaaggggaggagctccagttcgatcctc 1564950 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| |||||| |||| |||| ||||| ||||| |||||||| Sbjct: 1564949 aggcttacaattatctcagagggtttaacattggctggccgtgcttgag 1564901
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 113 bits (57), Expect = 6e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 399 ggctccatggaattatattggtgtttacaagctttccaacataaacgggaagaagcggga 458 |||| ||||||||||||| || ||| |||| ||| |||||||||||||||||||||||| Sbjct: 1615463 ggctacatggaattatatcggcattttcaagatttgcaacataaacgggaagaagcggga 1615404 Query: 459 acctataccatcttcaaaagttgaggctgacagtgatatggatagtgacagcagcagtga 518 |||||||||| | ||| | |||| | |||||||||||||||||||| || || ||||| Sbjct: 1615403 acctataccagcatcagcaattgatggcgacagtgatatggatagtgaaagtagtagtga 1615344 Query: 519 tgaagaaga 527 ||||||||| Sbjct: 1615343 tgaagaaga 1615335 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 313 tttgatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatac 372 ||||||||||||| ||||||||||| ||||| ||||| || |||||||| |||||||| Sbjct: 1615822 tttgatgttgtgcgggatcaacttggccttgtgcgatctgaattcccacatacattatat 1615763 Query: 373 ggcgttgctggaactcagg 391 ||||||||||||||||||| Sbjct: 1615762 ggcgttgctggaactcagg 1615744 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| || || ||| |||| || ||||| |||||||||||||| ||||| Sbjct: 1616037 aggtatggcaacctggcgtggatacactggaagagggggaggagctccagttcgatcctc 1615978 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| ||||||||||| |||| ||||| ||||| |||||||| Sbjct: 1615977 aggcttacaattatctccgagggtttaacattggctggccatgcttgag 1615929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 113 bits (57), Expect = 6e-22 Identities = 111/129 (86%) Strand = Plus / Minus Query: 399 ggctccatggaattatattggtgtttacaagctttccaacataaacgggaagaagcggga 458 |||| ||||||||||||| || ||| |||| ||| |||||||||||||||||||||||| Sbjct: 1613184 ggctacatggaattatatcggcattttcaagatttgcaacataaacgggaagaagcggga 1613125 Query: 459 acctataccatcttcaaaagttgaggctgacagtgatatggatagtgacagcagcagtga 518 |||||||||| | ||| | |||| | |||||||||||||||||||| || || ||||| Sbjct: 1613124 acctataccagcatcagcaattgatggcgacagtgatatggatagtgaaagtagtagtga 1613065 Query: 519 tgaagaaga 527 ||||||||| Sbjct: 1613064 tgaagaaga 1613056 Score = 93.7 bits (47), Expect = 6e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 313 tttgatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatac 372 ||||||||||||| ||||||||||| ||||| ||||| || |||||||| |||||||| Sbjct: 1613543 tttgatgttgtgcgggatcaacttggccttgtgcgatctgaattcccacatacattatat 1613484 Query: 373 ggcgttgctggaactcagg 391 ||||||||||||||||||| Sbjct: 1613483 ggcgttgctggaactcagg 1613465 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| || || ||| |||| || ||||| |||||||||||||| ||||| Sbjct: 1613758 aggtatggcaacctggcgtggatacactggaagagggggaggagctccagttcgatcctc 1613699 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| ||||||||||| |||| ||||| ||||| |||||||| Sbjct: 1613698 aggcttacaattatctccgagggtttaacattggctggccatgcttgag 1613650
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 387 tcaggctgaaaaggctccatggaattatattggtgtttacaagctttccaacataaacgg 446 ||||||||| | |||| ||||||||||||| || ||| |||| ||| ||||||||| || Sbjct: 1564448 tcaggctgagagggcttcatggaattatataggcattttcaagatttgcaacataaatgg 1564389 Query: 447 gaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgatatggatagtga 506 |||||||||||||||||||||| | ||| | |||| | |||||||||||||||||||| Sbjct: 1564388 gaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggatagtga 1564329 Query: 507 cagcagcagtgatgaagaaga 527 || || |||||||||||||| Sbjct: 1564328 aagtagtagtgatgaagaaga 1564308 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 316 gatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatacggc 375 |||||||||| ||||||||||| || || ||||| || |||||||| |||||||| ||| Sbjct: 1564794 gatgttgtgcgggatcaacttggactcgtgcgatcggaattcccacatacattatatggc 1564735 Query: 376 gttgctggaactcagg 391 |||||||||||||||| Sbjct: 1564734 gttgctggaactcagg 1564719 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| ||||| ||| |||| || || || |||||||||||||| ||||| Sbjct: 1565009 aggtatggcaacctggtgtggatacactggaagaaggggaggagctccagttcgatcctc 1564950 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| |||||| |||| |||| ||||| ||||| |||||||| Sbjct: 1564949 aggcttacaattatctcagagggtttaacattggctggccgtgcttgag 1564901
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 113 bits (57), Expect = 6e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 387 tcaggctgaaaaggctccatggaattatattggtgtttacaagctttccaacataaacgg 446 ||||||||| | |||| ||||||||||||| || ||| |||| ||| ||||||||| || Sbjct: 61284 tcaggctgagagggcttcatggaattatataggcattttcaagatttgcaacataaatgg 61343 Query: 447 gaagaagcgggaacctataccatcttcaaaagttgaggctgacagtgatatggatagtga 506 |||||||||||||||||||||| | ||| | |||| | |||||||||||||||||||| Sbjct: 61344 gaagaagcgggaacctataccagcatcagcaattgatggcgacagtgatatggatagtga 61403 Query: 507 cagcagcagtgatgaagaaga 527 || || |||||||||||||| Sbjct: 61404 aagtagtagtgatgaagaaga 61424 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 316 gatgttgtgcaagatcaacttgggcttgtccgatcagagttcccacacacattatacggc 375 |||||||||| ||||||||||| || || ||||| || |||||||| |||||||| ||| Sbjct: 60938 gatgttgtgcgggatcaacttggactcgtgcgatcggaattcccacatacattatatggc 60997 Query: 376 gttgctggaactcagg 391 |||||||||||||||| Sbjct: 60998 gttgctggaactcagg 61013 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 203 aggtgtggcaaccaggtgtagatgcactcgaggagggagaggagctccagtttgatcccg 262 |||| |||||||| ||||| ||| |||| || || || |||||||||||||| ||||| Sbjct: 60723 aggtatggcaacctggtgtggatacactggaagaaggggaggagctccagttcgatcctc 60782 Query: 263 aggcttacaactatctccgaggatttagtattgggtggccttgcttgag 311 |||||||||| |||||| |||| |||| ||||| ||||| |||||||| Sbjct: 60783 aggcttacaattatctcagagggtttaacattggctggccgtgcttgag 60831
>ref|NM_031485.2| Homo sapiens glutamate-rich WD repeat containing 1 (GRWD1), mRNA Length = 2414 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 563 gcagtgatgaagaagaagaggaggaa 588
>gb|BC047351.1| Homo sapiens glutamate-rich WD repeat containing 1, mRNA (cDNA clone IMAGE:3918270) Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 346 gcagtgatgaagaagaagaggaggaa 371
>gb|BC036281.1| Homo sapiens glutamate-rich WD repeat containing 1, mRNA (cDNA clone IMAGE:3920589) Length = 2228 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 346 gcagtgatgaagaagaagaggaggaa 371
>ref|XM_721940.1| Plasmodium yoelii yoelii str. 17XNL DNA repair protein RAD54 (PY00810) partial mRNA Length = 3494 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 500 atagtgacagcagcagtgatgaagaagaagaggaggaa 537 |||||||||||| | |||||||||||||||||||||| Sbjct: 2896 atagtgacagcacaaatgatgaagaagaagaggaggaa 2933
>gb|BC002440.2| Homo sapiens glutamate-rich WD repeat containing 1, mRNA (cDNA clone MGC:2600 IMAGE:3347366), complete cds Length = 2253 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 370 gcagtgatgaagaagaagaggaggaa 395
>emb|AL713729.1|HSM803104 Homo sapiens mRNA; cDNA DKFZp564C172 (from clone DKFZp564C172) Length = 2248 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 370 gcagtgatgaagaagaagaggaggaa 395
>emb|CR616744.1| full-length cDNA clone CS0DK002YJ07 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1860 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 353 gcagtgatgaagaagaagaggaggaa 378
>dbj|AK074676.1| Homo sapiens cDNA FLJ90195 fis, clone MAMMA1001310 Length = 2414 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 563 gcagtgatgaagaagaagaggaggaa 588
>gb|AF337808.1| Homo sapiens glutamate rich WD repeat protein (GRWD) mRNA, complete cds Length = 2240 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 374 gcagtgatgaagaagaagaggaggaa 399
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 30251 gcagtgatgaagaagaagaggaggaa 30276
>dbj|AB075822.1| Homo sapiens mRNA for KIAA1942 protein Length = 5549 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||||| Sbjct: 360 gcagtgatgaagaagaagaggaggaa 385
>gb|AC115784.9| Mus musculus chromosome 15, clone RP23-170J10, complete sequence Length = 212803 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaattaatgagga 548 ||||||||||||||||| ||||||||||| Sbjct: 129007 gaagaagaagaggaggacattaatgagga 129035
>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence Length = 217045 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaattaatgagga 548 ||||||||||||||||| ||||||||||| Sbjct: 2974 gaagaagaagaggaggacattaatgagga 3002
>ref|NM_004967.2| Homo sapiens integrin-binding sialoprotein (bone sialoprotein, bone sialoprotein II) (IBSP), mRNA Length = 1108 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||| Sbjct: 587 agtgatgaagaagaagaggaggaa 610
>gb|AC093768.3| Homo sapiens BAC clone RP11-113G13 from 4, complete sequence Length = 187624 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||| Sbjct: 42100 agtgatgaagaagaagaggaggaa 42123
>gb|J05213.1|HUMSIALO Homo sapiens sialoprotein precursor (IBSP) mRNA, complete cds Length = 1037 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||| Sbjct: 516 agtgatgaagaagaagaggaggaa 539
>gb|L24759.1|HUMBNSP04 Human bone sialoprotein (BNSP) gene, exons 6 and 7 Length = 4303 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||| Sbjct: 1492 agtgatgaagaagaagaggaggaa 1515
>gb|L09558.1|HUMSIALP05 Homo sapiens bone sialoprotein (BNSP) gene, exon 7 Length = 815 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 |||||||||||||||||||||||| Sbjct: 294 agtgatgaagaagaagaggaggaa 317
>gb|M74075.1|YSAADETRI Candida albicans adenosine triphosphatase (PMA1) gene, complete cds Length = 3251 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggaggaaa 538 |||||||||||||||||||||||| Sbjct: 453 gtgatgaagaagaagaggaggaaa 476
>gb|AF539999.1| Mamestra configurata nucleopolyhedrovirus A 90/4, complete genome Length = 153656 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 519 tgaagaagaagaggaggaaatta 541 ||||||||||||||||||||||| Sbjct: 52466 tgaagaagaagaggaggaaatta 52444
>gb|U59461.2|MBU59461 Mamestra configurata NPV-A strain 90/2, complete genome Length = 155060 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 519 tgaagaagaagaggaggaaatta 541 ||||||||||||||||||||||| Sbjct: 53870 tgaagaagaagaggaggaaatta 53848
>emb|AL162232.14| Human DNA sequence from clone RP11-20A20 on chromosome 9 Contains a novel gene, complete sequence Length = 64241 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 gctgacagtgatatggatagtga 506 ||||||||||||||||||||||| Sbjct: 14018 gctgacagtgatatggatagtga 14040
>gb|AF178650.3| Homo sapiens chromosome 8 clone CTB-402H9 map 8cen , complete sequence Length = 73382 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 482 aggctgacagtgatatggatagt 504 ||||||||||||||||||||||| Sbjct: 49070 aggctgacagtgatatggatagt 49092
>dbj|AP000379.1| Homo sapiens genomic DNA, chromosome 9p21, proximal p16CDKN2A locus Length = 169261 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 484 gctgacagtgatatggatagtga 506 ||||||||||||||||||||||| Sbjct: 35329 gctgacagtgatatggatagtga 35351
>ref|XM_341001.2| PREDICTED: Rattus norvegicus similar to type V P-type ATPase isoform 3 (LOC360728), mRNA Length = 3950 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 aggagctccagtttgatcccgag 264 ||||||||||||||||||||||| Sbjct: 3831 aggagctccagtttgatcccgag 3853
>gb|AC136365.5| Homo sapiens chromosome 8, clone RP11-97P4, complete sequence Length = 143756 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 482 aggctgacagtgatatggatagt 504 ||||||||||||||||||||||| Sbjct: 92701 aggctgacagtgatatggatagt 92723
>dbj|AP005902.2| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1582A10, complete sequence Length = 149577 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 482 aggctgacagtgatatggatagt 504 ||||||||||||||||||||||| Sbjct: 3393 aggctgacagtgatatggatagt 3371
>gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome 13, complete sequence Length = 187967 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaaa 538 |||||||||||||||||||||| Sbjct: 165436 gatgaagaagaagaggaggaaa 165457
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 38576 tgatgaagaagaagaggaggaa 38597
>gb|AC114640.11| Mus musculus chromosome 17, clone RP24-125I7, complete sequence Length = 190102 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 515 gtgatgaagaagaagaggagga 536 |||||||||||||||||||||| Sbjct: 143310 gtgatgaagaagaagaggagga 143289
>gb|BC077350.1| Xenopus laevis MGC81192 protein, mRNA (cDNA clone MGC:81192 IMAGE:6318409), complete cds Length = 4474 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 510 cagcagtgatgaagaagaagaggagg 535 ||||||||||||||| |||||||||| Sbjct: 2435 cagcagtgatgaagaggaagaggagg 2460
>gb|AC107747.8| Mus musculus chromosome 15, clone RP23-303J2, complete sequence Length = 199506 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 170354 tgatgaagaagaagaggaggaa 170375
>ref|XM_706206.1| Candida albicans SC5314 hypothetical protein (CaO19.6597), mRNA Length = 1176 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 729 tgatgaagaagaagaggaggaa 750
>emb|AL607065.5| Human DNA sequence from clone RP11-338F14 on chromosome 10, complete sequence Length = 31741 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaattaatga 545 |||||||||||||||||| ||||||| Sbjct: 9453 gaagaagaagaggaggaatttaatga 9478
>gb|AC158971.4| Mus musculus chromosome 15, clone RP24-204H21, complete sequence Length = 173184 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 8126 tgatgaagaagaagaggaggaa 8147
>gb|AC159655.8| Mus musculus 6 BAC RP24-559F15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200889 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggaggaaa 538 |||||||||||||||||||||| Sbjct: 24421 gatgaagaagaagaggaggaaa 24400
>gb|AC182680.2| Populus trichocarpa clone Pop1-30O8, complete sequence Length = 52678 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 521 aagaagaagaggaggaaattaatgag 546 ||||||||||||| |||||||||||| Sbjct: 37177 aagaagaagaggaagaaattaatgag 37202
>ref|XM_571735.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1225 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 966 tgatgaagaagaagaggaggaa 987
>gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, complete sequence Length = 239344 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaaa 538 |||||||||||||||||||||| Sbjct: 17202 gatgaagaagaagaggaggaaa 17223
>ref|NM_065750.3| Caenorhabditis elegans Y32H12A.8 (Y32H12A.8) mRNA, complete cds Length = 12021 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 3255 tgatgaagaagaagaggaggaa 3276
>gb|AC022267.8|AC022267 Homo sapiens BAC clone RP11-407H18 from 4, complete sequence Length = 199472 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 521 aagaagaagaggaggaaattaa 542 |||||||||||||||||||||| Sbjct: 189186 aagaagaagaggaggaaattaa 189165
>gb|AC096729.3| Homo sapiens BAC clone RP11-63M2 from 4, complete sequence Length = 161900 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 404 catggaattatattggtgttta 425 |||||||||||||||||||||| Sbjct: 92218 catggaattatattggtgttta 92239
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagga 536 |||||||||||||||||||||| Sbjct: 82839 gtgatgaagaagaagaggagga 82860
>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence Length = 170353 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 515 gtgatgaagaagaagaggagga 536 |||||||||||||||||||||| Sbjct: 11617 gtgatgaagaagaagaggagga 11596
>emb|AJ718371.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT43-4-330, cultivar Bright Yellow 2 Length = 273 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 215 tgatgaagaagaagaggaggaa 236
>gb|AC006733.2| Caenorhabditis elegans cosmid Y32H12A, complete sequence Length = 58777 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 51532 tgatgaagaagaagaggaggaa 51511
>emb|AL840625.9| Mouse DNA sequence from clone RP23-343F17 on chromosome 4, complete sequence Length = 164277 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggaggaa 537 |||||||||||||||||||||| Sbjct: 144969 tgatgaagaagaagaggaggaa 144948
>gb|AC161271.2| Mus musculus BAC clone RP23-59D8 from chromosome 14, complete sequence Length = 206083 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 99845 gatgaagaagaagaggaggaa 99865
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 170449 gatgaagaagaagaggaggaa 170429
>ref|XM_636081.1| Dictyostelium discoideum dynactin 150 kDa subunit (DDB0220487), partial mRNA Length = 4620 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaaattaatga 545 |||||||||||||| || ||||||||||| Sbjct: 1057 gatgaagaagaagaagaagaaattaatga 1085
>ref|XM_634137.1| Dictyostelium discoideum hypothetical protein (DDB0185354), partial mRNA Length = 6192 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 1513 gatgaagaagaagaggaggaa 1533
>gb|AC159266.3| Mus musculus BAC clone RP24-64D24 from chromosome 8, complete sequence Length = 212727 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 88045 gatgaagaagaagaggaggaa 88065
>ref|XM_508000.1| PREDICTED: Pan troglodytes similar to PGC-1 related co-activator (LOC450695), mRNA Length = 1200 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 1067 gcagtgatggagaagaagaggagga 1091
>gb|AC167405.5| Mus musculus chromosome 18, clone wi1-977A17, complete sequence Length = 41204 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 32281 gatgaagaagaagaggaggaa 32301
>gb|AC157610.2| Mus musculus chromosome 15, clone RP23-77H12, complete sequence Length = 164913 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 513 cagtgatgaagaagaagaggaggaa 537 |||||| |||||||||||||||||| Sbjct: 161009 cagtgaggaagaagaagaggaggaa 160985
>gb|AF000262.1| Caenorhabditis elegans cosmid C48E7, complete sequence Length = 37701 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 19540 gatgaagaagaagaggaggaa 19560
>gb|AC008228.5| Drosophila melanogaster clone BACR23E23, complete sequence Length = 162949 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagg 535 ||||||||||||||||||||| Sbjct: 146788 gtgatgaagaagaagaggagg 146808
>gb|AC010123.9| Drosophila melanogaster clone BACR35O22, complete sequence Length = 160444 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagg 535 ||||||||||||||||||||| Sbjct: 92875 gtgatgaagaagaagaggagg 92895
>gb|BC063829.1| Homo sapiens peroxisome proliferative activated receptor, gamma, coactivator-related 1, mRNA (cDNA clone MGC:74642 IMAGE:6526680), complete cds Length = 5168 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 734 gcagtgatggagaagaagaggagga 758
>ref|XM_617167.2| PREDICTED: Bos taurus similar to [Segment 1 of 2] Traf2 and NCK interacting kinase (LOC537013), mRNA Length = 714 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 506 acagcagcagtgatgaagaagaagaggag 534 ||||| ||||||| ||||||||||||||| Sbjct: 656 acagcggcagtgaggaagaagaagaggag 684
>ref|NM_009055.2| Mus musculus regulatory factor X, 1 (influences HLA class II expression) (Rfx1), mRNA Length = 4153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 2947 gatgaagaagaagaggaggaa 2967
>gb|BC063806.1| Homo sapiens peroxisome proliferative activated receptor, gamma, coactivator-related 1, mRNA (cDNA clone MGC:70989 IMAGE:6514597), complete cds Length = 5074 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 638 gcagtgatggagaagaagaggagga 662
>ref|XM_446401.1| Candida glabrata CBS138, CAGL0G00924g partial mRNA Length = 3591 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 1146 tgatgaagaagaagaggagga 1166
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete sequence Length = 157430 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 64480 tgatgaagaagaagaggagga 64500
>ref|XM_718990.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03867) partial mRNA Length = 1024 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 80 gatgaagaagaagaggaggaa 100
>ref|XM_719274.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04114) partial mRNA Length = 1452 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 1294 gatgaagaagaagaggaggaa 1314
>emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 in linkage group 16, complete sequence Length = 174132 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaaa 538 ||||||||||||||||||||| Sbjct: 46125 atgaagaagaagaggaggaaa 46145
>emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, complete sequence Length = 223119 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaaa 538 ||||||||||||||||||||| Sbjct: 31880 atgaagaagaagaggaggaaa 31860
>emb|AL500527.19| Human DNA sequence from clone RP11-302K17 on chromosome 10 Contains the gene for Hermansky-Pudlak syndrome-6 protein (HPS6), two pseudogenes for transcription elongation factor B (SIII), polypeptide 1, the LDB1 gene for LIM domain binding 1, a novel gene (KIAA0595), the NOLC1 gene for nucleolar and coiled-body phosphoprotein 1 and five CpG islands, complete sequence Length = 158434 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 80993 gcagtgatggagaagaagaggagga 81017
>ref|NM_015062.3| Homo sapiens peroxisome proliferative activated receptor, gamma, coactivator-related 1 (PPRC1), mRNA Length = 5354 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 767 gcagtgatggagaagaagaggagga 791
>ref|XM_785073.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA-binding protein 28 (RNA binding motif protein 28) (LOC585240), mRNA Length = 579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 432 tgatgaagaagaagaggagga 452
>emb|Y18666.1|MSUY18666 Mullus surmuletus mRNA for opsin Length = 1423 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cctccgtctcctccagctccg 40 ||||||||||||||||||||| Sbjct: 1031 cctccgtctcctccagctccg 1051
>emb|X76088.1|MMRFX1 M.musculus (BALB/c) MRFX1 mRNA Length = 3125 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 2883 gatgaagaagaagaggaggaa 2903
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 83215 tgatgaagaagaagaggagga 83195
>ref|NM_001006763.1| Xenopus tropicalis TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa (taf7), mRNA Length = 2063 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 agcagtgatgaagaagaagaggagg 535 |||||||||| |||||||||||||| Sbjct: 790 agcagtgatggagaagaagaggagg 814
>emb|AL034352.1|SPBC725 S.pombe chromosome II cosmid c725 Length = 37949 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 28296 tgatgaagaagaagaggagga 28276
>emb|BX321875.7| Zebrafish DNA sequence from clone CH211-254C8 in linkage group 16, complete sequence Length = 169994 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaaa 538 ||||||||||||||||||||| Sbjct: 103668 atgaagaagaagaggaggaaa 103688
>dbj|AK095248.1| Homo sapiens cDNA FLJ37929 fis, clone CTONG2002841 Length = 2995 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 730 gcagtgatggagaagaagaggagga 754
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 |||||||||||||||| |||||||| Sbjct: 1323316 gcagtgatgaagaagaggaggagga 1323340
>ref|NM_078727.2| Drosophila melanogaster asteroid CG4426-RA (ast), mRNA Length = 2719 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagg 535 ||||||||||||||||||||| Sbjct: 1296 gtgatgaagaagaagaggagg 1316
>dbj|AK147790.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270039P20 product:regulatory factor X, 1 (influences HLA class II expression), full insert sequence Length = 3681 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 3017 gatgaagaagaagaggaggaa 3037
>ref|XM_684404.1| PREDICTED: Danio rerio similar to Daxx protein (LOC561006), mRNA Length = 2736 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 1552 gatgaagaagaagaggaggaa 1572
>ref|XM_684648.1| PREDICTED: Danio rerio similar to KIAA1946 (LOC561242), mRNA Length = 5006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 340 tgatgaagaagaagaggagga 320
>gb|AC153625.2| Mus musculus 6 BAC RP23-277O13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 175711 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 31210 gatgaagaagaagaggaggaa 31190
>gb|AY052070.1| Drosophila melanogaster SD02572 full length cDNA Length = 2733 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagg 535 ||||||||||||||||||||| Sbjct: 1296 gtgatgaagaagaagaggagg 1316
>dbj|AK083571.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030046L06 product:regulatory factor (trans-acting) 1, full insert sequence Length = 4153 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 2947 gatgaagaagaagaggaggaa 2967
>gb|BC075555.1| Xenopus tropicalis TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa, mRNA (cDNA clone MGC:89504 IMAGE:6992483), complete cds Length = 2063 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 agcagtgatgaagaagaagaggagg 535 |||||||||| |||||||||||||| Sbjct: 790 agcagtgatggagaagaagaggagg 814
>ref|NM_059405.3| Caenorhabditis elegans LiPid Depleted family member (lpd-2) (lpd-2) mRNA, complete cds Length = 994 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 412 gatgaagaagaagaggaggaa 432
>gb|AF325193.1|AF325193 Homo sapiens PGC-1 related co-activator mRNA, complete cds Length = 5361 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 767 gcagtgatggagaagaagaggagga 791
>dbj|AK037226.1| Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched library, clone:A030011J15 product:regulatory factor (trans-acting) 1, full insert sequence Length = 3109 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 1919 gatgaagaagaagaggaggaa 1939
>ref|XM_624003.1| PREDICTED: Apis mellifera similar to ENSANGP00000013171 (LOC551612), mRNA Length = 3342 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 1309 gatgaagaagaagaggaggaa 1329
>ref|XM_396449.2| PREDICTED: Apis mellifera similar to ENSANGP00000010429 (LOC412998), mRNA Length = 3675 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 2234 tgatgaagaagaagaggagga 2214
>gb|AC107885.5| Homo sapiens chromosome 8, clone CTD-2552G2, complete sequence Length = 163298 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 147443 gatgaagaagaagaggaggaa 147463
>gb|AF047010.1|AF047010 Drosophila melanogaster asteroid protein (ast) gene, complete cds Length = 3177 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagg 535 ||||||||||||||||||||| Sbjct: 1747 gtgatgaagaagaagaggagg 1767
>emb|AL929243.7| Zebrafish DNA sequence from clone DKEYP-15G8, complete sequence Length = 159656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 50444 tgatgaagaagaagaggagga 50464
>emb|BX927188.11| Zebrafish DNA sequence from clone DKEY-264N13 in linkage group 19, complete sequence Length = 163213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 120060 gatgaagaagaagaggaggaa 120040
>gb|AE003587.4| Drosophila melanogaster chromosome 2L, section 4 of 83 of the complete sequence Length = 314549 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggagg 535 ||||||||||||||||||||| Sbjct: 159143 gtgatgaagaagaagaggagg 159163
>emb|CR761647.2| Xenopus tropicalis finished cDNA, clone TGas142n03 Length = 992 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 511 agcagtgatgaagaagaagaggagg 535 |||||||||| |||||||||||||| Sbjct: 796 agcagtgatggagaagaagaggagg 820
>gb|BC057018.1| Mus musculus regulatory factor X, 1 (influences HLA class II expression), mRNA (cDNA clone MGC:67125 IMAGE:5705637), complete cds Length = 4167 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 2955 gatgaagaagaagaggaggaa 2975
>gb|U76750.1|LPU76750 Lytechinus pictus mitotic apparatus protein p62 mRNA, complete cds Length = 3374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggaggaa 537 ||||||||||||||||||||| Sbjct: 1002 gatgaagaagaagaggaggaa 1022
>gb|AC101951.11| Mus musculus chromosome 1, clone RP24-153P16, complete sequence Length = 174693 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 gacagtgatatggatagtgac 507 ||||||||||||||||||||| Sbjct: 75621 gacagtgatatggatagtgac 75641
>gb|DQ268841.1| Solanum tuberosum clone 131G12 WD-40 repeat protein-like protein mRNA, complete cds Length = 1556 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 292 attgggtggccttgcttgagctttgatgt 320 ||||| |||||||||||||| |||||||| Sbjct: 231 attggctggccttgcttgagttttgatgt 259
>gb|AC155348.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH097M21, complete sequence Length = 131063 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagga 536 ||||||||||||||||||||| Sbjct: 78945 tgatgaagaagaagaggagga 78925
>dbj|AB011167.2| Homo sapiens mRNA for KIAA0595 protein, partial cds Length = 5297 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggagga 536 ||||||||| ||||||||||||||| Sbjct: 735 gcagtgatggagaagaagaggagga 759
>ref|NM_116518.3| Arabidopsis thaliana unknown protein AT4G02840 mRNA, complete cds Length = 683 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaaatta 541 ||||||||||||||||| |||||| Sbjct: 90 atgaagaagaagaggagaaaatta 67
>ref|XM_632706.1| Dictyostelium discoideum hypothetical protein (DDB0186872), partial mRNA Length = 2571 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 2151 tgatgaagaagaagaggagg 2132
>ref|XM_632585.1| Dictyostelium discoideum hypothetical protein (DDB0187005), partial mRNA Length = 2724 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 1910 atgaagaagaagaggaggaa 1929
>ref|XM_632264.1| Dictyostelium discoideum hypothetical protein (DDB0187301), partial mRNA Length = 1848 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggaggaaat 539 |||||||||||||||||| ||||| Sbjct: 1458 tgatgaagaagaagaggaagaaat 1481
>ref|XM_637027.1| Dictyostelium discoideum hypothetical protein (DDB0204418), partial mRNA Length = 6198 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 6110 atgaagaagaagaggaggaa 6129
>ref|XM_635505.1| Dictyostelium discoideum hypothetical protein (DDB0204625), partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 404 atgaagaagaagaggaggaa 423
>ref|XM_631264.1| Dictyostelium discoideum hypothetical protein (DDB0188326), partial mRNA Length = 2406 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggaggaaat 539 |||||||||||||||||| ||||| Sbjct: 2277 tgatgaagaagaagaggaagaaat 2254
>gb|AC166815.6| Mus musculus chromosome 18, clone RP23-373L14, complete sequence Length = 137949 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gaagaagaggaggaaattaa 542 |||||||||||||||||||| Sbjct: 78806 gaagaagaggaggaaattaa 78825
>ref|XM_526631.1| PREDICTED: Pan troglodytes similar to Bone sialoprotein II precursor (BSP II) (Cell-binding sialoprotein) (Integrin-binding sialoprotein) (LOC471249), mRNA Length = 954 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 |||||||||||||| ||||||||| Sbjct: 445 agtgatgaagaagaggaggaggaa 468
>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete sequence Length = 98527 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaaatta 541 ||||||||||||||||| |||||| Sbjct: 61806 atgaagaagaagaggagaaaatta 61783
>ref|XM_513403.1| PREDICTED: Pan troglodytes nardilysin (N-arginine dibasic convertase) (LOC456852), mRNA Length = 3947 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 731 tgatgaagaagaagaggagg 750
>ref|NM_002525.1| Homo sapiens nardilysin (N-arginine dibasic convertase) (NRD1), mRNA Length = 3851 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 561 tgatgaagaagaagaggagg 580
>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0010H19, complete sequence Length = 162902 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 141094 agtgatgaagaagaagagga 141113
>gb|AC112970.18| Mus musculus chromosome 17, clone RP24-443D19, complete sequence Length = 172747 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 4778 gatgaagaagaagaggagga 4759
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 ataccatcttcaaaagttgaggctgaca 490 ||||||||||||||||| ||||| |||| Sbjct: 26209 ataccatcttcaaaagtagaggcagaca 26182
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 1410336 gatgaagaagaagaggagga 1410317 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 1185120 gatgaagaagaagaggagga 1185139
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 gtgatgaagaagaagaggag 534 |||||||||||||||||||| Sbjct: 96003 gtgatgaagaagaagaggag 95984
>gb|AC119406.6| Trypanosoma brucei chromosome 8 clone RPCI93-28L1, complete sequence Length = 134874 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 89808 gatgaagaagaagaggagga 89827
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 1016815 gatgaagaagaagaggagga 1016834
>gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome 12, complete sequence Length = 145113 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 131688 gatgaagaagaagaggagga 131669
>gb|AY648773.1| Danio rerio KIAA0682-like mRNA, complete cds Length = 2927 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 2155 atgaagaagaagaggaggaa 2174
>gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, complete sequence Length = 164820 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 61756 gatgaagaagaagaggagga 61737
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 203692 gatgaagaagaagaggagga 203673
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 74877 agtgatgaagaagaagagga 74896
>ref|XM_422346.1| PREDICTED: Gallus gallus similar to bromodomain-containing female sterile homeotic-like protein (LOC424506), mRNA Length = 4272 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 agtgacagcagcagtgatga 521 |||||||||||||||||||| Sbjct: 2293 agtgacagcagcagtgatga 2312
>ref|XM_459577.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E06633g) partial mRNA Length = 1782 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 712 gatgaagaagaagaggagga 731
>gb|AC114342.12| Mus musculus chromosome 5, clone RP24-143H14, complete sequence Length = 171509 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 46667 gatgaagaagaagaggagga 46686
>ref|NM_007911.3| Mus musculus ephrin B3 (Efnb3), mRNA Length = 3126 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gggcaagggagcgaagaagg 154 |||||||||||||||||||| Sbjct: 56 gggcaagggagcgaagaagg 37
>ref|XM_956861.1| Neurospora crassa OR74A hypothetical protein (NCU08653.1) partial mRNA Length = 264 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 40 gatgaagaagaagaggagga 59
>ref|XM_958982.1| Neurospora crassa OR74A hypothetical protein (NCU02793.1) partial mRNA Length = 32463 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tgaagaagaagaggaggaaa 538 |||||||||||||||||||| Sbjct: 18696 tgaagaagaagaggaggaaa 18677
>gb|AC068459.9| Mus musculus chromosome 12, clone RP23-158M23, complete sequence Length = 198494 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 6131 gatgaagaagaagaggagga 6112
>ref|XM_329776.1| Neurospora crassa OR74A hypothetical protein (NCU08653.1) partial mRNA Length = 264 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 40 gatgaagaagaagaggagga 59
>ref|XM_329980.1| Neurospora crassa OR74A hypothetical protein (NCU02793.1) partial mRNA Length = 32463 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tgaagaagaagaggaggaaa 538 |||||||||||||||||||| Sbjct: 18696 tgaagaagaagaggaggaaa 18677
>ref|XM_713853.1| Candida albicans SC5314 putative nuclear localization sequence binding protein Nsr1p (CaO19_13509), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 cagcagtgatgaagaagaag 529 |||||||||||||||||||| Sbjct: 192 cagcagtgatgaagaagaag 211
>ref|XM_713852.1| Candida albicans SC5314 hypothetical protein (CaO19_13507), mRNA Length = 609 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 cagcagtgatgaagaagaag 529 |||||||||||||||||||| Sbjct: 408 cagcagtgatgaagaagaag 389
>ref|XM_713957.1| Candida albicans SC5314 putative nuclear localization sequence binding protein Nsr1p (CaO19_6090), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 cagcagtgatgaagaagaag 529 |||||||||||||||||||| Sbjct: 192 cagcagtgatgaagaagaag 211
>ref|XM_713956.1| Candida albicans SC5314 hypothetical protein (CaO19_6088), mRNA Length = 609 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 510 cagcagtgatgaagaagaag 529 |||||||||||||||||||| Sbjct: 408 cagcagtgatgaagaagaag 389
>ref|XM_712666.1| Candida albicans SC5314 adenosine triphosphatase (CaO19_5383), mRNA Length = 2688 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggaggaaa 538 |||||||||||||||| ||||||| Sbjct: 110 gtgatgaagaagaagaagaggaaa 133
>ref|XM_712572.1| Candida albicans SC5314 adenosine triphosphatase (CaO19_12838), mRNA Length = 2688 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 gtgatgaagaagaagaggaggaaa 538 |||||||||||||||| ||||||| Sbjct: 110 gtgatgaagaagaagaagaggaaa 133
>ref|XM_709404.1| Candida albicans SC5314 hypothetical protein (CaO19.11087), mRNA Length = 1134 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 130 gatgaagaagaagaggagga 149
>gb|AC142406.2| Mus musculus BAC clone RP24-531P16 from chromosome 9, complete sequence Length = 169938 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 81465 atgaagaagaagaggaggaa 81446
>gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome 18, complete sequence Length = 188380 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 523 gaagaagaggaggaaattaa 542 |||||||||||||||||||| Sbjct: 162494 gaagaagaggaggaaattaa 162513
>ref|XM_454635.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E15268g predicted mRNA Length = 1626 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgacagcagcagtgatgaagaaga 527 |||||| ||||||||||||||||| Sbjct: 33 tgacagtagcagtgatgaagaaga 56
>gb|BT014278.1| Lycopersicon esculentum clone 133509R, mRNA sequence Length = 1174 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gaagaggaggaaattaatga 545 |||||||||||||||||||| Sbjct: 69 gaagaggaggaaattaatga 50
>gb|BC047849.1| Danio rerio alpha thalassemia/mental retardation syndrome X-linked, like, mRNA (cDNA clone IMAGE:5601573), partial cds Length = 3187 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 513 cagtgatgaagaagaagaggagga 536 ||||||||||||||| |||||||| Sbjct: 2501 cagtgatgaagaagaggaggagga 2524
>gb|AY299514.1| Danio rerio nil per os (npo) mRNA, complete cds Length = 3257 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 2051 atgaagaagaagaggaggaa 2070
>ref|NM_198915.1| Danio rerio RNA binding motif protein 19 (rbm19), mRNA Length = 3257 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 2051 atgaagaagaagaggaggaa 2070
>gb|AC166819.2| Mus musculus BAC clone RP24-492L15 from chromosome 6, complete sequence Length = 199206 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 60253 gatgaagaagaagaggagga 60272
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 34054644 gatgaagaagaagaggagga 34054625 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 33335297 gatgaagaagaagaggagga 33335278
>gb|AF047659.1| Caenorhabditis elegans cosmid K07H8, complete sequence Length = 37923 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 28700 gatgaagaagaagaggagga 28681
>gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromosome 7, complete sequence Length = 157720 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 ||||||||||| |||||||||||| Sbjct: 30943 agtgatgaagaggaagaggaggaa 30966
>ref|XM_846356.1| PREDICTED: Canis familiaris similar to integrin-binding sialoprotein precursor (LOC609146), mRNA Length = 1040 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 537 agtgatgaagaagaagagga 556
>gb|AC073140.5| Homo sapiens BAC clone RP11-731B4 from 7, complete sequence Length = 137990 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 gaaggctggcaagtccaagt 127 |||||||||||||||||||| Sbjct: 107979 gaaggctggcaagtccaagt 107960
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 91813 gatgaagaagaagaggagga 91794
>ref|XM_535436.2| PREDICTED: Canis familiaris similar to yeast INO80-like protein, transcript variant 1 (LOC478262), mRNA Length = 4937 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 745 atgaagaagaagaggaggaa 764
>ref|XM_853071.1| PREDICTED: Canis familiaris similar to yeast INO80-like protein, transcript variant 4 (LOC478262), mRNA Length = 5132 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 745 atgaagaagaagaggaggaa 764
>ref|XM_844090.1| PREDICTED: Canis familiaris similar to yeast INO80-like protein, transcript variant 3 (LOC478262), mRNA Length = 6386 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 745 atgaagaagaagaggaggaa 764
>ref|XM_820668.1| Trypanosoma brucei TREU927 clone RPCI93-28L1 hypothetical protein (Tb927.8.3410) partial mRNA Length = 4557 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 448 gatgaagaagaagaggagga 467
>emb|CR450831.4| Zebrafish DNA sequence from clone CH211-79O8 in linkage group 11, complete sequence Length = 190163 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 161078 gatgaagaagaagaggagga 161059
>emb|AJ699408.1| Nipponia nippon microsatellite DNA, locus NnCG3, clone CG03 Length = 334 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 223 gatgaagaagaagaggagga 204
>ref|XM_533043.2| PREDICTED: Canis familiaris similar to acidic (leucine-rich) nuclear phosphoprotein 32 family, member E (LOC475834), mRNA Length = 1646 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 901 atgaagaagaagaggaggaa 920
>ref|XM_570059.1| Cryptococcus neoformans var. neoformans JEC21 heat shock protein HSP60 (CND05160) partial mRNA Length = 1855 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 1613 gatgaagaagaagaggagga 1632
>ref|XM_570129.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND04260) partial mRNA Length = 3852 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 877 gatgaagaagaagaggagga 896
>gb|AC127677.4| Mus musculus BAC clone RP24-226C2 from chromosome 8, complete sequence Length = 167913 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 463 ataccatcttcaaaagttgaggctgaca 490 ||||||||||||||||| ||||| |||| Sbjct: 90084 ataccatcttcaaaagtagaggcagaca 90057
>gb|AC141430.3| Mus musculus BAC clone RP23-95O14 from chromosome 5, complete sequence Length = 208771 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 gaagaggaggaaattaatga 545 |||||||||||||||||||| Sbjct: 151953 gaagaggaggaaattaatga 151934
>gb|AC140436.3| Mus musculus BAC clone RP23-85O2 from chromosome 9, complete sequence Length = 142560 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 4013 atgaagaagaagaggaggaa 3994
>gb|AC124352.2| Mus musculus BAC clone RP24-477C23 from chromosome 9, complete sequence Length = 177886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 39622 atgaagaagaagaggaggaa 39603
>gb|AC127559.6| Mus musculus BAC clone RP24-255M7 from chromosome 6, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tcaggctgaaaaggctccatggaa 410 |||||||||| ||||||||||||| Sbjct: 90143 tcaggctgaagaggctccatggaa 90166
>gb|AC087778.3| Pan troglodytes clone RP43-176J10, complete sequence Length = 63176 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 agtgatgaagaagaagaggaggaa 537 ||||||||||| |||||||||||| Sbjct: 29078 agtgatgaagaggaagaggaggaa 29055
>gb|AC091754.4| Papio anubis clone RP41-384C24, complete sequence Length = 192273 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 agtgatgaagaagaagaggaggaa 537 ||||||||||| |||||||||||| Sbjct: 138311 agtgatgaagaggaagaggaggaa 138288
>ref|XM_647784.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (102.t00006) partial mRNA Length = 816 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 773 atgaagaagaagaggaggaa 792
>gb|AC099593.6| Mus musculus chromosome 10, clone RP23-447D24, complete sequence Length = 176068 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 26722 atgaagaagaagaggaggaa 26741
>ref|XM_947891.1| Theileria annulata strain Ankara transcription modulator (TA07800) partial mRNA Length = 3081 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 2893 agtgatgaagaagaagagga 2912
>gb|BC008775.2| Homo sapiens nardilysin (N-arginine dibasic convertase), mRNA (cDNA clone MGC:2024 IMAGE:3138712), complete cds Length = 3616 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 525 tgatgaagaagaagaggagg 544
>gb|AC144431.11| Medicago truncatula clone mth2-21i14, complete sequence Length = 154482 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 aagaagaggaggaaattaat 543 |||||||||||||||||||| Sbjct: 99538 aagaagaggaggaaattaat 99557
>gb|AY360265.1| Homo sapiens nardilysin isoform (NRD1) mRNA, complete cds Length = 3410 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 122 tgatgaagaagaagaggagg 141
>emb|AL589663.19| Human DNA sequence from clone RP11-470H9 on chromosome 1 Contains the 5' end of the NRD1 gene for nardilysin (N-arginine dibasic convertase), a C1orf19 pseudogene and the 3' end of the RAB3B gene for RAB3B member RAS oncogene family, complete sequence Length = 104941 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 10060 tgatgaagaagaagaggagg 10041
>emb|AL359532.26| Human DNA sequence from clone RP11-330O11 on chromosome 10 Contains the 3' end of the gene for a novel protein (LOC220929) (FLJ32761), a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene and a CpG island, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 11192 gatgaagaagaagaggagga 11211
>emb|AL358949.16| Human DNA sequence from clone RP11-302K6 on chromosome 10 Contains part of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3), complete sequence Length = 166563 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 atagtgacagcagcagtgat 519 |||||||||||||||||||| Sbjct: 40764 atagtgacagcagcagtgat 40783
>emb|AL356111.13| Human DNA sequence from clone RP11-501G6 on chromosome 13 Contains a novel gene, complete sequence Length = 150955 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 512 gcagtgatgaagaagaagaggaggaaat 539 ||||| |||||||| ||||||||||||| Sbjct: 19838 gcagtaatgaagaaaaagaggaggaaat 19865
>emb|AL354811.13| Human DNA sequence from clone RP11-632L2 on chromosome 13 Contains a novel gene, the 5' end of the GPC6 gene for glypican 6 and a CpG island, complete sequence Length = 181567 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 aagaaggctggcaagtccaa 125 |||||||||||||||||||| Sbjct: 49152 aagaaggctggcaagtccaa 49171
>emb|AL161908.13| Human DNA sequence from clone RP11-123K19 on chromosome 9 Contains two novel genes, the 5' end of the LMX1B gene for LIM homeobox transcription factor 1 beta and two CpG islands, complete sequence Length = 106216 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 35561 atgaagaagaagaggaggaa 35580
>emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on chromosome 9q33.1-34.12 Contains three novel genes, the 3' end of the LHX2 gene for LIM homeobox protein 2 and four CpG islands, complete sequence Length = 221887 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 175114 gatgaagaagaagaggagga 175095
>emb|AL157832.14| Human DNA sequence from clone RP11-109A6 on chromosome 10 Contains the 3' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase and three novel genes, complete sequence Length = 130192 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aagaaggctggcaagtccaa 125 |||||||||||||||||||| Sbjct: 2784 aagaaggctggcaagtccaa 2765
>gb|AC163089.3| Mus musculus chromosome 5, clone RP23-346P15, complete sequence Length = 197826 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 128302 gatgaagaagaagaggagga 128321
>emb|CR377214.13| Zebrafish DNA sequence from clone CH211-261F19 in linkage group 6, complete sequence Length = 181635 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 177246 atgaagaagaagaggaggaa 177227
>ref|XM_963695.1| PREDICTED: Tribolium castaneum similar to CG8677-PA (LOC657224), mRNA Length = 6921 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaat 539 |||||||||||||||||||| Sbjct: 4183 gaagaagaagaggaggaaat 4202
>ref|XM_793453.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7338-PA (LOC594000), mRNA Length = 1008 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 964 agtgatgaagaagaagagga 983
>emb|Z99091.2|SPAC13F5 S.pombe chromosome I cosmid c13F5 Length = 15093 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 agtgatgaagaagaagaggaggaa 537 ||||| |||||||||||||||||| Sbjct: 1297 agtgaagaagaagaagaggaggaa 1274
>emb|X73541.1|SCDNACHXI S.cerevisiae DNA of chromosome XI, right arm Length = 15820 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 3045 gatgaagaagaagaggagga 3064
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 484861 gatgaagaagaagaggagga 484842
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 504 tgacagcagcagtgatgaagaaga 527 |||||| ||||||||||||||||| Sbjct: 1353264 tgacagtagcagtgatgaagaaga 1353287
>emb|AL596096.7| Mouse DNA sequence from clone RP23-42P20 on chromosome 11 Contains the 5' end of the Alox12e gene for epidermal arachidonate lipoxygenase, the gene for arachidonate 15-lipoxygenase, a novel pseudogene, two genes for novel proteins (4930563C04Rik, 1110030J09Rik), a Mitochondrial 28S ribosomal protein pseudogene, a NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 (Ndufb8) pseudogene, the gene for a novel protein similar to Beta-arrestin 2 (Arrestin, beta 2) (LOC216869), the Cxcl16 gene for chemokine (C-X-C motif) ligand 16, the gene for a novel protein similar to human zinc finger MYND domain containg 15 (ZMYND15), the 5' end of the gene for a novel protein (2010003F10Rik) and three CpG islands, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 cagcagtgatgaagaagaagaggaggaa 537 ||||||||||||||| || ||||||||| Sbjct: 76952 cagcagtgatgaagaggaggaggaggaa 76925
>emb|AL731687.13| Mouse DNA sequence from clone RP23-56I20 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to dynein, the Efnb3 gene for ephrin B3, a novel gene, the Trp53 gene for transformation related protein 53, the Atp1b2 gene for Na+/K+ transporting ATPase beta 2 polypeptide, the Shbg gene for sex hormone binding globulin, the 5' end of the Sat2 gene for spermidine/spermine N1-acetyl transferase 2 and two CpG islands, complete sequence Length = 116898 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gggcaagggagcgaagaagg 154 |||||||||||||||||||| Sbjct: 54251 gggcaagggagcgaagaagg 54270
>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence Length = 221791 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 164626 atgaagaagaagaggaggaa 164645
>gb|AC163031.5| Mus musculus BAC clone RP24-146A18 from chromosome 6, complete sequence Length = 149473 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 146363 gatgaagaagaagaggagga 146382
>gb|AC159634.2| Mus musculus BAC clone RP24-127K13 from chromosome 12, complete sequence Length = 146684 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaattaat 543 ||||||||||||||||||| |||| Sbjct: 87049 gaagaagaagaggaggaaactaat 87072
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaat 539 |||||||||||||||||||| Sbjct: 73376 gaagaagaagaggaggaaat 73395
>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7 Length = 199615 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaaatta 541 ||||||||||||||||| |||||| Sbjct: 110476 atgaagaagaagaggagaaaatta 110453
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 81453 atgaagaagaagaggaggaa 81472
>emb|AJ849377.1| Lycopersicon esculentum mRNA for 1,4-alpha-glucan-maltohydrolase (bmy3 gene) Length = 1920 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 236 gatgaagaagaagaggagga 217
>gb|BC096878.1| Danio rerio wu:fc23g05, mRNA (cDNA clone IMAGE:7240775), partial cds Length = 2486 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 tgaagaagaagaggaggaaa 538 |||||||||||||||||||| Sbjct: 964 tgaagaagaagaggaggaaa 983
>gb|BC058617.1| Mus musculus ephrin B3, mRNA (cDNA clone MGC:64741 IMAGE:5695418), complete cds Length = 3135 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gggcaagggagcgaagaagg 154 |||||||||||||||||||| Sbjct: 47 gggcaagggagcgaagaagg 28
>emb|CR457482.5| Zebrafish DNA sequence from clone CH211-159P3 in linkage group 15, complete sequence Length = 158288 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 59293 gatgaagaagaagaggagga 59312
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 gacagcagcagtgatgaaga 524 |||||||||||||||||||| Sbjct: 5321255 gacagcagcagtgatgaaga 5321236
>emb|CR861272.1| Pongo pygmaeus mRNA; cDNA DKFZp459N143 (from clone DKFZp459N143) Length = 4082 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 547 tgatgaagaagaagaggagg 566
>gb|AY011012.1| Elymus californicus clone 1d2 granule-bound starch synthase (GBSSI) gene, exons 9 through 14, partial cds Length = 1236 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 gaagaagaagaggaggaaat 539 |||||||||||||||||||| Sbjct: 166 gaagaagaagaggaggaaat 147
>gb|AC154602.3| Mus musculus BAC clone RP23-343M11 from chromosome 17, complete sequence Length = 196564 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 52963 atgaagaagaagaggaggaa 52944
>gb|DQ374057.1| Beta vulgaris chromosome 9 clone BAC132 genomic sequence Length = 7612 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 ctgacagtgatatggatagt 504 |||||||||||||||||||| Sbjct: 172 ctgacagtgatatggatagt 191
>emb|BX548077.12| Zebrafish DNA sequence from clone DKEY-11A7 in linkage group 17, complete sequence Length = 242711 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 tatggatagtgacagcagca 514 |||||||||||||||||||| Sbjct: 99749 tatggatagtgacagcagca 99730
>dbj|AK128966.1| Mus musculus cDNA fis, clone TRACH3013766 Length = 3466 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 510 cagcagtgatgaagaagaagaggaggaa 537 ||||||||||||||| || ||||||||| Sbjct: 2686 cagcagtgatgaagaggaggaggaggaa 2713
>dbj|AK055516.1| Homo sapiens cDNA FLJ30954 fis, clone HCASM2000138, highly similar to NARDILYSIN PRECURSOR (EC 3.4.24.61) Length = 3146 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 tgatgaagaagaagaggagg 535 |||||||||||||||||||| Sbjct: 25 tgatgaagaagaagaggagg 44
>emb|BX571850.7| Zebrafish DNA sequence from clone DKEY-259L18 in linkage group 23, complete sequence Length = 236136 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 cagcagtgatgaagaagaagagga 533 |||||||||||||||| ||||||| Sbjct: 139847 cagcagtgatgaagaacaagagga 139824
>ref|XM_680872.1| PREDICTED: Danio rerio similar to mKIAA1626 protein (LOC557752), mRNA Length = 5676 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 4927 gatgaagaagaagaggagga 4946
>ref|XM_690773.1| PREDICTED: Danio rerio similar to protein phosphatase 4, regulatory subunit 2 (LOC567477), mRNA Length = 2486 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 tgaagaagaagaggaggaaa 538 |||||||||||||||||||| Sbjct: 987 tgaagaagaagaggaggaaa 1006
>emb|BX119974.5| Zebrafish DNA sequence from clone DKEY-237J17 in linkage group 6, complete sequence Length = 213058 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 tgaagaagaagaggaggaaa 538 |||||||||||||||||||| Sbjct: 91315 tgaagaagaagaggaggaaa 91334
>gb|S73144.1| bone sialoprotein [cattle, fetal bone cells, mRNA, 1037 nt] Length = 1037 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 508 agtgatgaagaagaagagga 527
>ref|NM_001019082.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC13F5.02c), partial mRNA Length = 1182 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagaggaggaa 537 ||||| |||||||||||||||||| Sbjct: 928 agtgaagaagaagaagaggaggaa 951
>gb|AC027347.5|AC027347 Homo sapiens chromosome 5 clone CTD-2562I21, complete sequence Length = 148193 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 23323 atgaagaagaagaggaggaa 23304
>ref|NM_068990.2| Caenorhabditis elegans K07H8.10 (K07H8.10) mRNA, complete cds Length = 2694 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 1313 gatgaagaagaagaggagga 1332
>dbj|AK005027.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300017A15 product:hypothetical Proline-rich region containing protein, full insert sequence Length = 3435 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 510 cagcagtgatgaagaagaagaggaggaa 537 ||||||||||||||| || ||||||||| Sbjct: 2684 cagcagtgatgaagaggaggaggaggaa 2711
>dbj|AK048305.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130048B01 product:m-ephrin-B3 mRNA, full insert sequence Length = 3126 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gggcaagggagcgaagaagg 154 |||||||||||||||||||| Sbjct: 56 gggcaagggagcgaagaagg 37
>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence Length = 182140 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 37103 gatgaagaagaagaggagga 37122
>dbj|AK078677.1| Mus musculus adult male eyeball cDNA, RIKEN full-length enriched library, clone:7530404F24 product:unclassifiable, full insert sequence Length = 3723 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 3694 gatgaagaagaagaggagga 3713
>emb|BX640587.7| Zebrafish DNA sequence from clone CH211-194J9 in linkage group 6, complete sequence Length = 192743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tgaagaagaagaggaggaaa 538 |||||||||||||||||||| Sbjct: 26595 tgaagaagaagaggaggaaa 26576
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaat 539 |||||||||||||||||||| Sbjct: 5097103 gaagaagaagaggaggaaat 5097122
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 gaagaagaagaggaggaaat 539 |||||||||||||||||||| Sbjct: 29645167 gaagaagaagaggaggaaat 29645186
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 agtgatgaagaagaagagga 533 |||||||||||||||||||| Sbjct: 10458061 agtgatgaagaagaagagga 10458080
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 34145116 gatgaagaagaagaggagga 34145097 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 33425807 gatgaagaagaagaggagga 33425788
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 gaagaagaagaggaggaaat 539 |||||||||||||||||||| Sbjct: 7248611 gaagaagaagaggaggaaat 7248592
>ref|XM_624995.1| PREDICTED: Apis mellifera similar to ENSANGP00000020325 (LOC552621), mRNA Length = 1851 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 1237 gatgaagaagaagaggagga 1256
>gb|AC130460.2| Homo sapiens chromosome 16 clone CTA-485G10, complete sequence Length = 135347 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaa 537 |||||||||||||||||||| Sbjct: 36217 atgaagaagaagaggaggaa 36198
>emb|BX829208.1|CNS0A2MF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 543 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 atgaagaagaagaggaggaaatta 541 ||||||||||||||||| |||||| Sbjct: 41 atgaagaagaagaggagaaaatta 18
>gb|AC110766.5| Homo sapiens BAC clone RP11-93M12 from 4, complete sequence Length = 169442 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 12018 gatgaagaagaagaggagga 11999
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 gatgaagaagaagaggagga 536 |||||||||||||||||||| Sbjct: 18456 gatgaagaagaagaggagga 18437 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,213,178 Number of Sequences: 3902068 Number of extensions: 6213178 Number of successful extensions: 181561 Number of sequences better than 10.0: 293 Number of HSP's better than 10.0 without gapping: 293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 179880 Number of HSP's gapped (non-prelim): 1650 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
